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Conserved domains on  [gi|581788122|gb|EVR91326|]
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iron compound ABC transporter, permease [Staphylococcus aureus M1472]

Protein Classification

FecCD family ABC transporter permease( domain architecture ID 10001816)

FecCD family ABC transporter permease such as iron ABC transporter permease, which is the transmembrane subunit (TM) found in a periplasmic binding protein (PBP)-dependent ATP-binding cassette (ABC) transporter involved in the import of iron and iron-containing compounds

CATH:  1.10.3470.10
Gene Ontology:  GO:0140359|GO:0042626
PubMed:  25750732|24638992
SCOP:  4002900
TCDB:  3.A.1

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FepD COG0609
ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and ...
 38-323 2.09e-61

ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism];


:

Pssm-ID: 440374  Cd Length: 306  Bit Score: 197.99  E-value: 2.09e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  38 LGDINDVFNQSILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFG--SGLALFLGLTTLWIPVF 115
Cdd:COG0609   19 LGPDGDPTADLIVWDLRLPRVLLALLVGAALAVAGALMQGLTRNPLADPGILGVSSGAALGavLAIVLGGGLSALGLPLA 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 116 SITFSLITLITVLVITSVLSQGYPVRiLILSGLMIGALFNSLLYFLILL-KPRKLNTIANYLFGGFGDAEYSNVSIIAIT 194
Cdd:COG0609   99 AFLGALLAALLVYLLARRGGGLSPLR-LVLAGVAVSALFSALTSLLLLLaDPEQLRSIVFWLMGSLAGASWDDVLLLLPV 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 195 FIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRKWqWKQSLGRQ 274
Cdd:COG0609  178 LLIGLLLALLLARALNALALGDETARSLGVNVERLRLLLLLLAALLTGAAVAVAGPIGFVGLVVPHIARLL-VGPDHRRL 256

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 581788122 275 LALNIVIGGQIMVMADFIGSHILSPVQIPASIIIALIGIPVLFYMLISQ 323
Cdd:COG0609  257 LPASALLGALLLLLADTLARTILAPAELPVGIVTALIGAPFFLYLLRRR 305
 
Name Accession Description Interval E-value
FepD COG0609
ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and ...
 38-323 2.09e-61

ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440374  Cd Length: 306  Bit Score: 197.99  E-value: 2.09e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  38 LGDINDVFNQSILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFG--SGLALFLGLTTLWIPVF 115
Cdd:COG0609   19 LGPDGDPTADLIVWDLRLPRVLLALLVGAALAVAGALMQGLTRNPLADPGILGVSSGAALGavLAIVLGGGLSALGLPLA 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 116 SITFSLITLITVLVITSVLSQGYPVRiLILSGLMIGALFNSLLYFLILL-KPRKLNTIANYLFGGFGDAEYSNVSIIAIT 194
Cdd:COG0609   99 AFLGALLAALLVYLLARRGGGLSPLR-LVLAGVAVSALFSALTSLLLLLaDPEQLRSIVFWLMGSLAGASWDDVLLLLPV 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 195 FIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRKWqWKQSLGRQ 274
Cdd:COG0609  178 LLIGLLLALLLARALNALALGDETARSLGVNVERLRLLLLLLAALLTGAAVAVAGPIGFVGLVVPHIARLL-VGPDHRRL 256

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 581788122 275 LALNIVIGGQIMVMADFIGSHILSPVQIPASIIIALIGIPVLFYMLISQ 323
Cdd:COG0609  257 LPASALLGALLLLLADTLARTILAPAELPVGIVTALIGAPFFLYLLRRR 305
FecCD pfam01032
FecCD transport family; This is a sub-family of bacterial binding protein-dependent transport ...
 38-321 4.37e-48

FecCD transport family; This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.


