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Conserved domains on  [gi|593416183|gb|EXQ06178|]
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alpha/beta hydrolase fold family hydrolase [Staphylococcus aureus M17074]

Protein Classification

alpha/beta fold hydrolase( domain architecture ID 11426811)

alpha/beta hydrolase family protein catalyzes the hydrolysis of substrates with different chemical composition or physicochemical properties using a nucleophile-His-acid catalytic triad

PubMed:  1409539|12369917

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MenH COG0596
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, ...
4-260 1.62e-35

2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold is part of the Pathway/BioSystem: Menaquinone biosynthesis


:

Pssm-ID: 440361 [Multi-domain]  Cd Length: 221  Bit Score: 126.27  E-value: 1.62e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   4 FTRKDGTSIHYSTLG-EGYPIVLIHTVLDNYSVFNKLAAQLAKSFQVVLIDLRGHGYSDKP-RHIEIKDFSDDIVELLKY 81
Cdd:COG0596    6 FVTVDGVRLHYREAGpDGPPVVLLHGLPGSSYEWRPLIPALAAGYRVIAPDLRGHGRSDKPaGGYTLDDLADDLAALLDA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183  82 LYIEEVAFVCHEMGGIIGADISVRYPEFTSSLMLVNPTsiegelpeerlfrkYAHIIRNWdpekqdkflnKRKYYRPRKM 161
Cdd:COG0596   86 LGLERVVLVGHSMGGMVALELAARHPERVAGLVLVDEV--------------LAALAEPL----------RRPGLAPEAL 141
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183 162 NRFLKHVVDTneistkeeiqavkevfknaDISQTYRNVVVPTKIIAGEFGERTTRLEAKEVADLIQNADFEVYQESSAFP 241
Cdd:COG0596  142 AALLRALART-------------------DLRERLARITVPTLVIWGEKDPIVPPALARRLAELLPNAELVVLPGAGHFP 202
                        250
                 ....*....|....*....
gi 593416183 242 FVEEQERFVEDTASFINKH 260
Cdd:COG0596  203 PLEQPEAFAAALRDFLARL 221
 
Name Accession Description Interval E-value
MenH COG0596
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, ...
4-260 1.62e-35

2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold is part of the Pathway/BioSystem: Menaquinone biosynthesis


Pssm-ID: 440361 [Multi-domain]  Cd Length: 221  Bit Score: 126.27  E-value: 1.62e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   4 FTRKDGTSIHYSTLG-EGYPIVLIHTVLDNYSVFNKLAAQLAKSFQVVLIDLRGHGYSDKP-RHIEIKDFSDDIVELLKY 81
Cdd:COG0596    6 FVTVDGVRLHYREAGpDGPPVVLLHGLPGSSYEWRPLIPALAAGYRVIAPDLRGHGRSDKPaGGYTLDDLADDLAALLDA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183  82 LYIEEVAFVCHEMGGIIGADISVRYPEFTSSLMLVNPTsiegelpeerlfrkYAHIIRNWdpekqdkflnKRKYYRPRKM 161
Cdd:COG0596   86 LGLERVVLVGHSMGGMVALELAARHPERVAGLVLVDEV--------------LAALAEPL----------RRPGLAPEAL 141
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183 162 NRFLKHVVDTneistkeeiqavkevfknaDISQTYRNVVVPTKIIAGEFGERTTRLEAKEVADLIQNADFEVYQESSAFP 241
Cdd:COG0596  142 AALLRALART-------------------DLRERLARITVPTLVIWGEKDPIVPPALARRLAELLPNAELVVLPGAGHFP 202
                        250
                 ....*....|....*....
gi 593416183 242 FVEEQERFVEDTASFINKH 260
Cdd:COG0596  203 PLEQPEAFAAALRDFLARL 221
Abhydrolase_1 pfam00561
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.
21-245 5.79e-17

alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.


