|
Name |
Accession |
Description |
Interval |
E-value |
| PRK11388 |
PRK11388 |
DNA-binding transcriptional regulator DhaR; Provisional |
1-638 |
0e+00 |
|
DNA-binding transcriptional regulator DhaR; Provisional
Pssm-ID: 183114 [Multi-domain] Cd Length: 638 Bit Score: 1143.26 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 1 MTAHTHSIGKEVSSVIAQSWHRCSKFMQRETWQAPHQAQGLTFESICRRKTALLTIAQAALEDAWEFMDGRPCALLILDE 80
Cdd:PRK11388 1 MSGAFNNDGRGISPLIATSWERCNKLMKRETWNVPHQAQGVTFASIYRRKKALLTLGQAALEDAWEYMADRECALLILDE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 81 SACILSRCGDPQTVEQLAELGFRDGSYCAESIIGSCALSLATMPGQPTKTSGDQHFKQALHPWSFCSTPVFDNHGRLFGS 160
Cdd:PRK11388 81 TGCILSRNGDPQTLQQLSALGFNDGTYCAEGIIGTNALSLAAISGQPVKTMGDQHFKQALHNWAFCATPVFDSKGRLTGT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 161 ISLCCLVEHECVSDLSLTLAIAREVGNSLLTDSLLAESNRHLNQMYGLLESMDDGVMAWNEQGVLQFLNARAALLLHLDA 240
Cdd:PRK11388 161 IALACPVEQTSAADLPLTLSIAREVGNLLLTDSLLAESNRHLNQLNALLESMDDGVIAWDEQGNLQFLNAQAARLLRLDA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 241 QASQGKNIHDLLNLPMLLRRAIKHARGLNHVEVTFESQHQFVDAVITLKPIVEEQGNSFILLLHPVEQMRQLMTSQLGKV 320
Cdd:PRK11388 241 TASQGRAITELLTLPAVLQQAIKQAHPLKHVEVTFESQGQFIDAVITLKPIIEGQGTSFILLLHPVEQMRQLMTSQLGKV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 321 SHTFEQMSTDDPETRRLIHFGRQAARGSFPILLCGEEGVGKELLSQAIHNESERASGPYIAVNCQLYANSVLGQDFMGSA 400
Cdd:PRK11388 321 SHTFDHMPQDSPQMRRLIHFGRQAAKSSFPVLLCGEEGVGKALLAQAIHNESERAAGPYIAVNCQLYPDEALAEEFLGSD 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 401 PTDDENGRLSRLELANGGTLFLEKIEYLAPELQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQ 480
Cdd:PRK11388 401 RTDSENGRLSKFELAHGGTLFLEKVEYLSPELQSALLQVLKTGVITRLDSRRLIPVDVRVIATTTADLAMLVEQNRFSRQ 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 481 LYYALHSFEIVIPPLRARRSSIPSLIFTRLNSLKKRFSYSLKIDDDALAQLVAYSWPGNDFELNSIIENIAISSDNGHIR 560
Cdd:PRK11388 481 LYYALHAFEITIPPLRMRREDIPALVNNKLRSLEKRFSTRLKIDDDALARLVSYRWPGNDFELRSVIENLALSSDNGRIR 560
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2131433501 561 LSNLPDYLFAERPGLETASSLLPASLTFTAIEKEAIIHAARVTSGRVQEMSQLLNIGRTTLWRKMKQYDIDASQFKRK 638
Cdd:PRK11388 561 LSDLPEHLFTEQATDDVSATRLSTSLSLAELEKEAIINAAQVCGGRIQEMAALLGIGRTTLWRKMKQHGIDAGQFKRR 638
|
|
| AcoR |
COG3284 |
Transcriptional regulator DhaR of acetoin/glycerol metabolism [Transcription]; |
12-629 |
1.43e-172 |
|
Transcriptional regulator DhaR of acetoin/glycerol metabolism [Transcription];
Pssm-ID: 442514 [Multi-domain] Cd Length: 625 Bit Score: 505.59 E-value: 1.43e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 12 VSSVIAQSWHRCSKF-MQRETWQAPHQAQGLTFESICRRKTALLTIAQAALEDAWEFMDGRPCALLILDESACILSRCGD 90
Cdd:COG3284 24 VRPLIARSWQRCREYgLDPDRPPAPRVLSGAELRELRERNEELLRAARPVLERLYEQLAGSGSVVLLTDADGVILDTLGD 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 91 PQTVEQLAELGFRDGSYCAESIIGSCALSLATMPGQPTKTSGDQHFKQALHPWSFCSTPVFDNHGRLFGSISLCCLVEHE 170
Cdd:COG3284 104 PRFLDRARRVGLAPGADWSEEARGTNAIGTALAEGRPVTVHGAEHFLEANHGLTCSAAPIFDPDGRLLGVLDISGPARSS 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 171 CVSDLSLTLAIAREVGNSLLTDSLLAESNRHLNQMYGLLESMDDGVMAWNEQGVLQFLNARAALLLHLDAQASQGKNIHD 250
Cdd:COG3284 184 QPHTLALVRAAARRIENRLFLRSFRREWRLRLHFLPEFLGSLSEGLLAFDEDGRIVAANRAARRLLGLADAALLGRPLEE 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 251 LLNLPMllrraikharglnhveVTFESQHQfvDAVITLKPIVEEQGNSF--ILLLHPVEQMRQLMTSQlGKVSHTFEQMS 328
Cdd:COG3284 264 LFGLDL----------------EALPDGAR--RAPASPRPLRLRDGRRLgaLLRLRPARRAARAAPAG-APAPAALAALA 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 329 TDDPETRRLIHFGRQAARGSFPILLCGEEGVGKELLSQAIHNESERASGPYIAVNCQLYANSVLGQDFMGSAP----TDD 404
Cdd:COG3284 325 GGDPAMRRALRRARRLADRDIPVLILGETGTGKELFARAIHAASPRADGPFVAVNCAAIPEELIESELFGYEPgaftGAR 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 405 ENGRLSRLELANGGTLFLEKIEYLAPELQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQLYYA 484
Cdd:COG3284 405 RKGRPGKIEQADGGTLFLDEIGDMPLALQARLLRVLQEREVTPLGGTKPIPVDVRLIAATHRDLRELVAAGRFREDLYYR 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 485 LHSFEIVIPPLRArRSSIPSLIFTRLNSLKKRFSySLKIDDDALAQLVAYSWPGNDFELNSIIENIAISSDNGHIRLSNL 564
Cdd:COG3284 485 LNGLTLTLPPLRE-REDLPALIEHLLRELAAGRG-PLRLSPEALALLAAYPWPGNVRELRNVLRTALALADGGVITVEDL 562
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2131433501 565 PDYLFAERPGLETASSllPASLTFTAIEKEAIIHAARVTSGRVQEMSQLLNIGRTTLWRKMKQYD 629
Cdd:COG3284 563 PDELRAELAAAAPAAA--APLTSLEEAERDAILRALRACGGNVSAAARALGISRSTLYRKLKRYG 625
|
|
| RocR |
COG3829 |
RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis ... |
195-631 |
1.43e-101 |
|
RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains [Transcription, Signal transduction mechanisms];
Pssm-ID: 443041 [Multi-domain] Cd Length: 448 Bit Score: 316.71 E-value: 1.43e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 195 LAESNRHLNQmygLLESMDDGVMAWNEQGVLQFLNARAALLLHLDAQASQGKNIHDLLNLPMLLRrAIKhaRGLNHVEVT 274
Cdd:COG3829 6 LKELEEELEA---ILDSLDDGIIVVDADGRITYVNRAAERILGLPREEVIGKNVTELIPNSPLLE-VLK--TGKPVTGVI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 275 FESQHQFVDAVITLKPIVEeQGN--SFILLLHPVEQMRQLM-------TSQLGKVSHTFEQMSTDDPETRRLIHFGRQAA 345
Cdd:COG3829 80 QKTGGKGKTVIVTAIPIFE-DGEviGAVETFRDITELKRLErklreeeLERGLSAKYTFDDIIGKSPAMKELLELAKRVA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 346 RGSFPILLCGEEGVGKELLSQAIHNESERASGPYIAVNC-----QL-------Y---AnsvlgqdFMGSaptdDENGRLS 410