Pssm-ID: 426003  Cd Length: 311  Bit Score: 163.85  E-value: 4.37e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122   38 LGDINDVFNQSILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFGS--GLALFLGLTTLWIPVF 115
Cdd:pfam01032  26 LLGGDDSLAALIVLDLRLPRVLAALLVGAALAVSGALLQTVTRNPLADPSILGISSGAALGAvlAILLGGSLSLFALPLA 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  116 SITFSLITLITVLVITSVLSQGYPVRiLILSGLMIGALFNSLLYFLILLK-PRKLNTIANYLFGGFGDAEYSNVSIIAIT 194
Cdd:pfam01032 106 AFIGALLAALLVYFLSRGRGGASPLR-LILAGIAVSALLSALTSLLLLLLnPEALQSILFWLMGSLSGANWSDVLILLPL 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  195 FIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRKWQwKQSLGRQ 274
Cdd:pfam01032 185 LLIGLILLLLLARKLNLLSLGDDTAKSLGVNVNRVRLLLLLLASLLTAASVAVVGPIGFVGLIVPHIARLLV-GANHRRL 263

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 581788122  275 LALNIVIGGQIMVMADFIGSHILSPVQIPASIIIALIGIPVLFYMLI 321
Cdd:pfam01032 264 LPLSALLGALLLLLADILARTILSPYELPVGIVTALIGAPFFIYLLL 310
PRK10577 PRK10577
Fe(3+)-hydroxamate ABC transporter permease FhuB;
18-326 4.11e-36

Fe(3+)-hydroxamate ABC transporter permease FhuB;


Pssm-ID: 236720 [Multi-domain]  Cd Length: 668  Bit Score: 137.66  E-value: 4.11e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  18 VLLSWIVILIITTSIYLFwqLGDINDVFN------QSILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGL 91
Cdd:PRK10577 357 WLLALGLLLLLALVVALS--FGRDAHGWNwlsgqlLDALLPLRLPRLLAALLAGAMLAVAGTLLQRLTRNPLASPEVLGI 434

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  92 ASGATFGSGLALFL--GLTTLWIPVFSITFSLITLITVLVITSvlSQGYPVRILILSGLMIGALFNSLLYFLILLKPRKL 169
Cdd:PRK10577 435 SSGAGLGVVLALFLvpGAGFGWLLAAALLGALAALALILLLAR--RGGFAPERLLLTGIALSALFTALIQLLLASGDPRA 512

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 170 NTIANYLFGGFGDAEYSNVSIIAITFIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVG 249
Cdd:PRK10577 513 AQLLTWLSGSTYGVTWAQALPLLIVAVLLLALALLLRRWLDLLPLGDDTARALGLPVTRARLALLLLAALLTAAATATVG 592

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 250 IIGFIGMVIPQLIRkwqwkqSLG-----RQLALNIVIGGQIMVMADFIGSHILSPVQIPASIIIALIGIPVLFYMLISQS 324
Cdd:PRK10577 593 PLSFVGLMAPHLAR------MLGgrrarPQLVLAALLGALLMVLADWLGRTLLFPYQIPAGLLAALIGAPYFLWLLRRSR 666


                 ..
gi 581788122 325 KR 326
Cdd:PRK10577 667 RR 668
TM_ABC_iron-siderophores_like cd06550
Transmembrane subunit (TM), of Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 58-320 2.56e-33

Transmembrane subunit (TM), of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters involved in the uptake of siderophores, heme, vitamin B12, or the divalent cations Mg2+ and Zn2+. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The TMs are bundles of alpha helices that transverse the cytoplasmic membrane multiple times. The two ABCs bind and hydrolyze ATP and drive the transport reaction. Each TM has a prominent cytoplasmic loop which contacts an ABC and represents a conserved motif. The two TMs form either a homodimer (e.g. in the case of the BtuC subunits of the Escherichia coli BtuCD vitamin B12 transporter), a heterodimer (e.g. the TroC and TroD subunits of the Treponema pallidum general transition metal transporter, TroBCD), or a pseudo-heterodimer (e.g. the FhuB protein of the E. coli ferrichrome transporter, FhuBC). FhuB contains two tandem TMs which associate to form the pseudo-heterodimer. Both FhuB TMs are found in this hierarchy.


Pssm-ID: 119348 [Multi-domain]  Cd Length: 261  Bit Score: 123.44  E-value: 2.56e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  58 LLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFGSGLALFLGLTTLWIPVFSITFSLITLITVLVITSVLSQG 137
Cdd:cd06550    1 LLAALLVGAALAVSGAILQSLTRNRLASPSILGISHGALLGVVLALLLGIGLSNYALGAFAFAGALAIALLVLLLASRGG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 138 YPVRILILSGLMIGALFNSLLYFLILLKPRKLNTIANYLFGGFGDAEYSNVSIIAITFIIALFGIFIILNQLKLLQLGEL 217
Cdd:cd06550   81 LSPSKLILIGIVLSAFFSAGVILISLLSDDSLQDLNIWLFGSILGVTWEDLLILLIILLLVLLLLLLLSRKLNLLTFDED 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 218 KSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRKwQWKQSLGRQLALNIVIGGQIMVMADFIGSHIL 297
Cdd:cd06550  161 LAKSLGINVNLLRLLLLLLVALLVVAAVALVGVILFVGLIAPHLARR-LFGRSHRYLLPLSALLGAILLLLGDLLSRTLL 239

