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Conserved domains on  [gi|582617441|gb|EVZ07651|]
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hypothetical protein U354_02624 [Staphylococcus aureus F77710]

Protein Classification

YeeE/YedE family protein( domain architecture ID 10514231)

YeeE/YedE family protein similar to Escherichia coli proteins YeeE and YedE, which are membrane proteins that constitute transport components for sulfur-containing compounds

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Sulf_transp pfam04143
Sulphur transport; This is an integral membrane protein. It is predicted to have a function in ...
20-332 8.81e-116

Sulphur transport; This is an integral membrane protein. It is predicted to have a function in the transport of sulphur-containing molecules. It contains several conserved glycines and an invariant cysteine that is probably an important functional residue.


:

Pssm-ID: 461192 [Multi-domain]  Cd Length: 310  Bit Score: 338.03  E-value: 8.81e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582617441   20 RTRFCLTGGFRDMYVQKNNKMFYALLIAITIQSIGLLILTATDILQIPAHSFPILGTIIGSFIFGIGIVLAGGCATGTWY 99
Cdd:pfam04143   1 RGRFCFTGAIRDIYLFKDGRGLRALLLAIAVASVGFFLLAAAGLIDLPPSAFPWVGTIVGGLLFGVGMVLAGGCASGTLY 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582617441  100 RAGEGLIGSWIALVLYAVTAAITKTGILKPVMDKINQPTNVNSDMSQTTGIPFWGLVVILTIITIFLVVRTLNNKKVRVA 179
Cdd:pfam04143  81 RAGEGNLRSLITLLGFGLGAAATLSGLLAPWLQALLTATVVPVNLYSTLGISPLLLVALLLLIAAWLVARELRKPKLAPA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582617441  180 VPklkQRYTGIRYYLFEKRYHPFIAAIVIGLIALLAWPMSASTGRNDGLGITTPSANLVHFLITGETKFIDWGVFLVLGI 259
Cdd:pfam04143 161 PP---PKKTGLAHALFRRPWPPYVAGLLIGLLAVLAWLLSGATGRNFGLGFTGPSANLLQYLVTGDAKFLNWGVLLVLGI 237
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 582617441  260 FIGSYIAARGSREFKWRLPDKITIRNSAIGGICMGFGASVAGGCSIGNGLVETATMTWQGWIALASMIVGVWT 332
Cdd:pfam04143 238 ILGAFLAALLSGEFRLRAPDARTLLRAIIGGLLMGFGARLAGGCNIGAGLSGIASLSLSGWLALAFMILGAWL 310
 
Name Accession Description Interval E-value
Sulf_transp pfam04143
Sulphur transport; This is an integral membrane protein. It is predicted to have a function in ...
20-332 8.81e-116

Sulphur transport; This is an integral membrane protein. It is predicted to have a function in the transport of sulphur-containing molecules. It contains several conserved glycines and an invariant cysteine that is probably an important functional residue.


Pssm-ID: 461192 [Multi-domain]  Cd Length: 310  Bit Score: 338.03  E-value: 8.81e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582617441   20 RTRFCLTGGFRDMYVQKNNKMFYALLIAITIQSIGLLILTATDILQIPAHSFPILGTIIGSFIFGIGIVLAGGCATGTWY 99
Cdd:pfam04143   1 RGRFCFTGAIRDIYLFKDGRGLRALLLAIAVASVGFFLLAAAGLIDLPPSAFPWVGTIVGGLLFGVGMVLAGGCASGTLY 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582617441  100 RAGEGLIGSWIALVLYAVTAAITKTGILKPVMDKINQPTNVNSDMSQTTGIPFWGLVVILTIITIFLVVRTLNNKKVRVA 179
Cdd:pfam04143  81 RAGEGNLRSLITLLGFGLGAAATLSGLLAPWLQALLTATVVPVNLYSTLGISPLLLVALLLLIAAWLVARELRKPKLAPA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582617441  180 VPklkQRYTGIRYYLFEKRYHPFIAAIVIGLIALLAWPMSASTGRNDGLGITTPSANLVHFLITGETKFIDWGVFLVLGI 259
Cdd:pfam04143 161 PP---PKKTGLAHALFRRPWPPYVAGLLIGLLAVLAWLLSGATGRNFGLGFTGPSANLLQYLVTGDAKFLNWGVLLVLGI 237
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 582617441  260 FIGSYIAARGSREFKWRLPDKITIRNSAIGGICMGFGASVAGGCSIGNGLVETATMTWQGWIALASMIVGVWT 332
Cdd:pfam04143 238 ILGAFLAALLSGEFRLRAPDARTLLRAIIGGLLMGFGARLAGGCNIGAGLSGIASLSLSGWLALAFMILGAWL 310
PRK11099 PRK11099
putative inner membrane protein; Provisional
1-111 3.51e-16

