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Conserved domains on  [gi|584786525|gb|EWJ12739|]
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amino acid permease [Staphylococcus aureus M87665]

Protein Classification

amino acid permease( domain architecture ID 11438095)

amino acid permease facilitates the transport of amino acids; similar to Mycobacterium tuberculosis L-asparagine permease

Gene Ontology:  GO:0055085|GO:0006865|GO:0016020|GO:0015171
PubMed:  10931886|24038584|25043943
TCDB:  2.A.3.1

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
2-455 0e+00

L-asparagine transporter or related permease [Amino acid transport and metabolism];


:

Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 589.40  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   2 ENNELQRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASDY 81
Cdd:COG1113    9 EEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYAREY 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  82 IHPAAGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPELPTWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTIIL 161
Cdd:COG1113   89 LGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIVA 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 162 MII-AGFGLIFFGFGNGGHAVGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIW 240
Cdd:COG1113  169 FIVvGLLLIFFGFGLPGGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINSVIW 248

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 241 RILIFYLGAIFVIVSVYPWNQLGDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKI 320
Cdd:COG1113  249 RILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDAPKF 328

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 321 FTKIMRNGVPLYTVVAVSLGILIGALLNVILPlyidgaKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHPEE-LEGHP 399
Cdd:COG1113  329 FGKLSKRGVPVRAILLSAVVLLIGVVLNYLLP------EKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREgAAALK 402

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 584786525 400 FKMPGGAVTNYLTILFLILVLVGMVFNVETRISVLIGVIFLTIVTIYYFIRYNKNN 455
Cdd:COG1113  403 FKMPGFPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRRRA 458
 
Name Accession Description Interval E-value
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
2-455 0e+00

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 589.40  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   2 ENNELQRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASDY 81
Cdd:COG1113    9 EEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYAREY 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  82 IHPAAGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPELPTWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTIIL 161
Cdd:COG1113   89 LGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIVA 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 162 MII-AGFGLIFFGFGNGGHAVGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIW 240
Cdd:COG1113  169 FIVvGLLLIFFGFGLPGGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINSVIW 248

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 241 RILIFYLGAIFVIVSVYPWNQLGDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKI 320
Cdd:COG1113  249 RILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDAPKF 328

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 321 FTKIMRNGVPLYTVVAVSLGILIGALLNVILPlyidgaKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHPEE-LEGHP 399
Cdd:COG1113  329 FGKLSKRGVPVRAILLSAVVLLIGVVLNYLLP------EKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREgAAALK 402

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 584786525 400 FKMPGGAVTNYLTILFLILVLVGMVFNVETRISVLIGVIFLTIVTIYYFIRYNKNN 455
Cdd:COG1113  403 FKMPGFPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRRRA 458
PRK10746 PRK10746
putative transport protein YifK; Provisional
 5-449 8.65e-174

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 495.49  E-value: 8.65e-174
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   5 ELQRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASDYIHP 84
Cdd:PRK10746   7 ELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSP 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  85 AAGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPELPTWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTIILMII 164
Cdd:PRK10746  87 FFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTIIVMIV 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 165 AGFGLIFFGFGNGGHAVGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIWRILI 244
Cdd:PRK10746 167 IGLGVIFFGFGNGGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLWRILI 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 245 FYLGAIFVIVSVYPWNQLGDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKIFTKI 324
Cdd:PRK10746 247 FYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAAMAKV 326

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 325 MRNGVPLYTVVAVSLGILIGALLNVILPlyidGAKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHPEELEGHPFKMPG 404
Cdd:PRK10746 327 SRHGVPVAGVAVSILILLVGSCLNYIIP----NPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKAAIASHPFRSIL 402

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*
gi 584786525 405 GAVTNYLTILFLILVLVGMVFNVETRISVLIGVIFLTIVTIYYFI 449
Cdd:PRK10746 403 FPWANYLTMAFLICVLIGMYFNEDTRMSLFVGIIFLLAVTLIYKV 447
GABAperm TIGR01773
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ...
 5-449 7.27e-97

gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273797  Cd Length: 452  Bit Score: 298.71  E-value: 7.27e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525    5 ELQRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASDYIHP 84
Cdd:TIGR01773   9 KLPNGLKTRHVTMLSIAGVIGAGLFVGSGSAIASAGPAALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYADDAIGR 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   85 AAGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPELPTWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTIILMII 164
Cdd:TIGR01773  89 WAGFTIGWLYWWFWVLVIPLEAIAAAGILQYWFPDIPLWLFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFII 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  165 aGFGLIFFGFGNGGHAVGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIWRILI 244
Cdd:TIGR01773 169 -LGAVAIFGFAPGSEVSGFSNLTGKGGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVIWRIIV 247

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  245 FYLGAIFVIVSVYPWNQLGDIGS-PFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKIFTK 323
Cdd:TIGR01773 248 FYLGSIFIVVALLPWNSPNLLEVgSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPRVFMK 327

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  324 IMRNGVPLYTVVAVSLGILIGALLNVILPlyidgaKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHPEELEGHPFKMP 403
Cdd:TIGR01773 328 LNKKGVPVQAVLASTFFSFLTVVVNYFAP------DKVFLFLVNSSGAIALLVYLVIAVSQLRMRKKLKANGEAIKIRMW 401