Cdd:COG3829 159 KSDSTVLILGESGTGKELFARAIHNASPRRDGPFVAVNCaaipeNLleselfgYekgA-------FTGA----KKGGKPG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 411 RLELANGGTLFLEKIEYLAPELQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQLYYALHSFEI 490
Cdd:COG3829 228 LFELADGGTLFLDEIGEMPLSLQAKLLRVLQEKEVRRVGGTKPIPVDVRIIAATNRDLEEMVEEGRFREDLYYRLNVIPI 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 491 VIPPLRARRSSIPSLIFTRLNSLKKRFSYSLK-IDDDALAQLVAYSWPGNDFELNSIIENIAISSDNGHIRLSNLPDYLF 569
Cdd:COG3829 308 HIPPLRERKEDIPLLAEHFLEKFNKKYGKNIKgISPEALELLLAYDWPGNVRELENVIERAVVLSEGDVITPEHLPEYLL 387
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2131433501 570 AERPGlETASSLLPASLTFTAIEKEAIIHAARVTSGRVQEMSQLLNIGRTTLWRKMKQYDID 631
Cdd:COG3829 388 EEAEA-ASAAEEGSLKEALEEVEKELIEEALEKTGGNKSKAAKALGISRSTLYRKLKKYGIK 448
|
|
| AtoC |
COG2204 |
DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, ... |
325-629 |
4.12e-74 |
|
DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains [Signal transduction mechanisms];
Pssm-ID: 441806 [Multi-domain] Cd Length: 418 Bit Score: 244.10 E-value: 4.12e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 325 EQMSTDDPETRRLIHFGRQAARGSFPILLCGEEGVGKELLSQAIHNESERASGPYIAVNCQLYANSVLGQDFMG---SAP 401
Cdd:COG2204 131 SGLIGRSPAMQEVRRLIEKVAPSDATVLITGESGTGKELVARAIHRLSPRADGPFVAVNCAAIPEELLESELFGhekGAF 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 402 TDDENGRLSRLELANGGTLFLEKIEYLAPELQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQL 481
Cdd:COG2204 211 TGAVARRIGKFELADGGTLFLDEIGEMPLALQAKLLRVLQEREFERVGGNKPIPVDVRVIAATNRDLEELVEEGRFREDL 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 482 YYALHSFEIVIPPLRARRSSIPSLIFTRLNSLKKRFSYSLKIDDDALAQLVAYSWPGNDFELNSIIENIAISSDNGHIRL 561
Cdd:COG2204 291 YYRLNVFPIELPPLRERREDIPLLARHFLARFAAELGKPVKLSPEALEALLAYDWPGNVRELENVIERAVILADGEVITA 370
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2131433501 562 SNLPDYLfaerpgletassllpasltfTAIEKEAIIHAARVTSGRVQEMSQLLNIGRTTLWRKMKQYD 629
Cdd:COG2204 371 EDLPEAL--------------------EEVERELIERALEETGGNVSRAAELLGISRRTLYRKLKKYG 418
|
|
| TyrR |
COG3283 |
Transcriptional regulator TyrR of aromatic amino acids metabolism [Transcription, Amino acid ... |
198-539 |
1.36e-51 |
|
Transcriptional regulator TyrR of aromatic amino acids metabolism [Transcription, Amino acid transport and metabolism];
Pssm-ID: 442513 [Multi-domain] Cd Length: 514 Bit Score: 186.16 E-value: 1.36e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 198 SNRHLNQMYGLLESMDDGVMAWNEQGVLQFLNARAALLLHLDAQASQGKNIHDLL---NLPMLLR----RAIKHARGLNH 270
Cdd:COG3283 75 SEREHLELDALLEALPDPVFSIDLKGKIELANPAALSLLGLSEEELIGQPLSELLkgfNFSRWLEsnepRPQSERVVING 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 271 ---------VEVTFESQHQ-FVDAVITLKPIVEEQgnsfilllhpvEQMRQLMTSQLGkvshTFEQMSTDDPETRRLIhf 340
Cdd:COG3283 155 qdyladilpIYLPDEEGKSiLAGAVVTLKSAARLG-----------EQLQALQVNDDS----GFDHIVASSPKMRQVI-- 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 341 gRQAARGSF---PILLCGEEGVGKELLSQAIHNESERASGPYIAVNCQLYANSVLGQDFMGSAPTDDENGRLSR---LEL 414
Cdd:COG3283 218 -RQAKKMAMldaPLLIQGETGTGKELLARACHLASPRGDKPFLALNCAALPDDVAESELFGYAPGAFGNAREGKkglFEQ 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 415 ANGGTLFLEKIEYLAPELQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQLYYALHSFEIVIPP 494
Cdd:COG3283 297 ANGGTVFLDEIGEMSPQLQAKLLRFLQDGTFRRVGEEQEVKVDVRVICATQKDLAELVQEGEFREDLYYRLNVLTLTLPP 376
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 2131433501 495 LRARRSSIPSLifTRLnsLKKRFSYSL-----KIDDDALAQLVAYSWPGN 539
Cdd:COG3283 377 LRERKSDILPL--AEH--FVARFSQQLgrprpRLSPDLVDFLQSYPWPGN 422
|
|
| PEP_resp_reg |
TIGR02915 |
PEP-CTERM-box response regulator transcription factor; Members of this protein family share ... |
303-630 |
1.75e-49 |
|
PEP-CTERM-box response regulator transcription factor; Members of this protein family share full-length homology with (but do not include) the acetoacetate metabolism regulatory protein AtoC (see SP|Q06065). These proteins have a Fis family DNA binding sequence (pfam02954), a response regulator receiver domain (pfam00072), and sigma-54 interaction domain (pfam00158). [Regulatory functions, DNA interactions]
Pssm-ID: 274348 [Multi-domain] Cd Length: 445 Bit Score: 178.79 E-value: 1.75e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 303 LHPVEQMRQLMTSQLGKVShtFEQMSTDDPETRRLIHFGRQAARGSFPILLCGEEGVGKELLSQAIHNESERASGPYIAV 382
Cdd:TIGR02915 119 LYTLETENRRLQSALGGTA--LRGLITSSPGMQKICRTIEKIAPSDITVLLLGESGTGKEVLARALHQLSDRKDKRFVAI 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 383 NCQLYANSVLGQDFMG---SAPTDDENGRLSRLELANGGTLFLEKIEYLAPELQSALLQVIKQGVLTRLDARRLIPVDVK 459
Cdd:TIGR02915 197 NCAAIPENLLESELFGyekGAFTGAVKQTLGKIEYAHGGTLFLDEIGDLPLNLQAKLLRFLQERVIERLGGREEIPVDVR 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 460 VIATTTVDLANLVEQNRFSRQLYYALHSFEIVIPPLRARRSSIPSLIftrlNSLKKRFSYSLK-----IDDDALAQLVAY 534
Cdd:TIGR02915 277 IVCATNQDLKRMIAEGTFREDLFYRIAEISITIPPLRSRDGDAVLLA----NAFLERFARELKrktkgFTDDALRALEAH 352
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 535 SWPGNDFELNSIIENIAISSDNGHIRLSNLPdylFAERPGLETaSSLLPASLTFTAIEKEAIIHAARVTSGRVQEMSQLL 614
Cdd:TIGR02915 353 AWPGNVRELENKVKRAVIMAEGNQITAEDLG---LDARERAET-PLEVNLREVRERAEREAVRKAIARVDGNIARAAELL 428
|
330
....*....|....*.
