|
Name |
Accession |
Description |
Interval |
E-value |
| PhoD_2 |
pfam19050 |
PhoD related phosphatase; This entry contains a domain that is presumed to be a phosphatase ... |
699-1237 |
0e+00 |
|
PhoD related phosphatase; This entry contains a domain that is presumed to be a phosphatase enzyme based on its similarity to pfam09423.
Pssm-ID: 408820 Cd Length: 543 Bit Score: 1108.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 699 IRMGDA-PAKWTYAVTSVTGCTRYEFLVAAKQDRSWRFIAHSCNDFSPSIPQQERSKLGGPVYMWKDVMQKHIEVGGFHC 777
Cdd:pfam19050 1 LQMEEAgPAKWTYAITSHLGCTRYEFLVAGRYETNWRFIAHSGNDFALNVNANERARLGGVGFMWKDILQKHVECGGFHV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 778 QIGTGNQVYADRMWKEIPLLKDWLDIKGKDVRKDAPWTARHEEDVQHAYFHYYTSTFDQPHVREAWAQIPHICQLDSHDI 857
Cdd:pfam19050 81 QLGLGGQIYADRLWKEIPLLKQWLAISGKENRKNAPWTAKHEEDVSHAYFHYYTSHFDQPHLREAFAQIPHVLQLDDHDI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 858 FDGFGSYPEYMQFSNMFKNIGRIAIDWYLLFQHHTTLSILRAVPDDRDLFTVTGTGWHFVKYLGPGLAVVGPDTRSERNP 937
Cdd:pfam19050 161 FDGFGSYPEYMQFSNMFKNIGRIGIEMYLLFQHHTTLEILRNVSNDLDLFTITGTGWHFVKYLGPAVVVVGPDTRSERNP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 938 HQVMAGPTYQGLFPRIATLPSSVQHVLLMLSVPILFPRMDMAESVANTMQTGKKAVNGLFNMTGKVAGGVAGIVGAKGLV 1017
Cdd:pfam19050 241 HQVMAGPTYQGLFPKVATLPPSVQHCIWMISVPLIYPRLETVEHIANTVATGKKAVTGTYNMLGKVTSSVAGVVGAKEVV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 1018 GEGFSSVKKAVGKTGMLSNVVSIFGEVDLLDDLRDHWTHQSKDLERTYLIRTLQGIAHARGIRFTFLSGDVQCCGAGLVH 1097
Cdd:pfam19050 321 GSGFSSVKKAVGKSGLMGGVLSPFGEIDILDELRDQWTHESKDLERTYLIRTLQGIAHQKSIRMTFLSGDVNCCGAGLVH 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 1098 DPSKPGDHKTMYQIISSAIVNGPPAGMMMKLLNNNRQLFIPQNGMRSTNTPSDTKEDMIDLFATDINGTPRAEKKLMARR 1177
Cdd:pfam19050 401 DPSHPSDHKTMYQIISSAIVNAPPPSYVLKLLHNNKPLYVPQNGQRSTNQPSDTKEDMMEIFATDVNGRPREHKKLMGRR 480
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 582958057 1178 NYTIFAAYEANQQVEYMHQV---PEKYVPPLSLAVDFIVQGDGVYSTTSKYGPIVIPRCEYGY 1237
Cdd:pfam19050 481 NYVAFVAYDPEVVQGSFGQVapgPQRGLGKLSLAVDFMVQGDGAYGTPVKYGPVIIPSLEYGR 543
|
|
| MPP_PhoD |
cd07389 |
Bacillus subtilis PhoD and related proteins, metallophosphatase domain; PhoD (also known as ... |
734-1118 |
1.55e-36 |
|
Bacillus subtilis PhoD and related proteins, metallophosphatase domain; PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Pssm-ID: 277335 [Multi-domain] Cd Length: 242 Bit Score: 138.68 E-value: 1.55e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 734 RFIAHSCNDFSPsipqqersklggPVYMWKDVMQkhIEVGGFHCQIGTGNQVYADRMWKEIPLlkdwldikgkdvrkdaP 813
Cdd:cd07389 1 RFAFGSCNGYSP------------GQFLAYRVIA--LSKRKPDVFLWLGDQIYEDGPKGLGPL----------------P 50
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 814 WTARHEEDVQHAYFHYYTSTFDQPHVREAWAQIPHICQLDSHDIFDGFGSYPEymqfSNMFKNIGRIAIDWYLLFQHHTT 893
Cdd:cd07389 51 PHPGHEALTLEEYRERYRQYKSDPDLQKLLASVPIVGIWDDHDIGDNDGDYPE----SPKFYARKAAARQAYLEFLPHPN 126
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 894 LSILRavpddrdlftVTGTGWHFVKYLGPGLAVVGPDTRSERnphqvmagptyqglfpriatlpssvqhvLLMLSVPILF 973
Cdd:cd07389 127 PSPRR----------IKRGGIYRSFIFGDLVKLILLDTRTYR----------------------------VIASGIQILP 168
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 974 PRmdmaesvantmqtgkkavnglfnmtgkvaggvagivgakglvgegfssvkkavgktgmlsnvvsiFGEVDLLDDLRDH 1053
Cdd:cd07389 169 ND-----------------------------------------------------------------LLEGESDDDLLDS 183
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 582958057 1054 WTHQSKDLERTYLIrtlqgIAHARGIRFTFLSGDVQCCGAGlVHDPSKPGDHKTMYQIISSAIVN 1118
Cdd:cd07389 184 WDGFPHERERLLDL-----IRLEKPKNVVFLSGDVHLGEIG-RLPSSPPGDGYVLVEVTSSGLTN 242
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
36-471 |
6.59e-11 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 67.27 E-value: 6.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 36 AAQERNLRQEPPLPRMRRTQTQPMESQLPYPDRPAAEREQLESHMPLRGASASPPAalqagPPKGGLPAPPAF----RAS 111
Cdd:PHA03247 2562 AAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPL-----PPDTHAPDPPPPspspAAN 2636
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 112 RAPKLQPAPAGRVDKP--------VSPMNPGVPEALNPYPEYHQQYWPPQAALDrsfsTASNMTVTARrgSPAPPETPEm 183
Cdd:PHA03247 2637 EPDPHPPPTVPPPERPrddpapgrVSRPRRARRLGRAAQASSPPQRPRRRAARP----TVGSLTSLAD--PPPPPPTPE- 2709
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 184 epsevfsyssrgpsrpnPAPDRAAPALHYSTSQASTNSGAIPILLDPTSPSLSQASsarkgtsrasqvfgsqgsnydedd 263
Cdd:PHA03247 2710 -----------------PAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGP------------------------ 2748
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 264 dATPVRETPPNRPWTPTEP-SGAYDHGPLTS-YRGAERQDSQRQQQPQTQAHAQPQPQPQPQPQSQMQPQQQPQQRAPQH 341
Cdd:PHA03247 2749 -ATPGGPARPARPPTTAGPpAPAPPAAPAAGpPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGP 2827
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 342 PSPAPNGGNASRRDPLEGEFSKLNVGDDAPPAYD--SLAGPGQAPPNNAYPTEKPVGAVPGAAVaQQQPQGQASPAPIQH 419
Cdd:PHA03247 2828 LPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDvrRRPPSRSPAAKPAAPARPPVRRLARPAV-SRSTESFALPPDQPE 2906
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 582958057 420 QSRQP-------TTPQSQGAPQGMPIQHPGG-----VPQPQQVYQQQIPNGAVPQQAVGIMPPG 471
Cdd:PHA03247 2907 RPPQPqappppqPQPQPPPPPQPQPPPPPPPrpqppLAPTTDPAGAGEPSGAVPQPWLGALVPG 2970
|
|
| WW |
pfam00397 |
WW domain; The WW domain is a protein module with two highly conserved tryptophans that binds ... |
528-556 |
4.65e-05 |
|
WW domain; The WW domain is a protein module with two highly conserved tryptophans that binds proline-rich peptide motifs in vitro.
