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Conserved domains on  [gi|1451192454|dbj|GBZ66950|]
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membrane protein [Staphylococcus aureus]

Protein Classification

DUF3267 domain-containing protein( domain architecture ID 10569430)

DUF3267 domain-containing protein similar to Streptococcus criceti surface antigen negative regulator Par

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3267 pfam11667
Putative zincin peptidase; This family of proteins has a conserved HEXXH motif, suggesting the ...
 59-158 5.70e-11

Putative zincin peptidase; This family of proteins has a conserved HEXXH motif, suggesting the members are putative peptidases of zincin fold.


:

Pssm-ID: 431992  Cd Length: 106  Bit Score: 56.86  E-value: 5.70e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1451192454  59 FMTYPLHKSIHLLFFLPYRKSFKVH-KLTKRKWLIFYNTYVNQPVHKFYFCINLILPLIILSAMFVYLTISFPQYGHYLM 137
Cdd:pfam11667   1 LLLVILHELLHGLFFKLFGKKPSKKvKFGFKKLGPAYATSSEPLFSKKQFIIILLAPFVIIGILLLLLSLLFPSYAHYLY 80

                          90       100
                  ....*....|....*....|.
gi 1451192454 138 FLLALNFGISITDLLYLKIII 158
Cdd:pfam11667  81 LLLAINTAGSAGDLYILLLLL 101
 
Name Accession Description Interval E-value
DUF3267 pfam11667
Putative zincin peptidase; This family of proteins has a conserved HEXXH motif, suggesting the ...
 59-158 5.70e-11

Putative zincin peptidase; This family of proteins has a conserved HEXXH motif, suggesting the members are putative peptidases of zincin fold.


Pssm-ID: 431992  Cd Length: 106  Bit Score: 56.86  E-value: 5.70e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1451192454  59 FMTYPLHKSIHLLFFLPYRKSFKVH-KLTKRKWLIFYNTYVNQPVHKFYFCINLILPLIILSAMFVYLTISFPQYGHYLM 137
Cdd:pfam11667   1 LLLVILHELLHGLFFKLFGKKPSKKvKFGFKKLGPAYATSSEPLFSKKQFIIILLAPFVIIGILLLLLSLLFPSYAHYLY 80

                          90       100
                  ....*....|....*....|.
gi 1451192454 138 FLLALNFGISITDLLYLKIII 158
Cdd:pfam11667  81 LLLAINTAGSAGDLYILLLLL 101
 
Name Accession Description Interval E-value
DUF3267 pfam11667
Putative zincin peptidase; This family of proteins has a conserved HEXXH motif, suggesting the ...
 59-158 5.70e-11

Putative zincin peptidase; This family of proteins has a conserved HEXXH motif, suggesting the members are putative peptidases of zincin fold.


Pssm-ID: 431992  Cd Length: 106  Bit Score: 56.86  E-value: 5.70e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1451192454  59 FMTYPLHKSIHLLFFLPYRKSFKVH-KLTKRKWLIFYNTYVNQPVHKFYFCINLILPLIILSAMFVYLTISFPQYGHYLM 137
Cdd:pfam11667   1 LLLVILHELLHGLFFKLFGKKPSKKvKFGFKKLGPAYATSSEPLFSKKQFIIILLAPFVIIGILLLLLSLLFPSYAHYLY 80

                          90       100
                  ....*....|....*....|.
gi 1451192454 138 FLLALNFGISITDLLYLKIII 158
Cdd:pfam11667  81 LLLAINTAGSAGDLYILLLLL 101
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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