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*.
gi 584786525  404 GGAVTNYLTILFLILVLVGMVFNVETRISVLIGVIFLTIVTIYYFI 449
Cdd:TIGR01773 402 LYPWLTWLVIIFICGILVSMLFIPSMRDEVLLTGLLTIIVLCSYLV 447
AA_permease pfam00324
Amino acid permease;
15-425 7.55e-80

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 255.32  E-value: 7.55e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   15 IQMIALGGTIGVGLFMGATSTIKWTGP-SVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASDYIHPAAGYMTAWS 93
Cdd:pfam00324   2 VQMIALGGVIGTGLFVGSGSVLGQAGPaGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGWN 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   94 NIFQWIVVGMSEVIAVGEYMKFW--FPELP-TWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTIILMIIagFGLI 170
Cdd:pfam00324  82 YWLSWITVLALELTAASILIQFWelVPDIPyLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFII--VGII 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  171 FFGFGNGGHAVGISNLWTNGG---FMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIWRILIFYL 247
Cdd:pfam00324 160 LLSGGNPNDGAIFRYLGDNGGknnFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYI 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  248 GAIFVIVSVYPWNQLGDIG------SPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKIF 321
Cdd:pfam00324 240 LSLLAIGLLVPWNDPGLLNdsasaaSPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFL 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  322 TKIMRNGVPLYTVVAVSLGILIGALLNVILPLYidgaksIFVYVYSASILPGMIPWFMILFSHLRFRK---LHPEELEGH 398
Cdd:pfam00324 320 KKVDKRGVPLRAILVSMVISLLALLLASLNPAI------VFNFLLAISGLSGLIVWGLISLSHLRFRKafkYQGRSIDEL 393

                         410       420
                  ....*....|....*....|....*..
gi 584786525  399 PFKMPGGAVTNYLTILFLILVLVGMVF 425
Cdd:pfam00324 394 PFKAPLGPLGVILGLAAIIIILIIQFL 420
 
Name Accession Description Interval E-value
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
2-455 0e+00

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 589.40  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   2 ENNELQRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASDY 81
Cdd:COG1113    9 EEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYAREY 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  82 IHPAAGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPELPTWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTIIL 161
Cdd:COG1113   89 LGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIVA 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 162 MII-AGFGLIFFGFGNGGHAVGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIW 240
Cdd:COG1113  169 FIVvGLLLIFFGFGLPGGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINSVIW 248

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 241 RILIFYLGAIFVIVSVYPWNQLGDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKI 320
Cdd:COG1113  249 RILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDAPKF 328

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 321 FTKIMRNGVPLYTVVAVSLGILIGALLNVILPlyidgaKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHPEE-LEGHP 399
Cdd:COG1113  329 FGKLSKRGVPVRAILLSAVVLLIGVVLNYLLP------EKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREgAAALK 402

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 584786525 400 FKMPGGAVTNYLTILFLILVLVGMVFNVETRISVLIGVIFLTIVTIYYFIRYNKNN 455
Cdd:COG1113  403 FKMPGFPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRRRA 458
PRK10746 PRK10746
putative transport protein YifK; Provisional
 5-449 8.65e-174

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 495.49  E-value: 8.65e-174
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   5 ELQRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASDYIHP 84
Cdd:PRK10746   7 ELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSP 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  85 AAGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPELPTWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTIILMII 164
Cdd:PRK10746  87 FFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTIIVMIV 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 165 AGFGLIFFGFGNGGHAVGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIWRILI 244
Cdd:PRK10746 167 IGLGVIFFGFGNGGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLWRILI 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 245 FYLGAIFVIVSVYPWNQLGDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKIFTKI 324
Cdd:PRK10746 247 FYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAAMAKV 326

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 325 MRNGVPLYTVVAVSLGILIGALLNVILPlyidGAKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHPEELEGHPFKMPG 404
Cdd:PRK10746 327 SRHGVPVAGVAVSILILLVGSCLNYIIP----NPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKAAIASHPFRSIL 402

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*
gi 584786525 405 GAVTNYLTILFLILVLVGMVFNVETRISVLIGVIFLTIVTIYYFI 449
Cdd:PRK10746 403 FPWANYLTMAFLICVLIGMYFNEDTRMSLFVGIIFLLAVTLIYKV 447
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
2-459 1.31e-140

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 411.10  E-value: 1.31e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   2 ENNELQRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGP-SVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASD 80
Cdd:COG0833    6 KQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPgGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYATR 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  81 YIHPAAGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPELPTWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTII 160
Cdd:COG0833   86 FIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIKVITVI 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 161 LMIIAGFGLIFFGFGNggHAVGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIW 240
Cdd:COG0833  166 AFIIVGLLMIFGIIGG--HAPGFSNFTTGDGPFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAIRQVFW 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 241 RILIFYLGAIFVIVSVYPWNQLGDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKI 320
Cdd:COG0833  244 RILLFYILAIFVIAALIPYTDAGVAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLWSLAKEGMAPKI 323

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 321 FTKIMRNGVPLYTVVAVSLGILIGALLNVIlplyidGAKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHPEE---LEG 397
Cdd:COG0833  324 FAKLNKRGVPLNALLATMAVGLLALLSSFF------GAGTVYLWLLSISGLTGFIAWLGIAISHYRFRRAYVAQggdLED 397

