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Conserved domains on  [gi|930309235|gb|KPH96707|]
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phosphatidylserine decarboxylase [Pseudoalteromonas porphyrae]

Protein Classification

phosphatidylserine decarboxylase( domain architecture ID 10011131)

phosphatidylserine decarboxylase catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)

EC:  4.1.1.65
Gene Ontology:  GO:0006646|GO:0004609
PubMed:  1495415|32402247|33707636
SCOP:  4007787

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
psd PRK00044
phosphatidylserine decarboxylase; Reviewed
 1-274 1.25e-178

phosphatidylserine decarboxylase; Reviewed


:

Pssm-ID: 234591  Cd Length: 288  Bit Score: 493.19  E-value: 1.25e-178
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235   1 MPKHFVSRMVGKLAAAKAGALTTTLIKLFIKQYKIDMNEAQYSDPAHYKTFNEFFTRPLKEGVRPLTTDDSIITHPVDGA 80
Cdd:PRK00044  13 LPKHLLTRLAGWLASSRAGWLTTAVIRLFIKKYKVDMSEAQKPDPAAYKTFNDFFTRALKDGARPIDEDPNALVSPADGA 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235  81 ISQLGAIVDGQLIQAKGHDYSLQALLGGSEQDTAPFLGGEFATIYLAPKDYHRIHMPIDGTLSKMIYVPGDLFSVNPLTA 160
Cdd:PRK00044  93 ISQLGPIEDGQIFQAKGHSYSLEALLGGDAALADPFRNGSFATIYLSPRDYHRVHMPCDGTLREMIYVPGDLFSVNPLTA 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235 161 QNVPNLFARNERVVAIFDTEIGPLAMVLVGATIVASIETIWAGTVTPPAGKDVFSWNYPTSGDNSITLKKGDEMGRFKLG 240
Cdd:PRK00044 173 RNVPNLFARNERVVCLFDTEFGPMAQVLVGATIVGSIETVWAGTVTPPREGIIKRWDYPEAGDGAITLKKGAEMGRFKLG 252

                        250       260       270
                 ....*....|....*....|....*....|....
gi 930309235 241 STVILAWGANKAGILDDQKPETVTRMGTPFAEIN 274
Cdd:PRK00044 253 STVINLFPPGKVQLAEQLQAGSVVRMGQPLAHIT 286
 
Name Accession Description Interval E-value
psd PRK00044
phosphatidylserine decarboxylase; Reviewed
 1-274 1.25e-178

phosphatidylserine decarboxylase; Reviewed


Pssm-ID: 234591  Cd Length: 288  Bit Score: 493.19  E-value: 1.25e-178
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235   1 MPKHFVSRMVGKLAAAKAGALTTTLIKLFIKQYKIDMNEAQYSDPAHYKTFNEFFTRPLKEGVRPLTTDDSIITHPVDGA 80
Cdd:PRK00044  13 LPKHLLTRLAGWLASSRAGWLTTAVIRLFIKKYKVDMSEAQKPDPAAYKTFNDFFTRALKDGARPIDEDPNALVSPADGA 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235  81 ISQLGAIVDGQLIQAKGHDYSLQALLGGSEQDTAPFLGGEFATIYLAPKDYHRIHMPIDGTLSKMIYVPGDLFSVNPLTA 160
Cdd:PRK00044  93 ISQLGPIEDGQIFQAKGHSYSLEALLGGDAALADPFRNGSFATIYLSPRDYHRVHMPCDGTLREMIYVPGDLFSVNPLTA 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235 161 QNVPNLFARNERVVAIFDTEIGPLAMVLVGATIVASIETIWAGTVTPPAGKDVFSWNYPTSGDNSITLKKGDEMGRFKLG 240
Cdd:PRK00044 173 RNVPNLFARNERVVCLFDTEFGPMAQVLVGATIVGSIETVWAGTVTPPREGIIKRWDYPEAGDGAITLKKGAEMGRFKLG 252

