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Conserved domains on  [gi|838649961|gb|KLW33876|]
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inner membrane protein YeiU [Enterobacter sp. MGH85]

Protein Classification

phosphatase PAP2 family protein( domain architecture ID 256)

type 2 phosphatidic acid phosphatase (PAP2) family protein may be a histidine phosphatase or a vanadium haloperoxidase, and is predicted to be a transmembrane protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PAP2_like super family cl00474
PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, ...
98-210 2.35e-13

PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies. Several members of this superfamily have been predicted to be transmembrane proteins.


The actual alignment was detected with superfamily member smart00014:

Pssm-ID: 469784 [Multi-domain]  Cd Length: 116  Bit Score: 64.29  E-value: 2.35e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838649961    98 MLLAAVIINQLAQHLMPVKRASPSlsFPNINRVSELLHIPTKDASKDSFPGDHGMMLLIFAGFMLRYFG-----KKAFAI 172
Cdd:smart00014   1 ALLAVVSQLFNGVIKNYFGRPRPF--FLSIGDACCTPNFLLTLEAGYSFPSGHTAFAFAFALFLLLYLParagrKLLIFL 78
                           90       100       110
                   ....*....|....*....|....*....|....*...
gi 838649961   173 ALVIVVVFAFPRVMIGAHWLTDIAVGSLTAVLIGLPWV 210
Cdd:smart00014  79 LLLLALVVGFSRVYLGAHWPSDVLAGSLLGILIAAVLF 116
 
Name Accession Description Interval E-value
acidPPc smart00014
Acid phosphatase homologues;
98-210 2.35e-13

Acid phosphatase homologues;


Pssm-ID: 214471 [Multi-domain]  Cd Length: 116  Bit Score: 64.29  E-value: 2.35e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838649961    98 MLLAAVIINQLAQHLMPVKRASPSlsFPNINRVSELLHIPTKDASKDSFPGDHGMMLLIFAGFMLRYFG-----KKAFAI 172
Cdd:smart00014   1 ALLAVVSQLFNGVIKNYFGRPRPF--FLSIGDACCTPNFLLTLEAGYSFPSGHTAFAFAFALFLLLYLParagrKLLIFL 78
                           90       100       110
                   ....*....|....*....|....*....|....*...
gi 838649961   173 ALVIVVVFAFPRVMIGAHWLTDIAVGSLTAVLIGLPWV 210
Cdd:smart00014  79 LLLLALVVGFSRVYLGAHWPSDVLAGSLLGILIAAVLF 116
PAP2_like cd01610
PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, ...
88-207 4.38e-09

PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies. Several members of this superfamily have been predicted to be transmembrane proteins.


Pssm-ID: 238813 [Multi-domain]  Cd Length: 122  Bit Score: 52.85  E-value: 4.38e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838649961  88 RRRILIIGLVMLLAAVIINQLAQHLMPVKRaspslsFPNINRVSELLHIPTKDASKDSFPGDHGMMLLIFAGFMLRYFGK 167
Cdd:cd01610    1 RRLLALLLLLALLAGLLLTGVLKYLFGRPR------PYFLLRCGPDGDPLLLTEGGYSFPSGHAAFAFALALFLALLLPR 74
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 838649961 168 K-----AFAIALVIVVVFAFPRVMIGAHWLTDIAVGSLTAVLIGL 207
Cdd:cd01610   75 RllrllLGLLLLLLALLVGLSRVYLGVHYPSDVLAGALLGILVAL 119
PAP2 pfam01569
PAP2 superfamily; This family includes the enzyme type 2 phosphatidic acid phosphatase (PAP2), ...
96-214 3.09e-06

PAP2 superfamily; This family includes the enzyme type 2 phosphatidic acid phosphatase (PAP2), Glucose-6-phosphatase EC:3.1.3.9, Phosphatidylglycerophosphatase B EC:3.1.3.27 and bacterial acid phosphatase EC:3.1.3.2. The family also includes a variety of haloperoxidases that function by oxidising halides in the presence of hydrogen peroxide to form the corresponding hypohalous acids.