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 584786525 398 HPFKMPGGAVTNYLTILFLILVLVGMVFNVETRISVLIGVIFLTIVTIYYFIRYNKNNVKAK 459
Cdd:COG0833  398 LKYKAPLFPFGPIFAFILCLIVIIGQAFDPEQRIALYIGIPFFLACYLGYKLKKKTKLVPLE 459
proY PRK10580
putative proline-specific permease; Provisional
 1-458 3.57e-128

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 379.16  E-value: 3.57e-128
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   1 MENNELQRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASD 80
Cdd:PRK10580   2 ESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQE 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  81 YIHPAAGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPELPTWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTII 160
Cdd:PRK10580  82 NLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATII 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 161 LMIIAGFGLIFFGFGNGGHAVGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIW 240
Cdd:PRK10580 162 IMIVAGIGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPM 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 241 RILIFYLGAIFVIVSVYPWNQLGDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKI 320
Cdd:PRK10580 242 RILVFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKI 321

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 321 FTKIMRNGVPLYTVVAVSLGILIGALLNVILPlyidgaKSIFVYVYSASILPGMIPWFMILFSHLRFR-KLHPEELEGHP 399
Cdd:PRK10580 322 FSKTSRRGIPWVTVLVMTTALLFAVYLNYIMP------ENVFLVIASLATFATVWVWIMILLSQIAFRrRLPPEEVKALK 395

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 400 FKMPGGAVTNYLTILFLILVLVGMVFNVETRISVLIGVIFLTIVTI-YYFIRYNKNNVKA 458
Cdd:PRK10580 396 FKVPGGVATTIGGLIFLVFIIGLIGYHPDTRISLYVGFAWIVLLLIgWMFKRRHDRQLAE 455
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
 2-459 2.52e-124

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 369.83  E-value: 2.52e-124
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   2 ENNELQRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASDY 81
Cdd:PRK11049  14 AEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDL 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  82 IHPAAGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPELPTWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTII- 160
Cdd:PRK11049  94 LGPWAGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVASLAVVLLLLSLNLATVKMFGEMEFWFAMIKIVAIVa 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 161 LMIIAGFGLIFFGFGNGGHAVGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIW 240
Cdd:PRK11049 174 LIVVGLVMVAMHFQSPTGVEASFAHLWNDGGMFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIPI 253

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 241 RILIFYLGAIFVIVSVYPWNQLGDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKI 320
Cdd:PRK11049 254 RIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKA 333

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 321 FTKIMRNGVPLYTVVAVSLGILIGALLNVILPLYIDgaksIFVYVYSASILPGMIPWFMILFSHLRFRKLHPEELEGHPF 400
Cdd:PRK11049 334 FAKLSKRAVPAKGLTFSCICLLGGVVLLYVNPSVIG----AFTLVTTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIY 409

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 401 KMPGGAVTNYLTILFLILVLVGMVFNVETRISVLIGVIFLTIVTI-YYFIRYNKNNVKAK 459
Cdd:PRK11049 410 KMPLGKLMCWVCMAFFAFVLVLLTLEDDTRQALIVTPLWFIALGLgYLFIGKKRAAELRK 469
PRK10238 PRK10238
aromatic amino acid transporter AroP;
4-450 8.58e-106

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 321.90  E-value: 8.58e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   4 NELQRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASDYIH 83
Cdd:PRK10238   8 EQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWG 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  84 PAAGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPELPTWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTIILMI 163
Cdd:PRK10238  88 SFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMI 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 164 IAGFGLIFFGFGNGGHAVgiSNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIWRIL 243
Cdd:PRK10238 168 IFGGWLLFSGNGGPQATV--SNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQVIYRIL 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 244 IFYLGAIFVIVSVYPWNQLGDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKIFTK 323
Cdd:PRK10238 246 IFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALAS 325

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 324 IMRNGVPLYTVVAVSLGILIGALLNVILPlyidgaKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHPEELEGHPFKMP 403
Cdd:PRK10238 326 VDKRGVPVNTILVSALVTALCVLINYLAP------ESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQGVVTRFPAL 399

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*..
gi 584786525 404 GGAVTNYLTILFLILVLVGMVFNVETRISVLIGVIFLTIVTIYYFIR 450
Cdd:PRK10238 400 LYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFK 446
PRK10249 PRK10249
phenylalanine transporter; Provisional
 6-451 2.84e-101

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 310.38  E-value: 2.84e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   6 LQRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASDYIHPA 85
Cdd:PRK10249  19 LHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPF 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  86 AGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPELPTWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTIILMiIA 165
Cdd:PRK10249  99 AGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGM-IG 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 166 GFGLIFFGFGNGGHAvGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIWRILIF 245
Cdd:PRK10249 178 FGLWLLFSGHGGEKA-SIDNLWRYGGFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLF 256

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 246 YLGAIFVIVSVYPWNQLGDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKIFTKIM 325
Cdd:PRK10249 257 YIGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRVS 336