                        250       260
                 ....*....|....*....|...
gi 581788122 298 sPVQIPASIIIALIGIPVLFYML 320
Cdd:cd06550  240 -PSELPVGPVTALLGAPYFLYLL 261
 
Name Accession Description Interval E-value
FepD COG0609
ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and ...
 38-323 2.09e-61

ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440374  Cd Length: 306  Bit Score: 197.99  E-value: 2.09e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  38 LGDINDVFNQSILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFG--SGLALFLGLTTLWIPVF 115
Cdd:COG0609   19 LGPDGDPTADLIVWDLRLPRVLLALLVGAALAVAGALMQGLTRNPLADPGILGVSSGAALGavLAIVLGGGLSALGLPLA 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 116 SITFSLITLITVLVITSVLSQGYPVRiLILSGLMIGALFNSLLYFLILL-KPRKLNTIANYLFGGFGDAEYSNVSIIAIT 194
Cdd:COG0609   99 AFLGALLAALLVYLLARRGGGLSPLR-LVLAGVAVSALFSALTSLLLLLaDPEQLRSIVFWLMGSLAGASWDDVLLLLPV 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 195 FIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRKWqWKQSLGRQ 274
Cdd:COG0609  178 LLIGLLLALLLARALNALALGDETARSLGVNVERLRLLLLLLAALLTGAAVAVAGPIGFVGLVVPHIARLL-VGPDHRRL 256

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 581788122 275 LALNIVIGGQIMVMADFIGSHILSPVQIPASIIIALIGIPVLFYMLISQ 323
Cdd:COG0609  257 LPASALLGALLLLLADTLARTILAPAELPVGIVTALIGAPFFLYLLRRR 305
FecCD pfam01032
FecCD transport family; This is a sub-family of bacterial binding protein-dependent transport ...
 38-321 4.37e-48

FecCD transport family; This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.


Pssm-ID: 426003  Cd Length: 311  Bit Score: 163.85  E-value: 4.37e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122   38 LGDINDVFNQSILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFGS--GLALFLGLTTLWIPVF 115
Cdd:pfam01032  26 LLGGDDSLAALIVLDLRLPRVLAALLVGAALAVSGALLQTVTRNPLADPSILGISSGAALGAvlAILLGGSLSLFALPLA 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  116 SITFSLITLITVLVITSVLSQGYPVRiLILSGLMIGALFNSLLYFLILLK-PRKLNTIANYLFGGFGDAEYSNVSIIAIT 194
Cdd:pfam01032 106 AFIGALLAALLVYFLSRGRGGASPLR-LILAGIAVSALLSALTSLLLLLLnPEALQSILFWLMGSLSGANWSDVLILLPL 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  195 FIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRKWQwKQSLGRQ 274
Cdd:pfam01032 185 LLIGLILLLLLARKLNLLSLGDDTAKSLGVNVNRVRLLLLLLASLLTAASVAVVGPIGFVGLIVPHIARLLV-GANHRRL 263

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 581788122  275 LALNIVIGGQIMVMADFIGSHILSPVQIPASIIIALIGIPVLFYMLI 321
Cdd:pfam01032 264 LPLSALLGALLLLLADILARTILSPYELPVGIVTALIGAPFFIYLLL 310
PRK10577 PRK10577
Fe(3+)-hydroxamate ABC transporter permease FhuB;
18-326 4.11e-36

Fe(3+)-hydroxamate ABC transporter permease FhuB;


Pssm-ID: 236720 [Multi-domain]  Cd Length: 668  Bit Score: 137.66  E-value: 4.11e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  18 VLLSWIVILIITTSIYLFwqLGDINDVFN------QSILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGL 91
Cdd:PRK10577 357 WLLALGLLLLLALVVALS--FGRDAHGWNwlsgqlLDALLPLRLPRLLAALLAGAMLAVAGTLLQRLTRNPLASPEVLGI 434

