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Conserved domains on  [gi|1210511441|dbj|GAX29255|]
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hypothetical protein FisN_16Hu316 [Fistulifera solaris]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TMEM128 pfam20479
TMEM128 protein; This entry represents the uncharacterized TMEM128 protein which contains four ...
 30-150 3.42e-20

TMEM128 protein; This entry represents the uncharacterized TMEM128 protein which contains four transmembrane helices. This protein is resident in the endoplasmic reticulum.


:

Pssm-ID: 466628  Cd Length: 124  Bit Score: 81.13  E-value: 3.42e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1210511441  30 KALLRLQRLVYLSLSLFGLYKLHFYRAIFVSVRIRHVPFQWGLALTIAMFFIKAYVELYQGRLhqQRVNYQNFRQTTHLF 109
Cdd:pfam20479   2 RLRDKLEALLWILAALAILYYTDFVRVLLYDERINRLWFYLGLLLLGVNLLIFLYLIVYLPYI--KRVSYENWEKYYPRA 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1210511441 110 L----LLWTMTSVCFFVALWPHYKWNTFLVLFLLAFGVVLQFLLL 150
Cdd:pfam20479  80 IpiatVSGVVSFICFIIALWPVWGFLTPLILFVLFMGVIVVLSFL 124
 
Name Accession Description Interval E-value
TMEM128 pfam20479
TMEM128 protein; This entry represents the uncharacterized TMEM128 protein which contains four ...
 30-150 3.42e-20

TMEM128 protein; This entry represents the uncharacterized TMEM128 protein which contains four transmembrane helices. This protein is resident in the endoplasmic reticulum.


Pssm-ID: 466628  Cd Length: 124  Bit Score: 81.13  E-value: 3.42e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1210511441  30 KALLRLQRLVYLSLSLFGLYKLHFYRAIFVSVRIRHVPFQWGLALTIAMFFIKAYVELYQGRLhqQRVNYQNFRQTTHLF 109
Cdd:pfam20479   2 RLRDKLEALLWILAALAILYYTDFVRVLLYDERINRLWFYLGLLLLGVNLLIFLYLIVYLPYI--KRVSYENWEKYYPRA 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1210511441 110 L----LLWTMTSVCFFVALWPHYKWNTFLVLFLLAFGVVLQFLLL 150
Cdd:pfam20479  80 IpiatVSGVVSFICFIIALWPVWGFLTPLILFVLFMGVIVVLSFL 124
 
Name Accession Description Interval E-value
TMEM128 pfam20479
TMEM128 protein; This entry represents the uncharacterized TMEM128 protein which contains four ...
 30-150 3.42e-20

TMEM128 protein; This entry represents the uncharacterized TMEM128 protein which contains four transmembrane helices. This protein is resident in the endoplasmic reticulum.


Pssm-ID: 466628  Cd Length: 124  Bit Score: 81.13  E-value: 3.42e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1210511441  30 KALLRLQRLVYLSLSLFGLYKLHFYRAIFVSVRIRHVPFQWGLALTIAMFFIKAYVELYQGRLhqQRVNYQNFRQTTHLF 109
Cdd:pfam20479   2 RLRDKLEALLWILAALAILYYTDFVRVLLYDERINRLWFYLGLLLLGVNLLIFLYLIVYLPYI--KRVSYENWEKYYPRA 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1210511441 110 L----LLWTMTSVCFFVALWPHYKWNTFLVLFLLAFGVVLQFLLL 150
Cdd:pfam20479  80 IpiatVSGVVSFICFIIALWPVWGFLTPLILFVLFMGVIVVLSFL 124
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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