                        250       260       270
                 ....*....|....*....|....*....|....
gi 930309235 241 STVILAWGANKAGILDDQKPETVTRMGTPFAEIN 274
Cdd:PRK00044 253 STVINLFPPGKVQLAEQLQAGSVVRMGQPLAHIT 286
Psd COG0688
Phosphatidylserine decarboxylase [Lipid transport and metabolism]; Phosphatidylserine ...
 2-274 1.77e-103

Phosphatidylserine decarboxylase [Lipid transport and metabolism]; Phosphatidylserine decarboxylase is part of the Pathway/BioSystem: Phospholipid biosynthesis


Pssm-ID: 440452 [Multi-domain]  Cd Length: 243  Bit Score: 301.00  E-value: 1.77e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235   2 PKHFVSRMVGKLAAAKAGALTTtLIKLFIKQYKIDMNEAQysdPAHYKTFNEFFTRPLKEGVRPLTTDDSIITHPVDGAI 81
Cdd:COG0688    1 PKHLLSRLMGPIAREGWPFIAL-LIRTFIKRYGIDLSEAL---PSSYTSFNDFFFRDLKPGARPIPDDPDAVVSPADGKV 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235  82 SQLGAIVDGQLIQAKGHDYSLQALLGGSEqDTAPFLGGEFATIYLAPKDYHRIHMPIDGTLSKMIYVPGDLFSVNPLTAQ 161
Cdd:COG0688   77 SQIGEIEEDRLLQAKGHPYSLEELLGDSE-LAEKFEGGTFVSIFLSPFDYHRNHMPVDGTVVEVKYIPGKFLSVNPLALR 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235 162 nvPNLFARNERVVAIFDTEIGPLAMVLVGATIVASIETIWagtvtppagkdvfswnyptsgDNSITLKKGDEMGRFKLGS 241
Cdd:COG0688  156 --PKLFARNERVVIVIETEFGPVAVVQVGALIVRRIVTYV---------------------KEGDTLKKGEEMGLFKFGS 212

                        250       260       270
                 ....*....|....*....|....*....|...
gi 930309235 242 TVILAWGANKAGIldDQKPETVTRMGTPFAEIN 274
Cdd:COG0688  213 TVDLLLPKGAVEI--LVKPGQKVRAGETIGRLK 243
PS_decarb TIGR00163
phosphatidylserine decarboxylase precursor; Phosphatidylserine decarboxylase is synthesized as ...
 37-271 4.40e-97

phosphatidylserine decarboxylase precursor; Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein. A closely related family, possibly also active as phosphatidylserine decarboxylase, falls under model TIGR00164. [Fatty acid and phospholipid metabolism, Biosynthesis]


Pssm-ID: 272936 [Multi-domain]  Cd Length: 238  Bit Score: 284.80  E-value: 4.40e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235   37 MNEAQYSDPAHYKTFNEFFTRPLKEGVRPLTTDDSIITHPVDGAISQLGAIVDGQLIQAKGHDYSLQALLGGSEQDTAPF 116
Cdd:TIGR00163   1 LDEAEKPDLADYRSLNEFFIRPLKLERRPVDKEPNALVSPADGVISEVGIINPNQILQVKGMDYSLEELLGEKNPLSPYF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235  117 LGGE-FATIYLAPKDYHRIHMPIDGTLSKMIYVPGDLFSVNPLTAQNVPNLFARNERVVAIFDTEIGPLAMVLVGATIVA 195
Cdd:TIGR00163  81 RNGGfFVVTYLSPRDYHRFHSPCDCRLRKMRYFPGDLFSVNPLGLQNVPNLFVRNERVILVFDTEFGNMLMIPVGATNVG 160

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 930309235  196 SIETIWAGTVTP-PAGKDVFSWNYPtsGDNSITLKKGDEMGRFKLGSTVILAWGANKAGILDDQKPETVTRMGTPFA 271
Cdd:TIGR00163 161 SIRTNFDGNIQTnPRHEFTQTWTYN--ALGPVKLLKGEEMGYFELGSTVILLFEADAFQLSAHLAVGQEVKIGELLA 235
PS_Dcarbxylase pfam02666
Phosphatidylserine decarboxylase; This is a family of phosphatidylserine decarboxylases, EC:4. ...
 51-272 1.40e-74

Phosphatidylserine decarboxylase; This is a family of phosphatidylserine decarboxylases, EC:4.1.1.65. These enzymes catalyze the reaction: Phosphatidyl-L-serine <=> phosphatidylethanolamine + CO2. Phosphatidylserine decarboxylase plays a central role in the biosynthesis of aminophospholipids by converting phosphatidylserine to phosphatidylethanolamine.


