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Conserved domains on  [gi|808273193|gb|KKE18525|]
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hypothetical protein TI36_21925 [Salmonella enterica subsp. enterica serovar Typhimurium]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2737 super family cl12508
Protein of unknown function (DUF2737); This family of proteins has no known function.
 7-59 9.56e-24

Protein of unknown function (DUF2737); This family of proteins has no known function.


The actual alignment was detected with superfamily member pfam10930:

Pssm-ID: 402487  Cd Length: 53  Bit Score: 83.61  E-value: 9.56e-24
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 808273193   7 MRGLAYNPGILPAEMIIRQRVKPMPSREELLKRNSFPSVNQNKYLNAMFRSGK 59
Cdd:pfam10930  1 MRGLAYNPDILPAELIIRHKIKPMPTREELLQRNSFPSINENKYLNAILRKDK 53
 
Name Accession Description Interval E-value
DUF2737 pfam10930
Protein of unknown function (DUF2737); This family of proteins has no known function.
 7-59 9.56e-24

Protein of unknown function (DUF2737); This family of proteins has no known function.


Pssm-ID: 402487  Cd Length: 53  Bit Score: 83.61  E-value: 9.56e-24
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 808273193   7 MRGLAYNPGILPAEMIIRQRVKPMPSREELLKRNSFPSVNQNKYLNAMFRSGK 59
Cdd:pfam10930  1 MRGLAYNPDILPAELIIRHKIKPMPTREELLQRNSFPSINENKYLNAILRKDK 53
 
Name Accession Description Interval E-value
DUF2737 pfam10930
Protein of unknown function (DUF2737); This family of proteins has no known function.
 7-59 9.56e-24

Protein of unknown function (DUF2737); This family of proteins has no known function.


Pssm-ID: 402487  Cd Length: 53  Bit Score: 83.61  E-value: 9.56e-24
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 808273193   7 MRGLAYNPGILPAEMIIRQRVKPMPSREELLKRNSFPSVNQNKYLNAMFRSGK 59
Cdd:pfam10930  1 MRGLAYNPDILPAELIIRHKIKPMPTREELLQRNSFPSINENKYLNAILRKDK 53
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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