Pssm-ID: 459800 [Multi-domain] Cd Length: 30 Bit Score: 41.34 E-value: 4.65e-05
10 20
....*....|....*....|....*....
gi 582958057 528 DGWMSHLDqASGQYYYIHIPTQRTQWEFP 556
Cdd:pfam00397 3 PGWEERWD-PDGRVYYYNHETGETQWEKP 30
|
|
| AvrBs3 |
NF041308 |
type III secretion system effector avirulence protein AvrBs3; |
57-180 |
1.19e-03 |
|
type III secretion system effector avirulence protein AvrBs3;
Pssm-ID: 469205 [Multi-domain] Cd Length: 1179 Bit Score: 43.41 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 57 QPMESQLPYPDRPAAEREQLESHMPLRGASASPPaalqAGPPKGGLPAPPAFRASRAPKL-QPAPA----------GRVD 125
Cdd:NF041308 2 EPIRSRTPSPAREPQAGSQPDGVQPIAGRLVSTA----ASSPLDGLPARPAMSRTRQPATpAPSPAfsvgsfsdllRQFD 77
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 126 KpvSPMNPGVPEALNPYPEYHQQYWP-----PQAALDRSFSTASNMTVTARRGSPAPPET 180
Cdd:NF041308 78 P--SLFDPSLFDSSPAFGAHHADAAPgemdeVQSGLRAADDPQSHLSAAVTAPSPTPPRT 135
|
|
| WW |
cd00201 |
Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; ... |
528-558 |
2.67e-03 |
|
Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other peptide recognition proteins such as antibodies and receptors; WW domains have a single groove formed by a conserved Trp and Tyr which recognizes a pair of residues of the sequence X-Pro; variable loops and neighboring domains confer specificity in this domain; there are five distinct groups based on binding: 1) PPXY motifs 2) the PPLP motif; 3) PGM motifs; 4) PSP or PTP motifs; 5) PR motifs.
Pssm-ID: 238122 [Multi-domain] Cd Length: 31 Bit Score: 36.35 E-value: 2.67e-03
10 20 30
....*....|....*....|....*....|.
gi 582958057 528 DGWMSHLDqASGQYYYIHIPTQRTQWEFPAP 558
Cdd:cd00201 2 PGWEERWD-PDGRVYYYNHNTKETQWEDPRE 31
|
|
| WW |
smart00456 |
Domain with 2 conserved Trp (W) residues; Also known as the WWP or rsp5 domain. Binds ... |
528-558 |
4.57e-03 |
|
Domain with 2 conserved Trp (W) residues; Also known as the WWP or rsp5 domain. Binds proline-rich polypeptides.
Pssm-ID: 197736 [Multi-domain] Cd Length: 33 Bit Score: 36.04 E-value: 4.57e-03
10 20 30
....*....|....*....|....*....|.
gi 582958057 528 DGWMSHLDqASGQYYYIHIPTQRTQWEFPAP 558
Cdd:smart00456 4 PGWEERKD-PDGRPYYYNHETKETQWEKPRE 33
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
38-257 |
8.34e-03 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 40.14 E-value: 8.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 38 QERNLRQEPPLPRMRRTQTQPMESQLPYPDRPAAE-REQLESHMPlrGASASPPAALQAGPPKGGLPAPPAFRASRAPKL 116
Cdd:NF033839 286 EPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEvKPQLEKPKP--EVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKP 363
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 117 QPAPAGRVDKPVSPMNPGV------PEALNPYPEYHQQYWPPQAALDRSFSTASNmTVTARRGSPAP-----PETPEMEP 185
Cdd:NF033839 364 EVKPQPEKPKPEVKPQPETpkpevkPQPEKPKPEVKPQPEKPKPEVKPQPEKPKP-EVKPQPEKPKPevkpqPEKPKPEV 442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 186 S--------EVFSYSSR-------GPSRPNP--APDRAAPALHYSTSQASTNSGAIPILLDPTSPSLSQASSARKGTSRA 248
Cdd:NF033839 443 KpqpekpkpEVKPQPETpkpevkpQPEKPKPevKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTNEKATNKP 522
|
....*....
gi 582958057 249 SQVFGSQGS 257
Cdd:NF033839 523 KKSLPSTGS 531
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PhoD_2 |
pfam19050 |
PhoD related phosphatase; This entry contains a domain that is presumed to be a phosphatase ... |
699-1237 |
0e+00 |
|
PhoD related phosphatase; This entry contains a domain that is presumed to be a phosphatase enzyme based on its similarity to pfam09423.