Pssm-ID: 395444 [Multi-domain]  Cd Length: 245  Bit Score: 77.93  E-value: 5.79e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   21 YPIVLIHTVLDNYSVFNKLAAQLAKS-FQVVLIDLRGHGYSDKPRHI---EIKDFSDDIVELLKYLYIEEVAFVCHEMGG 96
Cdd:pfam00561   1 PPVLLLHGLPGSSDLWRKLAPALARDgFRVIALDLRGFGKSSRPKAQddyRTDDLAEDLEYILEALGLEKVNLVGHSMGG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   97 IIGADISVRYPEFTSSLMLVNPTSIEGELPEERLFrkyahiIRNWDPEKQDKFLNK----------------------RK 154
Cdd:pfam00561  81 LIALAYAAKYPDRVKALVLLGALDPPHELDEADRF------ILALFPGFFDGFVADfapnplgrlvakllallllrlrLL 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183  155 YYRPRKMNRFLKHVVDtNEISTKEEIQAVKEVFKNADISQTYRNVVVPTKIIAGEfGERTTRLEAKEV-ADLIQNADFEV 233
Cdd:pfam00561 155 KALPLLNKRFPSGDYA-LAKSLVTGALLFIETWSTELRAKFLGRLDEPTLIIWGD-QDPLVPPQALEKlAQLFPNARLVV 232
                         250
                  ....*....|..
gi 593416183  234 YQESSAFPFVEE 245
Cdd:pfam00561 233 IPDAGHFAFLEG 244
PRK14875 PRK14875
acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
4-118 5.49e-12

acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional


Pssm-ID: 184875 [Multi-domain]  Cd Length: 371  Bit Score: 64.97  E-value: 5.49e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   4 FTRKDGTSIHYSTLGEGY--PIVLIHTV---LDNYsVFNKlaAQLAKSFQVVLIDLRGHGYSDKprHIE---IKDFSDDI 75
Cdd:PRK14875 113 KARIGGRTVRYLRLGEGDgtPVVLIHGFggdLNNW-LFNH--AALAAGRPVIALDLPGHGASSK--AVGagsLDELAAAV 187
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 593416183  76 VELLKYLYIEEVAFVCHEMGGIIGADISVRYPEFTSSLMLVNP 118
Cdd:PRK14875 188 LAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAP 230
bioH TIGR01738
pimelyl-[acyl-carrier protein] methyl ester esterase; This CoA-binding enzyme is required for ...
18-257 7.91e-09

pimelyl-[acyl-carrier protein] methyl ester esterase; This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam00561). Members of this family are restricted to the Proteobacteria. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]


Pssm-ID: 273783 [Multi-domain]  Cd Length: 245  Bit Score: 54.82  E-value: 7.91e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   18 GEGYP-IVLIHTVLDNYSVFNKLAAQLAKSFQVVLIDLRGHGYSDKPRHIEIKDFSDDIVELLKYLYIeevaFVCHEMGG 96
Cdd:TIGR01738   1 GQGNVhLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGFGPLSLADMAEAIAAQAPDPAI----WLGWSLGG 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   97 IIGADISVRYPEFTSSLMLVNPT---SIEGELPE---ERLFRKYAHIIRNWDPEKQDKFLNKRKYYRP--RKMNRFLKHV 168
Cdd:TIGR01738  77 LVALHIAATHPDRVRALVTVASSpcfSAREDWPEgikPDVLTGFQQQLSDDYQRTIERFLALQTLGTPtaRQDARALKQT 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183  169 VDTNEISTKEEIQAVKEVFKNADISQTYRNVVVPTKIIAGEFGERTTRLEAKEVADLIQNADFEVYQESSAFPFVEEQER 248
Cdd:TIGR01738 157 LLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPMLDKLAPHSELYIFAKAAHAPFLSHAEA 236

                  ....*....
gi 593416183  249 FVEDTASFI 257
Cdd:TIGR01738 237 FCALLVAFK 245
 
Name Accession Description Interval E-value
MenH COG0596
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, ...
4-260 1.62e-35

2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold is part of the Pathway/BioSystem: Menaquinone biosynthesis


