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Conserved domains on  [gi|911030776|gb|KNI06201|]
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hypothetical protein AEU00_00135 [Salmonella enterica subsp. enterica serovar Enteritidis]

Protein Classification

YhfG family protein( domain architecture ID 10013458)

YhfG family protein is a DUF2559 domain-containing protein; similar to Escherichia coli protein YhfG

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10204 PRK10204
hypothetical protein; Provisional
 1-55 4.10e-24

hypothetical protein; Provisional


:

Pssm-ID: 182304  Cd Length: 55  Bit Score: 84.19  E-value: 4.10e-24
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 911030776  1 MKKLTDKQKSRFWEQRRNVNFQQSRRLEGIEIPLVTLTADEALARLDELRRHYER 55
Cdd:PRK10204  1 MKKLTDKQKSRLWEQQRNRNFQASRRLEGVEMPLVTLTAEEALARLEELRRHYER 55
 
Name Accession Description Interval E-value
PRK10204 PRK10204
hypothetical protein; Provisional
 1-55 4.10e-24

hypothetical protein; Provisional


Pssm-ID: 182304  Cd Length: 55  Bit Score: 84.19  E-value: 4.10e-24
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 911030776  1 MKKLTDKQKSRFWEQRRNVNFQQSRRLEGIEIPLVTLTADEALARLDELRRHYER 55
Cdd:PRK10204  1 MKKLTDKQKSRLWEQQRNRNFQASRRLEGVEMPLVTLTAEEALARLEELRRHYER 55
DUF2559 pfam10832
Protein of unknown function (DUF2559); This family of proteins appear to be restricted to ...
 2-55 4.94e-19

Protein of unknown function (DUF2559); This family of proteins appear to be restricted to Enterobacteriaceae. The sequences are annotated as yhfG however currently no function is known.


Pssm-ID: 431516  Cd Length: 54  Bit Score: 71.61  E-value: 4.94e-19
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 911030776   2 KKLTDKQKSRFWEQRRNVNFQQSRRLEGIEIPLVTLTADEALARLDELRRHYER 55
Cdd:pfam10832  1 TKLTLKQKKRYFAKTRNANYQASLRLEGLDIPLVTLSAEQAAQRLEALRRHYER 54
 
Name Accession Description Interval E-value
PRK10204 PRK10204
hypothetical protein; Provisional
 1-55 4.10e-24

hypothetical protein; Provisional


Pssm-ID: 182304  Cd Length: 55  Bit Score: 84.19  E-value: 4.10e-24
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 911030776  1 MKKLTDKQKSRFWEQRRNVNFQQSRRLEGIEIPLVTLTADEALARLDELRRHYER 55
Cdd:PRK10204  1 MKKLTDKQKSRLWEQQRNRNFQASRRLEGVEMPLVTLTAEEALARLEELRRHYER 55
DUF2559 pfam10832
Protein of unknown function (DUF2559); This family of proteins appear to be restricted to ...
 2-55 4.94e-19

Protein of unknown function (DUF2559); This family of proteins appear to be restricted to Enterobacteriaceae. The sequences are annotated as yhfG however currently no function is known.


Pssm-ID: 431516  Cd Length: 54  Bit Score: 71.61  E-value: 4.94e-19
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 911030776   2 KKLTDKQKSRFWEQRRNVNFQQSRRLEGIEIPLVTLTADEALARLDELRRHYER 55
Cdd:pfam10832  1 TKLTLKQKKRYFAKTRNANYQASLRLEGLDIPLVTLSAEQAAQRLEALRRHYER 54
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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