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  92 ASGATFGSGLALFL--GLTTLWIPVFSITFSLITLITVLVITSvlSQGYPVRILILSGLMIGALFNSLLYFLILLKPRKL 169
Cdd:PRK10577 435 SSGAGLGVVLALFLvpGAGFGWLLAAALLGALAALALILLLAR--RGGFAPERLLLTGIALSALFTALIQLLLASGDPRA 512

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 170 NTIANYLFGGFGDAEYSNVSIIAITFIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVG 249
Cdd:PRK10577 513 AQLLTWLSGSTYGVTWAQALPLLIVAVLLLALALLLRRWLDLLPLGDDTARALGLPVTRARLALLLLAALLTAAATATVG 592

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 250 IIGFIGMVIPQLIRkwqwkqSLG-----RQLALNIVIGGQIMVMADFIGSHILSPVQIPASIIIALIGIPVLFYMLISQS 324
Cdd:PRK10577 593 PLSFVGLMAPHLAR------MLGgrrarPQLVLAALLGALLMVLADWLGRTLLFPYQIPAGLLAALIGAPYFLWLLRRSR 666


                 ..
gi 581788122 325 KR 326
Cdd:PRK10577 667 RR 668
TM_ABC_iron-siderophores_like cd06550
Transmembrane subunit (TM), of Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 58-320 2.56e-33

Transmembrane subunit (TM), of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters involved in the uptake of siderophores, heme, vitamin B12, or the divalent cations Mg2+ and Zn2+. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The TMs are bundles of alpha helices that transverse the cytoplasmic membrane multiple times. The two ABCs bind and hydrolyze ATP and drive the transport reaction. Each TM has a prominent cytoplasmic loop which contacts an ABC and represents a conserved motif. The two TMs form either a homodimer (e.g. in the case of the BtuC subunits of the Escherichia coli BtuCD vitamin B12 transporter), a heterodimer (e.g. the TroC and TroD subunits of the Treponema pallidum general transition metal transporter, TroBCD), or a pseudo-heterodimer (e.g. the FhuB protein of the E. coli ferrichrome transporter, FhuBC). FhuB contains two tandem TMs which associate to form the pseudo-heterodimer. Both FhuB TMs are found in this hierarchy.


Pssm-ID: 119348 [Multi-domain]  Cd Length: 261  Bit Score: 123.44  E-value: 2.56e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  58 LLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFGSGLALFLGLTTLWIPVFSITFSLITLITVLVITSVLSQG 137
Cdd:cd06550    1 LLAALLVGAALAVSGAILQSLTRNRLASPSILGISHGALLGVVLALLLGIGLSNYALGAFAFAGALAIALLVLLLASRGG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 138 YPVRILILSGLMIGALFNSLLYFLILLKPRKLNTIANYLFGGFGDAEYSNVSIIAITFIIALFGIFIILNQLKLLQLGEL 217
Cdd:cd06550   81 LSPSKLILIGIVLSAFFSAGVILISLLSDDSLQDLNIWLFGSILGVTWEDLLILLIILLLVLLLLLLLSRKLNLLTFDED 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 218 KSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRKwQWKQSLGRQLALNIVIGGQIMVMADFIGSHIL 297
Cdd:cd06550  161 LAKSLGINVNLLRLLLLLLVALLVVAAVALVGVILFVGLIAPHLARR-LFGRSHRYLLPLSALLGAILLLLGDLLSRTLL 239

                        250       260
                 ....*....|....*....|...
gi 581788122 298 sPVQIPASIIIALIGIPVLFYML 320
Cdd:cd06550  240 -PSELPVGPVTALLGAPYFLYLL 261
FepG COG4779
ABC-type enterobactin transport system, permease component [Inorganic ion transport and ...
 49-326 7.97e-31

ABC-type enterobactin transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 443810  Cd Length: 344  Bit Score: 118.68  E-value: 7.97e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  49 ILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFGSGLA-LFLGLTTLWIPVFSITFSLITLITV 127
Cdd:COG4779   68 VVLELRLPRALAALLVGAALGLSGAIFQSLTRNPLASPDIIGITAGASAGAVAAiVVLGGSGLAVALGALAGGLATALLV 147

