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Conserved domains on  [gi|1786739159|gb|KAF0117020|]
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hypothetical protein FD150_110 [Rhodobacteraceae bacterium]

Protein Classification

N,N-dimethylformamidase beta subunit family domain-containing protein( domain architecture ID 20801894)

N,N-dimethylformamidase beta subunit family domain-containing protein similar to Burkholderia sp. N-acetyl-(R)-beta-phenylalanine acylase that hydrolyzes the amide bond of N-acetyl-(R)-beta-phenylalanine to produce enantiopure (R)-beta-phenylalanine

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF6605 pfam20254
Domain of unknown function (DUF6605); This entry represents a bacterial domain of unknown ...
 60-505 1.22e-78

Domain of unknown function (DUF6605); This entry represents a bacterial domain of unknown function often found associated with bacterial Ig-like domains.


:

Pssm-ID: 466405  Cd Length: 370  Bit Score: 251.08  E-value: 1.22e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1786739159  60 RLTITRDGLTPQTVHVTM---IPTTFAPTPADCSVKGCGWPIAFQITIPPDWPTGVYVATLAI-DGHESMAIFVLKPARP 135
Cdd:pfam20254   1 TREVYRLGWYGGKGARLVwtsAPLTYGAIHFHTDLVDCNWTTSFTFTVPADWRSGVYAAKLTTaDGKQSYIPFVVRPPAR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1786739159 136 TAQLALILTTGTWCAYNDWGGSNHYqGLTGPSGAEFAAN---VSLHRPWAkgfVRWPDDAPRiphasplltrpryphmef 212
Cdd:pfam20254  81 RADLLVVLPTTTYQAYNNWGGYSLY-DHSDGSGVAYSSRarpVSFDRPYY---RHWAFGAPG------------------ 138

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1786739159 213 arangiskkyassgWAAFERPFVLWAEEQAITLDYVTQHDLHGNPHLLDAYPRAVIVGHDEYWTWEMRDHLDAWLDRGGE 292
Cdd:pfam20254 139 --------------YFFADLPFIRWLEREGYDVDYITDHDLHRGALLLGRYRAVLSGGHDEYWSLEMRDALEAARDAGGN 204

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1786739159 293 LARFGGN-FFWQTRLSPDLI----TQTCYKTRAE--AEDPLATTDRLTsyWDHPQARRPAVAsmgLTGSMgvyagwsrCA 365
Cdd:pfam20254 205 LAFLGGNgFYWRVRLEPDRPhvrrTMVCYKTWSPdpGEYPHALTGELL--WRDRGNPRPENS---LLGVG--------YA 271

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1786739159 366 AHGSGGFTLYRPDHWALQGTGLGYGDVLGAASnifGYEVDGIDYeirNGLPYaapdtglegDLTIVGLSPATTLAH--HT 443
Cdd:pfam20254 272 AQGFGPYVVTDPDHWLFAGTGLKNGDFGGGLL---GYEADRVDV---LGSPP---------GIVVLASSPHVDYGNpgGR 336

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1786739159 444 GRHDMDYfigtldaeevaktiygevtsetlglasrgngsmaeYRRGRGAVFNAGSCEWVAGL 505
Cdd:pfam20254 337 VRADMTY-----------------------------------YETGGGAVFSAGSIQWAGGL 363
 
Name Accession Description Interval E-value
DUF6605 pfam20254
Domain of unknown function (DUF6605); This entry represents a bacterial domain of unknown ...
 60-505 1.22e-78

Domain of unknown function (DUF6605); This entry represents a bacterial domain of unknown function often found associated with bacterial Ig-like domains.


Pssm-ID: 466405  Cd Length: 370  Bit Score: 251.08  E-value: 1.22e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1786739159  60 RLTITRDGLTPQTVHVTM---IPTTFAPTPADCSVKGCGWPIAFQITIPPDWPTGVYVATLAI-DGHESMAIFVLKPARP 135
Cdd:pfam20254   1 TREVYRLGWYGGKGARLVwtsAPLTYGAIHFHTDLVDCNWTTSFTFTVPADWRSGVYAAKLTTaDGKQSYIPFVVRPPAR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1786739159 136 TAQLALILTTGTWCAYNDWGGSNHYqGLTGPSGAEFAAN---VSLHRPWAkgfVRWPDDAPRiphasplltrpryphmef 212
Cdd:pfam20254  81 RADLLVVLPTTTYQAYNNWGGYSLY-DHSDGSGVAYSSRarpVSFDRPYY---RHWAFGAPG------------------ 138