gi 2131433501 615 NIGRTTLWRKMKQYDI 630
Cdd:TIGR02915 429 GITRPTLYDLMKKHGI 444
|
|
| Sigma54_activat |
pfam00158 |
Sigma-54 interaction domain; |
331-490 |
2.44e-47 |
|
Sigma-54 interaction domain;
Pssm-ID: 425491 [Multi-domain] Cd Length: 168 Bit Score: 164.11 E-value: 2.44e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 331 DPETRRLIHFGRQAARGSFPILLCGEEGVGKELLSQAIHNESERASGPYIAVNCQLYANSVLGQDFMGSAP---TDDENG 407
Cdd:pfam00158 5 SPAMQEVLEQAKRVAPTDAPVLITGESGTGKELFARAIHQLSPRADGPFVAVNCAAIPEELLESELFGHEKgafTGADSD 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 408 RLSRLELANGGTLFLEKIEYLAPELQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQLYYALHS 487
Cdd:pfam00158 85 RKGLFELADGGTLFLDEIGELPLELQAKLLRVLQEGEFERVGGTKPIKVDVRIIAATNRDLEEAVAEGRFREDLYYRLNV 164
|
...
gi 2131433501 488 FEI 490
Cdd:pfam00158 165 IPI 167
|
|
| nifA |
TIGR01817 |
Nif-specific regulatory protein; This model represents NifA, a DNA-binding regulatory protein ... |
330-635 |
4.08e-46 |
|
Nif-specific regulatory protein; This model represents NifA, a DNA-binding regulatory protein for nitrogen fixation. The model produces scores between the trusted and noise cutoffs for a well-described NifA homolog in Aquifex aeolicus (which lacks nitrogenase), for transcriptional activators of alternative nitrogenases (VFe or FeFe instead of MoFe), and truncated forms. [Central intermediary metabolism, Nitrogen fixation, Regulatory functions, DNA interactions]
Pssm-ID: 273817 [Multi-domain] Cd Length: 534 Bit Score: 171.44 E-value: 4.08e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 330 DDPETRRLIHFGRQAARGSFPILLCGEEGVGKELLSQAIHNESERASGPYIAVNCQLYANSVLGQDFMG---SAPTDDEN 406
Cdd:TIGR01817 201 KSPAMRQVVDQARVVARSNSTVLLRGESGTGKELIAKAIHYLSPRAKRPFVKVNCAALSETLLESELFGhekGAFTGAIA 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 407 GRLSRLELANGGTLFLEKIEYLAPELQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQLYYALH 486
Cdd:TIGR01817 281 QRKGRFELADGGTLFLDEIGEISPAFQAKLLRVLQEGEFERVGGNRTLKVDVRLVAATNRDLEEAVAKGEFRADLYYRIN 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 487 SFEIVIPPLRARRSSIPSL---IFTRLNSLKKRfsySLKIDDDALAQLVAYSWPGNDFELNSIIENIAISSDNGHIRLS- 562
Cdd:TIGR01817 361 VVPIFLPPLRERREDIPLLaeaFLEKFNRENGR---PLTITPSAIRVLMSCKWPGNVRELENCLERTATLSRSGTITRSd 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 563 -------NLP--------------DYLFAERPGLETASSLLPAS---LTFTAIEKEAIIhAARVTSGRVQ-EMSQLLNIG 617
Cdd:TIGR01817 438 fscqsgqCLSpmlaktcphghisiDPLAGTTPPHSPASAALPGEpglSGPTLSERERLI-AALEQAGWVQaKAARLLGMT 516
|
330
....*....|....*...