Pssm-ID: 396989 [Multi-domain]  Cd Length: 198  Bit Score: 226.01  E-value: 1.40e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235   51 FNEFFTRPLKEGVRPLTTDDSIITHPVDGAISQLGAIVDGQLIQAKGHDYSLQALLGGSEQDtaPFLGGEFATIYLAPKD 130
Cdd:pfam02666   1 LNAFFTRFLRDPARPIPAGPGAVVSPADGKISEIGEIEDDSVIQVKGVTYSLRELLGDDKLD--KFKGGTFIVIYLSPFD 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235  131 YHRIHMPIDGTLSKMIYVPGDLFSVNPLTAQNVPNLFARNERVVAIFDTEIGPLAMVLVGATIVASIETiwagTVTPPag 210
Cdd:pfam02666  79 YHRNHAPVDGTVKEVRYIPGKLLPVNPAALKEIPNLFALNERVVLVIETTDGKVAVVQVGALNVGSIVL----TVKPG-- 152

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 930309235  211 kdvfswnyptsgdnsITLKKGDEMGRFKLGSTVILAWGANKAGILDDQKPETVtRMGTPFAE 272
Cdd:pfam02666 153 ---------------DEVKKGEELGYFKFGSTVVLLFPKGKFFEDLVEPGQKV-KAGETIGA 198
 
Name Accession Description Interval E-value
psd PRK00044
phosphatidylserine decarboxylase; Reviewed
 1-274 1.25e-178

phosphatidylserine decarboxylase; Reviewed


Pssm-ID: 234591  Cd Length: 288  Bit Score: 493.19  E-value: 1.25e-178
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235   1 MPKHFVSRMVGKLAAAKAGALTTTLIKLFIKQYKIDMNEAQYSDPAHYKTFNEFFTRPLKEGVRPLTTDDSIITHPVDGA 80
Cdd:PRK00044  13 LPKHLLTRLAGWLASSRAGWLTTAVIRLFIKKYKVDMSEAQKPDPAAYKTFNDFFTRALKDGARPIDEDPNALVSPADGA 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235  81 ISQLGAIVDGQLIQAKGHDYSLQALLGGSEQDTAPFLGGEFATIYLAPKDYHRIHMPIDGTLSKMIYVPGDLFSVNPLTA 160
Cdd:PRK00044  93 ISQLGPIEDGQIFQAKGHSYSLEALLGGDAALADPFRNGSFATIYLSPRDYHRVHMPCDGTLREMIYVPGDLFSVNPLTA 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235 161 QNVPNLFARNERVVAIFDTEIGPLAMVLVGATIVASIETIWAGTVTPPAGKDVFSWNYPTSGDNSITLKKGDEMGRFKLG 240
Cdd:PRK00044 173 RNVPNLFARNERVVCLFDTEFGPMAQVLVGATIVGSIETVWAGTVTPPREGIIKRWDYPEAGDGAITLKKGAEMGRFKLG 252

                        250       260       270
                 ....*....|....*....|....*....|....
gi 930309235 241 STVILAWGANKAGILDDQKPETVTRMGTPFAEIN 274
Cdd:PRK00044 253 STVINLFPPGKVQLAEQLQAGSVVRMGQPLAHIT 286
Psd COG0688
Phosphatidylserine decarboxylase [Lipid transport and metabolism]; Phosphatidylserine ...
 2-274 1.77e-103

Phosphatidylserine decarboxylase [Lipid transport and metabolism]; Phosphatidylserine decarboxylase is part of the Pathway/BioSystem: Phospholipid biosynthesis