putative inner membrane protein; Provisional


Pssm-ID: 236845  Cd Length: 399  Bit Score: 79.19  E-value: 3.51e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582617441   1 MWMIFsglivGGLLGFVMQRTRFCLTGGFRDMYVQKNNKMFYALLIAITIQSIGLLILTAtdiLQIPAHSFPI-LGTIIG 79
Cdd:PRK11099 219 LAMLF-----GVGFGLLIERAQICFTSAFRDLWITGRTHMAKAIILGMAVSAIGIFSYIQ---LGVPPKIFWAgPNAVIG 290
                         90       100       110
                 ....*....|....*....|....*....|..
gi 582617441  80 SFIFGIGIVLAGGCATGTWYRAGEGLIGSWIA 111
Cdd:PRK11099 291 GLLFGFGIVLAGGCETGWMYRAVEGQVHFWIV 322
seleno_YedE TIGR04112
putative selenium metabolism protein, YedE family; For 79 of the first 80 reference genomes in ...
8-121 6.00e-08

putative selenium metabolism protein, YedE family; For 79 of the first 80 reference genomes in which a member of this protein family, YedE, is found, a selenium utilization system is found, spread over a broad taxonomic range (Firmicutes, spirochetes, delta-proteobacteria, Fusobacteria, Bacteriodes, etc. This family is less widespread than YedF, also involved in selenium metabolism.


Pssm-ID: 274988  Cd Length: 337  Bit Score: 53.74  E-value: 6.00e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582617441    8 LIVGGLLGFVMQRTRFCLTGGFRDMYVQKNNKMFY---ALLIAITIQSIGLLILTATDILQIPAHSFpILGTIIGSFIFG 84
Cdd:TIGR04112 189 LAAGLIVGALAQRSRLCMVGGFRDLILFKDTHLLSgfvAILVAALIGNLVLGQFKLGFAGQPIAHTD-GLWNFLGMALVG 267
                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 582617441   85 IGIVLAGGCATGTWYRAGEGLIGSWIALVLYAVTAAI 121
Cdd:TIGR04112 268 LASVLLGGCPLRQLILAGEGNTDSAVTVLGMLVGAAF 304
YedE COG2391
Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains [General ...
199-337 9.77e-03

Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains [General function prediction only];


Pssm-ID: 441956  Cd Length: 143  Bit Score: 35.98  E-value: 9.77e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582617441 199 YHPFIAAIVIGL-IALLAWPMSASTGRNDGLGITTPSANLVHFLitgetkFIDWGVFLVLGIFIGSYIAARgsreFKWRL 277
Cdd:COG2391    7 WMALLGGLLIGLgLALLLLGNGRIAGISGILSGMLDPAKVLGFL------DRAWRFVFGGGLVVGPLLYRL----VAPHL 76
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 582617441 278 PDkITIRNS----AIGGICMGFGASVAGGCSIGNGLVETATMTWQGWIALASMIVGVWTMSHFI 337
Cdd:COG2391   77 PA-ITITIDpprlVIGGLLVGIGTRLGGGCTSGHGVCGLGRLSPRSLVATLAFMAGGFLTVFLV 139
 
Name Accession Description Interval E-value
Sulf_transp pfam04143
Sulphur transport; This is an integral membrane protein. It is predicted to have a function in ...
20-332 8.81e-116

Sulphur transport; This is an integral membrane protein. It is predicted to have a function in the transport of sulphur-containing molecules. It contains several conserved glycines and an invariant cysteine that is probably an important functional residue.


Pssm-ID: 461192 [Multi-domain]  Cd Length: 310  Bit Score: 338.03  E-value: 8.81e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582617441   20 RTRFCLTGGFRDMYVQKNNKMFYALLIAITIQSIGLLILTATDILQIPAHSFPILGTIIGSFIFGIGIVLAGGCATGTWY 99
Cdd:pfam04143   1 RGRFCFTGAIRDIYLFKDGRGLRALLLAIAVASVGFFLLAAAGLIDLPPSAFPWVGTIVGGLLFGVGMVLAGGCASGTLY 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582617441  100 RAGEGLIGSWIALVLYAVTAAITKTGILKPVMDKINQPTNVNSDMSQTTGIPFWGLVVILTIITIFLVVRTLNNKKVRVA 179
Cdd:pfam04143  81 RAGEGNLRSLITLLGFGLGAAATLSGLLAPWLQALLTATVVPVNLYSTLGISPLLLVALLLLIAAWLVARELRKPKLAPA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582617441  180 VPklkQRYTGIRYYLFEKRYHPFIAAIVIGLIALLAWPMSASTGRNDGLGITTPSANLVHFLITGETKFIDWGVFLVLGI 259
Cdd:pfam04143 161 PP---PKKTGLAHALFRRPWPPYVAGLLIGLLAVLAWLLSGATGRNFGLGFTGPSANLLQYLVTGDAKFLNWGVLLVLGI 237
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 582617441  260 FIGSYIAARGSREFKWRLPDKITIRNSAIGGICMGFGASVAGGCSIGNGLVETATMTWQGWIALASMIVGVWT 332
Cdd:pfam04143 238 ILGAFLAALLSGEFRLRAPDARTLLRAIIGGLLMGFGARLAGGCNIGAGLSGIASLSLSGWLALAFMILGAWL 310
PRK11099 PRK11099
putative inner membrane protein; Provisional
1-111 3.51e-16