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 326 RNGVPLYTVVAVSLGILIGALLNVILPlyidgaKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHPEELEGHPFKMPGG 405
Cdd:PRK10249 337 RRGVPINSLMLSGAITSLVVLINYLLP------QKAFGLLMALVVATLLLNWIMICLAHLRFRAAMRRQGRETQFKALLY 410

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*.
gi 584786525 406 AVTNYLTILFLILVLVGMVFNVETRISvligVIFLTIVTIYYFIRY 451
Cdd:PRK10249 411 PFGNYLCIAFLGMILLLMCTMDDMRLS----AILLPVWIVFLFVAF 452
GABAperm TIGR01773
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ...
 5-449 7.27e-97

gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273797  Cd Length: 452  Bit Score: 298.71  E-value: 7.27e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525    5 ELQRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASDYIHP 84
Cdd:TIGR01773   9 KLPNGLKTRHVTMLSIAGVIGAGLFVGSGSAIASAGPAALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYADDAIGR 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   85 AAGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPELPTWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTIILMII 164
Cdd:TIGR01773  89 WAGFTIGWLYWWFWVLVIPLEAIAAAGILQYWFPDIPLWLFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFII 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  165 aGFGLIFFGFGNGGHAVGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIWRILI 244
Cdd:TIGR01773 169 -LGAVAIFGFAPGSEVSGFSNLTGKGGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVIWRIIV 247

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  245 FYLGAIFVIVSVYPWNQLGDIGS-PFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKIFTK 323
Cdd:TIGR01773 248 FYLGSIFIVVALLPWNSPNLLEVgSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPRVFMK 327

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  324 IMRNGVPLYTVVAVSLGILIGALLNVILPlyidgaKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHPEELEGHPFKMP 403
Cdd:TIGR01773 328 LNKKGVPVQAVLASTFFSFLTVVVNYFAP------DKVFLFLVNSSGAIALLVYLVIAVSQLRMRKKLKANGEAIKIRMW 401

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*.
gi 584786525  404 GGAVTNYLTILFLILVLVGMVFNVETRISVLIGVIFLTIVTIYYFI 449
Cdd:TIGR01773 402 LYPWLTWLVIIFICGILVSMLFIPSMRDEVLLTGLLTIIVLCSYLV 447
PRK15049 PRK15049
L-asparagine permease;
7-426 4.23e-82

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 262.25  E-value: 4.23e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   7 QRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASDYIHPAA 86
Cdd:PRK15049  27 HKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKA 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  87 GYMTAWSNIFQWIVVGMSEVIAVGEYMKFW--FPELPTWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTIILMII 164
Cdd:PRK15049 107 AYVAGWMYFINWAMTGIVDITAVALYMHYWgaFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLV 186

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 165 AGFGLIFFGFGNGGHAVGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIWRILI 244
Cdd:PRK15049 187 VGTVFLGSGQPLDGNTTGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIGL 266

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 245 FYLGAIFVIVSVYPWNQLGDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKIFTKI 324
Cdd:PRK15049 267 FYVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAPSFMAKM 346

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 325 MRNGVPLYTVVAVSLGILIGALLNVILPlyidgaKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHPE-ELEGHPFKMP 403
Cdd:PRK15049 347 SRQHVPYAGILATLVVYVVGVFLNYLVP------SRVFEIVLNFASLGIIASWAFIIVCQMRLRKAIKEgKAADVSFKLP 420

                        410       420
                 ....*....|....*....|...
gi 584786525 404 GGAVTNYLTILFLILVLVGMVFN 426
Cdd:PRK15049 421 GAPFTSWLTLLFLLSVLVLMAFD 443
PRK11387 PRK11387
S-methylmethionine permease;
2-459 5.47e-82

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 260.94  E-value: 5.47e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   2 ENNELQRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPS-VILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASD 80
Cdd:PRK11387   8 QAGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAgTLLAYLIGALVVYLVMQCLGELSVAMPETGAFHVYAAR 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  81 YIHPAAGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPELPTWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTII 160
Cdd:PRK11387  88 YLGPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVPVWPWCLLFCALIFGLNVVSTRFFAEGEFWFSLIKVVTIL 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 161 LMII--AGFGLIFFGFGNGGHAVGISNLwTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGV 238
Cdd:PRK11387 168 AFIVlgGAAIFGFIPMQDGSPAPGLRNL-TAEGWFPHGGLPILMTMVAVNFAFSGTELIGIAAGETENPAKVIPVAIRTT 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 239 IWRILIFYLGAIFVIVSVYPWNQLGDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMP 318
Cdd:PRK11387 247 IARLVIFFVGTVLVLAALIPMQQAGVEKSPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYASGRMLWSLSNEGTLP 326

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 319 KIFTKIMRNGVPLYTVVAVSLGILIGALLNVILPlyidgaKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHPEE---L 395
Cdd:PRK11387 327 ACFARLTKRGIPLTALSVSMLGGLLALFSSVVAP------DTVFVALSAISGFAVVAVWLSICASHFMFRRRHLRDgkaL 400

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 584786525 396 EGHPFKMPGGAVTNYLTILFLILVLVGMVFNVETRISVLIGVIFLTIVTIYYFIRYNKNNVKAK 459
Cdd:PRK11387 401 SELAYRAPWYPLTPILGFVLCLLACVGLAFDPSQRIALWCGIPFVALCYGAYYLTQRLKRNMTQ 464
AA_permease pfam00324
Amino acid permease;
15-425 7.55e-80