Pssm-ID: 408820 Cd Length: 543 Bit Score: 1108.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 699 IRMGDA-PAKWTYAVTSVTGCTRYEFLVAAKQDRSWRFIAHSCNDFSPSIPQQERSKLGGPVYMWKDVMQKHIEVGGFHC 777
Cdd:pfam19050 1 LQMEEAgPAKWTYAITSHLGCTRYEFLVAGRYETNWRFIAHSGNDFALNVNANERARLGGVGFMWKDILQKHVECGGFHV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 778 QIGTGNQVYADRMWKEIPLLKDWLDIKGKDVRKDAPWTARHEEDVQHAYFHYYTSTFDQPHVREAWAQIPHICQLDSHDI 857
Cdd:pfam19050 81 QLGLGGQIYADRLWKEIPLLKQWLAISGKENRKNAPWTAKHEEDVSHAYFHYYTSHFDQPHLREAFAQIPHVLQLDDHDI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 858 FDGFGSYPEYMQFSNMFKNIGRIAIDWYLLFQHHTTLSILRAVPDDRDLFTVTGTGWHFVKYLGPGLAVVGPDTRSERNP 937
Cdd:pfam19050 161 FDGFGSYPEYMQFSNMFKNIGRIGIEMYLLFQHHTTLEILRNVSNDLDLFTITGTGWHFVKYLGPAVVVVGPDTRSERNP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 938 HQVMAGPTYQGLFPRIATLPSSVQHVLLMLSVPILFPRMDMAESVANTMQTGKKAVNGLFNMTGKVAGGVAGIVGAKGLV 1017
Cdd:pfam19050 241 HQVMAGPTYQGLFPKVATLPPSVQHCIWMISVPLIYPRLETVEHIANTVATGKKAVTGTYNMLGKVTSSVAGVVGAKEVV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 1018 GEGFSSVKKAVGKTGMLSNVVSIFGEVDLLDDLRDHWTHQSKDLERTYLIRTLQGIAHARGIRFTFLSGDVQCCGAGLVH 1097
Cdd:pfam19050 321 GSGFSSVKKAVGKSGLMGGVLSPFGEIDILDELRDQWTHESKDLERTYLIRTLQGIAHQKSIRMTFLSGDVNCCGAGLVH 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 1098 DPSKPGDHKTMYQIISSAIVNGPPAGMMMKLLNNNRQLFIPQNGMRSTNTPSDTKEDMIDLFATDINGTPRAEKKLMARR 1177
Cdd:pfam19050 401 DPSHPSDHKTMYQIISSAIVNAPPPSYVLKLLHNNKPLYVPQNGQRSTNQPSDTKEDMMEIFATDVNGRPREHKKLMGRR 480
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 582958057 1178 NYTIFAAYEANQQVEYMHQV---PEKYVPPLSLAVDFIVQGDGVYSTTSKYGPIVIPRCEYGY 1237
Cdd:pfam19050 481 NYVAFVAYDPEVVQGSFGQVapgPQRGLGKLSLAVDFMVQGDGAYGTPVKYGPVIIPSLEYGR 543
|
|
| MPP_PhoD |
cd07389 |
Bacillus subtilis PhoD and related proteins, metallophosphatase domain; PhoD (also known as ... |
734-1118 |
1.55e-36 |
|
Bacillus subtilis PhoD and related proteins, metallophosphatase domain; PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Pssm-ID: 277335 [Multi-domain] Cd Length: 242 Bit Score: 138.68 E-value: 1.55e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 734 RFIAHSCNDFSPsipqqersklggPVYMWKDVMQkhIEVGGFHCQIGTGNQVYADRMWKEIPLlkdwldikgkdvrkdaP 813
Cdd:cd07389 1 RFAFGSCNGYSP------------GQFLAYRVIA--LSKRKPDVFLWLGDQIYEDGPKGLGPL----------------P 50
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 814 WTARHEEDVQHAYFHYYTSTFDQPHVREAWAQIPHICQLDSHDIFDGFGSYPEymqfSNMFKNIGRIAIDWYLLFQHHTT 893
Cdd:cd07389 51 PHPGHEALTLEEYRERYRQYKSDPDLQKLLASVPIVGIWDDHDIGDNDGDYPE----SPKFYARKAAARQAYLEFLPHPN 126
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 894 LSILRavpddrdlftVTGTGWHFVKYLGPGLAVVGPDTRSERnphqvmagptyqglfpriatlpssvqhvLLMLSVPILF 973
Cdd:cd07389 127 PSPRR----------IKRGGIYRSFIFGDLVKLILLDTRTYR----------------------------VIASGIQILP 168
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 974 PRmdmaesvantmqtgkkavnglfnmtgkvaggvagivgakglvgegfssvkkavgktgmlsnvvsiFGEVDLLDDLRDH 1053
Cdd:cd07389 169 ND-----------------------------------------------------------------LLEGESDDDLLDS 183
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 582958057 1054 WTHQSKDLERTYLIrtlqgIAHARGIRFTFLSGDVQCCGAGlVHDPSKPGDHKTMYQIISSAIVN 1118
Cdd:cd07389 184 WDGFPHERERLLDL-----IRLEKPKNVVFLSGDVHLGEIG-RLPSSPPGDGYVLVEVTSSGLTN 242
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
36-471 |
6.59e-11 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 67.27 E-value: 6.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 36 AAQERNLRQEPPLPRMRRTQTQPMESQLPYPDRPAAEREQLESHMPLRGASASPPAalqagPPKGGLPAPPAF----RAS 111
Cdd:PHA03247 2562 AAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPL-----PPDTHAPDPPPPspspAAN 2636
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 112 RAPKLQPAPAGRVDKP--------VSPMNPGVPEALNPYPEYHQQYWPPQAALDrsfsTASNMTVTARrgSPAPPETPEm 183
Cdd:PHA03247 2637 EPDPHPPPTVPPPERPrddpapgrVSRPRRARRLGRAAQASSPPQRPRRRAARP----TVGSLTSLAD--PPPPPPTPE- 2709
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 184 epsevfsyssrgpsrpnPAPDRAAPALHYSTSQASTNSGAIPILLDPTSPSLSQASsarkgtsrasqvfgsqgsnydedd 263
Cdd:PHA03247 2710 -----------------PAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGP------------------------ 2748
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 264 dATPVRETPPNRPWTPTEP-SGAYDHGPLTS-YRGAERQDSQRQQQPQTQAHAQPQPQPQPQPQSQMQPQQQPQQRAPQH 341
Cdd:PHA03247 2749 -ATPGGPARPARPPTTAGPpAPAPPAAPAAGpPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGP 2827
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 342 PSPAPNGGNASRRDPLEGEFSKLNVGDDAPPAYD--SLAGPGQAPPNNAYPTEKPVGAVPGAAVaQQQPQGQASPAPIQH 419
Cdd:PHA03247 2828 LPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDvrRRPPSRSPAAKPAAPARPPVRRLARPAV-SRSTESFALPPDQPE 2906
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 582958057 420 QSRQP-------TTPQSQGAPQGMPIQHPGG-----VPQPQQVYQQQIPNGAVPQQAVGIMPPG 471
Cdd:PHA03247 2907 RPPQPqappppqPQPQPPPPPQPQPPPPPPPrpqppLAPTTDPAGAGEPSGAVPQPWLGALVPG 2970
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
46-477 |
6.27e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 57.64 E-value: 6.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 46 PPLPRMRRT----QTQPMESQLPYPDRPAAEREQLESHMPLRGASASPPAAlQAGPPKGGL---PAPPAFRASRAPKLQP 118
Cdd:PHA03247 2553 PPLPPAAPPaapdRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVD-DRGDPRGPAppsPLPPDTHAPDPPPPSP 2631
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 119 APAGrvdkpvSPMNPGVPEALNPYPEYHQQYWPPQAALDRSfstASNMTVTARRGSPAPPETPEMEPSEVFSYSSRG--- 195