putative inner membrane protein; Provisional


Pssm-ID: 236845  Cd Length: 399  Bit Score: 79.19  E-value: 3.51e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582617441   1 MWMIFsglivGGLLGFVMQRTRFCLTGGFRDMYVQKNNKMFYALLIAITIQSIGLLILTAtdiLQIPAHSFPI-LGTIIG 79
Cdd:PRK11099 219 LAMLF-----GVGFGLLIERAQICFTSAFRDLWITGRTHMAKAIILGMAVSAIGIFSYIQ---LGVPPKIFWAgPNAVIG 290
                         90       100       110
                 ....*....|....*....|....*....|..
gi 582617441  80 SFIFGIGIVLAGGCATGTWYRAGEGLIGSWIA 111
Cdd:PRK11099 291 GLLFGFGIVLAGGCETGWMYRAVEGQVHFWIV 322
PRK11099 PRK11099
putative inner membrane protein; Provisional
254-346 1.83e-09

putative inner membrane protein; Provisional


Pssm-ID: 236845  Cd Length: 399  Bit Score: 58.78  E-value: 1.83e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582617441 254 FLVLGIFIGSYIAARGSREFKWRLP-DKITIRNSAIGGICMGFGASVAGGCSIGNGLVETATMTWQGWIALASMIVGVWT 332
Cdd:PRK11099  78 MMIIGMFLGCLIAALWANNVKLRMPaSRIRILQALIGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFALATAIGSYF 157
                         90
                 ....*....|....
gi 582617441 333 MSHFIFVRPMKKVH 346
Cdd:PRK11099 158 GAKFTLLPFFRIPV 171
seleno_YedE TIGR04112
putative selenium metabolism protein, YedE family; For 79 of the first 80 reference genomes in ...
8-121 6.00e-08

putative selenium metabolism protein, YedE family; For 79 of the first 80 reference genomes in which a member of this protein family, YedE, is found, a selenium utilization system is found, spread over a broad taxonomic range (Firmicutes, spirochetes, delta-proteobacteria, Fusobacteria, Bacteriodes, etc. This family is less widespread than YedF, also involved in selenium metabolism.


Pssm-ID: 274988  Cd Length: 337  Bit Score: 53.74  E-value: 6.00e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582617441    8 LIVGGLLGFVMQRTRFCLTGGFRDMYVQKNNKMFY---ALLIAITIQSIGLLILTATDILQIPAHSFpILGTIIGSFIFG 84
Cdd:TIGR04112 189 LAAGLIVGALAQRSRLCMVGGFRDLILFKDTHLLSgfvAILVAALIGNLVLGQFKLGFAGQPIAHTD-GLWNFLGMALVG 267
                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 582617441   85 IGIVLAGGCATGTWYRAGEGLIGSWIALVLYAVTAAI 121
Cdd:TIGR04112 268 LASVLLGGCPLRQLILAGEGNTDSAVTVLGMLVGAAF 304
YedE COG2391
Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains [General ...
199-337 9.77e-03

Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains [General function prediction only];


Pssm-ID: 441956  Cd Length: 143  Bit Score: 35.98  E-value: 9.77e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582617441 199 YHPFIAAIVIGL-IALLAWPMSASTGRNDGLGITTPSANLVHFLitgetkFIDWGVFLVLGIFIGSYIAARgsreFKWRL 277
Cdd:COG2391    7 WMALLGGLLIGLgLALLLLGNGRIAGISGILSGMLDPAKVLGFL------DRAWRFVFGGGLVVGPLLYRL----VAPHL 76
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 582617441 278 PDkITIRNS----AIGGICMGFGASVAGGCSIGNGLVETATMTWQGWIALASMIVGVWTMSHFI 337
Cdd:COG2391   77 PA-ITITIDpprlVIGGLLVGIGTRLGGGCTSGHGVCGLGRLSPRSLVATLAFMAGGFLTVFLV 139
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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