Pssm-ID: 426329 [Multi-domain]  Cd Length: 124  Bit Score: 45.10  E-value: 3.09e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838649961   96 LVMLLAAVIINQLAQHLmpVKRASPSLSFPNINRVSellHIPTKDASKDSFPGDHGMMLLIFAGFMLRYFG-------KK 168
Cdd:pfam01569   3 LLALALAGLLSSVLKDY--FGRPRPFFLLLEGGLVP---APSTLPGLGYSFPSGHSATAFALALLLALLLRrlrkivrVL 77
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 838649961  169 AFAIALVIVVVFAFPRVMIGAHWLTDIAVGSLTAVLIGLPWVLMTP 214
Cdd:pfam01569  78 LALLLLVLALLVGLSRLYLGVHFPSDVLAGALIGILLALLVYRLVP 123
PgpB COG0671
Membrane-associated phospholipid phosphatase [Lipid transport and metabolism]; ...
30-207 5.71e-06

Membrane-associated phospholipid phosphatase [Lipid transport and metabolism]; Membrane-associated phospholipid phosphatase is part of the Pathway/BioSystem: Phospholipid biosynthesis


Pssm-ID: 440435 [Multi-domain]  Cd Length: 189  Bit Score: 45.42  E-value: 5.71e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838649961  30 FWFPLDSGLFHFFNQALAKSEAFLWLVAITNNRAFDGCSLLAMGCLMLSFWLKEDKTGRRRILIIGLVMLLAAVIINQLA 109
Cdd:COG0671    9 LLLLLLLLADLLALALLALLLLLALLLLLLLLLALLLILLLLLLLLLLLLLLLLLLLRLLALLLLLLLLAALLLLLLLLL 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838649961 110 QHLMP--VKRASPSlsfpninrVSELLHIPTKDASKDSFPGDHGMMLLIFAGFMLRYFGKKAFAIALVIVVVF-AFPRVM 186
Cdd:COG0671   89 LLLLKylFGRPRPF--------VVPDLELLLGTAGGYSFPSGHAAAAFALALVLALLLPRRWLAALLLALALLvGLSRVY 160
                        170       180
                 ....*....|....*....|.
gi 838649961 187 IGAHWLTDIAVGSLTAVLIGL 207
Cdd:COG0671  161 LGVHYPSDVLAGALLGLAIAL 181
PRK11837 PRK11837
undecaprenyl pyrophosphate phosphatase; Provisional
34-206 5.79e-04

undecaprenyl pyrophosphate phosphatase; Provisional


Pssm-ID: 183335  Cd Length: 202  Bit Score: 39.61  E-value: 5.79e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838649961  34 LDSGLFHFFNqalAKSEAFLWLVAITNNRAFDGCSLLAMGCLMLSFWLKEDKTGRRRILIIGLVM-LLAAVIINQLAQHL 112
Cdd:PRK11837   5 LNLSLFSLIN---ATPDSAPWMISLAIFIAKDLILIVPLLAVVLWLWGPRDQLTAQRQLVIKIAIaLAISLLVSWTIGHL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838649961 113 MPVKRaspslsfPNINRVSE--LLHIPTkdaskDSFPGDHGMMLLIFAGFMLRYFGKKAFAIALVIVVVFAFPRVMIGAH 190
Cdd:PRK11837  82 FPHDR-------PFVEGIGYnfLHHAAD-----DSFPSDHGTVIFTFALAFLFWHRLWSGSLLMAIAVAIAWSRVYLGVH 149
                        170
                 ....*....|....*.
gi 838649961 191 WLTDIaVGSLTAVLIG 206
Cdd:PRK11837 150 WPLDM-LGALLVGMIG 164
 
Name Accession Description Interval E-value
acidPPc smart00014
Acid phosphatase homologues;
98-210 2.35e-13

Acid phosphatase homologues;


Pssm-ID: 214471 [Multi-domain]  Cd Length: 116  Bit Score: 64.29  E-value: 2.35e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838649961    98 MLLAAVIINQLAQHLMPVKRASPSlsFPNINRVSELLHIPTKDASKDSFPGDHGMMLLIFAGFMLRYFG-----KKAFAI 172
Cdd:smart00014   1 ALLAVVSQLFNGVIKNYFGRPRPF--FLSIGDACCTPNFLLTLEAGYSFPSGHTAFAFAFALFLLLYLParagrKLLIFL 78
                           90       100       110
                   ....*....|....*....|....*....|....*...
gi 838649961   173 ALVIVVVFAFPRVMIGAHWLTDIAVGSLTAVLIGLPWV 210
Cdd:smart00014  79 LLLLALVVGFSRVYLGAHWPSDVLAGSLLGILIAAVLF 116
PAP2_like cd01610
PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, ...
88-207 4.38e-09

PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies. Several members of this superfamily have been predicted to be transmembrane proteins.