Pssm-ID: 440452 [Multi-domain]  Cd Length: 243  Bit Score: 301.00  E-value: 1.77e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235   2 PKHFVSRMVGKLAAAKAGALTTtLIKLFIKQYKIDMNEAQysdPAHYKTFNEFFTRPLKEGVRPLTTDDSIITHPVDGAI 81
Cdd:COG0688    1 PKHLLSRLMGPIAREGWPFIAL-LIRTFIKRYGIDLSEAL---PSSYTSFNDFFFRDLKPGARPIPDDPDAVVSPADGKV 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235  82 SQLGAIVDGQLIQAKGHDYSLQALLGGSEqDTAPFLGGEFATIYLAPKDYHRIHMPIDGTLSKMIYVPGDLFSVNPLTAQ 161
Cdd:COG0688   77 SQIGEIEEDRLLQAKGHPYSLEELLGDSE-LAEKFEGGTFVSIFLSPFDYHRNHMPVDGTVVEVKYIPGKFLSVNPLALR 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235 162 nvPNLFARNERVVAIFDTEIGPLAMVLVGATIVASIETIWagtvtppagkdvfswnyptsgDNSITLKKGDEMGRFKLGS 241
Cdd:COG0688  156 --PKLFARNERVVIVIETEFGPVAVVQVGALIVRRIVTYV---------------------KEGDTLKKGEEMGLFKFGS 212

                        250       260       270
                 ....*....|....*....|....*....|...
gi 930309235 242 TVILAWGANKAGIldDQKPETVTRMGTPFAEIN 274
Cdd:COG0688  213 TVDLLLPKGAVEI--LVKPGQKVRAGETIGRLK 243
PS_decarb TIGR00163
phosphatidylserine decarboxylase precursor; Phosphatidylserine decarboxylase is synthesized as ...
 37-271 4.40e-97

phosphatidylserine decarboxylase precursor; Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein. A closely related family, possibly also active as phosphatidylserine decarboxylase, falls under model TIGR00164. [Fatty acid and phospholipid metabolism, Biosynthesis]


Pssm-ID: 272936 [Multi-domain]  Cd Length: 238  Bit Score: 284.80  E-value: 4.40e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235   37 MNEAQYSDPAHYKTFNEFFTRPLKEGVRPLTTDDSIITHPVDGAISQLGAIVDGQLIQAKGHDYSLQALLGGSEQDTAPF 116
Cdd:TIGR00163   1 LDEAEKPDLADYRSLNEFFIRPLKLERRPVDKEPNALVSPADGVISEVGIINPNQILQVKGMDYSLEELLGEKNPLSPYF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235  117 LGGE-FATIYLAPKDYHRIHMPIDGTLSKMIYVPGDLFSVNPLTAQNVPNLFARNERVVAIFDTEIGPLAMVLVGATIVA 195
Cdd:TIGR00163  81 RNGGfFVVTYLSPRDYHRFHSPCDCRLRKMRYFPGDLFSVNPLGLQNVPNLFVRNERVILVFDTEFGNMLMIPVGATNVG 160

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 930309235  196 SIETIWAGTVTP-PAGKDVFSWNYPtsGDNSITLKKGDEMGRFKLGSTVILAWGANKAGILDDQKPETVTRMGTPFA 271
Cdd:TIGR00163 161 SIRTNFDGNIQTnPRHEFTQTWTYN--ALGPVKLLKGEEMGYFELGSTVILLFEADAFQLSAHLAVGQEVKIGELLA 235
PRK09629 PRK09629
bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional
 1-271 2.02e-91

bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional


Pssm-ID: 104071 [Multi-domain]  Cd Length: 610  Bit Score: 282.39  E-value: 2.02e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235   1 MPKHFVSRMVGKLAAAKAGALTTTLIKLFIKQYKIDMNEAQYSDPAHYKTFNEFFTRPLKEGVRPLTTDDSIITHPVDGA 80
Cdd:PRK09629 336 LPHHLLSRLAGCVAECRVRWFKNAFTAWFARRYQVDMSQALVEDLTSYEHFNAFFTRALKADARPLDTTPGAILSPADGA 415

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235  81 ISQLGAIVDGQLIQAKGHDYSLQALLGGSEQDTAPFLGGEFATIYLAPKDYHRIHMPIDGTLSKMIYVPGDLFSVNPLTA 160
Cdd:PRK09629 416 ISQLGPIDHGRIFQAKGHSFSVLELLGGDPKLSAPFMGGEFATVYLSPKDYHRVHMPLAGTLREMVYVPGRIFSVNQTTA 495