Pssm-ID: 440361 [Multi-domain]  Cd Length: 221  Bit Score: 126.27  E-value: 1.62e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   4 FTRKDGTSIHYSTLG-EGYPIVLIHTVLDNYSVFNKLAAQLAKSFQVVLIDLRGHGYSDKP-RHIEIKDFSDDIVELLKY 81
Cdd:COG0596    6 FVTVDGVRLHYREAGpDGPPVVLLHGLPGSSYEWRPLIPALAAGYRVIAPDLRGHGRSDKPaGGYTLDDLADDLAALLDA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183  82 LYIEEVAFVCHEMGGIIGADISVRYPEFTSSLMLVNPTsiegelpeerlfrkYAHIIRNWdpekqdkflnKRKYYRPRKM 161
Cdd:COG0596   86 LGLERVVLVGHSMGGMVALELAARHPERVAGLVLVDEV--------------LAALAEPL----------RRPGLAPEAL 141
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183 162 NRFLKHVVDTneistkeeiqavkevfknaDISQTYRNVVVPTKIIAGEFGERTTRLEAKEVADLIQNADFEVYQESSAFP 241
Cdd:COG0596  142 AALLRALART-------------------DLRERLARITVPTLVIWGEKDPIVPPALARRLAELLPNAELVVLPGAGHFP 202
                        250
                 ....*....|....*....
gi 593416183 242 FVEEQERFVEDTASFINKH 260
Cdd:COG0596  203 PLEQPEAFAAALRDFLARL 221
Abhydrolase_1 pfam00561
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.
21-245 5.79e-17

alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.


Pssm-ID: 395444 [Multi-domain]  Cd Length: 245  Bit Score: 77.93  E-value: 5.79e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   21 YPIVLIHTVLDNYSVFNKLAAQLAKS-FQVVLIDLRGHGYSDKPRHI---EIKDFSDDIVELLKYLYIEEVAFVCHEMGG 96
Cdd:pfam00561   1 PPVLLLHGLPGSSDLWRKLAPALARDgFRVIALDLRGFGKSSRPKAQddyRTDDLAEDLEYILEALGLEKVNLVGHSMGG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   97 IIGADISVRYPEFTSSLMLVNPTSIEGELPEERLFrkyahiIRNWDPEKQDKFLNK----------------------RK 154
Cdd:pfam00561  81 LIALAYAAKYPDRVKALVLLGALDPPHELDEADRF------ILALFPGFFDGFVADfapnplgrlvakllallllrlrLL 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183  155 YYRPRKMNRFLKHVVDtNEISTKEEIQAVKEVFKNADISQTYRNVVVPTKIIAGEfGERTTRLEAKEV-ADLIQNADFEV 233
Cdd:pfam00561 155 KALPLLNKRFPSGDYA-LAKSLVTGALLFIETWSTELRAKFLGRLDEPTLIIWGD-QDPLVPPQALEKlAQLFPNARLVV 232
                         250
                  ....*....|..
gi 593416183  234 YQESSAFPFVEE 245
Cdd:pfam00561 233 IPDAGHFAFLEG 244
PRK14875 PRK14875
acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
4-118 5.49e-12

acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional


Pssm-ID: 184875 [Multi-domain]  Cd Length: 371  Bit Score: 64.97  E-value: 5.49e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   4 FTRKDGTSIHYSTLGEGY--PIVLIHTV---LDNYsVFNKlaAQLAKSFQVVLIDLRGHGYSDKprHIE---IKDFSDDI 75
Cdd:PRK14875 113 KARIGGRTVRYLRLGEGDgtPVVLIHGFggdLNNW-LFNH--AALAAGRPVIALDLPGHGASSK--AVGagsLDELAAAV 187
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 593416183  76 VELLKYLYIEEVAFVCHEMGGIIGADISVRYPEFTSSLMLVNP 118
Cdd:PRK14875 188 LAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAP 230
PLN02824 PLN02824
hydrolase, alpha/beta fold family protein
9-119 5.97e-12

