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Conserved domains on  [gi|1903080421|dbj|GGY05167|]
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aminoglycoside phosphotransferase [Streptomyces djakartensis]

Protein Classification

aminoglycoside phosphotransferase family protein( domain architecture ID 1000867)

aminoglycoside phosphotransferase family protein catalyzes the phosphorylation of small molecule substrates such as aminoglycoside antibiotics and N-acetylhexosamine; similar to Streptomyces rubrogriseu 3-hydroxyasparagine phosphotransferase

EC:  2.7.1.-
Gene Ontology:  GO:0005524|GO:0016310

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
CotS COG0510
Thiamine kinase or a related kinase [Coenzyme transport and metabolism];
148-250 6.11e-06

Thiamine kinase or a related kinase [Coenzyme transport and metabolism];


:

Pssm-ID: 440276 [Multi-domain]  Cd Length: 156  Bit Score: 45.16  E-value: 6.11e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903080421 148 EQSPELPDFDRALLSDTLSGLSAAISSDKAGDQLLHGEPHPGNLLKTSRGPL-FVDLATCCRGPIEFDLAHAPQEVG--- 223
Cdd:COG0510    18 ERYLALGPRDLPELLRRLEELERALAARPLPLVLCHGDLHPGNFLVTDDGRLyLIDWEYAGLGDPAFDLAALLVEYGlsp 97
                          90       100       110
                  ....*....|....*....|....*....|....
gi 1903080421 224 -------RHYAGADHDLIHRCRALNWAMFSAWRW 250
Cdd:COG0510    98 eqaeellEAYGFGRPTEELLRRLRAYRALADLLW 131
SrkA super family cl34459
Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist [Signal ...
44-276 2.69e-05

Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist [Signal transduction mechanisms]; Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist is part of the Pathway/BioSystem: Threonine biosynthesis


The actual alignment was detected with superfamily member COG2334:

Pssm-ID: 441905 [Multi-domain]  Cd Length: 297  Bit Score: 44.53  E-value: 2.69e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903080421  44 DVLARVAPSGHLADAE--FEVEVARRLADVDAPVAELERRVEPRVYLRDA-FAISLWTYYEpvGSEIA---PADYADV-- 115
Cdd:COG2334    38 RYVLKLYRPGRWSPEEipFELALLAHLAAAGLPVPAPVPTRDGETLLELEgRPAALFPFLP--GRSPEepsPEQLEELgr 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903080421 116 FLRH-HAALRQIDLDAPHFTDRVAVALREV-NDREQSPElpdfDRALLSDTLSGLSAAISSDKAGD--QLLHGEPHPGNL 191
Cdd:COG2334   116 LLARlHRALADFPRPNARDLAWWDELLERLlGPLLPDPE----DRALLEELLDRLEARLAPLLGALprGVIHGDLHPDNV 191
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903080421 192 L-KTSRGPLFVDLATCCRGPIEFDLA------HAPQEVGRHYA-------------GADHDLIHRCRALNWAMFSAWRWR 251
Cdd:COG2334   192 LfDGDGVSGLIDFDDAGYGPRLYDLAialngwADGPLDPARLAallegyravrpltEAELAALPPLLRLRALRFLAWRLR 271
                         250       260
                  ....*....|....*....|....*.
gi 1903080421 252 RDDQM-PDRDHWRVEGLNQLRAALDR 276
Cdd:COG2334   272 RVRAKdPAFERYLRRQIALAWAALEA 297
 
Name Accession Description Interval E-value
CotS COG0510
Thiamine kinase or a related kinase [Coenzyme transport and metabolism];
148-250 6.11e-06

Thiamine kinase or a related kinase [Coenzyme transport and metabolism];


Pssm-ID: 440276 [Multi-domain]  Cd Length: 156  Bit Score: 45.16  E-value: 6.11e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903080421 148 EQSPELPDFDRALLSDTLSGLSAAISSDKAGDQLLHGEPHPGNLLKTSRGPL-FVDLATCCRGPIEFDLAHAPQEVG--- 223
Cdd:COG0510    18 ERYLALGPRDLPELLRRLEELERALAARPLPLVLCHGDLHPGNFLVTDDGRLyLIDWEYAGLGDPAFDLAALLVEYGlsp 97
                          90       100       110
                  ....*....|....*....|....*....|....
gi 1903080421 224 -------RHYAGADHDLIHRCRALNWAMFSAWRW 250
Cdd:COG0510    98 eqaeellEAYGFGRPTEELLRRLRAYRALADLLW 131
SrkA COG2334
Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist [Signal ...
44-276 2.69e-05

Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist [Signal transduction mechanisms]; Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist is part of the Pathway/BioSystem: Threonine biosynthesis