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235 161 QNVPNLFARNERVVAIFDTEIGPLAMVLVGATIVASIETIWAGTVTPPAgKDVFSWNYPTSGDNSITLKKGDEMGRFKLG 240
Cdd:PRK09629 496 ENVPELFARNERVVCLFDTERGPMAVVLVGAMIVASVETVWAGLVTPPK-RELKTFSYDEAARAPIHLEKGAEMGRFKLG 574

                        250       260       270
                 ....*....|....*....|....*....|.
gi 930309235 241 STVILAWGANKAGILDDQKPETVTRMGTPFA 271
Cdd:PRK09629 575 STAIVLFGPNQVKWAEQLTAGSKVQMGQALA 605
PS_Dcarbxylase pfam02666
Phosphatidylserine decarboxylase; This is a family of phosphatidylserine decarboxylases, EC:4. ...
 51-272 1.40e-74

Phosphatidylserine decarboxylase; This is a family of phosphatidylserine decarboxylases, EC:4.1.1.65. These enzymes catalyze the reaction: Phosphatidyl-L-serine <=> phosphatidylethanolamine + CO2. Phosphatidylserine decarboxylase plays a central role in the biosynthesis of aminophospholipids by converting phosphatidylserine to phosphatidylethanolamine.


Pssm-ID: 396989 [Multi-domain]  Cd Length: 198  Bit Score: 226.01  E-value: 1.40e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235   51 FNEFFTRPLKEGVRPLTTDDSIITHPVDGAISQLGAIVDGQLIQAKGHDYSLQALLGGSEQDtaPFLGGEFATIYLAPKD 130
Cdd:pfam02666   1 LNAFFTRFLRDPARPIPAGPGAVVSPADGKISEIGEIEDDSVIQVKGVTYSLRELLGDDKLD--KFKGGTFIVIYLSPFD 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235  131 YHRIHMPIDGTLSKMIYVPGDLFSVNPLTAQNVPNLFARNERVVAIFDTEIGPLAMVLVGATIVASIETiwagTVTPPag 210
Cdd:pfam02666  79 YHRNHAPVDGTVKEVRYIPGKLLPVNPAALKEIPNLFALNERVVLVIETTDGKVAVVQVGALNVGSIVL----TVKPG-- 152

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 930309235  211 kdvfswnyptsgdnsITLKKGDEMGRFKLGSTVILAWGANKAGILDDQKPETVtRMGTPFAE 272
Cdd:pfam02666 153 ---------------DEVKKGEELGYFKFGSTVVLLFPKGKFFEDLVEPGQKV-KAGETIGA 198
PRK03934 PRK03934
phosphatidylserine decarboxylase; Provisional
 27-263 3.80e-57

phosphatidylserine decarboxylase; Provisional


Pssm-ID: 235177 [Multi-domain]  Cd Length: 265  Bit Score: 183.99  E-value: 3.80e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235  27 KLFIKQYKIDMNEaqYSDPAHYKTFNEFFTRPLKEGvRPLTTDDSIITHPVDGAISQLGAIVDGQLIQAKGHDYSLQALL 106
Cdd:PRK03934  29 ASYVKIFKIDMSE--FKPPENYKSLNALFTRSLKKP-REFDEDPNIFISPCDSLITECGSLEEDKALQIKGMEYSIEELL 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235 107 GGSEQDTAPflGGEFATIYLAPKDYHRIHMPIDGTLSKMIYVPGDLFSVNPLTAQNVPNLFARNERVVAIFDTEIGP-LA 185
Cdd:PRK03934 106 GESNSELVN--GFDYINFYLSPKDYHRYHAPCDLEILEARYIPGKLYPVNLPSLEKNKNLFVKNERVVLKCKDKKGKrLY 183