hydrolase, alpha/beta fold family protein


Pssm-ID: 178419 [Multi-domain]  Cd Length: 294  Bit Score: 64.37  E-value: 5.97e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   9 GTSIHYSTLG-EGYPIVLIHTVLDNYSVFNKLAAQLAKSFQVVLIDLRGHGYSDKPRHIE---------------IKDFS 72
Cdd:PLN02824  17 GYNIRYQRAGtSGPALVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSappnsfytfetwgeqLNDFC 96
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 593416183  73 DDIVEllkylyiEEVAFVCHEMGGIIGADISVRYPEFTSSLMLVNPT 119
Cdd:PLN02824  97 SDVVG-------DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINIS 136
PldB COG2267
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];
4-125 1.59e-11

Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];


Pssm-ID: 441868 [Multi-domain]  Cd Length: 221  Bit Score: 62.33  E-value: 1.59e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   4 FTRKDGTSIHYSTL----GEGYPIVLIHTVLDNYSVFNKLAAQLAKS-FQVVLIDLRGHGYSDKPR-HIE-IKDFSDDIV 76
Cdd:COG2267    8 LPTRDGLRLRGRRWrpagSPRGTVVLVHGLGEHSGRYAELAEALAAAgYAVLAFDLRGHGRSDGPRgHVDsFDDYVDDLR 87
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 593416183  77 ELLKYL---YIEEVAFVCHEMGGIIGADISVRYPEFTSSLMLVNPTSIEGEL 125
Cdd:COG2267   88 AALDALrarPGLPVVLLGHSMGGLIALLYAARYPDRVAGLVLLAPAYRADPL 139
PRK10673 PRK10673
esterase;
22-117 2.30e-11

esterase;


Pssm-ID: 182637 [Multi-domain]  Cd Length: 255  Bit Score: 62.05  E-value: 2.30e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183  22 PIVLIHTV---LDNYSVfnkLAAQLAKSFQVVLIDLRGHGYSDKPRHIEIKDFSDDIVELLKYLYIEEVAFVCHEMGGII 98
Cdd:PRK10673  18 PIVLVHGLfgsLDNLGV---LARDLVNDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDALQIEKATFIGHSMGGKA 94
                         90
                 ....*....|....*....
gi 593416183  99 GADISVRYPEFTSSLMLVN 117
Cdd:PRK10673  95 VMALTALAPDRIDKLVAID 113
PLN02578 PLN02578
hydrolase
9-141 2.41e-11

hydrolase


Pssm-ID: 215315 [Multi-domain]  Cd Length: 354  Bit Score: 62.94  E-value: 2.41e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   9 GTSIHYSTLGEGYPIVLIHTVldNYSVFNKL--AAQLAKSFQVVLIDLRGHGYSDKPRhIEIKDF--SDDIVELLKYLYI 84
Cdd:PLN02578  75 GHKIHYVVQGEGLPIVLIHGF--GASAFHWRynIPELAKKYKVYALDLLGFGWSDKAL-IEYDAMvwRDQVADFVKEVVK 151
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 593416183  85 EEVAFVCHEMGGIIGADISVRYPEFTSSLMLVNPT---------SIEGELPEERLFRKYA-HIIRNW 141
Cdd:PLN02578 152 EPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAgqfgsesreKEEAIVVEETVLTRFVvKPLKEW 218
Hydrolase_4 pfam12146
Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is ...
23-209 7.31e-11

Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.


