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Conserved domains on  [gi|818240043|gb|KKP27229|]
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hypothetical protein UR16_C0005G0016 [Candidatus Woesebacteria bacterium GW2011_GWB1_31_29]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1573 super family cl44563
Protein of unknown function (DUF1573); These hypothetical proteins, from bacteria such as ...
 51-164 1.98e-13

Protein of unknown function (DUF1573); These hypothetical proteins, from bacteria such as Rhodopirellula baltica, Bacteroides thetaiotaomicron, and Porphyromonas gingivalis, share a region of conserved sequence towards their N-termini.


The actual alignment was detected with superfamily member pfam07610:

Pssm-ID: 479786  Cd Length: 98  Bit Score: 62.54  E-value: 1.98e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818240043   51 TSTADLGVMGVNDTKEAEFTIKNIGNKPLQILNINSSCNCTfgkiiyknietnefgmhkqsgyVAD-----IAPGESAIV 125
Cdd:pfam07610   5 ETTIDFGTIEEGGPVTHTFTFTNTGKAPLVITDVRTSCGCT----------------------TPEwpkepIAPGETGKI 62

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 818240043  126 KAIYKPYIMPvyGNVSRDVYISTNDPENPKLIfTLTTVV 164
Cdd:pfam07610  63 KVTFDAKGRP--GHFNKTITVYSNASPGPVTL-TIKGNV 98
 
Name Accession Description Interval E-value
DUF1573 pfam07610
Protein of unknown function (DUF1573); These hypothetical proteins, from bacteria such as ...
 51-164 1.98e-13

Protein of unknown function (DUF1573); These hypothetical proteins, from bacteria such as Rhodopirellula baltica, Bacteroides thetaiotaomicron, and Porphyromonas gingivalis, share a region of conserved sequence towards their N-termini.


Pssm-ID: 429559  Cd Length: 98  Bit Score: 62.54  E-value: 1.98e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818240043   51 TSTADLGVMGVNDTKEAEFTIKNIGNKPLQILNINSSCNCTfgkiiyknietnefgmhkqsgyVAD-----IAPGESAIV 125
Cdd:pfam07610   5 ETTIDFGTIEEGGPVTHTFTFTNTGKAPLVITDVRTSCGCT----------------------TPEwpkepIAPGETGKI 62

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 818240043  126 KAIYKPYIMPvyGNVSRDVYISTNDPENPKLIfTLTTVV 164
Cdd:pfam07610  63 KVTFDAKGRP--GHFNKTITVYSNASPGPVTL-TIKGNV 98
 
Name Accession Description Interval E-value
DUF1573 pfam07610
Protein of unknown function (DUF1573); These hypothetical proteins, from bacteria such as ...
 51-164 1.98e-13

Protein of unknown function (DUF1573); These hypothetical proteins, from bacteria such as Rhodopirellula baltica, Bacteroides thetaiotaomicron, and Porphyromonas gingivalis, share a region of conserved sequence towards their N-termini.


Pssm-ID: 429559  Cd Length: 98  Bit Score: 62.54  E-value: 1.98e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818240043   51 TSTADLGVMGVNDTKEAEFTIKNIGNKPLQILNINSSCNCTfgkiiyknietnefgmhkqsgyVAD-----IAPGESAIV 125
Cdd:pfam07610   5 ETTIDFGTIEEGGPVTHTFTFTNTGKAPLVITDVRTSCGCT----------------------TPEwpkepIAPGETGKI 62

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 818240043  126 KAIYKPYIMPvyGNVSRDVYISTNDPENPKLIfTLTTVV 164
Cdd:pfam07610  63 KVTFDAKGRP--GHFNKTITVYSNASPGPVTL-TIKGNV 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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