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 255.32  E-value: 7.55e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   15 IQMIALGGTIGVGLFMGATSTIKWTGP-SVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASDYIHPAAGYMTAWS 93
Cdd:pfam00324   2 VQMIALGGVIGTGLFVGSGSVLGQAGPaGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGWN 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   94 NIFQWIVVGMSEVIAVGEYMKFW--FPELP-TWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTIILMIIagFGLI 170
Cdd:pfam00324  82 YWLSWITVLALELTAASILIQFWelVPDIPyLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFII--VGII 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  171 FFGFGNGGHAVGISNLWTNGG---FMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIWRILIFYL 247
Cdd:pfam00324 160 LLSGGNPNDGAIFRYLGDNGGknnFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYI 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  248 GAIFVIVSVYPWNQLGDIG------SPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKIF 321
Cdd:pfam00324 240 LSLLAIGLLVPWNDPGLLNdsasaaSPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFL 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  322 TKIMRNGVPLYTVVAVSLGILIGALLNVILPLYidgaksIFVYVYSASILPGMIPWFMILFSHLRFRK---LHPEELEGH 398
Cdd:pfam00324 320 KKVDKRGVPLRAILVSMVISLLALLLASLNPAI------VFNFLLAISGLSGLIVWGLISLSHLRFRKafkYQGRSIDEL 393

                         410       420
                  ....*....|....*....|....*..
gi 584786525  399 PFKMPGGAVTNYLTILFLILVLVGMVF 425
Cdd:pfam00324 394 PFKAPLGPLGVILGLAAIIIILIIQFL 420
PRK10836 PRK10836
lysine transporter; Provisional
 6-389 1.58e-79

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 255.13  E-value: 1.58e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   6 LQRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPS-VILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASDYIHP 84
Cdd:PRK10836  13 LRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGgALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEE 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  85 AAGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPELPTWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTIILMII 164
Cdd:PRK10836  93 GFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVFII 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 165 AGFGLIFFGFGNGGHAvGISNlWTNGGFMPNGIVGFFFALSIVIG-SYQGVELIGITAGETKDPQKNIVKAVNGVIWRIL 243
Cdd:PRK10836 173 VGVLMIIGIFKGAEPA-GWSN-WTIGDAPFAGGFAAMIGVAMIVGfSFQGTELIGIAAGESEDPAKNIPRAVRQVFWRIL 250

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 244 IFYLGAIFVIVSVYPW-------NQLGDIG-SPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKG 315
Cdd:PRK10836 251 LFYVFAILIISLIIPYtdpsllrNDVKDISvSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLACDG 330

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 584786525 316 EMPKIFTKIMRNGVPLYTVVAVSlgilIGALLNVILPLYidGAKSIFVYVYSASILPGMIPWFMILFSHLRFRK 389
Cdd:PRK10836 331 KAPRIFAKLSRGGVPRNALYATT----VIAGLCFLTSMF--GNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRR 398
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 7-425 5.25e-75

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 242.96  E-value: 5.25e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525    7 QRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGP-SVILAYLIAGIFLFLIMRAMGEMIYLNP-TTGSFATFASDYIHP 84
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPaGLLIGYAIMGSIIYCVMQSLGEMATFYPvVSGSFATYASRFVDP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   85 AAGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPELPTWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTIILMII 164
Cdd:TIGR00913  81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFII 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  165 aGFGLIFFGFGNGGHAVGiSNLWTNGGFMPNGIVGFFF---ALSIVIG--SYQGVELIGITAGETKDPQKNIVKAVNGVI 239
Cdd:TIGR00913 161 -LSIILNCGGGPNHGYIG-FRYWHDPGAFAGGTIGGRFkgvCSVFVTAafSFGGTELVALTAGEAANPRKSIPRAAKRTF 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  240 WRILIFYLGAIFVIVSVYPWN---------QLGDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYT 310
Cdd:TIGR00913 239 WRILVFYILTLFLIGFLVPYNdprllssssSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYA 318

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  311 LAHKGEMPKIFTKIMRNGVPLYTVVAVSLGILIgALLNVilplyIDGAKSIFVYVYSASILPGMIPWFMILFSHLRFR-- 388
Cdd:TIGR00913 319 LAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLL-AFLAV-----SKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRka 392

                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 584786525  389 -KLHPEELEGHPFKMPGGAVTNYLTILFLILVLVGMVF 425
Cdd:TIGR00913 393 mKAQGRSLDELPYKSQTGPYGSYYALFFNILILIAQGY 430
PRK10197 PRK10197
GABA permease;
17-434 2.61e-67

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 221.80  E-value: 2.61e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  17 MIALGGTIGVGLFMGATSTIKWTGPSVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASDYIHPAAGYMTAWSNIF 96
Cdd:PRK10197   1 MLSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWW 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  97 QWIVVGMSEVIAVGEYMKFWFPELPTWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTIiLMIIAGFGLIFFGFGN 176
Cdd:PRK10197  81 FWVLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAI-LAFIFLGAVAISGFYP 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 177 GGHAVGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIWRILIFYLGAIFVIVSV 256
Cdd:PRK10197 160 YAEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVAL 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 257 YPWNQLG--DIGSpFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKIFTKIMRNGVPlYTV 334
Cdd:PRK10197 240 IPWNMPGlkAVGS-YRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTP-YVA 317