Pssm-ID: 463473 [Multi-domain]  Cd Length: 238  Bit Score: 60.69  E-value: 7.31e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   23 IVLIHTVLDNYSVFNKLAAQLAK-SFQVVLIDLRGHGYSDKPR-HIE-IKDFSDDIVELLKYLYIEE----VAFVCHEMG 95
Cdd:pfam12146   7 VVLVHGLGEHSGRYAHLADALAAqGFAVYAYDHRGHGRSDGKRgHVPsFDDYVDDLDTFVDKIREEHpglpLFLLGHSMG 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   96 GIIGADISVRYPEFTSSLMLVNPtSIEGELPEERLFRKYAHIIRNW------------------DPEKQDKFLNKrKYYR 157
Cdd:pfam12146  87 GLIAALYALRYPDKVDGLILSAP-ALKIKPYLAPPILKLLAKLLGKlfprlrvpnnllpdslsrDPEVVAAYAAD-PLVH 164
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 593416183  158 PRKMNRFLKHVVDtneistkeeiqAVKEVFKNADisqtyrNVVVPTKIIAGE 209
Cdd:pfam12146 165 GGISARTLYELLD-----------AGERLLRRAA------AITVPLLLLHGG 199
PRK05855 PRK05855
SDR family oxidoreductase;
3-64 3.85e-09

SDR family oxidoreductase;


Pssm-ID: 235628 [Multi-domain]  Cd Length: 582  Bit Score: 56.91  E-value: 3.85e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 593416183   3 LFTRKDGTSIHYSTLG--EGYPIVLIHTVLDNYSVFNKLAAQLAKSFQVVLIDLRGHGYSDKPR 64
Cdd:PRK05855   6 TVVSSDGVRLAVYEWGdpDRPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPK 69
bioH TIGR01738
pimelyl-[acyl-carrier protein] methyl ester esterase; This CoA-binding enzyme is required for ...
18-257 7.91e-09

pimelyl-[acyl-carrier protein] methyl ester esterase; This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam00561). Members of this family are restricted to the Proteobacteria. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]


Pssm-ID: 273783 [Multi-domain]  Cd Length: 245  Bit Score: 54.82  E-value: 7.91e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   18 GEGYP-IVLIHTVLDNYSVFNKLAAQLAKSFQVVLIDLRGHGYSDKPRHIEIKDFSDDIVELLKYLYIeevaFVCHEMGG 96
Cdd:TIGR01738   1 GQGNVhLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGFGPLSLADMAEAIAAQAPDPAI----WLGWSLGG 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   97 IIGADISVRYPEFTSSLMLVNPT---SIEGELPE---ERLFRKYAHIIRNWDPEKQDKFLNKRKYYRP--RKMNRFLKHV 168
Cdd:TIGR01738  77 LVALHIAATHPDRVRALVTVASSpcfSAREDWPEgikPDVLTGFQQQLSDDYQRTIERFLALQTLGTPtaRQDARALKQT 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183  169 VDTNEISTKEEIQAVKEVFKNADISQTYRNVVVPTKIIAGEFGERTTRLEAKEVADLIQNADFEVYQESSAFPFVEEQER 248
Cdd:TIGR01738 157 LLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPMLDKLAPHSELYIFAKAAHAPFLSHAEA 236

                  ....*....
gi 593416183  249 FVEDTASFI 257
Cdd:TIGR01738 237 FCALLVAFK 245
Abhydrolase_6 pfam12697
Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse ...
23-251 8.98e-09

Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse specificity.


Pssm-ID: 463673 [Multi-domain]  Cd Length: 211  Bit Score: 54.40  E-value: 8.98e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   23 IVLIHtvlDNYSVFNKLAAQLAKSFQVVLIDLRGHGYSDKPRHieikDFSD--DIVELLKYL-YIEEVAFVCHEMGGIIG 99
Cdd:pfam12697   1 VVLVH---GAGLSAAPLAALLAAGVAVLAPDLPGHGSSSPPPL----DLADlaDLAALLDELgAARPVVLVGHSLGGAVA 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183  100 ADISVRYPEFTsslMLVNPTSiegeLPEERLFRKYAHIIRNWDPEKQDKFLNKRKYYRprkmnRFLKHVVDTNEISTKEE 179
Cdd:pfam12697  74 LAAAAAALVVG---VLVAPLA----APPGLLAALLALLARLGAALAAPAWLAAESLAR-----GFLDDLPADAEWAAALA 141
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 593416183  180 IQAVKEVFKNADISQTYRNVVVPTKIIAGEfgERTTRLEAKEVADLIQNADFEVYQESSAFPFvEEQERFVE 251
Cdd:pfam12697 142 RLAALLAALALLPLAAWRDLPVPVLVLAEE--DRLVPELAQRLLAALAGARLVVLPGAGHLPL-DDPEEVAE 210
EstA COG1075
Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and ...
21-106 2.74e-07

Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and metabolism];


Pssm-ID: 440693 [Multi-domain]  Cd Length: 106  Bit Score: 47.90  E-value: 2.74e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183  21 YPIVLIHTVLDNYSVFNKLAAQLAKS-FQVVLIDlrghgYSDKPRHIEI--KDFSDDIVELLKYLYIEEVAFVCHEMGGI 97
Cdd:COG1075    6 YPVVLVHGLGGSAASWAPLAPRLRAAgYPVYALN-----YPSTNGSIEDsaEQLAAFVDAVLAATGAEKVDLVGHSMGGL 80

                 ....*....
gi 593416183  98 IgadisVRY 106
Cdd:COG1075   81 V-----ARY 84
YvaK COG1647
Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];
23-260 2.87e-06

Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 441253 [Multi-domain]  Cd Length: 246  Bit Score: 47.24  E-value: 2.87e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183  23 IVLIHTVLDNYSVFNKLAAQLAKS-FQVVLIDLRGHGYS-DKPRHIEIKDFSDDIVELLKYL--YIEEVAFVCHEMGGII 98
Cdd:COG1647   18 VLLLHGFTGSPAEMRPLAEALAKAgYTVYAPRLPGHGTSpEDLLKTTWEDWLEDVEEAYEILkaGYDKVIVIGLSMGGLL 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183  99 GADISVRYPEFtSSLMLVNPT-SIEGE-LPEERLFRKYAHIIRNWDPEKQDKFLNKRKYYR-P----RKMNRFLKHVvdt 171
Cdd:COG1647   98 ALLLAARYPDV-AGLVLLSPAlKIDDPsAPLLPLLKYLARSLRGIGSDIEDPEVAEYAYDRtPlralAELQRLIREV--- 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183 172 neistKEEIQAVKevfknadisqtyrnvvVPTKIIAGEfGERTTRLE-AKEVADLIQNADFE--VYQESS-AFPFVEEQE 247
Cdd:COG1647  174 -----RRDLPKIT----------------APTLIIQSR-KDEVVPPEsARYIYERLGSPDKElvWLEDSGhVITLDKDRE 231
                        250
                 ....*....|...
gi 593416183 248 RFVEDTASFINKH 260
Cdd:COG1647  232 EVAEEILDFLERL 244
PLN02894 PLN02894
hydrolase, alpha/beta fold family protein
22-132 5.76e-05

hydrolase, alpha/beta fold family protein


Pssm-ID: 215484 [Multi-domain]  Cd Length: 402  Bit Score: 43.75  E-value: 5.76e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183  22 PIVLIHTVLDNYSVFNKLAAQLAKSFQVVLIDLRGHGYSDKP----RHIEIKD--FSDDIVELLKYLYIEEVAFVCHEMG 95
Cdd:PLN02894 107 TLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPdftcKSTEETEawFIDSFEEWRKAKNLSNFILLGHSFG 186
                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 593416183  96 GIIGADISVRYPEFTSSLMLVNPT--SIEGELPEERLFR 132
Cdd:PLN02894 187 GYVAAKYALKHPEHVQHLILVGPAgfSSESDDKSEWLTK 225
PRK03592 PRK03592
haloalkane dehalogenase; Provisional
9-133 5.78e-05

