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Conserved domains on  [gi|1736039564|gb|KAA0521907|]
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FlxA protein [Enterobacter ludwigii]

Protein Classification

FlxA-like family protein( domain architecture ID 10626012)

FlxA-like family protein similar to Escherichia coli FlxA, whose expression is dependent on the flagellum-specific sigma factor, FliA, but is dispensable for motility development

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FlxA pfam14282
FlxA-like protein; This family includes FlxA from E. coli. The expression of FlxA is regulated ...
 24-92 1.77e-03

FlxA-like protein; This family includes FlxA from E. coli. The expression of FlxA is regulated by the FliA sigma factor, a transcription factor specific for class 3 flagellar operons. However FlxA is not required for flagellar function or formation.


:

Pssm-ID: 433836 [Multi-domain]  Cd Length: 101  Bit Score: 35.08  E-value: 1.77e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736039564  24 NDIAAQISRITDKITKLTQQLKEVANGSG-SAEEKKKQQELIQVQIKVLQAQLAQLQRQQAEEAQKKQEQ 92
Cdd:pfam14282  13 SGSASQIASLQKQIKNLTKQLKELSNSDEmTKEEKKQQQQLIQAQIQQLQAQIAQLQSQQAQKAQESQQS 82
 
Name Accession Description Interval E-value
FlxA pfam14282
FlxA-like protein; This family includes FlxA from E. coli. The expression of FlxA is regulated ...
 24-92 1.77e-03

FlxA-like protein; This family includes FlxA from E. coli. The expression of FlxA is regulated by the FliA sigma factor, a transcription factor specific for class 3 flagellar operons. However FlxA is not required for flagellar function or formation.


Pssm-ID: 433836 [Multi-domain]  Cd Length: 101  Bit Score: 35.08  E-value: 1.77e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736039564  24 NDIAAQISRITDKITKLTQQLKEVANGSG-SAEEKKKQQELIQVQIKVLQAQLAQLQRQQAEEAQKKQEQ 92
Cdd:pfam14282  13 SGSASQIASLQKQIKNLTKQLKELSNSDEmTKEEKKQQQQLIQAQIQQLQAQIAQLQSQQAQKAQESQQS 82
 
Name Accession Description Interval E-value
FlxA pfam14282
FlxA-like protein; This family includes FlxA from E. coli. The expression of FlxA is regulated ...
 24-92 1.77e-03

FlxA-like protein; This family includes FlxA from E. coli. The expression of FlxA is regulated by the FliA sigma factor, a transcription factor specific for class 3 flagellar operons. However FlxA is not required for flagellar function or formation.


Pssm-ID: 433836 [Multi-domain]  Cd Length: 101  Bit Score: 35.08  E-value: 1.77e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736039564  24 NDIAAQISRITDKITKLTQQLKEVANGSG-SAEEKKKQQELIQVQIKVLQAQLAQLQRQQAEEAQKKQEQ 92
Cdd:pfam14282  13 SGSASQIASLQKQIKNLTKQLKELSNSDEmTKEEKKQQQQLIQAQIQQLQAQIAQLQSQQAQKAQESQQS 82
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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