Cdd:PHA03247 2632 SPAA------NEPDPHPPPTVPPPERPRDDPAPGRVSRPRR---ARRLGRAAQASSPPQRPRRRAARPTVGSLTSLAdpp 2702
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 196 --PSRPNPAPDRAAPALHYSTSQASTNSGAIPILLDPTSPSLSQASsarkgtsrasqvfgsqgsnydedddATPVRETPP 273
Cdd:PHA03247 2703 ppPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGP-------------------------ATPGGPARP 2757
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 274 NRPWTPTEPSGAydhgplTSYRGAERQDSQRQQQPQTQAHAQPQPQPQPQPQSQMQPQQQPQQRAPQHPSPAPNGGnasr 353
Cdd:PHA03247 2758 ARPPTTAGPPAP------APPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGP---- 2827
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 354 rdplegefsklnvgddAPPAYDSLAGPGQAPPNNAYPTEKPVGAV-PGAAVAQQQPQGQASPAPIQhQSRQPTTPQSQGA 432
Cdd:PHA03247 2828 ----------------LPPPTSAQPTAPPPPPGPPPPSLPLGGSVaPGGDVRRRPPSRSPAAKPAA-PARPPVRRLARPA 2890
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 582958057 433 PQGMPIQHPGGVPQPQQVYQQQIPNGAVPQQAVGIMPPGTPQQQQ 477
Cdd:PHA03247 2891 VSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPP 2935
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
83-473 |
1.64e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 56.10 E-value: 1.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 83 RGASASPPAALQAGPPKGGLPaPPAFRASRAPKlQPAPAGRVDKPV-SPMNP-------GVPE-----ALNPYPEYHQQy 149
Cdd:PHA03247 2482 RPAEARFPFAAGAAPDPGGGG-PPDPDAPPAPS-RLAPAILPDEPVgEPVHPrmltwirGLEElasddAGDPPPPLPPA- 2558
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 150 wPPQAALDRSFSTA------SNMTVTARRGSP-APPETPEMEPSEVFSYSSRGPSRPNPAPDRAAPalhystsqastnsg 222
Cdd:PHA03247 2559 -APPAAPDRSVPPPrpaprpSEPAVTSRARRPdAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHA-------------- 2623
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 223 aipilLDPTSPSLSQASSARKGTSRASQVFGSQgsnydEDDDATPVRETPPNRPWTPTEPSGAydHGPLTSYRGAERQDS 302
Cdd:PHA03247 2624 -----PDPPPPSPSPAANEPDPHPPPTVPPPER-----PRDDPAPGRVSRPRRARRLGRAAQA--SSPPQRPRRRAARPT 2691
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 303 QRQQQPQTQAHAQPQPQPQPQPQSQMQPQQQPQQRAPQHPSPAPNGGNASRRDPlegEFSKLNVGDDAPPAYDSLAGPGQ 382
Cdd:PHA03247 2692 VGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVP---AGPATPGGPARPARPPTTAGPPA 2768
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 383 APPNNAyPTEKPVGAVPGAAVAQQQPQGQASPAPiqHQSRQPTTPQSQGAPQGMPIQHPGGvpqpqqvyqqQIPNGAVPQ 462
Cdd:PHA03247 2769 PAPPAA-PAAGPPRRLTRPAVASLSESRESLPSP--WDPADPPAAVLAPAAALPPAASPAG----------PLPPPTSAQ 2835
|
410
....*....|.
gi 582958057 463 QAVGIMPPGTP 473
Cdd:PHA03247 2836 PTAPPPPPGPP 2846
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
41-418 |
2.32e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 52.25 E-value: 2.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 41 NLRQEPPLPRMRRTQTQPMESQLPYPDRPAAEReQLESHMPLRGASASPPAA--------------LQAGPPKgglPAPP 106
Cdd:PHA03247 2697 SLADPPPPPPTPEPAPHALVSATPLPPGPAAAR-QASPALPAAPAPPAVPAGpatpggparparppTTAGPPA---PAPP 2772
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 107 AFRASRAPKLQPAPAGrvdKPVSPMNPGVPEALNPYPeyHQQYWPPQAALDRSFSTASNMTVTARRGSPAPPETPEMEPS 186
Cdd:PHA03247 2773 AAPAAGPPRRLTRPAV---ASLSESRESLPSPWDPAD--PPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPP 2847
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 187 EVFS----------YSSRGPSRP---NPAPDRAAPALHYSTSQASTNSGAIPILLDPTSPSLSQASSARKGTSRASQVFG 253
Cdd:PHA03247 2848 PSLPlggsvapggdVRRRPPSRSpaaKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPP 2927
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 254 SQgsnydEDDDATPVRETPPNRPWTPTEPSGAYDHGPLTSYRGAERQDSQRQQQPQTQAHAQPQPQPQPQPQSQMQPQQQ 333
Cdd:PHA03247 2928 QP-----QPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 334 PQQRAPQH------PSPAPNGGNASRRDPLEGEFSKLNVGDDAPPAYDSLAGPGQAPPNNAYPTEKPVGAVPGAAVAQQQ 407
Cdd:PHA03247 3003 RVSSWASSlalheeTDPPPVSLKQTLWPPDDTEDSDADSLFDSDSERSDLEALDPLPPEPHDPFAHEPDPATPEAGARES 3082
|
410
....*....|.
gi 582958057 408 PQGQASPAPIQ 418
Cdd:PHA03247 3083 PSSQFGPPPLS 3093
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
36-427 |
5.04e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.09 E-value: 5.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 36 AAQERNLRQEPPLPRMRRTQTQPMESQLPYPDRPAAEREQLESHMPLRG-------ASASPPAALQAGPPKGGLPAPPAF 108
Cdd:PHA03247 2634 AANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRprrraarPTVGSLTSLADPPPPPPTPEPAPH 2713
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 109 RASRAPKLQPAP-AGRVDKPVSPMNPGVPEAlnpypeyhqqywPPQAALDRSFSTASNMTVTARRGSPAPPETPEMEP-- 185
Cdd:PHA03247 2714 ALVSATPLPPGPaAARQASPALPAAPAPPAV------------PAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPpr 2781
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 186 ----SEVFSYSSRGPSRPNPaPDRAAPALHYSTSQASTNSGAIPILLDPTSPSLSQASSAR-KGTSRASQVFGSQGSnyd 260
Cdd:PHA03247 2782 rltrPAVASLSESRESLPSP-WDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPpPGPPPPSLPLGGSVA--- 2857
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 261 eddDATPVRETPPNRPWTPTepsgaydhgPLTSYRGAERQDSQRQQQPQTQAHAQPQPQPQPQPQSQMQPQQQPQQRAPQ 340
Cdd:PHA03247 2858 ---PGGDVRRRPPSRSPAAK---------PAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPP 2925
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 341 HPSPAPNGGNASRRDPlegefsklnvgdDAPPAYDSLAGPGqapPNNAYPTEKPVGAVPG--AAVAQQQPQGQAS---PA 415
Cdd:PHA03247 2926 PPQPQPPPPPPPRPQP------------PLAPTTDPAGAGE---PSGAVPQPWLGALVPGrvAVPRFRVPQPAPSreaPA 2990
|
410
....*....|..