gi 2131433501 618 RTTLWRKMKQYDIDASQF 635
Cdd:TIGR01817 517 PRQVGYALRKLNIEMKKL 534
|
|
| PRK11361 |
PRK11361 |
acetoacetate metabolism transcriptional regulator AtoC; |
283-631 |
1.46e-45 |
|
acetoacetate metabolism transcriptional regulator AtoC;
Pssm-ID: 183099 [Multi-domain] Cd Length: 457 Bit Score: 168.10 E-value: 1.46e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 283 DAVItlKPIVEEQGNSFILLLHPVEQMRQLMTS--QLGKVSHTFEQMSTDDPETRRLIHFGRQAARGSFPILLCGEEGVG 360
Cdd:PRK11361 101 DYVI--KPFDLDELNLIVQRALQLQSMKKEIRHlhQALSTSWQWGHILTNSPAMMDICKDTAKIALSQASVLISGESGTG 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 361 KELLSQAIHNESERASGPYIAVNCQLYANSVLGQDFMG---SAPTDDENGRLSRLELANGGTLFLEKIEYLAPELQSALL 437
Cdd:PRK11361 179 KELIARAIHYNSRRAKGPFIKVNCAALPESLLESELFGhekGAFTGAQTLRQGLFERANEGTLLLDEIGEMPLVLQAKLL 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 438 QVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQLYYALHSFEIVIPPLRARRSSIPSLIftrlNSLKKRF 517
Cdd:PRK11361 259 RILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKEGTFREDLFYRLNVIHLILPPLRDRREDISLLA----NHFLQKF 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 518 SYS-----LKIDDDALAQLVAYSWPGNDFELNSIIENIAISSDNGHIRLSNLPDYLFAERPGLETASSLLPASLTF---- 588
Cdd:PRK11361 335 SSEnqrdiIDIDPMAMSLLTAWSWPGNIRELSNVIERAVVMNSGPIIFSEDLPPQIRQPVCNAGEVKTAPVGERNLkeei 414
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2131433501 589 TAIEKEAIIHAARVTSGRVQEMSQLLNIGRTTLWRKMKQYDID 631
Cdd:PRK11361 415 KRVEKRIIMEVLEQQEGNRTRTALMLGISRRALMYKLQEYGID 457
|
|
| PRK15424 |
PRK15424 |
propionate catabolism operon regulatory protein PrpR; Provisional |
345-627 |
3.98e-45 |
|
propionate catabolism operon regulatory protein PrpR; Provisional
Pssm-ID: 237963 [Multi-domain] Cd Length: 538 Bit Score: 168.74 E-value: 3.98e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 345 ARGSFPILLCGEEGVGKELLSQAIHNE--------SERASGPYIAVNCQLYANSVLGQD--------FMGSAptddENGR 408
Cdd:PRK15424 239 ARSSAAVLIQGETGTGKELAAQAIHREyfarhdarQGKKSHPFVAVNCGAIAESLLEAElfgyeegaFTGSR----RGGR 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 409 LSRLELANGGTLFLEKIEYLAPELQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQLYYALHSF 488
Cdd:PRK15424 315 AGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKEVTRVGGHQPVPVDVRVISATHCDLEEDVRQGRFRRDLFYRLSIL 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 489 EIVIPPLRARRSSIPSLI--FTR--LNSLKKRFSYSLKiddDALAQ----LVAYSWPGNDFELNSIIENIAIS-SDNGHI 559
Cdd:PRK15424 395 RLQLPPLRERVADILPLAesFLKqsLAALSAPFSAALR---QGLQQcetlLLHYDWPGNVRELRNLMERLALFlSVEPTP 471
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2131433501 560 RLSnlPDYLFAERPGLETASSLLPASltftAIEKEAIIHAARVTSGRVQEMSQLLNIGRTTLWRKMKQ 627
Cdd:PRK15424 472 DLT--PQFLQLLLPELARESAKTPAP----RLLAATLQQALERFNGDKTAAANYLGISRTTLWRRLKA 533
|
|
| FhlA |
COG3604 |
FhlA-type transcriptional regulator, contains GAF, AAA-type ATPase, and DNA-binding Fis ... |
330-631 |
1.12e-43 |
|
FhlA-type transcriptional regulator, contains GAF, AAA-type ATPase, and DNA-binding Fis domains [Transcription, Signal transduction mechanisms];
Pssm-ID: 442823 [Multi-domain] Cd Length: 338 Bit Score: 159.63 E-value: 1.12e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 330 DDPETRRLIHFGRQAArgsfpILLCGEEGVGKELLSQAIHNESERASGPYIAVNCqlyansvlgqdfmgSAptddengrl 409
Cdd:COG3604 102 SEEDLRLLETLASLAA-----VAILGETGTGKELVANAIHELSPRADKPFVKVNC--------------AA--------- 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 410 srlelanggtlflekieylapeLQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQLYYALHSFE 489
Cdd:COG3604 154 ----------------------LPESLLESLQEGEFERVGGDETIKVDVRIIAATNRDLEEEVAEGRFREDLYYRLNVFP 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 490 IVIPPLRARRSSIPSLI--FTRLNSLKKRFSySLKIDDDALAQLVAYSWPGNDFELNSIIENIAISSDNGHIRLSNLPDy 567
Cdd:COG3604 212 IRLPPLRERREDIPLLAehFLEKFSRRLGKP-ILRLSPEALEALMAYPWPGNVRELENVIERAVILAEGGVLDADDLAP- 289
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2131433501 568 lfAERPGLEtassllpasltftAIEKEAIIHAARVTSGRVQEMSQLLNIGRTTLWRKMKQYDID 631
Cdd:COG3604 290 --GSREALE-------------EVEREHILEALERTGGNIAGAARLLGLTPSTLRSRMKKLGIK 338
|
|
| PRK10365 |
PRK10365 |
sigma-54-dependent response regulator transcription factor ZraR; |
311-627 |
2.53e-42 |
|
sigma-54-dependent response regulator transcription factor ZraR;
Pssm-ID: 182412 [Multi-domain] Cd Length: 441 Bit Score: 158.66 E-value: 2.53e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 311 QLMTSQLGKVSHTFEQMSTDDPETRRLIHFGRQAARGSFPILLCGEEGVGKELLSQAIHNESERASGPYIAVNCQLYANS 390
Cdd:PRK10365 125 HSIDAETPAVTASQFGMVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAALNES 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 391 VLGQDFMG---SAPTDDENGRLSRLELANGGTLFLEKIEYLAPELQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVD 467
Cdd:PRK10365 205 LLESELFGhekGAFTGADKRREGRFVEADGGTLFLDEIGDISPMMQVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRD 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 468 LANLVEQNRFSRQLYYALHSFEIVIPPLRARRSSIPSLIFTRLNSLKKRFSYSLK-IDDDALAQLVAYSWPGNDFELNSI 546
Cdd:PRK10365 285 LAAEVNAGRFRQDLYYRLNVVAIEVPSLRQRREDIPLLAGHFLQRFAERNRKAVKgFTPQAMDLLIHYDWPGNIRELENA 364
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 547 IENIAISSDNGHIRLSNLPDYLFAERPGLETASSLLPasltFTAIEKEAIIHAARVTSGRVQEMSQLLNIGRTTLWRKMK 626
Cdd:PRK10365 365 VERAVVLLTGEYISERELPLAIASTPIPLGQSQDIQP----LVEVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLS 440
|
.