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 128 LVIT-SVLSQGYpvRiLILSGLMIGALFNSLLYFLILLKP-RKLNTIANYLFGGFGDAEYSNVSIIAITFIIALFGIFII 205
Cdd:COG4779  148 YLLAwRGGVSGY--R-LILVGIGVSAMLTAVNSYLLTRADlEDAQSAAVWLTGSLNGRTWEDVLPLAVALAVLLPLALAL 224

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 206 LNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRKwqwkqsLGRQLALNIV----I 281
Cdd:COG4779  225 ARRLRLLELGDDTAAALGVRVERTRLLLLLVAVALAAVATAAAGPIAFVALAAPQIARR------LTRSPGPPLLpsalV 298

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 581788122 282 GGQIMVMADFIGSHILSPVQIPASIIIALIGIPVLFYMLISQSKR 326
Cdd:COG4779  299 GALLLLAADLVAQHLLAPVQLPVGVVTGALGGPYLLWLLIRENRR 343
PRK10577 PRK10577
Fe(3+)-hydroxamate ABC transporter permease FhuB;
43-320 8.83e-29

Fe(3+)-hydroxamate ABC transporter permease FhuB;


Pssm-ID: 236720 [Multi-domain]  Cd Length: 668  Bit Score: 116.48  E-value: 8.83e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  43 DVFNQSILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGAtfgsglALFLGLTTLWIPVFSITFSLI 122
Cdd:PRK10577  51 DDLEQLLLHYSRLPRLAIALLVGAALGLAGALLQQVLRNPLASPTTLGVAAGA------QLALVLATLFAPALLALASQL 124

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 123 ------TLITVLVIT-SVLSQGYPVRiLILSGLMIGALFNSLLYFLILLKPRKLNTIANYLFGGFGDAEYSNVSIIAITF 195
Cdd:PRK10577 125 aafaggLLAAALVFAlAGGKRLSPLR-LVLAGMVVSLYLGALTTLLLLFNEQYLQGLFLWGAGSLAQNDWSGVQRLLPRL 203

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 196 IIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRKWQWKQsLGRQL 275
Cdd:PRK10577 204 LVGLLLLLLLARPLTLLGLGDDVARSLGLAVSLTRLAALALAVLLSAAVVSAVGPIGFIGLAAPNLARLLGARR-LRARL 282

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 581788122 276 ALNIVIGGQIMVMADFIGSHI--LSPVQIPASIIIALIGIPVLFYML 320
Cdd:PRK10577 283 PLSPLIGALLLLLTDQLVRLLagVGGELLPTGAVTALIGAPLLLWLL 329
fecD PRK09777
Fe(3+) dicitrate ABC transporter permease subunit FecD;
36-321 8.53e-27

Fe(3+) dicitrate ABC transporter permease subunit FecD;


Pssm-ID: 182071  Cd Length: 318  Bit Score: 107.44  E-value: 8.53e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  36 WQLGDINDVfnqsILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFGS--GLALFLGLTTLWIP 113
Cdd:PRK09777  37 WQAGDEHYY----VLMEYRLPRLLLALFVGAALAVSGVLVQGIVRNPLASPDILGVNHAASLASvgALLLFPSLPVMWLP 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 114 VFSITFSLITLITVLVITSvlsQGYPVRiLILSGLMIGALFNSLLYFLILLKPRKLNTIANYLFGGFGDAEYSNVSIIAI 193
Cdd:PRK09777 113 LLAFIGGMAGLILLKMLAG---THQPMK-LALTGVALSALWASLTDYLMLSRPQDINNALLWLTGSLWGRDWSFVKVALP 188

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 194 TFIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRKWQWkqslGR 273
Cdd:PRK09777 189 WLILLLPLSLSFCRDLDLLALGDARATTLGVSVPHTQFWALLLAVALTATGVAACGPISFIGLVVPHLMRSLVG----GR 264

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 581788122 274 Q---LALNIVIGGQIMVMADFIGSHILSPVQIPASIIIALIGIPVLFYMLI 321
Cdd:PRK09777 265 HrrlLPVSALTGALLLLLADLLARIIHPPLELPAGVLTAIIGAPWFFWLLV 315
fecC PRK11228
iron-dicitrate ABC transporter permease FecC;
47-315 1.02e-26

iron-dicitrate ABC transporter permease FecC;


