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Conserved domains on  [gi|1000279891|gb|KXK41812|]
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Cna B domain-containing protein [Bacteroidetes bacterium OLB11]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MSCRAMM_SdrD super family cl37929
MSCRAMM family adhesin SdrD; Features of this protein family include a YSIRK-type signal ...
 1169-1730 4.94e-95

MSCRAMM family adhesin SdrD; Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.


The actual alignment was detected with superfamily member NF012181:

Pssm-ID: 467951 [Multi-domain]  Cd Length: 1379  Bit Score: 339.09  E-value: 4.94e-95
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1169 LGDFVWYDHNNNGIQDANENGVPGVTVTLYDDMNNI-LATTATDARGFYLFDNLAAGNYRVGFSNIPNGYVFTKVNEGsd 1247
Cdd:NF012181   572 IGNYVWEDTNKNGVQELGEVGVKGVTVVVYDNKTNKeVGRTITDEKGGYLIPNLPNGDYRVEFSNLPQGYEVTPSKQG-- 649

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1248 ltDSDANQATGLTGVITLgSGEVNLTVDAGIKESiglfgTATLGDRVWDDVNNNGIQDENEIGVSGVTVTLYAADGvTVI 1327
Cdd:NF012181   650 --NNEELDSNGVSSVITV-NGKDNLSADLGIYKP-----KYNLGDYVWEDTNKNGIQDQDEKGISGVTVTLKDENG-NVL 720

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1328 ATQITDPLGNYLFTGLNEGSYVVGFSNlPAGYTFSDANQGADDTKDGDVDATTGgktgiigLREGEDNLTIDAGIHQAAG 1407
Cdd:NF012181   721 KTVTTDADGKYKFTDLDNGNYKVEFTT-PEGYTPTTVTSGSDIEKDSNGLTTTG-------VINGADNMTLDSGFYKTPK 792

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1408 LaSLGNFVWFDLNQDGIQDEGEPGVPGVSVTLYSSAGTKLATTTTNAAGLYQFTGLTPGSYYVEFTNlPAGYEFTFKGAG 1487
Cdd:NF012181   793 Y-NLGNYVWEDTNKDGKQDSTEKGISGVTVTLKNENGEVLQTTKTDKDGKYQFTGLENGTYKVEFET-PSGYTPTQVGSG 870

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1488 GDSALDSDADPNTGetewvtLVSGQNYPDLDAGIFTERAGLGNFVWNDLDGDGIQDAGENGIPGVTVILyASDGITPISS 1567
Cdd:NF012181   871 TDEGIDSNGTSTTG------VIKDKDNDTIDSGFYKPTYNLGDYVWEDTNKNGVQDKDEKGISGVTVTL-KDENDKVLKT 943

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1568 AITDANGFYTFINLEPGTYAVGFSNiPEGAIFSSRHQGANSALDSDPDPITGktqlvtLVSGEYNPTIDAGVYIPQGAGL 1647
Cdd:NF012181   944 VTTDENGKYQFTDLNNGTYKVEFET-PSGYTPTSVTSGNDTEKDSNGLTTTG------VIKDADNMTLDSGFYKTPKYSL 1016

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1648 GDYVWFDANNDGVQDANESGVPGVTVTLYNGNGIAIKSAVTDGRGYYSFPNLTPGTYSVGFSTlPANMAFTSSNVGNDSL 1727
Cdd:NF012181  1017 GDYVWYDSNKDGKQDSTEKGIKDVKVTLLNEKGEVIGTTKTDENGKYRFDNLDSGKYKVIFEK-PAGLTQTGTNTTEDDK 1095


                   ...
gi 1000279891 1728 DND 1730
Cdd:NF012181  1096 DAD 1098
SdrD_B pfam17210
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This ...
 927-1038 2.36e-49

SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.


:

Pssm-ID: 435789 [Multi-domain]  Cd Length: 112  Bit Score: 170.86  E-value: 2.36e-49
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  927 ASLGDYVWNDLNKDGIQDANELGISGVTVTLYDVNGLPVATTVTDATGHYLFDKLTPGTYSVGFSQPIGYVFSPKNQGGN 1006
Cdd:pfam17210    1 ASIGDFVWEDANKNGIQDAGEPGISGVTVTLYDANGTVVGTTTTDANGKYLFTNLAPGTYYVEFTAPAGYTFTPQNQGSD 80

                           90       100       110
                   ....*....|....*....|....*....|..
gi 1000279891 1007 NATDSDVDPITGMTSPVTIVAGENNLTIDAGL 1038
Cdd:pfam17210   81 DALDSDADPATGLTATVTLASGESDLTIDAGL 112
SdrD_B pfam17210
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This ...
 808-919 5.24e-42

SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.