gi 2131433501 627 Q 627
Cdd:PRK10365 441 R 441
|
|
| PRK15429 |
PRK15429 |
formate hydrogenlyase transcriptional activator FlhA; |
351-631 |
6.39e-38 |
|
formate hydrogenlyase transcriptional activator FlhA;
Pssm-ID: 237965 [Multi-domain] Cd Length: 686 Bit Score: 149.60 E-value: 6.39e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 351 ILLCGEEGVGKELLSQAIHNESERASGPYIAVNCQLYANSVLGQDFMG---SAPTDDENGRLSRLELANGGTLFLEKIEY 427
Cdd:PRK15429 402 VLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDLFGherGAFTGASAQRIGRFELADKSSLFLDEVGD 481
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 428 LAPELQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQLYYALHSFEIVIPPLRARRSSIPSLIF 507
Cdd:PRK15429 482 MPLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVFPIHLPPLRERPEDIPLLVK 561
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 508 TRLNSLKKRFSYSL-KIDDDALAQLVAYSWPGNDFELNSIIENIAISSDNGHIRLSnLPDYLFAErPGLETASSLLPASl 586
Cdd:PRK15429 562 AFTFKIARRMGRNIdSIPAETLRTLSNMEWPGNVRELENVIERAVLLTRGNVLQLS-LPDITLPE-PETPPAATVVAQE- 638
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 2131433501 587 tfTAIEKEAIIHAARVTSGRV---QEMSQLLNIGRTTLWRKMKQYDID 631
Cdd:PRK15429 639 --GEDEYQLIVRVLKETNGVVagpKGAAQRLGLKRTTLLSRMKRLGID 684
|
|
| PRK15115 |
PRK15115 |
response regulator GlrR; Provisional |
325-636 |
5.38e-37 |
|
response regulator GlrR; Provisional
Pssm-ID: 185070 [Multi-domain] Cd Length: 444 Bit Score: 143.44 E-value: 5.38e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 325 EQMSTDDPETRRLIHFGRQAARGSFPILLCGEEGVGKELLSQAIHNESERASGPYIAVNCQLYANSVLGQDFMGSAP--- 401
Cdd:PRK15115 134 EAIVTRSPLMLRLLEQARMVAQSDVSVLINGQSGTGKEILAQAIHNASPRASKPFIAINCGALPEQLLESELFGHARgaf 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 402 TDDENGRLSRLELANGGTLFLEKIEYLAPELQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQL 481
Cdd:PRK15115 214 TGAVSNREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDIDVRIISATHRDLPKAMARGEFREDL 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 482 YYALHSFEIVIPPLRARRSSIPSLIFTRLNSLKKRFSYSLK-IDDDALAQLVAYSWPGNDFELNSIIEN-IAISSDnghi 559
Cdd:PRK15115 294 YYRLNVVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVRaFSTDAMKRLMTASWPGNVRQLVNVIEQcVALTSS---- 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 560 rlSNLPDYLFAErpGLETASSLLPaslTFTAIEKEAIIHAAR----VTSGRVQEMSQLLNIGRTTLWRKMKQYDIDASQF 635
Cdd:PRK15115 370 --PVISDALVEQ--ALEGENTALP---TFVEARNQFELNYLRkllqITKGNVTHAARMAGRNRTEFYKLLSRHELDANDF 442
|
.
gi 2131433501 636 K 636
Cdd:PRK15115 443 K 443
|
|
| glnG |
PRK10923 |
nitrogen regulation protein NR(I); Provisional |
345-631 |
5.51e-36 |
|
nitrogen regulation protein NR(I); Provisional
Pssm-ID: 182842 [Multi-domain] Cd Length: 469 Bit Score: 141.16 E-value: 5.51e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 345 ARGSFPILLCGEEGVGKELLSQAIHNESERASGPYIAVNCQLYANSVLGQDFMG---SAPTDDENGRLSRLELANGGTLF 421
Cdd:PRK10923 158 SRSSISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGhekGAFTGANTIRQGRFEQADGGTLF 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 422 LEKIEYLAPELQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQLYYALHSFEIVIPPLRARRSS 501
Cdd:PRK10923 238 LDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERRED 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 502 IPSLIFTRLNSLKKRFSYSLKI-DDDALAQLVAYSWPGNDFELNSIIENIAISSDNGHIRLSNLPDYLFaERPGLETASS 580
Cdd:PRK10923 318 IPRLARHFLQVAARELGVEAKLlHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELF-ESTVPESTSQ 396
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2131433501 581 LLPAS----LTFTA------------------IEKEAIIHAARVTSGRVQEMSQLLNIGRTTLWRKMKQYDID 631
Cdd:PRK10923 397 MQPDSwatlLAQWAdralrsghqnllseaqpeLERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME 469
|
|
| phageshock_pspF |
TIGR02974 |
psp operon transcriptional activator PspF; Members of this protein family are PspF, the ... |
343-548 |
7.17e-36 |
|
psp operon transcriptional activator PspF; Members of this protein family are PspF, the sigma-54-dependent transcriptional activator of the phage shock protein (psp) operon, in Escherichia coli and numerous other species. The psp operon is induced by a number of stress conditions, including heat shock, ethanol, and filamentous phage infection. Changed com_name to adhere to TIGR role notes conventions. 09/15/06 - DMH [Regulatory functions, DNA interactions]
Pssm-ID: 274371 [Multi-domain] Cd Length: 329 Bit Score: 137.81 E-value: 7.17e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 343 QAARGSFPILLCGEEGVGKELLSQAIHNESERASGPYIAVNCQLYANSVLGQDFMG---SAPTDDENGRLSRLELANGGT 419
Cdd:TIGR02974 17 RLAPLDRPVLIIGERGTGKELIAARLHYLSKRWQGPLVKLNCAALSENLLDSELFGheaGAFTGAQKRHQGRFERADGGT 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 420 LFLEKIEYLAPELQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQLYYALhSFEIV-IPPLRAR 498
Cdd:TIGR02974 97 LFLDELATASLLVQEKLLRVIEYGEFERVGGSQTLQVDVRLVCATNADLPALAAEGRFRADLLDRL-AFDVItLPPLRER 175
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 2131433501 499 RSSIPSLI--FTRLNSLKKRFSYSLKIDDDALAQLVAYSWPGNDFELNSIIE 548
Cdd:TIGR02974 176 QEDIMLLAehFAIRMARELGLPLFPGFTPQAREQLLEYHWPGNVRELKNVVE 227
|
|
| PRK05022 |
PRK05022 |
nitric oxide reductase transcriptional regulator NorR; |
349-543 |
1.05e-35 |
|
nitric oxide reductase transcriptional regulator NorR;
