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Conserved domains on  [gi|967014587|gb|KTG97789|]
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hypothetical protein ASV37_01180 [Enterobacter hormaechei subsp. steigerwaltii]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3828 super family cl21673
Protein of unknown function (DUF3828); This is a family of bacterial proteins of unknown ...
 32-136 7.71e-05

Protein of unknown function (DUF3828); This is a family of bacterial proteins of unknown function.


The actual alignment was detected with superfamily member pfam12883:

Pssm-ID: 419781  Cd Length: 122  Bit Score: 39.70  E-value: 7.71e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 967014587   32 FNQWYIaqLDQNKPPVLNPDIMNEYVASGTIAAIKEMYSGESNDKDMPDADMFIKAQDWDDDWN---QITVLHSDFDAVC 108
Cdd:pfam12883   9 FYTQYM--LTFTETPKQDAAAMRPYISKELLQQLGSAFIDQLPEQEILDYDPFSYAQDYDPDWIpsvKVGPAKADLGGAV 86

                          90       100
                  ....*....|....*....|....*...
gi 967014587  109 TNVYVAFGKKQDHVIADCLVEEQGKWKV 136
Cdd:pfam12883  87 VDVWLGKQDGEPIQLTVYLKRENGKWKI 114
 
Name Accession Description Interval E-value
DUF3828 pfam12883
Protein of unknown function (DUF3828); This is a family of bacterial proteins of unknown ...
 32-136 7.71e-05

Protein of unknown function (DUF3828); This is a family of bacterial proteins of unknown function.


Pssm-ID: 403935  Cd Length: 122  Bit Score: 39.70  E-value: 7.71e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 967014587   32 FNQWYIaqLDQNKPPVLNPDIMNEYVASGTIAAIKEMYSGESNDKDMPDADMFIKAQDWDDDWN---QITVLHSDFDAVC 108
Cdd:pfam12883   9 FYTQYM--LTFTETPKQDAAAMRPYISKELLQQLGSAFIDQLPEQEILDYDPFSYAQDYDPDWIpsvKVGPAKADLGGAV 86

                          90       100
                  ....*....|....*....|....*...
gi 967014587  109 TNVYVAFGKKQDHVIADCLVEEQGKWKV 136
Cdd:pfam12883  87 VDVWLGKQDGEPIQLTVYLKRENGKWKI 114
 
Name Accession Description Interval E-value
DUF3828 pfam12883
Protein of unknown function (DUF3828); This is a family of bacterial proteins of unknown ...
 32-136 7.71e-05

Protein of unknown function (DUF3828); This is a family of bacterial proteins of unknown function.


Pssm-ID: 403935  Cd Length: 122  Bit Score: 39.70  E-value: 7.71e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 967014587   32 FNQWYIaqLDQNKPPVLNPDIMNEYVASGTIAAIKEMYSGESNDKDMPDADMFIKAQDWDDDWN---QITVLHSDFDAVC 108
Cdd:pfam12883   9 FYTQYM--LTFTETPKQDAAAMRPYISKELLQQLGSAFIDQLPEQEILDYDPFSYAQDYDPDWIpsvKVGPAKADLGGAV 86

                          90       100
                  ....*....|....*....|....*...
gi 967014587  109 TNVYVAFGKKQDHVIADCLVEEQGKWKV 136
Cdd:pfam12883  87 VDVWLGKQDGEPIQLTVYLKRENGKWKI 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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