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 335 VAVSLGiliGALLNVILPLYidGAKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHPEELEGHPFKMPGGAVTNYLTIL 414
Cdd:PRK10197 318 VLLSTG---AAFLTVVVNYY--APAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAEGSEIRLRMWLYPWLTWLVIG 392

                        410       420
                 ....*....|....*....|
gi 584786525 415 FLILVLVGMVFNVETRISVL 434
Cdd:PRK10197 393 FITFVLVVMLFRPAQQLEVI 412
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-459 1.53e-48

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 172.00  E-value: 1.53e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   1 MENNELQRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPSVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASD 80
Cdd:COG0531    4 GESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARR 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  81 YIHPAAGYMTAWSNIFQWIVVGMSEVIAVGEYMKFWFPELPTWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTII 160
Cdd:COG0531   84 ALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLL 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 161 LMIIAgfgliffgFGNGGHAVGISNLWTNGGfmpnGIVGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIW 240
Cdd:COG0531  164 LFIVV--------GLFAFDPANFTPFLPAGG----GLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLL 231

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 241 RILIFYLGAIFVIVSVYPWNQLGDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKI 320
Cdd:COG0531  232 IVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPKV 311

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 321 FTKI-MRNGVPLYTVVAVSLGILIGALLnvilplyidgAKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHPEelEGHP 399
Cdd:COG0531  312 FAKVhPRFGTPVNAILLTGVIALLLLLL----------GAASFTALASLASVGVLLAYLLVALAVIVLRRRRPD--LPRP 379

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 400 FKMPgGAVTNYLTILFLILVLVGMVFnvetrISVLIGVIFLTIVTIYYFIRYNKNNVKAK 459
Cdd:COG0531  380 FRVP-LPLIPILGILLCLFLLYLLGP-----GALLIGLVLLAIGLLLYLLYRRRHPKLLK 433
AA_permease_2 pfam13520
Amino acid permease;
18-445 4.03e-19

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 89.29  E-value: 4.03e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   18 IALGGTIGVGLFmgATSTIKWTGPSVILAYLIAGIFLFLIMR-AMGEMIYLNPTTGSFATFASDYIHPAAGYMTAWSNIF 96
Cdd:pfam13520   9 LVIGSVIGSGIF--VAPLVASGGPALIVWGWIAAIIFSLAVGlVYAELSSALPRSGGIYVYLENAFGKFVAFLAGWSNWF 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   97 QWIVVGMSEVIAVGEYMKFWFPE------LPTWIPGVIAILLLMAANLFSVKAFGEFEFWFALIKVVTIILMIIAGFGLI 170
Cdd:pfam13520  87 AYVLGLASSASVAASYLLSALGPdlvpttWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLLLPLILIIILGLVT 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  171 FFGFGngghavGISNLWTNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAGETKdpQKNIVKAVNGVIWRILIFYLGAI 250
Cdd:pfam13520 167 ADGGG------FNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVK--KRNVPKAIFIGVIIVGVLYILVN 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  251 FVIVSVYPWNQL---GDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMP--KIFTKIM 325
Cdd:pfam13520 239 IAFFGVVPDDEIalsSGLGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfsRFFAKVN 318

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  326 RNGVPLYtvvavslGILIGALLNVILPLYIDGAKSIFVYVYSASILPGMIPWFMILFSHLRFRKLHPeelegHPFKMPGG 405
Cdd:pfam13520 319 KFGSPIR-------AIILTAILSLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRP-----DLGRIPGR 386

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|
gi 584786525  406 AVTNYLTILFLILVLVgmVFNVETRISVLIGVIFLTIVTI 445
Cdd:pfam13520 387 WPVAIFGILFSLFLIV--ALFFPPVGPATGSSLNYAIILI 424
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 2-346 6.44e-16

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 79.86  E-value: 6.44e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525    2 ENNELQRGLSARQIQMIALGGTIGVGLFMGATSTIK-WTGPSVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASD 80
Cdd:TIGR00906  22 EESKMKRCLTTWDLMALGIGSTIGAGIYVLTGEVARnDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYV 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   81 YIHPAAGYMTAWSNIFQWIVVGMSEVIA------------VGEYMKFWFPELPTWIP------GVIAILLLMAANLFSVK 142
Cdd:TIGR00906 102 TVGELWAFITGWNLILEYVIGTAAVARSwsayfdellnkqIGQFRRTYFKLNYDGLAeypdffAVCLILLLAVLLSFGVK 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  143 AFGEFEFWFALIKVVTIILMIIAGFGLIFFGFGNGGHAVGisnlwtNGGFMPNGIVGFFFALSIVIGSYQGVELIGITAG 222
Cdd:TIGR00906 182 ESAWVNKIFTAINILVLLFVIIAGFTKADVANWSITEEKG------AGGFMPYGFTGVLSGAATCFFAFIGFDAIATTGE 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  223 ETKDPQKNIVKAVNGVIWRILIFYLGAIFVIVSVYPWNQLgDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIF 302
Cdd:TIGR00906 256 EVKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLL-DPDAPFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMF 334