Pssm-ID: 235331 [Multi-domain] Cd Length: 509 Bit Score: 141.08 E-value: 1.05e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 349 FPILLCGEEGVGKELLSQAIHNESERASGPYIAVNCQLYANSVLGQDFMG---SAPTDDENGRLSRLELANGGTLFLEKI 425
Cdd:PRK05022 211 LNVLILGETGVGKELVARAIHAASPRADKPLVYLNCAALPESLAESELFGhvkGAFTGAISNRSGKFELADGGTLFLDEI 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 426 EYLAPELQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQLYYALHSFEIVIPPLRARRSSIPSL 505
Cdd:PRK05022 291 GELPLALQAKLLRVLQYGEIQRVGSDRSLRVDVRVIAATNRDLREEVRAGRFRADLYHRLSVFPLSVPPLRERGDDVLLL 370
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 2131433501 506 --IFTRLNSLKKRFSySLKIDDDALAQLVAYSWPGNDFEL 543
Cdd:PRK05022 371 agYFLEQNRARLGLR-SLRLSPAAQAALLAYDWPGNVREL 409
|
|
| PRK10820 |
PRK10820 |
transcriptional regulator TyrR; |
198-546 |
1.83e-33 |
|
transcriptional regulator TyrR;
Pssm-ID: 236769 [Multi-domain] Cd Length: 520 Bit Score: 134.81 E-value: 1.83e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 198 SNRHLNQMYGLLESMDDGVMAWNEQGVLQFLNARAALLLHLDAQASQGKNIHDLLNLPMLLR-----RAIKHA-----RG 267
Cdd:PRK10820 75 SEREHRALSALLEALPEPVLSIDMKGKVELANPASCQLFGQSEEKLRNHTAAQLINGFNFLRwlesePQDSHNehvviNG 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 268 LNHV-EVT------FESQHQFVDAVITLKPIVEeqgnsfilllhpveqmrqlMTSQLGKVS----HTFEQMSTDDPETRR 336
Cdd:PRK10820 155 QDFLmEITpvylqdENDQHVLVGAVVMLRSTAR-------------------MGRQLQNLAvnddSAFSQIVAVSPKMRQ 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 337 LIHFGRQAARGSFPILLCGEEGVGKELLSQAIHNESERASGPYIAVNCQLYANSVLGQDFMGSAPTDDEN---GRLSRLE 413
Cdd:PRK10820 216 VVEQARKLAMLDAPLLITGDTGTGKDLLAYACHLRSPRGKKPFLALNCASIPDDVVESELFGHAPGAYPNaleGKKGFFE 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 414 LANGGTLFLEKIEYLAPELQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQLYYALHSFEIVIP 493
Cdd:PRK10820 296 QANGGSVLLDEIGEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVRVICATQKNLVELVQKGEFREDLYYRLNVLTLNLP 375
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2131433501 494 PLRARRSSIPSLifTRLnsLKKRFSYSLKIDDDALAQ-----LVAYSWPGNDFEL-NSI 546
Cdd:PRK10820 376 PLRDRPQDIMPL--TEL--FVARFADEQGVPRPKLAAdlntvLTRYGWPGNVRQLkNAI 430
|
|
| pspF |
PRK11608 |
phage shock protein operon transcriptional activator; Provisional |
350-548 |
4.19e-28 |
|
phage shock protein operon transcriptional activator; Provisional
Pssm-ID: 236936 [Multi-domain] Cd Length: 326 Bit Score: 115.15 E-value: 4.19e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 350 PILLCGEEGVGKELLSQAIHNESERASGPYIAVNCQLYANSVLGQDFMG---SAPTDDENGRLSRLELANGGTLFLEKIE 426
Cdd:PRK11608 31 PVLIIGERGTGKELIASRLHYLSSRWQGPFISLNCAALNENLLDSELFGheaGAFTGAQKRHPGRFERADGGTLFLDELA 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 427 yLAPEL-QSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQLYYALhSFEIV-IPPLRARRSSIPS 504
Cdd:PRK11608 111 -TAPMLvQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMVAEGKFRADLLDRL-AFDVVqLPPLRERQSDIML 188
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 2131433501 505 L-------IFTRLN-SLKKRFSyslkidDDALAQLVAYSWPGNDFELNSIIE 548
Cdd:PRK11608 189 MaehfaiqMCRELGlPLFPGFT------ERARETLLNYRWPGNIRELKNVVE 234
|
|
| Sigma54_activ_2 |
pfam14532 |
Sigma-54 interaction domain; |
343-495 |
1.46e-18 |
|
Sigma-54 interaction domain;
Pssm-ID: 434021 [Multi-domain] Cd Length: 138 Bit Score: 82.39 E-value: 1.46e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 343 QAARGSFPILLCGEEGVGKELLSQAIHNESERASGPYIAVNCqlyansvlgqdfmGSAPtddengrLSRLELANGGTLFL 422
Cdd:pfam14532 16 QAAQSTLPVFLTGEPGSGKEFCARYLHNPSTPWVQPFDIEYL-------------AHAP-------LELLEQAKGGTLYL 75
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2131433501 423 EKIEYLAPELQSALLQVIkqgvltrldaRRLIPVDVKVIATTTVDLANLVEQNRFSRQLYYALHSFEIVIPPL 495
Cdd:pfam14532 76 KDIADLSKALQKGLLLLL----------AKAEGYRVRLVCTSSKDLPQLAAAGLFDEQLYFELSALRLHVPPL 138
|
|
| AAA |
cd00009 |
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily ... |
335-494 |
1.94e-18 |
|
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Pssm-ID: 99707 [Multi-domain] Cd Length: 151 Bit Score: 82.58 E-value: 1.94e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 335 RRLIHFGRQAARGS--FPILLCGEEGVGKELLSQAIHNESERASGPYIAVNCQLYANSVLGQDFMGSAPTDDENGrlsRL 412
Cdd:cd00009 4 EEAIEALREALELPppKNLLLYGPPGTGKTTLARAIANELFRPGAPFLYLNASDLLEGLVVAELFGHFLVRLLFE---LA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 413 ELANGGTLFLEKIEYLAPELQSALLQVIKQGVLTRLDarrliPVDVKVIATTTVDLANLVEQNRFSRqlyyalHSFEIVI 492
Cdd:cd00009 81 EKAKPGVLFIDEIDSLSRGAQNALLRVLETLNDLRID-----RENVRVIGATNRPLLGDLDRALYDR------LDIRIVI 149
|
..
gi 2131433501 493 PP 494
Cdd:cd00009 150 PL 151
|
|
| PAS |
pfam00989 |
PAS fold; The PAS fold corresponds to the structural domain that has previously been defined ... |
203-306 |
4.66e-13 |
|
PAS fold; The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs. The PAS fold appears in archaea, eubacteria and eukarya. This domain can bind gases (O2, CO and NO), FAD, 4-hydroxycinnamic acid and NAD+ (Matilla et.al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043).
Pssm-ID: 395786 [Multi-domain] Cd Length: 113 Bit Score: 65.90 E-value: 4.66e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 203 NQMYGLLESMDDGVMAWNEQGVLQFLNARAALLLHLDAQASQGKNIHDLLN------LPMLLRRAIKHARGLNHVEVTFE 276
Cdd:pfam00989 1 EDLRAILESLPDGIFVVDEDGRILYVNAAAEELLGLSREEVIGKSLLDLIPeeddaeVAELLRQALLQGEESRGFEVSFR 80
|
90 100 110
....*....|....*....|....*....|...