Pssm-ID: 183042  Cd Length: 323  Bit Score: 107.47  E-value: 1.02e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  47 QSILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFgsGLALFLGLTTLWIPVFSITF-----SL 121
Cdd:PRK11228  44 EALVQNLRLPRSLVAVLIGASLALAGALLQTLTHNPLASPSLLGINSGAAL--AMALTSALSPTPFAGYSLAFiaacgGG 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 122 ITLITVLVITSVLSQGYPVRILILSGLMIGALFNSLLYFLILLKPRKLNTIANYLFGGFGDAEYSNVSIIAITFIIALFG 201
Cdd:PRK11228 122 LSWLLVMTAGGGWRHTHDRNRLILAGIALSALCMALTRITLLLAEDHAYGIFYWLAGGVSHARWQEVWQLLPFVVTAVPV 201

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 202 IFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRKWQwKQSLGRQLALNIVI 281
Cdd:PRK11228 202 VLLLANQLNLLNLSDSSAHTLGVNLTRLRLVVNMLVLLLVGACVSVAGPVAFIGLLVPHLARFWI-GYDQRNVLPMSMLL 280

                        250       260       270
                 ....*....|....*....|....*....|....
gi 581788122 282 GGQIMVMADFIGSHILSPVQIPASIIIALIGIPV 315
Cdd:PRK11228 281 GATLMLLADLLARALAFPGELPAGAVLALIGAPC 314
btuC PRK09535
cobalamin ABC transporter permease BtuC;
47-320 8.86e-25

cobalamin ABC transporter permease BtuC;


Pssm-ID: 236553  Cd Length: 366  Bit Score: 102.91  E-value: 8.86e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  47 QSILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFGSGLALFLGLT-TLWIPVFSITFSLITLI 125
Cdd:PRK09535  88 QTIVLQIRLPRILLAATVGFALAAAGTVMQGFFRNPMADPSIIGVSSGAAVGAVAAIVLPLAvPFGLQAAAFAGALVAAF 167

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 126 TVLVITSVLSQGyPVRILILSGLMIGALFNSLLYFLILLKPRKLNTIANYLFGGFGDAEYSNVSIIAITFIIALFGIFII 205
Cdd:PRK09535 168 GVYAIATENGRT-PVATLLLAGVAVQTFLGAVISYLLLHSGESLRRAVYWLMGHLHGSTWSDVEVALPVVVVGFVVLLAY 246

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 206 LNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRkwqwkQSLGRQ----LALNIVI 281
Cdd:PRK09535 247 ARDLNVLLLGEEDAHTLGIEVERTKRLLLALASVVTAAAVAVAGVIGFVGLIVPHVMR-----LLVGPDhrilLPTSALA 321

                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 581788122 282 GGQIMVMADFIGShiLSPVQIPASIIIALIGIPVLFYML 320
Cdd:PRK09535 322 GASFLVATDTVAR--SGPAEVPVGIVTAALGAPFFLYLL 358
PRK03784 PRK03784
vtamin B12-transporter permease; Provisional
 45-321 7.32e-19

vtamin B12-transporter permease; Provisional


Pssm-ID: 235159  Cd Length: 331  Bit Score: 85.78  E-value: 7.32e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  45 FNQSILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFGSGLALFL--GLTTLWIpvfsitFSLI 122
Cdd:PRK03784  49 RGELFVWQLRLPRTLAVLLVGAALAVSGAVMQALFENPLAEPGLLGVSNGAGVALVAAVLLgqGLLPPWA------LSLC 122

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 123 TLITVLVITSVLsqgypVRI----------LILSGLMIGALFNSL----LYFLILLKPRKLntiANYLFGGFG--DAEYS 186
Cdd:PRK03784 123 AIAGALLITLIL-----LRFarrhrlstsrLLLAGVALGIICSALmtwaVYFSTSLDLRQL---MYWMMGGFGgvDWRQS 194

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 187 NVSIIAITFIIALFGIFIILNQlklLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRKWQ 266
Cdd:PRK03784 195 WLMLALLPVLIWLCCQGRPLNM---LALGEISARQLGLPLWFWRNLLVLATGWLVGVSVALAGAIGFIGLVIPHILRLCG 271

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 581788122 267 WKQSlGRQLALNIVIGGQIMVMADFIGSHILSPVQIPASIIIALIGIPVLFYMLI 321
Cdd:PRK03784 272 LTDH-RVLLPGCALAGASLLLLADIVARLALASAELPIGVVTATLGAPVFIWLLL 325
PRK10441 PRK10441
Fe(3+)-siderophore ABC transporter permease;
49-319 2.66e-17