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 584786525  303 SASRMIYTLAHKGEMPKIFTKI-MRNGVPL-YTVVAVSLGILIGAL 346
Cdd:TIGR00906 335 PLPRVIYAMARDGLLFKWLAQInSKTKTPInATVVSGAIAALMAFL 380
frlA PRK11357
amino acid permease;
1-458 1.86e-09

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 59.48  E-value: 1.86e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   1 MENNELQRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGPS--VILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFA 78
Cdd:PRK11357   1 MGSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPwlTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  79 SDYIHPAAGYMTAWSNIFQWIVVGMS-EVIAVGEYMKFWFPELPTWIPGVIA--ILLLMAANLFSVKAFGEFEFWFALIK 155
Cdd:PRK11357  81 KNAGSRPLAFLSGWASFWANDAPSLSiMALAIVSNLGFLTPIDPLLGKFIAAglIIAFMLLHLRSVEGGAAFQTLITIAK 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 156 VVTIILMIIAGFGLIFFGFGNGGHAVGISnlwTNGGFMpngivGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAV 235
Cdd:PRK11357 161 IIPFTIVIGLGIFWFKAENFAAPTTTAIG---ATGSFM-----ALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRAL 232

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 236 NGVIWRILIFYLGAIFVIVSVYPWNQLGDIGSPFVATFAKI-GITFAAGLI----NFVVLTAAMSGCnsgIFSASRMIYT 310
Cdd:PRK11357 233 IGSCLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWIpALGSTAGIFvaitAMIVILGSLSSC---VMYQPRLEYA 309

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 311 LAHKGEMPKIFTKIMrngvPLYTVVAVSLgILIGALLNVilplyidgaksiFVYVYSASILPGMIPWFMILFSHLRF--- 387
Cdd:PRK11357 310 MAKDNLFFKCFGHVH----PKYNTPDVSI-ILQGALGIF------------FIFVSDLTSLLGYFTLVMCFKNTLTFgsi 372

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 584786525 388 ----RKLHPEELeghpFKMPGGAVTNYLTILF-LILVLVGMVFnveTRISVLIGVIFLTIVTIYYFIRYNKNNVKA 458
Cdd:PRK11357 373 iwcrKRDDYKPL----WRTPAFGLMTTLAIASsLILVASTFVW---APIPGLICAVIVIATGLPAYAFWAKRSRQL 441
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 2-448 4.14e-07

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 52.06  E-value: 4.14e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525    2 ENNELQRGLSARQIQMIALGGTIGVGLFMGATSTIKWTGpSVILAYL---IAGIFLFLIMRAMGEMIYLNPTTGSFATFA 78
Cdd:TIGR00911  36 EAVALKKEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAG-SVGLALImwaVCGIFSIVGALVYAELGTTIPKSGGEYNYI 114

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   79 SDYIHPAAGYMTAWSNIFQwIVVGMSEVIAV--GEY-MKFWFP--ELPTW---IPGVIAILLLMAANLFSVKAFGEFEFW 150
Cdd:TIGR00911 115 LEVFGPLLAFLRLWIELLV-IRPGSQAVNALnfAIYiLTPVFPdcEVPEWairLVAVLCVLLLTLVNCLSVKWATRVQDI 193

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  151 FALIKVVTIILMIIagfGLIFFGFGNGGHAVGISNLWTNGGFMPNGIVgffFALSIVIGSYQGVELIGITAGETKDPQKN 230
Cdd:TIGR00911 194 FTACKLLALLLIII---TGWVQLGKGGVESLNPKNAFEGTETSAGGIV---LAFYSGIWAYGGWNYLNFVTEEVKNPYRT 267

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  231 IVKAVNGVIWRILIFYLGAIFVIVSVYPWNQLgdIGSPFVA-TFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIY 309
Cdd:TIGR00911 268 LPIAIIISMPIVTFIYVLTNIAYFTVLSPEEL--LASLAVAvDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFF 345

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  310 TLAHKGEMPKIFTKI-MRNGVPLYTVVAVSLGILIGALLNVILPL--YIDGAKSIFVYVYSASILpgmipwfmilfsHLR 386
Cdd:TIGR00911 346 VGGREGHLPSLLSMIhVKRLTPLPSLLIVCTLTLLMLFSGDIYSLinLISFANWLFNALAVAGLL------------WLR 413

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 584786525  387 FRKlhpEELEgHPFKMPggavtNYLTILFLILVLVGMVFN-VETRISVLIG-VIFLTIVTIYYF 448
Cdd:TIGR00911 414 YKR---PEMN-RPIKVP-----LFFPVFFLLSCLFLIILSlYSPPVGCGVGfIIMLTGVPVYFF 468
cadB PRK10435
cadaverine/lysine antiporter;
203-387 8.41e-05

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 44.74  E-value: 8.41e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 203 ALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIWRILIFYLGAIFVIVSVYPWNQLGDIGSPFVATFAKIGITFAA 282
Cdd:PRK10435 192 SILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIIYIAATQVISGMFPASVMAASGAPFAISASTILGNWAA 271