Pssm-ID: 441905 [Multi-domain]  Cd Length: 297  Bit Score: 44.53  E-value: 2.69e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903080421  44 DVLARVAPSGHLADAE--FEVEVARRLADVDAPVAELERRVEPRVYLRDA-FAISLWTYYEpvGSEIA---PADYADV-- 115
Cdd:COG2334    38 RYVLKLYRPGRWSPEEipFELALLAHLAAAGLPVPAPVPTRDGETLLELEgRPAALFPFLP--GRSPEepsPEQLEELgr 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903080421 116 FLRH-HAALRQIDLDAPHFTDRVAVALREV-NDREQSPElpdfDRALLSDTLSGLSAAISSDKAGD--QLLHGEPHPGNL 191
Cdd:COG2334   116 LLARlHRALADFPRPNARDLAWWDELLERLlGPLLPDPE----DRALLEELLDRLEARLAPLLGALprGVIHGDLHPDNV 191
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903080421 192 L-KTSRGPLFVDLATCCRGPIEFDLA------HAPQEVGRHYA-------------GADHDLIHRCRALNWAMFSAWRWR 251
Cdd:COG2334   192 LfDGDGVSGLIDFDDAGYGPRLYDLAialngwADGPLDPARLAallegyravrpltEAELAALPPLLRLRALRFLAWRLR 271
                         250       260
                  ....*....|....*....|....*.
gi 1903080421 252 RDDQM-PDRDHWRVEGLNQLRAALDR 276
Cdd:COG2334   272 RVRAKdPAFERYLRRQIALAWAALEA 297
APH pfam01636
Phosphotransferase enzyme family; This family consists of bacterial antibiotic resistance ...
45-218 2.28e-04

Phosphotransferase enzyme family; This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.


Pssm-ID: 426359 [Multi-domain]  Cd Length: 239  Bit Score: 41.72  E-value: 2.28e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903080421  45 VLARVAPSGHLADAEFEVEVARRLADVDA-PVAELERRVEPRVYLRDAFAisLWTY-----YEPVGSEIAPADYADVFLR 118
Cdd:pfam01636  24 VLRLPPPGRAAEELRRELALLRHLAAAGVpPVPRVLAGCTDAELLGLPFL--LMEYlpgevLARPLLPEERGALLEALGR 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903080421 119 HHAALRQIDLDAPHFTDR------VAVALREVNDREQSPELPDFDRALLSDTLSGLSAAISSDKAGdQLLHGEPHPGNLL 192
Cdd:pfam01636 102 ALARLHAVDPAALPLAGRlarlleLLRQLEAALARLLAAELLDRLEELEERLLAALLALLPAELPP-VLVHGDLHPGNLL 180
                         170       180
                  ....*....|....*....|....*...
gi 1903080421 193 KTSRGPL--FVDLATCCRGPIEFDLAHA 218
Cdd:pfam01636 181 VDPGGRVsgVIDFEDAGLGDPAYDLAIL 208
PRK11768 PRK11768
serine/threonine protein kinase;
182-210 7.62e-03

serine/threonine protein kinase;


Pssm-ID: 236974 [Multi-domain]  Cd Length: 325  Bit Score: 37.45  E-value: 7.62e-03
                          10        20
                  ....*....|....*....|....*....
gi 1903080421 182 LHGEPHPGNLLKTSrGPLFVDLATCCRGP 210
Cdd:PRK11768  199 LHGDCHPGNILWRD-GPHFVDLDDARMGP 226
 
Name Accession Description Interval E-value
CotS COG0510
Thiamine kinase or a related kinase [Coenzyme transport and metabolism];
148-250 6.11e-06

Thiamine kinase or a related kinase [Coenzyme transport and metabolism];


Pssm-ID: 440276 [Multi-domain]  Cd Length: 156  Bit Score: 45.16  E-value: 6.11e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903080421 148 EQSPELPDFDRALLSDTLSGLSAAISSDKAGDQLLHGEPHPGNLLKTSRGPL-FVDLATCCRGPIEFDLAHAPQEVG--- 223
Cdd:COG0510    18 ERYLALGPRDLPELLRRLEELERALAARPLPLVLCHGDLHPGNFLVTDDGRLyLIDWEYAGLGDPAFDLAALLVEYGlsp 97
                          90       100       110
                  ....*....|....*....|....*....|....
gi 1903080421 224 -------RHYAGADHDLIHRCRALNWAMFSAWRW 250
Cdd:COG0510    98 eqaeellEAYGFGRPTEELLRRLRAYRALADLLW 131
SrkA COG2334
Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist [Signal ...
44-276 2.69e-05

Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist [Signal transduction mechanisms]; Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist is part of the Pathway/BioSystem: Threonine biosynthesis