gi 582958057 416 PIQHQSRQPTTP 427
Cdd:PHA03247 2991 SSTPPLTGHSLS 3002
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
80-285 |
5.84e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 50.62 E-value: 5.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 80 MPLRGASASPPAALQAGPPKGGLPAPPAfRASRAP--KLQPAPAGRVDKPVSPMNPGVPEALNPYPEYHQQYWPPQAALD 157
Cdd:PRK07003 350 MTLLRMLAFEPAVTGGGAPGGGVPARVA-GAVPAPgaRAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPA 428
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 158 RSFSTASNMTVTARRGSPAPPETPEmepsevfsySSRGPSRPNPAPDRAAPALHYSTSQASTNSGAIPILLDPTSPSLSQ 237
Cdd:PRK07003 429 APAPPATADRGDDAADGDAPVPAKA---------NARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAP 499
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 582958057 238 ASSARKGTSRASQVFGSQgsnyDEDDDATPVRETPPNRPWTPTEPSGA 285
Cdd:PRK07003 500 SAATPAAVPDARAPAAAS----REDAPAAAAPPAPEARPPTPAAAAPA 543
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
19-285 |
6.12e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.09 E-value: 6.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 19 GRMGRQQRRDSVDGANLAAQERNLRQEPPLPRMRRTQTQPMESQLPYPDRPAA---------------EREQLESHMPL- 82
Cdd:PHA03247 2774 APAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGplppptsaqptapppPPGPPPPSLPLg 2853
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 83 -----------RGASASPPA--ALQAGPPKGGLPAPPAFRASRAPKLQPAPAGRVDKPVSPMNPgVPEALNPYPEYHQQY 149
Cdd:PHA03247 2854 gsvapggdvrrRPPSRSPAAkpAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPP-QPQPQPPPPPQPQPP 2932
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 150 WPPQAaldRSFSTASNMTVTARRGSPAP----PETPEMEPSEV----FSYSSRGPSRPNPAPDrAAPALHYSTSQASTNS 221
Cdd:PHA03247 2933 PPPPP---RPQPPLAPTTDPAGAGEPSGavpqPWLGALVPGRVavprFRVPQPAPSREAPASS-TPPLTGHSLSRVSSWA 3008
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 582958057 222 GAIPILLDPTSP--SLSQA---SSARKGTSRASQVFGSQGSNYDEDDDATPVRETPP--NRPWTPTEPSGA 285
Cdd:PHA03247 3009 SSLALHEETDPPpvSLKQTlwpPDDTEDSDADSLFDSDSERSDLEALDPLPPEPHDPfaHEPDPATPEAGA 3079
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
68-204 |
3.02e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.17 E-value: 3.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 68 RPAAEREQL---ESHMPLRGASASPPAALQAGPPKGGLPAPPAFRASRAPKlqPAPAGRVDKPVSPMNPGVPEALNPYPE 144
Cdd:PRK14951 365 KPAAAAEAAapaEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPA--APPAAAPPAPVAAPAAAAPAAAPAAAP 442
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 145 YHQQYWPPQAALDRSFSTASNMTVTARRGSPAPPETPEMEPSevfsyssrgPSRPNPAPD 204
Cdd:PRK14951 443 AAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPA---------AARLTPTEE 493
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
92-285 |
3.25e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 48.33 E-value: 3.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 92 ALQAGPPKGGlpAPPAfRASRAPKLQPAPAGRVDKPVSPmNPGVPEALNPYPEYHQQYWPPQAALDRSFSTASNMTVTAR 171
Cdd:PRK12323 362 AFRPGQSGGG--AGPA-TAAAAPVAQPAPAAAAPAAAAP-APAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAAR 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 172 RGS-----------PAPPETPEMEPSevfsySSRGPSRPNPAPDRAAPALHYSTSQASTNSGAIP----ILLDPTSPSLS 236
Cdd:PRK12323 438 QASargpggapapaPAPAAAPAAAAR-----PAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPpweeLPPEFASPAPA 512
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 582958057 237 QASSARKGTSRASqvfGSQGSNYDEDDDATPVRETPPN----RPWTPTEPSGA 285
Cdd:PRK12323 513 QPDAAPAGWVAES---IPDPATADPDDAFETLAPAPAAapapRAAAATEPVVA 562
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
44-299 |
3.53e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 48.24 E-value: 3.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 44 QEPPLPRMRRTQTQPMESQLPYPDRPAAEREQLESHMPLRGASASPPAALQAGPPKGGLPAPPAFRASRAPKLQPAPAGR 123
Cdd:PHA03307 69 TGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPP 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 124 VDKPVSPMNPGVPEALNPYPeyhqqywPPQAALdrsfstASNMTVTARRGSPAPPETPemepsevfsyssrGPSRPNPAP 203
Cdd:PHA03307 149 AASPPAAGASPAAVASDAAS-------SRQAAL------PLSSPEETARAPSSPPAEP-------------PPSTPPAAA 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 204 DRAAPALHYSTSQASTNSGAIPilldPTSPSLSQASSARKGTSRASQVFGSQGSNYDEDDDATPVREtpPNRPWTPTEPS 283
Cdd:PHA03307 203 SPRPPRRSSPISASASSPAPAP----GRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITL--PTRIWEASGWN 276
|
250
....*....|....*.
gi 582958057 284 GAYDHGPLTSYRGAER 299
Cdd:PHA03307 277 GPSSRPGPASSSSSPR 292
|
|
| WW |
pfam00397 |
WW domain; The WW domain is a protein module with two highly conserved tryptophans that binds ... |
528-556 |
4.65e-05 |
|
WW domain; The WW domain is a protein module with two highly conserved tryptophans that binds proline-rich peptide motifs in vitro.