:

Pssm-ID: 435789 [Multi-domain]  Cd Length: 112  Bit Score: 150.06  E-value: 5.24e-42
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  808 AQLGNYVWLDENKNGIQDANEVGVAGITVSLYDNSNNLISATVTDAYGKYLFNKLAPGNYHVGFTLPTNYVFTSKDQGGN 887
Cdd:pfam17210    1 ASIGDFVWEDANKNGIQDAGEPGISGVTVTLYDANGTVVGTTTTDANGKYLFTNLAPGTYYVEFTAPAGYTFTPQNQGSD 80

                           90       100       110
                   ....*....|....*....|....*....|..
gi 1000279891  888 DELDSDPDPVTGMTGNYVLAISDSNMTVDAGI 919
Cdd:pfam17210   81 DALDSDADPATGLTATVTLASGESDLTIDAGL 112
SdrD_B pfam17210
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This ...
 1046-1159 2.29e-39

SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.


:

Pssm-ID: 435789 [Multi-domain]  Cd Length: 112  Bit Score: 142.35  E-value: 2.29e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1046 ASLGNFVWNDVNNNGIQDANEVGVPGVTVTLYANDGiTVVSTTTTNEFGYYIFNNLTPDSYIVGFSgLPTGFSFVSNNQG 1125
Cdd:pfam17210    1 ASIGDFVWEDANKNGIQDAGEPGISGVTVTLYDANG-TVVGTTTTDANGKYLFTNLAPGTYYVEFT-APAGYTFTPQNQG 78

                           90       100       110
                   ....*....|....*....|....*....|....
gi 1000279891 1126 GDDELDSNPDPVTGKSAVVTLKPGDKNMSVDAGI 1159
Cdd:pfam17210   79 SDDALDSDADPATGLTATVTLASGESDLTIDAGL 112
Por_Secre_tail super family cl46851
Secretion system C-terminal sorting domain; Species that include Porphyromonas gingivalis, ...
 1881-1953 8.34e-06

Secretion system C-terminal sorting domain; Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber have on average twenty or more copies of this C-terminal domain, associated with sorting to the outer membrane and covalent modification. This domain targets proteins to type IX secretion systems and is secreted then cleaved off by a C-terminal signal peptidease. Based on similarity to other families it is likely that this domain adopts an immunoglobulin like fold.


The actual alignment was detected with superfamily member pfam18962:

Pssm-ID: 481191 [Multi-domain]  Cd Length: 75  Bit Score: 45.29  E-value: 8.34e-06
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1000279891 1881 IYPSPFQDDLTISYNASENSELSIEITDFSGKVVSRKSadvTIGQNNILINNLGNLAKGIYNIKVTDINTTQV 1953
Cdd:pfam18962    1 IYPNPAKDVLNISLKNSNSSNLNISIYDILGKLVKSNS---KTNGNNTKTIDVSNLSSGIYFVKINSGNGSTT 70
 
Name Accession Description Interval E-value
MSCRAMM_SdrD NF012181
MSCRAMM family adhesin SdrD; Features of this protein family include a YSIRK-type signal ...
 1169-1730 4.94e-95

MSCRAMM family adhesin SdrD; Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.


Pssm-ID: 467951 [Multi-domain]  Cd Length: 1379  Bit Score: 339.09  E-value: 4.94e-95
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1169 LGDFVWYDHNNNGIQDANENGVPGVTVTLYDDMNNI-LATTATDARGFYLFDNLAAGNYRVGFSNIPNGYVFTKVNEGsd 1247
Cdd:NF012181   572 IGNYVWEDTNKNGVQELGEVGVKGVTVVVYDNKTNKeVGRTITDEKGGYLIPNLPNGDYRVEFSNLPQGYEVTPSKQG-- 649

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1248 ltDSDANQATGLTGVITLgSGEVNLTVDAGIKESiglfgTATLGDRVWDDVNNNGIQDENEIGVSGVTVTLYAADGvTVI 1327
Cdd:NF012181   650 --NNEELDSNGVSSVITV-NGKDNLSADLGIYKP-----KYNLGDYVWEDTNKNGIQDQDEKGISGVTVTLKDENG-NVL 720

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1328 ATQITDPLGNYLFTGLNEGSYVVGFSNlPAGYTFSDANQGADDTKDGDVDATTGgktgiigLREGEDNLTIDAGIHQAAG 1407
Cdd:NF012181   721 KTVTTDADGKYKFTDLDNGNYKVEFTT-PEGYTPTTVTSGSDIEKDSNGLTTTG-------VINGADNMTLDSGFYKTPK 792