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1786739159 213 arangiskkyassgWAAFERPFVLWAEEQAITLDYVTQHDLHGNPHLLDAYPRAVIVGHDEYWTWEMRDHLDAWLDRGGE 292
Cdd:pfam20254 139 --------------YFFADLPFIRWLEREGYDVDYITDHDLHRGALLLGRYRAVLSGGHDEYWSLEMRDALEAARDAGGN 204

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1786739159 293 LARFGGN-FFWQTRLSPDLI----TQTCYKTRAE--AEDPLATTDRLTsyWDHPQARRPAVAsmgLTGSMgvyagwsrCA 365
Cdd:pfam20254 205 LAFLGGNgFYWRVRLEPDRPhvrrTMVCYKTWSPdpGEYPHALTGELL--WRDRGNPRPENS---LLGVG--------YA 271

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1786739159 366 AHGSGGFTLYRPDHWALQGTGLGYGDVLGAASnifGYEVDGIDYeirNGLPYaapdtglegDLTIVGLSPATTLAH--HT 443
Cdd:pfam20254 272 AQGFGPYVVTDPDHWLFAGTGLKNGDFGGGLL---GYEADRVDV---LGSPP---------GIVVLASSPHVDYGNpgGR 336

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1786739159 444 GRHDMDYfigtldaeevaktiygevtsetlglasrgngsmaeYRRGRGAVFNAGSCEWVAGL 505
Cdd:pfam20254 337 VRADMTY-----------------------------------YETGGGAVFSAGSIQWAGGL 363
 
Name Accession Description Interval E-value
DUF6605 pfam20254
Domain of unknown function (DUF6605); This entry represents a bacterial domain of unknown ...
 60-505 1.22e-78

Domain of unknown function (DUF6605); This entry represents a bacterial domain of unknown function often found associated with bacterial Ig-like domains.


Pssm-ID: 466405  Cd Length: 370  Bit Score: 251.08  E-value: 1.22e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1786739159  60 RLTITRDGLTPQTVHVTM---IPTTFAPTPADCSVKGCGWPIAFQITIPPDWPTGVYVATLAI-DGHESMAIFVLKPARP 135
Cdd:pfam20254   1 TREVYRLGWYGGKGARLVwtsAPLTYGAIHFHTDLVDCNWTTSFTFTVPADWRSGVYAAKLTTaDGKQSYIPFVVRPPAR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1786739159 136 TAQLALILTTGTWCAYNDWGGSNHYqGLTGPSGAEFAAN---VSLHRPWAkgfVRWPDDAPRiphasplltrpryphmef 212
Cdd:pfam20254  81 RADLLVVLPTTTYQAYNNWGGYSLY-DHSDGSGVAYSSRarpVSFDRPYY---RHWAFGAPG------------------ 138

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1786739159 213 arangiskkyassgWAAFERPFVLWAEEQAITLDYVTQHDLHGNPHLLDAYPRAVIVGHDEYWTWEMRDHLDAWLDRGGE 292
Cdd:pfam20254 139 --------------YFFADLPFIRWLEREGYDVDYITDHDLHRGALLLGRYRAVLSGGHDEYWSLEMRDALEAARDAGGN 204

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1786739159 293 LARFGGN-FFWQTRLSPDLI----TQTCYKTRAE--AEDPLATTDRLTsyWDHPQARRPAVAsmgLTGSMgvyagwsrCA 365
Cdd:pfam20254 205 LAFLGGNgFYWRVRLEPDRPhvrrTMVCYKTWSPdpGEYPHALTGELL--WRDRGNPRPENS---LLGVG--------YA 271

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1786739159 366 AHGSGGFTLYRPDHWALQGTGLGYGDVLGAASnifGYEVDGIDYeirNGLPYaapdtglegDLTIVGLSPATTLAH--HT 443
Cdd:pfam20254 272 AQGFGPYVVTDPDHWLFAGTGLKNGDFGGGLL---GYEADRVDV---LGSPP---------GIVVLASSPHVDYGNpgGR 336

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1786739159 444 GRHDMDYfigtldaeevaktiygevtsetlglasrgngsmaeYRRGRGAVFNAGSCEWVAGL 505
Cdd:pfam20254 337 VRADMTY-----------------------------------YETGGGAVFSAGSIQWAGGL 363
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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