haloalkane dehalogenase; Provisional


Pssm-ID: 235135  Cd Length: 295  Bit Score: 43.44  E-value: 5.78e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   9 GTSIHYSTLGEGYPIVLIH---TvlDNYSVFNKLAAqLAKSFQVVLIDLRGHGYSDKP----RHIEIKDFSDDIVELLKy 81
Cdd:PRK03592  16 GSRMAYIETGEGDPIVFLHgnpT--SSYLWRNIIPH-LAGLGRCLAPDLIGMGASDKPdidyTFADHARYLDAWFDALG- 91
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 593416183  82 lyIEEVAFVCHEMGGIIGADISVRYPEFTSSLM----LVNPTSIEgELPEE--RLFRK 133
Cdd:PRK03592  92 --LDDVVLVGHDWGSALGFDWAARHPDRVRGIAfmeaIVRPMTWD-DFPPAvrELFQA 146
PRK00870 PRK00870
haloalkane dehalogenase; Provisional
12-135 3.38e-04

haloalkane dehalogenase; Provisional


Pssm-ID: 179147 [Multi-domain]  Cd Length: 302  Bit Score: 41.11  E-value: 3.38e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183  12 IHYSTLG--EGYPIVLIH-----TVLdnysvFNKLAAQLAKS-FQVVLIDLRGHGYSDKPRHIEikDFS-----DDIVEL 78
Cdd:PRK00870  36 MHYVDEGpaDGPPVLLLHgepswSYL-----YRKMIPILAAAgHRVIAPDLIGFGRSDKPTRRE--DYTyarhvEWMRSW 108
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 593416183  79 LKYLYIEEVAFVCHEMGGIIGADISVRYPEFTSSLMLVN---PTSiEGELPEE-RLFRKYA 135
Cdd:PRK00870 109 FEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANtglPTG-DGPMPDAfWAWRAFS 168
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
4-109 1.44e-03

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 38.84  E-value: 1.44e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183   4 FTRKDGTSIHYsTL-----GEGYP-IVLIH---TVLDNYsvFNKLAAQLAKS-FQVVLIDLRGHGYSDkpRHIEIKDFsD 73
Cdd:COG1506    2 FKSADGTTLPG-WLylpadGKKYPvVVYVHggpGSRDDS--FLPLAQALASRgYAVLAPDYRGYGESA--GDWGGDEV-D 75
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 593416183  74 DIVELLKYL----YI--EEVAFVCHEMGGIIGADISVRYPEF 109
Cdd:COG1506   76 DVLAAIDYLaarpYVdpDRIGIYGHSYGGYMALLAAARHPDR 117
PRK03204 PRK03204
haloalkane dehalogenase; Provisional
12-117 1.60e-03

haloalkane dehalogenase; Provisional


Pssm-ID: 179554 [Multi-domain]  Cd Length: 286  Bit Score: 39.07  E-value: 1.60e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 593416183  12 IHYSTLGEGYPIVLIHTVLDNYSVFNKLAAQLAKSFQVVLIDLRGHGYSDKPRHI--EIKDFSDDIVELLKYLYIEEVAF 89
Cdd:PRK03204  26 IHYIDEGTGPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFgyQIDEHARVIGEFVDHLGLDRYLS 105
                         90       100
                 ....*....|....*....|....*...
gi 593416183  90 VCHEMGGIIGADISVRYPEFTSSLMLVN 117
Cdd:PRK03204 106 MGQDWGGPISMAVAVERADRVRGVVLGN 133
LETM1_RBD pfam07766
LETM1-like, RBD; Members of this entry are inner mitochondrial membrane proteins which play a ...
141-189 4.62e-03

LETM1-like, RBD; Members of this entry are inner mitochondrial membrane proteins which play a role in potassium and hydrogen ion exchange. Deletion of LETM1 is thought to be involved in the development of Wolf-Hirschhorn syndrome in humans. This entry represents the ribosome-binding domain (RBD) of LETM1/MDM38 proteins.


Pssm-ID: 462258 [Multi-domain]  Cd Length: 229  Bit Score: 37.46  E-value: 4.62e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 593416183  141 WDPEKQDKFLNKRKYYRPR----------------------KMNRFLKHVVDTNEISTKEEIQAVKEVFKN 189
Cdd:pfam07766  51 WSKKQKEEKLKKRLKARLEvakflqetveeslsdettelkeEFKEFFKKVRSGGEPPSNEEILKVAKLFKD 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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