Pssm-ID: 459800 [Multi-domain] Cd Length: 30 Bit Score: 41.34 E-value: 4.65e-05
10 20
....*....|....*....|....*....
gi 582958057 528 DGWMSHLDqASGQYYYIHIPTQRTQWEFP 556
Cdd:pfam00397 3 PGWEERWD-PDGRVYYYNHETGETQWEKP 30
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
87-290 |
4.84e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 47.67 E-value: 4.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 87 ASPPAALQAGPPKGGLPAPPAFRASRaPKLQPAPAGRVDkPVSPMNPGVPEALNPYPEYHQQYWPPQAALDRSFSTASNM 166
Cdd:PRK07764 589 GPAPGAAGGEGPPAPASSGPPEEAAR-PAAPAAPAAPAA-PAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGG 666
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 167 TVTARRGSPAPPETPEMEPSEVFSYSSRGPSRPNPAPDRAAPAlhystsqastnsgaipilldPTSPSLSQASSARKGTS 246
Cdd:PRK07764 667 DGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATP--------------------PAGQADDPAAQPPQAAQ 726
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 582958057 247 RASQVFGSqgsnydeDDDATPVRETPPNRPWTPTEPSGAYDHGP 290
Cdd:PRK07764 727 GASAPSPA-------ADDPVPLPPEPDDPPDPAGAPAQPPPPPA 763
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
70-444 |
9.63e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 46.90 E-value: 9.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 70 AAEREQLESHMPLRGASASPPAALQAGPPKGGLPAPPAFRASRAPKLQPAPAGRVDKPVSPMNPGVPEALNPYPEYHQQY 149
Cdd:PRK07764 375 LARLERLERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAP 454
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 150 WPPQA----ALDRSFSTASNMTVTARRGSPAPPETPEMEPSEVFSYSSRGPSRPNPAPDRAAPALhysTSQASTNSGAIP 225
Cdd:PRK07764 455 SPPPAaapsAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPEI---LAAVPKRSRKTW 531
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 226 ILLDPTSpslsQASSARKG-------TSRASQVFGSQGSNydeDDDATPVRETPpNRPWTP-----TEPSGAYDHGP--- 290
Cdd:PRK07764 532 AILLPEA----TVLGVRGDtlvlgfsTGGLARRFASPGNA---EVLVTALAEEL-GGDWQVeavvgPAPGAAGGEGPpap 603
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 291 ---LTSYRGAERQDSQRQQQPQTQAHAQPQPQPQPQPQSQMQPQQQPQQRAPQHPSPAPNGGNASRRDPLEGEFSKLNVG 367
Cdd:PRK07764 604 assGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPP 683
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 368 DDAPPAYDSLAGPGQAPPNNAYPTEKPVGAVPGAAVAQQQPQGQASPAPIQH--QSRQPTTPQSQGAP---QGMPIQHPG 442
Cdd:PRK07764 684 APAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAAddPVPLPPEPDDPPDPagaPAQPPPPPA 763
|
..
gi 582958057 443 GV 444
Cdd:PRK07764 764 PA 765
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
37-239 |
1.51e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 46.02 E-value: 1.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 37 AQERNLRQEPPLPRMRRTQTQPMESQLPYPdrPAAEREQLESHMPLRGASASPPAALQAGP--PKGGLPAPPAFRASRAP 114
Cdd:PRK12323 383 AQPAPAAAAPAAAAPAPAAPPAAPAAAPAA--AAAARAVAAAPARRSPAPEALAAARQASArgPGGAPAPAPAPAAAPAA 460
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 115 KLQPAPAGRVDKPVSPMNPGVPEALNPYPEYHQQYWPPQAALDRSFSTASnmtvtarrgspapPETPEMEPSEVFSYSSR 194
Cdd:PRK12323 461 AARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPA-------------PAQPDAAPAGWVAESIP 527
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 582958057 195 GPSRPNPAPDRAAPALHYSTSQASTNSGAIPILLDPTSPSLSQAS 239
Cdd:PRK12323 528 DPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASG 572
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
67-240 |
4.23e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.93 E-value: 4.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 67 DRPAAEREQLESHmPLRGASASPPAALQAGPPKGGLPAPPAFRASRAPKLQ---PAPAGRVD--------------KPVS 129
Cdd:PHA03247 234 DEPFVERRVVISH-PLRGDIAAPAPPPVVGEGADRAPETARGATGPPPPPEaaaPNGAAAPPdgvwgaalagaplaLPAP 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 130 PMNP---------------GVPEALNPYPEYHQQY-----------WPPQAALD-------------------RS----- 159
Cdd:PHA03247 313 PDPPppapagdaeeeddedGAMEVVSPLPRPRQHYplgfpkrrrptWTPPSSLEdlsagrhhpkraslptrkrRSarhaa 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 160 --FSTASNMTVTARRGSPAPPETPEMEPSEVFSYSSRGPSRPNPAPDRAAPAlhystSQASTNSGAIPI-LLDPTSPSLS 236
Cdd:PHA03247 393 tpFARGPGGDDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDD-----GPAPPPERQPPApATEPAPDDPD 467
|
....
gi 582958057 237 QASS 240
Cdd:PHA03247 468 DATR 471
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
46-209 |
4.25e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.48 E-value: 4.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 46 PPLPRMRRTQTQPMESQLPYPDRPAAEREQLESHMPLRGASASPPAALQAG---PPKGGLPAPPAFRASRAPKLQPAPAG 122
Cdd:PRK12323 410 PAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAaarPAAAGPRPVAAAAAAAPARAAPAAAP 489
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 123 RVDKPVSPMNPGVPEALNPYPEYHQQYWPPQAALDRSFSTASNMTVTARRGSPAPPETPEMEPSEVFSYSSRGPSRPNPA 202
Cdd:PRK12323 490 APADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRAS 569
|
....*..
gi 582958057 203 PDRAAPA 209
Cdd:PRK12323 570 ASGLPDM 576
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
17-283 |
6.83e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.16 E-value: 6.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 17 TPGRMGRQQRRDSVDGANLAAQERNLRQEPPLPRMRRTQTQPMESQLPYPDRPAAEREQLESHMPLRGASASPPAALQAG 96
Cdd:PHA03247 2719 TPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESL 2798
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 97 PPKGGLPAPPAFRASRAPKLQPA--PAGRVDKPVSPmnpgVPEALNPYPEYHQQYWPPQAAL-------DRSFSTASNMT 167
Cdd:PHA03247 2799 PSPWDPADPPAAVLAPAAALPPAasPAGPLPPPTSA----QPTAPPPPPGPPPPSLPLGGSVapggdvrRRPPSRSPAAK 2874
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 168 VTARRGSPAP--PETPEMEPSEVFSYSSRGPSRPNPAPDRAAPALHYSTSQASTNSGAIPILLDPTSPSLSQASSARKGT 245
Cdd:PHA03247 2875 PAAPARPPVRrlARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGE 2954
|
250 260 270
....*....|....*....|....*....|....*...
