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Conserved domains on  [gi|1763958157|gb|KAB5253953|]
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hypothetical protein GAB07_00865 [Bacteroides thetaiotaomicron]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF6633 super family cl48497
Family of unknown function (DUF6633); This family of proteins is functionally uncharacterized. ...
 47-123 6.14e-05

Family of unknown function (DUF6633); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 148 and 213 amino acids in length.


The actual alignment was detected with superfamily member pfam20338:

Pssm-ID: 466488  Cd Length: 105  Bit Score: 40.82  E-value: 6.14e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1763958157  47 AQLAETALSILSSYWYLNLAELCIFFSQLKNGSRGQFvWGSkINNQAIMVALVEFCKDRRREIEHRENELVRKKAET 123
Cdd:pfam20338   5 ARQKDLATLILAEYPFLKASEILLFFHRLKCGRYGRF-YGM-VDALFITSSLLQFMDERRKDIIRYKEEDSAAEAIA 79
 
Name Accession Description Interval E-value
DUF6633 pfam20338
Family of unknown function (DUF6633); This family of proteins is functionally uncharacterized. ...
 47-123 6.14e-05

Family of unknown function (DUF6633); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 148 and 213 amino acids in length.


Pssm-ID: 466488  Cd Length: 105  Bit Score: 40.82  E-value: 6.14e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1763958157  47 AQLAETALSILSSYWYLNLAELCIFFSQLKNGSRGQFvWGSkINNQAIMVALVEFCKDRRREIEHRENELVRKKAET 123
Cdd:pfam20338   5 ARQKDLATLILAEYPFLKASEILLFFHRLKCGRYGRF-YGM-VDALFITSSLLQFMDERRKDIIRYKEEDSAAEAIA 79
 
Name Accession Description Interval E-value
DUF6633 pfam20338
Family of unknown function (DUF6633); This family of proteins is functionally uncharacterized. ...
 47-123 6.14e-05

Family of unknown function (DUF6633); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 148 and 213 amino acids in length.


Pssm-ID: 466488  Cd Length: 105  Bit Score: 40.82  E-value: 6.14e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1763958157  47 AQLAETALSILSSYWYLNLAELCIFFSQLKNGSRGQFvWGSkINNQAIMVALVEFCKDRRREIEHRENELVRKKAET 123
Cdd:pfam20338   5 ARQKDLATLILAEYPFLKASEILLFFHRLKCGRYGRF-YGM-VDALFITSSLLQFMDERRKDIIRYKEEDSAAEAIA 79
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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