Pssm-ID: 441905 [Multi-domain]  Cd Length: 297  Bit Score: 44.53  E-value: 2.69e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903080421  44 DVLARVAPSGHLADAE--FEVEVARRLADVDAPVAELERRVEPRVYLRDA-FAISLWTYYEpvGSEIA---PADYADV-- 115
Cdd:COG2334    38 RYVLKLYRPGRWSPEEipFELALLAHLAAAGLPVPAPVPTRDGETLLELEgRPAALFPFLP--GRSPEepsPEQLEELgr 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903080421 116 FLRH-HAALRQIDLDAPHFTDRVAVALREV-NDREQSPElpdfDRALLSDTLSGLSAAISSDKAGD--QLLHGEPHPGNL 191
Cdd:COG2334   116 LLARlHRALADFPRPNARDLAWWDELLERLlGPLLPDPE----DRALLEELLDRLEARLAPLLGALprGVIHGDLHPDNV 191
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903080421 192 L-KTSRGPLFVDLATCCRGPIEFDLA------HAPQEVGRHYA-------------GADHDLIHRCRALNWAMFSAWRWR 251
Cdd:COG2334   192 LfDGDGVSGLIDFDDAGYGPRLYDLAialngwADGPLDPARLAallegyravrpltEAELAALPPLLRLRALRFLAWRLR 271
                         250       260
                  ....*....|....*....|....*.
gi 1903080421 252 RDDQM-PDRDHWRVEGLNQLRAALDR 276
Cdd:COG2334   272 RVRAKdPAFERYLRRQIALAWAALEA 297
APH pfam01636
Phosphotransferase enzyme family; This family consists of bacterial antibiotic resistance ...
45-218 2.28e-04

Phosphotransferase enzyme family; This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.


Pssm-ID: 426359 [Multi-domain]  Cd Length: 239  Bit Score: 41.72  E-value: 2.28e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903080421  45 VLARVAPSGHLADAEFEVEVARRLADVDA-PVAELERRVEPRVYLRDAFAisLWTY-----YEPVGSEIAPADYADVFLR 118
Cdd:pfam01636  24 VLRLPPPGRAAEELRRELALLRHLAAAGVpPVPRVLAGCTDAELLGLPFL--LMEYlpgevLARPLLPEERGALLEALGR 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903080421 119 HHAALRQIDLDAPHFTDR------VAVALREVNDREQSPELPDFDRALLSDTLSGLSAAISSDKAGdQLLHGEPHPGNLL 192
Cdd:pfam01636 102 ALARLHAVDPAALPLAGRlarlleLLRQLEAALARLLAAELLDRLEELEERLLAALLALLPAELPP-VLVHGDLHPGNLL 180
                         170       180
                  ....*....|....*....|....*...
gi 1903080421 193 KTSRGPL--FVDLATCCRGPIEFDLAHA 218
Cdd:pfam01636 181 VDPGGRVsgVIDFEDAGLGDPAYDLAIL 208
YcbJ COG3173
Predicted kinase, aminoglycoside phosphotransferase (APT) family [General function prediction ...
34-218 4.22e-03

Predicted kinase, aminoglycoside phosphotransferase (APT) family [General function prediction only];


Pssm-ID: 442406 [Multi-domain]  Cd Length: 284  Bit Score: 37.79  E-value: 4.22e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903080421  34 DRIALRLVPcdvlaRVAPSGHlaDAEFEVEVARRLAD-VDAPVAELERRVEPRVYLRDAFAISLW------TYYEPVGSE 106
Cdd:COG3173    43 DRLVLRRPP-----RGLASAH--DVRREARVLRALAPrLGVPVPRPLALGEDGEVIGAPFYVMEWvegetlEDALPDLSP 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903080421 107 IAPADYADVFLRHHAALRQIDLDAPHFTDRVAVALREVNDR-----EQSPELPDFDRALLSDTLSGLSAAISSDKAgDQL 181
Cdd:COG3173   116 AERRALARALGEFLAALHAVDPAAAGLADGRPEGLERQLARwraqlRRALARTDDLPALRERLAAWLAANLPEWGP-PVL 194
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1903080421 182 LHGEPHPGNLL---KTSRGPLFVDLATCCRGPIEFDLAHA 218
Cdd:COG3173   195 VHGDLRPGNLLvdpDDGRLTAVIDWELATLGDPAADLAYL 234
PRK11768 PRK11768
serine/threonine protein kinase;
182-210 7.62e-03

serine/threonine protein kinase;


Pssm-ID: 236974 [Multi-domain]  Cd Length: 325  Bit Score: 37.45  E-value: 7.62e-03
                          10        20
                  ....*....|....*....|....*....
gi 1903080421 182 LHGEPHPGNLLKTSrGPLFVDLATCCRGP 210
Cdd:PRK11768  199 LHGDCHPGNILWRD-GPHFVDLDDARMGP 226
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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