gi 582958057 246 SRASqVFGSQGSNYDEDDDATPVRETPPNRPWTPTEPS 283
Cdd:PHA03247 2955 PSGA-VPQPWLGALVPGRVAVPRFRVPQPAPSREAPAS 2991
|
|
| AvrBs3 |
NF041308 |
type III secretion system effector avirulence protein AvrBs3; |
57-180 |
1.19e-03 |
|
type III secretion system effector avirulence protein AvrBs3;
Pssm-ID: 469205 [Multi-domain] Cd Length: 1179 Bit Score: 43.41 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 57 QPMESQLPYPDRPAAEREQLESHMPLRGASASPPaalqAGPPKGGLPAPPAFRASRAPKL-QPAPA----------GRVD 125
Cdd:NF041308 2 EPIRSRTPSPAREPQAGSQPDGVQPIAGRLVSTA----ASSPLDGLPARPAMSRTRQPATpAPSPAfsvgsfsdllRQFD 77
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 126 KpvSPMNPGVPEALNPYPEYHQQYWP-----PQAALDRSFSTASNMTVTARRGSPAPPET 180
Cdd:NF041308 78 P--SLFDPSLFDSSPAFGAHHADAAPgemdeVQSGLRAADDPQSHLSAAVTAPSPTPPRT 135
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
58-282 |
1.34e-03 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 43.14 E-value: 1.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 58 PMESQLPyPDRPAAEREQLESHMPLRGaSASPPAALQAGPPKGGL----PAPP-AFRASRAPKLQPAPAGRvDKPVSPMN 132
Cdd:PTZ00449 514 PEASGLP-PKAPGDKEGEEGEHEDSKE-SDEPKEGGKPGETKEGEvgkkPGPAkEHKPSKIPTLSKKPEFP-KDPKHPKD 590
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 133 PGVPEAlnpypeyhqqywppqaalDRSFSTASNMTvtaRRGSPAPPETPEMEPSEVFSYSSRGPSRPnPAPDR-AAPALH 211
Cdd:PTZ00449 591 PEEPKK------------------PKRPRSAQRPT---RPKSPKLPELLDIPKSPKRPESPKSPKRP-PPPQRpSSPERP 648
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 212 YST----SQASTNSGAIPilLDPT-----SPSLSQASSARKGTSRASQVFGSQGSNYDEDDDATP------VRETPPNRP 276
Cdd:PTZ00449 649 EGPkiikSPKPPKSPKPP--FDPKfkekfYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPgtpfttPRPLPPKLP 726
|
....*.
gi 582958057 277 WTPTEP 282
Cdd:PTZ00449 727 RDEEFP 732
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
45-442 |
2.35e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 42.36 E-value: 2.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 45 EPPLPR--MRRTQTQPMESQLPYPDRPAaereQLESHMPLRGASASPpaALQAGPPKGGLPAPPAF-------------- 108
Cdd:PHA03378 446 HSQAPTvvLHRPPTQPLEGPTGPLSVQA----PLEPWQPLPHPQVTP--VILHQPPAQGVQAHGSMldllekddedmeqr 519
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 109 -RASRAPKLQPAP-AGRVDKPVSPMNPGVPEALNPYPEYHQQYWPPQAALDRSFSTASNMTVTARRGSPAPPETPEMEPS 186
Cdd:PHA03378 520 vMATLLPPSPPQPrAGRRAPCVYTEDLDIESDEPASTEPVHDQLLPAPGLGPLQIQPLTSPTTSQLASSAPSYAQTPWPV 599
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 187 EVFSYSSRGPSRPNPAPDRAAPalhystsqastNSGAIPILLDPTSPSLSQASSArkgtsrasQVFGSQGSNYDEDDDAT 266
Cdd:PHA03378 600 PHPSQTPEPPTTQSHIPETSAP-----------RQWPMPLRPIPMRPLRMQPITF--------NVLVFPTPHQPPQVEIT 660
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 267 PVRETPPNRPWTPTEPSGAydhGPLTSYRgaerqdsqrqQQPQTQAHAQPQPQPQPQPQSQMQPQQQPQQRAPQHPSPAP 346
Cdd:PHA03378 661 PYKPTWTQIGHIPYQPSPT---GANTMLP----------IQWAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPP 727
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 347 NGGNASRRDPLEGEfsklnvGDDAPPAydslAGPGQAPPNNAYPTE-KPVGAVPGAAVAQQQPQGqaSPAPIQHQSRQPT 425
Cdd:PHA03378 728 AAAPGRARPPAAAP------GRARPPA----AAPGRARPPAAAPGRaRPPAAAPGAPTPQPPPQA--PPAPQQRPRGAPT 795
|
410 420
....*....|....*....|.
gi 582958057 426 -TPQSQGAP---QGMPIQHPG 442
Cdd:PHA03378 796 pQPPPQAGPtsmQLMPRAAPG 816
|
|
| WW |
cd00201 |
Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; ... |
528-558 |
2.67e-03 |
|
Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other peptide recognition proteins such as antibodies and receptors; WW domains have a single groove formed by a conserved Trp and Tyr which recognizes a pair of residues of the sequence X-Pro; variable loops and neighboring domains confer specificity in this domain; there are five distinct groups based on binding: 1) PPXY motifs 2) the PPLP motif; 3) PGM motifs; 4) PSP or PTP motifs; 5) PR motifs.
Pssm-ID: 238122 [Multi-domain] Cd Length: 31 Bit Score: 36.35 E-value: 2.67e-03
10 20 30
....*....|....*....|....*....|.
gi 582958057 528 DGWMSHLDqASGQYYYIHIPTQRTQWEFPAP 558
Cdd:cd00201 2 PGWEERWD-PDGRVYYYNHNTKETQWEDPRE 31
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
66-210 |
2.72e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 42.17 E-value: 2.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 66 PDRPAAEREQLESHMPLRGASASPPAALQAGPPKGGLPAPPafraSRAPKLQPAPAGRVDKPVSPMNPGVPEALNPYPEY 145
Cdd:PRK12323 441 ARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPA----RAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDA 516
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 582958057 146 HQQYWPPQAALDRSFSTASNMTVTARRG---SPAPPETPEMEPSEVFSYSSRGPSRPNPAPDRAAPAL 210
Cdd:PRK12323 517 APAGWVAESIPDPATADPDDAFETLAPApaaAPAPRAAAATEPVVAPRPPRASASGLPDMFDGDWPAL 584
|
|
| WW |
smart00456 |
Domain with 2 conserved Trp (W) residues; Also known as the WWP or rsp5 domain. Binds ... |
528-558 |
4.57e-03 |
|
Domain with 2 conserved Trp (W) residues; Also known as the WWP or rsp5 domain. Binds proline-rich polypeptides.