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1408 LaSLGNFVWFDLNQDGIQDEGEPGVPGVSVTLYSSAGTKLATTTTNAAGLYQFTGLTPGSYYVEFTNlPAGYEFTFKGAG 1487
Cdd:NF012181   793 Y-NLGNYVWEDTNKDGKQDSTEKGISGVTVTLKNENGEVLQTTKTDKDGKYQFTGLENGTYKVEFET-PSGYTPTQVGSG 870

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1488 GDSALDSDADPNTGetewvtLVSGQNYPDLDAGIFTERAGLGNFVWNDLDGDGIQDAGENGIPGVTVILyASDGITPISS 1567
Cdd:NF012181   871 TDEGIDSNGTSTTG------VIKDKDNDTIDSGFYKPTYNLGDYVWEDTNKNGVQDKDEKGISGVTVTL-KDENDKVLKT 943

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1568 AITDANGFYTFINLEPGTYAVGFSNiPEGAIFSSRHQGANSALDSDPDPITGktqlvtLVSGEYNPTIDAGVYIPQGAGL 1647
Cdd:NF012181   944 VTTDENGKYQFTDLNNGTYKVEFET-PSGYTPTSVTSGNDTEKDSNGLTTTG------VIKDADNMTLDSGFYKTPKYSL 1016

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1648 GDYVWFDANNDGVQDANESGVPGVTVTLYNGNGIAIKSAVTDGRGYYSFPNLTPGTYSVGFSTlPANMAFTSSNVGNDSL 1727
Cdd:NF012181  1017 GDYVWYDSNKDGKQDSTEKGIKDVKVTLLNEKGEVIGTTKTDENGKYRFDNLDSGKYKVIFEK-PAGLTQTGTNTTEDDK 1095


                   ...
gi 1000279891 1728 DND 1730
Cdd:NF012181  1096 DAD 1098
SdrD_B pfam17210
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This ...
 927-1038 2.36e-49

SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.


Pssm-ID: 435789 [Multi-domain]  Cd Length: 112  Bit Score: 170.86  E-value: 2.36e-49
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  927 ASLGDYVWNDLNKDGIQDANELGISGVTVTLYDVNGLPVATTVTDATGHYLFDKLTPGTYSVGFSQPIGYVFSPKNQGGN 1006
Cdd:pfam17210    1 ASIGDFVWEDANKNGIQDAGEPGISGVTVTLYDANGTVVGTTTTDANGKYLFTNLAPGTYYVEFTAPAGYTFTPQNQGSD 80

                           90       100       110
                   ....*....|....*....|....*....|..
gi 1000279891 1007 NATDSDVDPITGMTSPVTIVAGENNLTIDAGL 1038
Cdd:pfam17210   81 DALDSDADPATGLTATVTLASGESDLTIDAGL 112
SdrD_B pfam17210
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This ...
 1409-1521 5.65e-44

SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.


Pssm-ID: 435789 [Multi-domain]  Cd Length: 112  Bit Score: 155.45  E-value: 5.65e-44
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1409 ASLGNFVWFDLNQDGIQDEGEPGVPGVSVTLYSSAGTKLATTTTNAAGLYQFTGLTPGSYYVEFTNlPAGYEFTFKGAGG 1488
Cdd:pfam17210    1 ASIGDFVWEDANKNGIQDAGEPGISGVTVTLYDANGTVVGTTTTDANGKYLFTNLAPGTYYVEFTA-PAGYTFTPQNQGS 79

                           90       100       110
                   ....*....|....*....|....*....|...
gi 1000279891 1489 DSALDSDADPNTGETEWVTLVSGQNYPDLDAGI 1521
Cdd:pfam17210   80 DDALDSDADPATGLTATVTLASGESDLTIDAGL 112
SdrD_B pfam17210
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This ...
 808-919 5.24e-42

SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.


Pssm-ID: 435789 [Multi-domain]  Cd Length: 112  Bit Score: 150.06  E-value: 5.24e-42
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  808 AQLGNYVWLDENKNGIQDANEVGVAGITVSLYDNSNNLISATVTDAYGKYLFNKLAPGNYHVGFTLPTNYVFTSKDQGGN 887
Cdd:pfam17210    1 ASIGDFVWEDANKNGIQDAGEPGISGVTVTLYDANGTVVGTTTTDANGKYLFTNLAPGTYYVEFTAPAGYTFTPQNQGSD 80

                           90       100       110
                   ....*....|....*....|....*....|..
gi 1000279891  888 DELDSDPDPVTGMTGNYVLAISDSNMTVDAGI 919
Cdd:pfam17210   81 DALDSDADPATGLTATVTLASGESDLTIDAGL 112
SdrD_B pfam17210
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This ...
 1046-1159 2.29e-39

SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.


