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Conserved domains on  [gi|978904458|gb|KVR93350|]
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hypothetical protein WK28_16280 [Burkholderia vietnamiensis]

Protein Classification

DUF2939 domain-containing protein( domain architecture ID 10567659)

DUF2939 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2939 pfam11159
Protein of unknown function (DUF2939); This bacterial family of proteins has no known function.
 23-114 1.65e-32

Protein of unknown function (DUF2939); This bacterial family of proteins has no known function.


:

Pssm-ID: 431690  Cd Length: 92  Bit Score: 113.48  E-value: 1.65e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 978904458   23 VLAAIGYAYASPYVALGRLKSAIDARDAQAVSEYVDFPSLRISLKQQVTEELMRRIDAVKKNNPFAVLGALIGSALIGPL 102
Cdd:pfam11159   1 LLAALGAYAASPYLALYQLRQAARERDAAALSELVDFPALRASLKAQLNARLLRAAAPDLADDPLGALGAAFAARLVDAL 80

                          90
                  ....*....|..
gi 978904458  103 VDAYATPEGVAA 114
Cdd:pfam11159  81 VDALVTPEGLAA 92
 
Name Accession Description Interval E-value
DUF2939 pfam11159
Protein of unknown function (DUF2939); This bacterial family of proteins has no known function.
 23-114 1.65e-32

Protein of unknown function (DUF2939); This bacterial family of proteins has no known function.


Pssm-ID: 431690  Cd Length: 92  Bit Score: 113.48  E-value: 1.65e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 978904458   23 VLAAIGYAYASPYVALGRLKSAIDARDAQAVSEYVDFPSLRISLKQQVTEELMRRIDAVKKNNPFAVLGALIGSALIGPL 102
Cdd:pfam11159   1 LLAALGAYAASPYLALYQLRQAARERDAAALSELVDFPALRASLKAQLNARLLRAAAPDLADDPLGALGAAFAARLVDAL 80

                          90
                  ....*....|..
gi 978904458  103 VDAYATPEGVAA 114
Cdd:pfam11159  81 VDALVTPEGLAA 92
 
Name Accession Description Interval E-value
DUF2939 pfam11159
Protein of unknown function (DUF2939); This bacterial family of proteins has no known function.
 23-114 1.65e-32

Protein of unknown function (DUF2939); This bacterial family of proteins has no known function.


Pssm-ID: 431690  Cd Length: 92  Bit Score: 113.48  E-value: 1.65e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 978904458   23 VLAAIGYAYASPYVALGRLKSAIDARDAQAVSEYVDFPSLRISLKQQVTEELMRRIDAVKKNNPFAVLGALIGSALIGPL 102
Cdd:pfam11159   1 LLAALGAYAASPYLALYQLRQAARERDAAALSELVDFPALRASLKAQLNARLLRAAAPDLADDPLGALGAAFAARLVDAL 80

                          90
                  ....*....|..
gi 978904458  103 VDAYATPEGVAA 114
Cdd:pfam11159  81 VDALVTPEGLAA 92
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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