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 283 GLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKIFTKIMRNGVPLYTVVAVSLGILIGALLNVILPLYIDGAKSIF 362
Cdd:PRK10435 272 PLVSAFTAFACLTSLGSWMMLVGQAGVRAANDGNFPKVYGEVDKNGIPKKGLLLAAVKMTALMILITLMNSSGGKASDLF 351

                        170       180
                 ....*....|....*....|....*
gi 584786525 363 VYVYSASILPGMIPWFMILFSHLRF 387
Cdd:PRK10435 352 GELTGIAVLLTMLPYFYSCVDLIRF 376
PRK10644 PRK10644
arginine/agmatine antiporter;
17-377 3.79e-04

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 42.86  E-value: 3.79e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  17 MIAlGGTIGVGLFMGATSTIKwTGPSVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSFATFASDYIHPAAGYMTawsNIF 96
Cdd:PRK10644  18 MVA-GNIMGSGVFLLPANLAS-TGGIAIYGWLVTIIGALGLSMVYAKMSSLDPSPGGSYAYARRCFGPFLGYQT---NVL 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  97 QWIV-----VGMSeVIAVGeYMKFWFPELP----TWIPGVIAILLLMAANLFSVKAFGEFEFW---FALIKVVTIilmii 164
Cdd:PRK10644  93 YWLAcwignIAMV-VIGVG-YLSYFFPILKdplvLTITCVVVLWIFVLLNIVGPKMITRVQAVatvLALIPIVGI----- 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 165 AGFGLIFFGFGNGGHAVGISNLWTNGGFMPngivgfffALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIWRILI 244
Cdd:PRK10644 166 AVFGWFWFRGETYMAAWNVSGLGTFGAIQS--------TLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAV 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 245 FYLGAIFVIVSVYPWNQLGDIGSPFVATFAKIGITFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKIFTKI 324
Cdd:PRK10644 238 CYVLSSTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARV 317

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 584786525 325 MRNGVPlytvvavSLGILI-GALLNVILPLYID-GAKSIFVYVYSASILPGMIPW 377
Cdd:PRK10644 318 NKAGTP-------VAGLLIvGVLMTIFQLSSISpNASKEFGLVSSVSVIFTLVPY 365
PRK11021 PRK11021
putative transporter; Provisional
 201-373 1.86e-03

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 40.28  E-value: 1.86e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 201 FFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVngviwRILIFYLGAIFVIVSVYPWnQLGDIGSPFVATFAKIGI-- 278
Cdd:PRK11021 180 FAALGVMFWCFVGIEAFAHLASEFKNPERDFPRAL-----MIGLLLAGLVYWACTVVVL-HFPAYGDKQAAAASLPGIfv 253

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525 279 ----TFAAGLINFVVLTAAMSGCNSGIFSASRMIYTLAHKGEMPKIFTKIMRNGVPLYTVVAVS----LGILIGALLNVI 350
Cdd:PRK11021 254 qlfgGYALWVICVIGYLACFASVNIYTQSFARLVWSQAREGRPPSYLARLSARGVPVNALNAVLgccaVSILLIYALGLN 333

                        170       180
                 ....*....|....*....|...
gi 584786525 351 LPLYIDGAKSIFVYVYSASILPG 373
Cdd:PRK11021 334 LEALIAYANGIFVLIYLLCMLAA 356
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
 41-350 6.23e-03

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 38.96  E-value: 6.23e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525   41 PSVILAYLIAGIFLFLIMRAMGEMIYLNPTTGSF----ATFASDYIHPAAGYMTAWSNIFQWIVVGMSEVIAVGE----- 111
Cdd:TIGR00907  47 MSIVWGWIIAGAGSICIALSLAELSSAYPTSGGQyfwsAKLAPPRQMPFASWMTGWFNLAGQVAGTASTDLSVAQlilgi 126

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  112 ----YMKFWFPELPTWIPGVIAILLLMAA--NLFSVKAF---GEFEFWFALIKVVTIILMIIAGFGLIFFGFGNGGHAVG 182
Cdd:TIGR00907 127 vsltTPGREYIPTRWHIFGIMIGIHLIHAliNSLPTKWLpriTSSAAYWSLLGFLTICITLLACKSPKFNDGKFVFTNFN 206

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  183 ISN-LWTNGGFmpngivGFFFALSIVIGSYQGVELIGITAGETKDPQKNIVKAVNGVIwrILIFYLGAIFVIVSVYPWNQ 261
Cdd:TIGR00907 207 NSTgGWKPGGF------AFLLGLLNPAWSMTGYDGTAHMAEEIENPEVVGPRAIIGAV--AIGIVTGFCFNIVLFFSMGD 278

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584786525  262 LGDI-----GSP-----FVATFAKIGITFAAGLINFVVLTAAMSGCNSGifsaSRMIYTLAHKGEMP--KIFTKI-MRNG 328
Cdd:TIGR00907 279 IDSLissttGQPiaqifYNALGNKAGAIFLLCLILVTSFFCAITCMTAN----SRMIYAFSRDGGLPfsPLWSRVnPRTQ 354

                         330       340
                  ....*....|....*....|..
gi 584786525  329 VPLytvVAVSLGILIGALLNVI 350
Cdd:TIGR00907 355 VPL---NAVWLSAVWIILIGLL 373
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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