Pssm-ID: 238813 [Multi-domain]  Cd Length: 122  Bit Score: 52.85  E-value: 4.38e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838649961  88 RRRILIIGLVMLLAAVIINQLAQHLMPVKRaspslsFPNINRVSELLHIPTKDASKDSFPGDHGMMLLIFAGFMLRYFGK 167
Cdd:cd01610    1 RRLLALLLLLALLAGLLLTGVLKYLFGRPR------PYFLLRCGPDGDPLLLTEGGYSFPSGHAAFAFALALFLALLLPR 74
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 838649961 168 K-----AFAIALVIVVVFAFPRVMIGAHWLTDIAVGSLTAVLIGL 207
Cdd:cd01610   75 RllrllLGLLLLLLALLVGLSRVYLGVHYPSDVLAGALLGILVAL 119
PAP2_BcrC_like cd03385
PAP2_like proteins, BcrC_like subfamily. Several members of this family have been annotated as ...
75-207 1.42e-06

PAP2_like proteins, BcrC_like subfamily. Several members of this family have been annotated as bacitracin transport permeases, as it was suspected that they form the permease component of an ABC transporter system. It was shown, however, that BcrC from Bacillus subtilis posesses undecaprenyl pyrophosphate (UPP) phospatase activity, and it is hypothesized that it competes with bacitracin for UPP, increasing the cell's resistance to bacitracin.


Pssm-ID: 239480  Cd Length: 144  Bit Score: 46.48  E-value: 1.42e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838649961  75 LMLSFWLKEDKTGRRRILIIGLVmLLAAVIINQLAQHLMPVKRasPSLSFPNINRvseLLHIPTkdaskDSFPGDHGMML 154
Cdd:cd03385   19 LLVVLWLWGGEKQRKVVLFATIA-VAVALLINYIIGLLYFHPR--PFVVGLGHNL---LPHAAD-----SSFPSDHTTLF 87
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 838649961 155 LIFAgFMLRYFGKKAFAIALVIVVVF-AFPRVMIGAHWLTDIAVGSLTAVLIGL 207
Cdd:cd03385   88 FSIA-FSLLLRRRKWAGWILLILALLvAWSRIYLGVHYPLDMLGAALVAVLSAL 140
PAP2 pfam01569
PAP2 superfamily; This family includes the enzyme type 2 phosphatidic acid phosphatase (PAP2), ...
96-214 3.09e-06

PAP2 superfamily; This family includes the enzyme type 2 phosphatidic acid phosphatase (PAP2), Glucose-6-phosphatase EC:3.1.3.9, Phosphatidylglycerophosphatase B EC:3.1.3.27 and bacterial acid phosphatase EC:3.1.3.2. The family also includes a variety of haloperoxidases that function by oxidising halides in the presence of hydrogen peroxide to form the corresponding hypohalous acids.


Pssm-ID: 426329 [Multi-domain]  Cd Length: 124  Bit Score: 45.10  E-value: 3.09e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838649961   96 LVMLLAAVIINQLAQHLmpVKRASPSLSFPNINRVSellHIPTKDASKDSFPGDHGMMLLIFAGFMLRYFG-------KK 168
Cdd:pfam01569   3 LLALALAGLLSSVLKDY--FGRPRPFFLLLEGGLVP---APSTLPGLGYSFPSGHSATAFALALLLALLLRrlrkivrVL 77
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 838649961  169 AFAIALVIVVVFAFPRVMIGAHWLTDIAVGSLTAVLIGLPWVLMTP 214
Cdd:pfam01569  78 LALLLLVLALLVGLSRLYLGVHFPSDVLAGALIGILLALLVYRLVP 123
PAP2_like_3 cd03393
PAP2_like_3 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This ...
75-205 4.24e-06

PAP2_like_3 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria and archaea, lacks functional characterization and may act as a membrane-associated lipid phosphatase.


Pssm-ID: 239487 [Multi-domain]  Cd Length: 125  Bit Score: 44.67  E-value: 4.24e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838649961  75 LMLSFWLKEDKTGRRRIliiglVMLLAAVIINQLAQHLMPVKRASPSLSFPNINRVSellhiptkdASKDSFPGDHGMML 154
Cdd:cd03393    3 LSLIYWLVDKRLGRYLG-----LALCASGYLNAALKEVFKIPRPFTYDGIQAIYEES---------AGGYGFPSGHAQTS 68
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 838649961 155 LIFAGFMLRYFGKKAFA-IALVIVVVFAFPRVMIGAHWLTDIAVGSLTAVLI 205
Cdd:cd03393   69 ATFWGSLMLHVRKKWFTlIGVVLVVLISFSRLYLGVHWPSDVIGGVLIGLLV 120
PgpB COG0671
Membrane-associated phospholipid phosphatase [Lipid transport and metabolism]; ...
30-207 5.71e-06

Membrane-associated phospholipid phosphatase [Lipid transport and metabolism]; Membrane-associated phospholipid phosphatase is part of the Pathway/BioSystem: Phospholipid biosynthesis


