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Conserved domains on  [gi|940049066|gb|KPW72502|]
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Uncharacterized protein ALO78_03800 [Pseudomonas amygdali pv. ciccaronei]

Protein Classification

DUF1145 domain-containing protein( domain architecture ID 10007976)

DUF1145 domain-containing protein similar to Escherichia coli YhhL

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YhhL COG3776
Uncharacterized conserved protein YhhL, DUF1145 family [Function unknown];
3-91 5.04e-24

Uncharacterized conserved protein YhhL, DUF1145 family [Function unknown];


:

Pssm-ID: 442990  Cd Length: 91  Bit Score: 86.51  E-value: 5.04e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940049066  3 VFWGLGKILMLGFWLVVLANAVIEAPSPFGVMIDMAGAVLFLTHLLELILFNGSL--RGRRHPWRDRGKIILFGIFHVQS 80
Cdd:COG3776   1 MLINLGRLLMLFVWGFLLLNLVHPFPKPLNIFLNVALGFMVLMHGLQLLLLKGTLpkDGPKLSKWDQLRIFLFGVFELLA 80

                        90
                ....*....|.
gi 940049066 81 IGRSTTGHSHA 91
Cdd:COG3776  81 WQKKLKAQQKA 91
 
Name Accession Description Interval E-value
YhhL COG3776
Uncharacterized conserved protein YhhL, DUF1145 family [Function unknown];
3-91 5.04e-24

Uncharacterized conserved protein YhhL, DUF1145 family [Function unknown];


Pssm-ID: 442990  Cd Length: 91  Bit Score: 86.51  E-value: 5.04e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940049066  3 VFWGLGKILMLGFWLVVLANAVIEAPSPFGVMIDMAGAVLFLTHLLELILFNGSL--RGRRHPWRDRGKIILFGIFHVQS 80
Cdd:COG3776   1 MLINLGRLLMLFVWGFLLLNLVHPFPKPLNIFLNVALGFMVLMHGLQLLLLKGTLpkDGPKLSKWDQLRIFLFGVFELLA 80

                        90
                ....*....|.
gi 940049066 81 IGRSTTGHSHA 91
Cdd:COG3776  81 WQKKLKAQQKA 91
DUF1145 pfam06611
Protein of unknown function (DUF1145); This family consists of several hypothetical bacterial ...
 3-60 1.88e-13

Protein of unknown function (DUF1145); This family consists of several hypothetical bacterial proteins of unknown function.


Pssm-ID: 429030  Cd Length: 58  Bit Score: 58.79  E-value: 1.88e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 940049066   3 VFWGLGKILMLGFWLVVLANAVIEAPSPFGVMIDMAGAVLFLTHLLELILFNGSLRGR 60
Cdd:pfam06611  1 MLINLGKLLMLGFWGVLLFNLVHPFPGPLNIFLNIAGGFLVLMHGLQLLLFKAALKKR 58
PRK10910 PRK10910
DUF1145 family protein;
7-76 3.19e-03

DUF1145 family protein;


Pssm-ID: 182831  Cd Length: 89  Bit Score: 33.44  E-value: 3.19e-03
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 940049066  7 LGKILMLGFWLVVLANAVIEAPSPFGVMIDMAGAVLFLTHLLELILFNGSLrGRRHPWRDRG---KIILFGIF 76
Cdd:PRK10910  5 LGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFMVLMHGLQLALLKSTQ-PKDGPQLSGLeqvRIFLFGVF 76
 
Name Accession Description Interval E-value
YhhL COG3776
Uncharacterized conserved protein YhhL, DUF1145 family [Function unknown];
3-91 5.04e-24

Uncharacterized conserved protein YhhL, DUF1145 family [Function unknown];


Pssm-ID: 442990  Cd Length: 91  Bit Score: 86.51  E-value: 5.04e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940049066  3 VFWGLGKILMLGFWLVVLANAVIEAPSPFGVMIDMAGAVLFLTHLLELILFNGSL--RGRRHPWRDRGKIILFGIFHVQS 80
Cdd:COG3776   1 MLINLGRLLMLFVWGFLLLNLVHPFPKPLNIFLNVALGFMVLMHGLQLLLLKGTLpkDGPKLSKWDQLRIFLFGVFELLA 80

                        90
                ....*....|.
gi 940049066 81 IGRSTTGHSHA 91
Cdd:COG3776  81 WQKKLKAQQKA 91
DUF1145 pfam06611
Protein of unknown function (DUF1145); This family consists of several hypothetical bacterial ...
 3-60 1.88e-13

Protein of unknown function (DUF1145); This family consists of several hypothetical bacterial proteins of unknown function.


Pssm-ID: 429030  Cd Length: 58  Bit Score: 58.79  E-value: 1.88e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 940049066   3 VFWGLGKILMLGFWLVVLANAVIEAPSPFGVMIDMAGAVLFLTHLLELILFNGSLRGR 60
Cdd:pfam06611  1 MLINLGKLLMLGFWGVLLFNLVHPFPGPLNIFLNIAGGFLVLMHGLQLLLFKAALKKR 58
PRK10910 PRK10910
DUF1145 family protein;
7-76 3.19e-03

DUF1145 family protein;


Pssm-ID: 182831  Cd Length: 89  Bit Score: 33.44  E-value: 3.19e-03
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 940049066  7 LGKILMLGFWLVVLANAVIEAPSPFGVMIDMAGAVLFLTHLLELILFNGSLrGRRHPWRDRG---KIILFGIF 76
Cdd:PRK10910  5 LGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFMVLMHGLQLALLKSTQ-PKDGPQLSGLeqvRIFLFGVF 76
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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