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 930309235 186 MVLVGATIVASIETIWAGTV-TPPAGKDVFSWNYptsgdNSITLKKGDEMGRFKLGSTVILAWGaNKAGILDDQKPETV 263
Cdd:PRK03934 184 FVFVGALNVGKMRFNFDERIqTNAKARFIQTYEY-----ENLKLKKGEELGNFEMGSTIVLFSQ-KGSLEFNLKAGKSV 256
PRK00723 PRK00723
phosphatidylserine decarboxylase; Provisional
 26-267 1.89e-53

phosphatidylserine decarboxylase; Provisional


Pssm-ID: 179097 [Multi-domain]  Cd Length: 297  Bit Score: 175.49  E-value: 1.89e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235  26 IKLFIKQYKIDMNEAQySDPAHYKTFNEFFTRPLKEGVRPLTTDDSIITHPVDGAISQLGAIVDGQLIQAKGHDYSLQAL 105
Cdd:PRK00723  62 IKPFVNDFNIDMSESE-KPLSDFKSFNDFFTRKLKPEARPIDQGENILISPGDGRLLAYENIDLNSLFQVKGKTYSLKEL 140

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235 106 LGgSEQDTAPFLGGEFATIYLAPKDYHRIHMPIDGTLSKMIYVPGDLFSVNPLTAQNVPNLFARNERVVAIFDTE-IGPL 184
Cdd:PRK00723 141 LG-DPELAKKYAGGTCLILRLCPTDYHRFHFPDSGICEETRKIKGHYYSVNPIALKKIFELFCENKREWSIFKSEnFGDI 219

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235 185 AMVLVGATIVASIETiwagTVTPpaGKDVfswnyptsgdnsitlKKGDEMGRFKL-GSTVILAWGANKAGILDD------ 257
Cdd:PRK00723 220 LYVEVGATCVGSIIQ----TYKP--NKKV---------------KKGDEKGYFKFgGSTVILFFEKNKIKIDADileqsk 278

                        250
                 ....*....|
gi 930309235 258 QKPETVTRMG 267
Cdd:PRK00723 279 LGYETKVLMG 288
PRK03140 PRK03140
phosphatidylserine decarboxylase; Provisional
 25-245 1.84e-48

phosphatidylserine decarboxylase; Provisional


Pssm-ID: 179544 [Multi-domain]  Cd Length: 259  Bit Score: 161.31  E-value: 1.84e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235  25 LIKLFIKQYKIDMNEAQySDPAHYKTFNEFFTRPLKEGVRPLTTDDSIITHPVDGAISQLGAIVDGQLIQAKGHDYSLQA 104
Cdd:PRK03140  34 LIPSYAKVYQINQDEME-KGLKEYRTLHELFTRKLKEGKRPIDTDASSIVSPVDGVFADVGPIEDDKTFDVKGKRYSIAE 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235 105 LLGGSEQDtAPFLGGEFATIYLAPKDYHRIHMPIDGTLSKMIYVPGDLFSVNPLTAQNVPNLFARNERVVAIFDTEIGPL 184
Cdd:PRK03140 113 MLGNEERA-QRYAGGTYMVLYLSPSHYHRIHSPISGTVTEQFVLGRKSYPVNALGLEYGKRPLSKNYRSVTEVNSDGEHM 191

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 930309235 185 AMVLVGATIVASIEtiwagtvtppagkdvfswnyPTSgdNSITLKKGDEMGRFKLGSTVIL 245
Cdd:PRK03140 192 ALVKVGAMFVNSIE--------------------LTH--ERDTVQKGEEMAYFSFGSTVVL 230
PLN02964 PLN02964
phosphatidylserine decarboxylase
 26-267 1.32e-38

phosphatidylserine decarboxylase


Pssm-ID: 215520 [Multi-domain]  Cd Length: 644  Bit Score: 142.69  E-value: 1.32e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235  26 IKLFIKQYK--IDMNEAQYSdPAHYKTFNEFFTRPLKEGVRPLT--TDDSIITHPVDGAISQLGAIVDGQLIQAKGHDYS 101
Cdd:PLN02964 390 IPKFLEFFKdqINMDEVKYP-LEHFKTFNEFFIRELKPGARPIAcmDNDDVAVCAADCRLMAFQSVDDSTRFWIKGRKFS 468