gi 2131433501 277 -SQHQFVDAVITLKPIVEEQGN--SFILLLHPV 306
Cdd:pfam00989 81 vPDGRPRHVEVRASPVRDAGGEilGFLGVLRDI 113
|
|
| PspF |
COG1221 |
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain ... |
350-568 |
6.19e-13 |
|
Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription, Signal transduction mechanisms];
Pssm-ID: 440834 [Multi-domain] Cd Length: 835 Bit Score: 72.06 E-value: 6.19e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 350 PILLCGEEGVGKELLSQAIHN---ESER--ASGPYIAVNCQLYANS---VLGQDF---MGS---APTDDEnGrLsrLELA 415
Cdd:COG1221 132 HTLILGPTGVGKSFFAELMYEyaiEIGVlpEDAPFVVFNCADYANNpqlLMSQLFgyvKGAftgADKDKE-G-L--IEKA 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 416 NGGTLFLEKIEYLAPELQSALLQVIKQGVLTRL-DARRLIPVDVKVIATTTVDL-ANLveqnrfsrqlyyaLHSF----- 488
Cdd:COG1221 208 DGGILFLDEVHRLPPEGQEMLFTFMDKGIYRRLgETEKTRKANVRIIFATTEDPeSSL-------------LKTFlrrip 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 489 -EIVIPPLRARrsSIP---SLI--FTRLNSlkKRFSYSLKIDDDALAQLVAYSWPGNDFELNSII---------ENIAIS 553
Cdd:COG1221 275 mVIKLPSLEER--SLEerlELIkhFFKEEA--KRLNKPIKVSKEVLKALLLYDCPGNIGQLKSDIqlacakaflNYITNK 350
|
250
....*....|....*
gi 2131433501 554 SDNGHIRLSNLPDYL 568
Cdd:COG1221 351 KEEIEITLSDLPENV 365
|
|
| NtrB |
COG3852 |
Signal transduction histidine kinase NtrB, nitrogen specific [Signal transduction mechanisms]; |
195-312 |
1.39e-10 |
|
Signal transduction histidine kinase NtrB, nitrogen specific [Signal transduction mechanisms];
Pssm-ID: 443061 [Multi-domain] Cd Length: 361 Bit Score: 63.33 E-value: 1.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 195 LAESNRHLNQmygLLESMDDGVMAWNEQGVLQFLNARAALLLHLDAQASQGKNIHDLL----NLPMLLRRAIKHARGLNH 270
Cdd:COG3852 2 LRESEELLRA---ILDSLPDAVIVLDADGRITYVNPAAERLLGLSAEELLGRPLAELFpedsPLRELLERALAEGQPVTE 78
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 2131433501 271 VEVTFES-QHQFVDAVITLKPIVEEQGN-SFILLLHPVEQMRQL 312
Cdd:COG3852 79 REVTLRRkDGEERPVDVSVSPLRDAEGEgGVLLVLRDITERKRL 122
|
|
| HTH_8 |
pfam02954 |
Bacterial regulatory protein, Fis family; |
591-627 |
7.46e-10 |
|
Bacterial regulatory protein, Fis family;
Pssm-ID: 427077 [Multi-domain] Cd Length: 40 Bit Score: 54.32 E-value: 7.46e-10
10 20 30
....*....|....*....|....*....|....*..
gi 2131433501 591 IEKEAIIHAARVTSGRVQEMSQLLNIGRTTLWRKMKQ 627
Cdd:pfam02954 4 VEKELIEAALERTGGNKSKAARLLGISRRTLYRKLKK 40
|
|
| AAA |
smart00382 |
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a ... |
350-483 |
1.02e-08 |
|
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Pssm-ID: 214640 [Multi-domain] Cd Length: 148 Bit Score: 54.69 E-value: 1.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 350 PILLCGEEGVGKELLSQAIHNESERASGPYIAVNCQLYANSVLGQDFMGSAPTDDENG--------RLSRLELANGGTLF 421
Cdd:smart00382 4 VILIVGPPGSGKTTLARALARELGPPGGGVIYIDGEDILEEVLDQLLLIIVGGKKASGsgelrlrlALALARKLKPDVLI 83
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2131433501 422 LEKIEYLAPELQSALLQVIkqgVLTRLDARRLIPVDVKVIATTT--VDLANLVEQNRFSRQLYY 483
Cdd:smart00382 84 LDEITSLLDAEQEALLLLL---EELRLLLLLKSEKNLTVILTTNdeKDLGPALLRRRFDRRIVL 144
|
|
| NtrY |
COG5000 |
Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism ... |
174-311 |
2.50e-05 |
|
Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms];
Pssm-ID: 444024 [Multi-domain] Cd Length: 422 Bit Score: 47.26 E-value: 2.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 174 DLSLTLAIAR--EVGnsLLTDSL------LAESNRHLNQMYGLLE----SMDDGVMAWNEQGVLQFLNARAALLLHLDAQ 241
Cdd:COG5000 51 DLSVRLPVTGddEIG--ELARAFnrmtdqLKEQREELEERRRYLEtileNLPAGVIVLDADGRITLANPAAERLLGIPLE 128
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 242 ASQGKNIHDLLNLPMLLRRAIKHARGLNHVEVTFESQHQFVDAVITlkpiVEEQGNSFILLLHPVEQMRQ 311
Cdd:COG5000 129 ELIGKPLEELLPELDLAELLREALERGWQEEIELTRDGRRTLLVRA----SPLRDDGYVIVFDDITELLR 194
|
|
| PAS |
smart00091 |
PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising ... |
208-269 |
3.39e-05 |
|
PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels.
Pssm-ID: 214512 Cd Length: 67 Bit Score: 42.00 E-value: 3.39e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2131433501 208 LLESMDDGVMAWNEQGVLQFLNARAALLLHLDAQASQGKNIHDLLNLPMLLRRAIKHARGLN 269
Cdd:smart00091 6 ILESLPDGIFVLDLDGRILYANPAAEELLGYSPEELIGKSLLELIHPEDRERVQEALQRLLS 67
|
|
| PAS |
COG2202 |
PAS domain [Signal transduction mechanisms]; |
140-303 |
8.71e-05 |
|
PAS domain [Signal transduction mechanisms];
Pssm-ID: 441804 [Multi-domain] Cd Length: 258 Bit Score: 44.63 E-value: 8.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 140 LHPWSFCSTPVFDNHGRLFGSIslcclvehecvsdlsltlAIAREVGNSLLTDSLLAESNRHLNQmygLLESMDDGVMAW 219
Cdd:COG2202 95 LFWVELSISPVRDEDGEITGFV------------------GIARDITERKRAEEALRESEERLRL---LVENAPDGIFVL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 220 NEQGVLQFLNARAALLLHLDAQASQGKNIHDLLNLPMLLRRAIKHARGLNHVEVTFESQHQFVD-----AVITLKPIVEE 294
Cdd:COG2202 154 DLDGRILYVNPAAEELLGYSPEELLGKSLLDLLHPEDRERLLELLRRLLEGGRESYELELRLKDgdgrwVWVEASAVPLR 233
|
....*....