Pssm-ID: 197736 [Multi-domain] Cd Length: 33 Bit Score: 36.04 E-value: 4.57e-03
10 20 30
....*....|....*....|....*....|.
gi 582958057 528 DGWMSHLDqASGQYYYIHIPTQRTQWEFPAP 558
Cdd:smart00456 4 PGWEERKD-PDGRPYYYNHETKETQWEKPRE 33
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
32-217 |
5.81e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.12 E-value: 5.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 32 GANLAAQERNLRQEPPLPRMRRTQ-TQPMESQLPYPDRPAAEREQLESHMPLRGASASPPAALQAGPPKGGLPAP-PAFR 109
Cdd:PRK07764 594 AAGGEGPPAPASSGPPEEAARPAApAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGwPAKA 673
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 110 ASRAPKLQPAPAGRVDKPVSPMNPGVPEALNPYPEYHQQYWPPQAALDRSFSTASNMTVTARRGSPAPPETPEMEPSEVF 189
Cdd:PRK07764 674 GGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAG 753
|
170 180
....*....|....*....|....*...
gi 582958057 190 SYSSRGPSRPNPAPDRAAPALHYSTSQA 217
Cdd:PRK07764 754 APAQPPPPPAPAPAAAPAAAPPPSPPSE 781
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
61-184 |
5.83e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 40.95 E-value: 5.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 61 SQLPYPDRpAAEREQLESHMPLRGASASPPAALQAGPPKGglPAPPAFRASRAPKLQPAPAGRVDKPVSPMNPGV--PEA 138
Cdd:PRK14950 335 SQLDFQLR-TTSYGQLPLELAVIEALLVPVPAPQPAKPTA--AAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETatPPP 411
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 582958057 139 LNPYPEYHQQYWPPQAALDrsfSTASNMTVTARRGSPAPPETPEME 184
Cdd:PRK14950 412 VPPRPVAPPVPHTPESAPK---LTRAAIPVDEKPKYTPPAPPKEEE 454
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
12-473 |
8.08e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 40.35 E-value: 8.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 12 DTENITPGRMGRQQRRDSVDGANLAAQernlrqePPLPRMRRTQTQPMESQLPYPDRPAAEREQLESHMPLRGASASPPA 91
Cdd:PRK07764 369 DDERGLLARLERLERRLGVAGGAGAPA-------AAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAP 441
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 92 ALQAGPPkgGLPAPPAFRASRAPKLQPAPAgrvdkpvspmnPGVPEALNPYPEYHQQYWPPQAAldrsfstasnmtvtar 171
Cdd:PRK07764 442 PSPAGNA--PAGGAPSPPPAAAPSAQPAPA-----------PAAAPEPTAAPAPAPPAAPAPAA---------------- 492
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 172 rgSPAPPETPEMEPsevfsyssrgPSRPNPAPDRAAPALhysTSQASTNSGAIPILLDPTspslSQASSARKG------- 244
Cdd:PRK07764 493 --APAAPAAPAAPA----------GADDAATLRERWPEI---LAAVPKRSRKTWAILLPE----ATVLGVRGDtlvlgfs 553
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 245 TSRASQVFGSQGSNydeDDDATPVRETpPNRPWTP-----TEPSGAydhgpltsyRGAERQDSQRQQQPQTQAHAQPQPQ 319
Cdd:PRK07764 554 TGGLARRFASPGNA---EVLVTALAEE-LGGDWQVeavvgPAPGAA---------GGEGPPAPASSGPPEEAARPAAPAA 620
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 320 PQPQPQSQMQPQQQPQQRAPQHPSPAPNGGNASRRDPLEGEFSKLNVGDDAPPAYDSLAGPGQAPPNNAYPTEKPVGAVP 399
Cdd:PRK07764 621 PAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQ 700
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 582958057 400 GAAVAQQQPQGQASPAPIQHQSRQPTT---PQSQGAPQGMPIQHPGGVPQPQQVYQQQIPNGAV--PQQAVGIMPPGTP 473
Cdd:PRK07764 701 PAPAPAATPPAGQADDPAAQPPQAAQGasaPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPapAAAPAAAPPPSPP 779
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
38-257 |
8.34e-03 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 40.14 E-value: 8.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 38 QERNLRQEPPLPRMRRTQTQPMESQLPYPDRPAAE-REQLESHMPlrGASASPPAALQAGPPKGGLPAPPAFRASRAPKL 116
Cdd:NF033839 286 EPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEvKPQLEKPKP--EVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKP 363
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 117 QPAPAGRVDKPVSPMNPGV------PEALNPYPEYHQQYWPPQAALDRSFSTASNmTVTARRGSPAP-----PETPEMEP 185
Cdd:NF033839 364 EVKPQPEKPKPEVKPQPETpkpevkPQPEKPKPEVKPQPEKPKPEVKPQPEKPKP-EVKPQPEKPKPevkpqPEKPKPEV 442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 186 S--------EVFSYSSR-------GPSRPNP--APDRAAPALHYSTSQASTNSGAIPILLDPTSPSLSQASSARKGTSRA 248
Cdd:NF033839 443 KpqpekpkpEVKPQPETpkpevkpQPEKPKPevKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTNEKATNKP 522
|
....*....
gi 582958057 249 SQVFGSQGS 257
Cdd:NF033839 523 KKSLPSTGS 531
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
36-225 |
9.65e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 40.22 E-value: 9.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 36 AAQERNLRQEPPLPRMRRTQ-----TQPMESQLPYPdRPAAEREQLESHMPLRGASASPPAALQAGPPKGGLPAPPAFRA 110
Cdd:PRK07003 415 AAAAAATRAEAPPAAPAPPAtadrgDDAADGDAPVP-AKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPA 493
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 582958057 111 SRAPKLQPAPAGRVDKPVSPMNPGVPEALNPYPEYHQQYWPPQAALDRSFSTA------------SNMTVTARRG----- 173
Cdd:PRK07003 494 PRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAggaaaaldvlrnAGMRVSSDRGaraaa 573
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 582958057 174 ------SPAPPETPEMEPSEVFSYSSRGPSR-PNPAPDRAAPAlhystSQASTNSGAIP 225
Cdd:PRK07003 574 aakpaaAPAAAPKPAAPRVAVQVPTPRARAAtGDAPPNGAARA-----EQAAESRGAPP 627
|
|
| |