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235 102 LQALLGGSEQDTApFLGGEFATIYLAPKDYHRIHMPIDGTLSKMIYVPGDLFSVNPLtAQNVP--NLFARNERVVAIFDT 179
Cdd:PLN02964 469 IKGLLGKKVHSDA-FLDGSLVIFRLAPQDYHRFHVPVSGVIEKFVDVPGSLYTVNPI-AVNSKycNVFTENKRAVCIIST 546

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235 180 -EIGPLAMVLVGATIVASIetiwagTVTPPAGKDVfswnyptsgdnsitlKKGDEMGRFKLG-STVILAWGANKAGILDD 257
Cdd:PLN02964 547 aEFGKVAFVAIGATMVGSI------TFVKKEGDHV---------------KKGDELGYFSFGgSTVICVFEKDAIDIDED 605

                        250
                 ....*....|....*.
gi 930309235 258 ------QKPETVTRMG 267
Cdd:PLN02964 606 llanseRSLETLVSVG 621
PLN02938 PLN02938
phosphatidylserine decarboxylase
 48-249 7.77e-36

phosphatidylserine decarboxylase


Pssm-ID: 178526  Cd Length: 428  Bit Score: 132.64  E-value: 7.77e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235  48 YKTFNEFFTRPLKEGVRPLTTDDSIITHPVDGAISQLGAIV-DGQLI-QAKGHDYSLQALLGGSEQ-------------- 111
Cdd:PLN02938 141 YASLREFFVRSLKEGARPIDPDPNCLVSPVDGIVLRFGELKgPGTMIeQVKGFSYSVSALLGANSLlpmtaegkeekeee 220

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235 112 ------------------------DTAPFLGGEFATIYLAPKDYHRIHMPIDGTLSKMIYVPGDLFSVNPLTAQNVPNLF 167
Cdd:PLN02938 221 tlkdksskswlrvslaspklrdpvSASPMKGLFYCVIYLGPGDYHRIHSPSDWNIEVRRHFSGRLFPVNERATRTIRNLY 300

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235 168 ARNERVVAIFDTEIGPLAMVLVGATIVASIE-TIWAGTVTPPAGKDVFSWNYPTSGDNS-----ITLKKGDEMGRFKLGS 241
Cdd:PLN02938 301 VENERVVLEGEWQEGFMAMAAVGATNIGSIElFIEPELRTNRPKKKIFNSEPPEERVYEpegcgLCLKKGDEVAVFNLGS 380


                 ....*...
gi 930309235 242 TVILAWGA 249
Cdd:PLN02938 381 TVVLVFEA 388
PTZ00403 PTZ00403
phosphatidylserine decarboxylase; Provisional
 29-267 2.27e-22

phosphatidylserine decarboxylase; Provisional


Pssm-ID: 173594  Cd Length: 353  Bit Score: 94.53  E-value: 2.27e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235  29 FIKQYKIDMNEAQYSDPAhYKTFNEFFTRPLKEGVRPL--TTDDSIIThPVDGAISQLGAIVDGQLIQAKGHDYSLQALL 106
Cdd:PTZ00403  89 LIKYMGINKEEIKYPIES-YKSIGDFFSRYIREETRPIgdVSDYSIVS-PCDSELTDYGELSSEYLENVKGVKFNVNTFL 166

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235 107 GGSEQ-----DTAPFLggeFATIYLAPKDYHRIHMPIDGTLSKMIYVPGDLFSVNPLTAQNVPNLFARNERVVAIFDTEI 181
Cdd:PTZ00403 167 GSDMQkkyndGSTKFF---YAIFYLSPKKYHHFHAPFNFKYKIRRHISGELFPVFQGMFKIINNLFNINERVILSGEWKG 243

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 930309235 182 GPLAMVLVGATIVASIETIWAG--------TVTPPAGKDVFSWNYPTSGDNSItlkkGDEMGRFKLGSTVILAWgANKAG 253
Cdd:PTZ00403 244 GNVYYAAISAYNVGNIKIINDEelvtnnlrTQLSYMGGDINTKIYDSYKSVEV----GDEVGEFRMGSSIVVIF-ENKKN 318

                        250
                 ....*....|....
gi 930309235 254 ILDDQKPETVTRMG 267
Cdd:PTZ00403 319 FSWNVKPNQTVSVG 332
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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