gi 2131433501 295 QGNSFILLL 303
Cdd:COG2202 234 DGGEVIGVL 242
|
|
| PRK11360 |
PRK11360 |
two-component system sensor histidine kinase AtoS; |
193-315 |
1.66e-04 |
|
two-component system sensor histidine kinase AtoS;
Pssm-ID: 236901 [Multi-domain] Cd Length: 607 Bit Score: 44.57 E-value: 1.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 193 SLLAESnRHLNQMygLLESMDDGVMAWNEQGVLQFLNARAALLLHLDAQASQGKNIHDLL--NLPM--LLRRAIKHARGL 268
Cdd:PRK11360 255 QALRET-RSLNEL--ILESIADGVIAIDRQGKITTMNPAAEVITGLQRHELVGKPYSELFppNTPFasPLLDTLEHGTEH 331
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 2131433501 269 NHVEVTFESQHQFVDAVITLKPIVEEQGNSF--ILLLHPVEQMRQLMTS 315
Cdd:PRK11360 332 VDLEISFPGRDRTIELSVSTSLLHNTHGEMIgaLVIFSDLTERKRLQRR 380
|
|
| GAF |
pfam01590 |
GAF domain; This domain is present in cGMP-specific phosphodiesterases, adenylyl and guanylyl ... |
53-189 |
5.78e-04 |
|
GAF domain; This domain is present in cGMP-specific phosphodiesterases, adenylyl and guanylyl cyclases, phytochromes, FhlA and NifA. Adenylyl and guanylyl cyclases catalyze ATP and GTP to the second messengers cAMP and cGMP, respectively, these products up-regulating catalytic activity by binding to the regulatory GAF domain(s). The opposite hydrolysis reaction is catalyzed by phosphodiesterase. cGMP-dependent 3',5'-cyclic phosphodiesterase catalyzes the conversion of guanosine 3',5'-cyclic phosphate to guanosine 5'-phosphate. Here too, cGMP regulates catalytic activity by GAF-domain binding. Phytochromes are regulatory photoreceptors in plants and bacteria which exist in two thermally-stable states that are reversibly inter-convertible by light: the Pr state absorbs maximally in the red region of the spectrum, while the Pfr state absorbs maximally in the far-red region. This domain is also found in FhlA (formate hydrogen lyase transcriptional activator) and NifA, a transcriptional activator which is required for activation of most Nif operons which are directly involved in nitrogen fixation. NifA interacts with sigma-54. This domain can bind biliverdine and phycocyanobilin (Matilla et al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043).
Pssm-ID: 460259 [Multi-domain] Cd Length: 133 Bit Score: 40.54 E-value: 5.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 53 LLTIAQAALEDAWEFMDGRPCALLILDESACILSRCGDPQTVEQLAELGFRDGSYCAESiigscalslatmpGQP---TK 129
Cdd:pfam01590 2 LEEILQTILEELRELLGADRCALYLPDADGLEYLPPGARWLKAAGLEIPPGTGVTVLRT-------------GRPlvvPD 68
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2131433501 130 TSGDQHFKQAL------HPWSFCSTPVFDnHGRLFGSISLCCLVEHECVSDLSLTLAIAREVGNSL 189
Cdd:pfam01590 69 AAGDPRFLDPLlllrnfGIRSLLAVPIID-DGELLGVLVLHHPRPPFTEEELELLEVLADQVAIAL 133
|
|
| PAS |
cd00130 |
PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising ... |
212-303 |
1.75e-03 |
|
PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction.
Pssm-ID: 238075 [Multi-domain] Cd Length: 103 Bit Score: 38.38 E-value: 1.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 212 MDDGVMAWNEQGVLQFLNARAALLLHLDAQASQGKNIHDLLNLPMLLRRAIKHARGLNH-----VEVTFESQ-HQFVDAV 285
Cdd:cd00130 1 LPDGVIVLDLDGRILYANPAAEQLLGYSPEELIGKSLLDLIHPEDREELRERLENLLSGgepvtLEVRLRRKdGSVIWVL 80
|
90
....*....|....*...
gi 2131433501 286 ITLKPIVEEQGNSFILLL 303
Cdd:cd00130 81 VSLTPIRDEGGEVIGLLG 98
|
|
| AAA_5 |
pfam07728 |
AAA domain (dynein-related subfamily); This Pfam entry includes some of the AAA proteins not ... |
350-464 |
3.53e-03 |
|
AAA domain (dynein-related subfamily); This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.
Pssm-ID: 400191 [Multi-domain] Cd Length: 135 Bit Score: 38.04 E-value: 3.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 350 PILLCGEEGVGK----ELLSQAIHNeserasGPYIAVNCQLYANSvlgQDFMGSAPTDDENGRLSRLELA----NGGTLF 421
Cdd:pfam07728 1 GVLLVGPPGTGKtelaERLAAALSN------RPVFYVQLTRDTTE---EDLFGRRNIDPGGASWVDGPLVraarEGEIAV 71
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 2131433501 422 LEKIEYLAPELQSALLQVIKQGVLTRLDARRLIPV---DVKVIATT 464
Cdd:pfam07728 72 LDEINRANPDVLNSLLSLLDERRLLLPDGGELVKAapdGFRLIATM 117
|
|
| AAA_2 |
pfam07724 |
AAA domain (Cdc48 subfamily); This Pfam entry includes some of the AAA proteins not detected ... |
351-498 |
6.01e-03 |
|
AAA domain (Cdc48 subfamily); This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.
Pssm-ID: 400187 [Multi-domain] Cd Length: 168 Bit Score: 37.95 E-value: 6.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 351 ILLCGEEGVGKELLSQAIHNESERASGPYIAVNCQLY--ANSVLgqDFMGSAPTD---DENGRLSRLELANGGT-LFLEK 424
Cdd:pfam07724 6 FLFLGPTGVGKTELAKALAELLFGDERALIRIDMSEYmeEHSVS--RLIGAPPGYvgyEEGGQLTEAVRRKPYSiVLIDE 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 425 IEYLAPELQSALLQVIKQGVLTRLDARrliPVDVK---VIATTTVDLANLVEQNRFSRQLYYALHSFEIV-------IPP 494
Cdd:pfam07724 84 IEKAHPGVQNDLLQILEGGTLTDKQGR---TVDFKntlFIMTGNFGSEKISDASRLGDSPDYELLKEEVMdllkkgfIPE 160
|
....
gi 2131433501 495 LRAR 498
Cdd:pfam07724 161 FLGR 164
|
|
| AAA |
pfam00004 |
ATPase family associated with various cellular activities (AAA); AAA family proteins often ... |
351-482 |
6.48e-03 |
|
ATPase family associated with various cellular activities (AAA); AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes.
Pssm-ID: 459627 [Multi-domain] Cd Length: 130 Bit Score: 37.19 E-value: 6.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2131433501 351 ILLCGEEGVGKELLSQAIHNESERasgPYIAVNCqlyanSVLGQDFMGSAPtDDENGRLSRLELANGGTLFLEKIEYLAP 430
Cdd:pfam00004 1 LLLYGPPGTGKTTLAKAVAKELGA---PFIEISG-----SELVSKYVGESE-KRLRELFEAAKKLAPCVIFIDEIDALAG 71
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 2131433501 431 ELQSALLQVIKQGV---LTRLDARRLIPVDVKVIATTT----VDLANLveqNRFSRQLY 482
Cdd:pfam00004 72 SRGSGGDSESRRVVnqlLTELDGFTSSNSKVIVIAATNrpdkLDPALL---GRFDRIIE 127
|
|
| |