Fe(3+)-siderophore ABC transporter permease;


Pssm-ID: 182464  Cd Length: 335  Bit Score: 81.29  E-value: 2.66e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  49 ILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFGS--GLALFLGLTTLWIPVFSITFSLI-TLI 125
Cdd:PRK10441  55 IVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGLLGVNAGASFAIvlGAALFGYSSAQEQLAMAFAGALVaSLI 134

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 126 TVLVITSVLSQGYPVRiLILSGLMIGALFNSLLYFLILLKPRKLNTIANYLFGGFGDAEYSNVSIIAITFIIALFGIFII 205
Cdd:PRK10441 135 VAFTGSQGGGQLSPVR-LTLAGVALAAVLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLL 213

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 206 LNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRkWQWKQSLGRQLALNIVIGGQI 285
Cdd:PRK10441 214 SRALNSLSLGSDTATALGSRVARTQLIGLLAITVLCGSATAVVGPIAFIGLMMPHMAR-WLVGADHRWSLPVTLLATPAL 292

                        250       260       270
                 ....*....|....*....|....*....|....
gi 581788122 286 MVMADFIGsHILSPVQIPASIIIALIGIPVLFYM 319
Cdd:PRK10441 293 LLFADIIG-RLLVPGELRVSVVSAFIGAPVLIFL 325
PRK10440 PRK10440
iron-enterobactin ABC transporter permease;
54-326 5.36e-14

iron-enterobactin ABC transporter permease;


Pssm-ID: 182463  Cd Length: 330  Bit Score: 71.67  E-value: 5.36e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  54 RLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFGSGLALFLGLTTLwipvFSITFSLIT--LITVLVIT 131
Cdd:PRK10440  59 RLPRVLMALLIGAALGVSGAIFQSLMRNPLGSPDVMGFNTGAWSGVLVAMVLFGQDL----TAIALAAMAggIVTSLLVW 134

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 132 SVL-SQGYPVRILILSGLMIGALFNSLLYFLILLKPRKLN-TIANYLFGGFGDAEYSNVSIIAITFIIALFGIFIILNQL 209
Cdd:PRK10440 135 LLAwRNGIDTFRLIIIGIGVRAMLVAFNTWLLLKASLETAlTAGLWNAGSLNGLTWAKTSPSAPIIILMLIAAALLVRRM 214

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 210 KLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRKWQWKQSLGrqLALNIVIGGQIMVMA 289
Cdd:PRK10440 215 RLLEMGDDTACALGVSVERSRLLLMLVAVVLTAAATALAGPISFIALVAPHIARRLSGTARWG--LTQAALCGALLLLAA 292

                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 581788122 290 DFIGSHILSPVQIPASIIIALIGIPVLFYMLISQSKR 326
Cdd:PRK10440 293 DLCAQQLFMPYQLPVGVVTVSLGGIYLIVLLIQESRK 329
ZnuB COG1108
ABC-type Mn2+/Zn2+ transport system, permease component [Inorganic ion transport and ...
 90-282 6.21e-03

ABC-type Mn2+/Zn2+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440725  Cd Length: 260  Bit Score: 37.72  E-value: 6.21e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122  90 GLASGATFGSGLALFLGLTTLWIPVFSitfsliTLITVLVITsVLSQGYPVRILILSGLMIGALFnSLLYFLILLKPRKL 169
Cdd:COG1108   36 ALSHAALPGVALAFLLGLSPLLGALVA------GLLAALLIG-LLRRRSRLKEDTAIGIVFSGGF-ALGVLLISLVPGSA 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 581788122 170 NTIANYLFGGFGDAEYSNVSIIAITFIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVG 249
Cdd:COG1108  108 VDLMSYLFGSILAVSRSDLLLLAVLAAVVLLLLLLFYRELLLVSFDPELARASGLPVRLLHLLLLVLLALTVVAALQAVG 187

                        170       180       190
                 ....*....|....*....|....*....|....
gi 581788122 250 IIGFIGM-VIPQLIRKwQWKQSLGRQLALNIVIG 282
Cdd:COG1108  188 ALLVSALlIIPAATAR-LLTRSLRRMLLLAVLIG 220
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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