Pssm-ID: 440435 [Multi-domain]  Cd Length: 189  Bit Score: 45.42  E-value: 5.71e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838649961  30 FWFPLDSGLFHFFNQALAKSEAFLWLVAITNNRAFDGCSLLAMGCLMLSFWLKEDKTGRRRILIIGLVMLLAAVIINQLA 109
Cdd:COG0671    9 LLLLLLLLADLLALALLALLLLLALLLLLLLLLALLLILLLLLLLLLLLLLLLLLLLRLLALLLLLLLLAALLLLLLLLL 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838649961 110 QHLMP--VKRASPSlsfpninrVSELLHIPTKDASKDSFPGDHGMMLLIFAGFMLRYFGKKAFAIALVIVVVF-AFPRVM 186
Cdd:COG0671   89 LLLLKylFGRPRPF--------VVPDLELLLGTAGGYSFPSGHAAAAFALALVLALLLPRRWLAALLLALALLvGLSRVY 160
                        170       180
                 ....*....|....*....|.
gi 838649961 187 IGAHWLTDIAVGSLTAVLIGL 207
Cdd:COG0671  161 LGVHYPSDVLAGALLGLAIAL 181
PAP2_like_5 cd03394
PAP2_like_5 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This ...
95-206 4.79e-05

PAP2_like_5 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.


Pssm-ID: 239488 [Multi-domain]  Cd Length: 106  Bit Score: 41.16  E-value: 4.79e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838649961  95 GLVMLLAAVIINQLAQHLMP--VKRASPSlsfpninrvsellhipTKDASKDSFPGDHGMMLLIFAGFM-LRYFGKKAFA 171
Cdd:cd03394    4 GLLILAEAAALTAAVTEGLKfaVGRARPD----------------GSNNGYRSFPSGHTASAFAAATFLqYRYGWRWYGI 67
                         90       100       110
                 ....*....|....*....|....*....|....*
gi 838649961 172 IALVIVVVFAFPRVMIGAHWLTDIAVGSLTAVLIG 206
Cdd:cd03394   68 PAYALASLVGASRVVANRHWLSDVLAGAAIGILVG 102
PAP2_like_2 cd03392
PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This ...
88-218 1.27e-04

PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.


Pssm-ID: 239486  Cd Length: 182  Bit Score: 41.44  E-value: 1.27e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838649961  88 RRRILIIGLVMLLAAVIINQLAQHLmpVKRASPSLsfpninrvsellhIPTKDASKDSFPGDH--------GMMLLIFAG 159
Cdd:cd03392   60 RRRAALFLLLALLGGGALNTLLKLL--VQRPRPPL-------------HLLVPEGGYSFPSGHamgatvlyGFLAYLLAR 124
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 838649961 160 FMLRYFGKKAFAIALVIVVVF-AFPRVMIGAHWLTDIavgsLTAVLIGLPWVLMTPLSDR 218
Cdd:cd03392  125 RLPRRRVRILLLILAAILILLvGLSRLYLGVHYPSDV----LAGWLLGLAWLALLILLYR 180
PRK11837 PRK11837
undecaprenyl pyrophosphate phosphatase; Provisional
34-206 5.79e-04

undecaprenyl pyrophosphate phosphatase; Provisional


Pssm-ID: 183335  Cd Length: 202  Bit Score: 39.61  E-value: 5.79e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838649961  34 LDSGLFHFFNqalAKSEAFLWLVAITNNRAFDGCSLLAMGCLMLSFWLKEDKTGRRRILIIGLVM-LLAAVIINQLAQHL 112
Cdd:PRK11837   5 LNLSLFSLIN---ATPDSAPWMISLAIFIAKDLILIVPLLAVVLWLWGPRDQLTAQRQLVIKIAIaLAISLLVSWTIGHL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838649961 113 MPVKRaspslsfPNINRVSE--LLHIPTkdaskDSFPGDHGMMLLIFAGFMLRYFGKKAFAIALVIVVVFAFPRVMIGAH 190
Cdd:PRK11837  82 FPHDR-------PFVEGIGYnfLHHAAD-----DSFPSDHGTVIFTFALAFLFWHRLWSGSLLMAIAVAIAWSRVYLGVH 149
                        170
                 ....*....|....*.
gi 838649961 191 WLTDIaVGSLTAVLIG 206
Cdd:PRK11837 150 WPLDM-LGALLVGMIG 164
PAP2_like_6 cd03396
PAP2_like_6 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This ...
145-207 5.92e-03

PAP2_like_6 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which mainly contains bacterial proteins, lacks functional characterization and may act as a membrane-associated lipid phosphatase.


Pssm-ID: 239490  Cd Length: 197  Bit Score: 36.51  E-value: 5.92e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 838649961 145 SFPGDHGMM--LLIFAGFMLR----YFGKKAFAIALVIVVVFAFPRVMIGAHWLTDIAVGSLTAVLIGL 207
Cdd:cd03396  123 SFPSGHASAgfALLALYFLFRrrrpRLARLVLAAGLALGALMGLARMARGAHFLSDVLWSLLLVWLIAL 191
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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