Pssm-ID: 435789 [Multi-domain]  Cd Length: 112  Bit Score: 142.35  E-value: 2.29e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1046 ASLGNFVWNDVNNNGIQDANEVGVPGVTVTLYANDGiTVVSTTTTNEFGYYIFNNLTPDSYIVGFSgLPTGFSFVSNNQG 1125
Cdd:pfam17210    1 ASIGDFVWEDANKNGIQDAGEPGISGVTVTLYDANG-TVVGTTTTDANGKYLFTNLAPGTYYVEFT-APAGYTFTPQNQG 78

                           90       100       110
                   ....*....|....*....|....*....|....
gi 1000279891 1126 GDDELDSNPDPVTGKSAVVTLKPGDKNMSVDAGI 1159
Cdd:pfam17210   79 SDDALDSDADPATGLTATVTLASGESDLTIDAGL 112
ClfA COG4932
Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing ...
 1012-1753 1.42e-24

Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443959 [Multi-domain]  Cd Length: 689  Bit Score: 111.60  E-value: 1.42e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1012 DVDPITGMTSPVTIVAGENNLTIDAGLYLQNANTASLGNFVWNDVNNNGIQDANEVGVPGVTVTLYANDGITVVSTTTTN 1091
Cdd:COG4932      1 SVGAKGAGTGVGTVIVEGAGSGSLVAVTTGAVLGLALGSTGGTAGSAAAINSAPATGTATGTSAGATAVIVIAAGLTATP 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1092 EFGYYIFNNLTPDSYIVGFSGLPTGFSFVSNNQGGDDELDSNPDPVTGKSAVVTLKPGDKNMSVDAGIHNPTLPIGALGD 1171
Cdd:COG4932     81 TETASGLGGDATVTTTANVAKVTNGAAANLTVNADGTASNAGTLAKGAETATGNLDGDAGDVTVTAAATDGVNDVDGNGA 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1172 FVWYDHNNNGIQDANEN-GVPGVTVTLYDDMNNILATTATDARGFYLFDNLAAGNYRVGFSNIPNGYVFtkvnegsdltd 1250
Cdd:COG4932    161 SVTDSVTLKKVDDGDTGkPLPGATFTLYDSDGTLVKTVTTDADGKYTFTDLPPGTYTLTETKAPEGYVL----------- 229

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1251 sDANQATGLTGVITLGSGEVNLTVDAGIKesigLFGTATLGDRVWDDVNNNGIqdeneigvSGVTVTLYAADGVTVIATQ 1330
Cdd:COG4932    230 -DTKDPTGATITVTVNAGGTVTVTLKNTP----KYTKGSVTVTKTDADTGEPL--------AGATFTLTDADGNTVVTTT 296

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1331 I--TDPLGNYLFTGLNEGSYVVGFSNLPAGYTfsdanqgaddtKDGDVDATTGGKtgiiglrEGEDNLTIDAGIhqaaGL 1408
Cdd:COG4932    297 VtvTDADGSYTFTDLPPGTYTVTETKAPAGYD-----------LDGEAVKVTITA-------GQTTTVTVTNGN----NE 354

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1409 ASLGNFVWFDLNQDGiqdeGEPGVPGVSVTLYSSAGTKLATTTTNAAGLYQFTGLTPGSYYVEFTNLPAGYE-----FTF 1483
Cdd:COG4932    355 VKTGSVTLTKVDADD----GEAPLAGAEFTLTDADGTVVATITTDADGTASFKGLAPGTYTLTETKAPEGYTldstpITV 430

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1484 K-GAGGDSALDSDADPNTGETEWVTLVSgqnyPDLDAGIFTERAGLGNFVWNDLDGDgiqdagengIPGVTVILYASDGI 1562
Cdd:COG4932    431 TvTDGGTGAIDTITNERKKGSVQVTKVD----APLAGATFTLTDADGTVVTLTTDAD---------LAGATFEADGKVVT 497

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1563 TpissaiTDANGFYTFINLEPGTY--AVGFSNIPEGAIFSSRHQGANSALDSDPDPITGKTQLVTLVSGEYNPTIDAGVY 1640
Cdd:COG4932    498 T------TDASGKYTFKNLPPGTYtdAGGSATVITDDTDGTVGDEATGTDPEVTVTGKSTTTTPDVALLTNLGTTEDALT 571

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1641 IPQGAGLGDYVWFDANNDGVQDANESGVPGVTVTLYNGNGIAIKSAV--TDGRGYYSFPNLTPGTYSVGFSTLPANMAFT 1718
Cdd:COG4932    572 SLAKTGDEVGKGLTLTTTTTVDTLDTNATEKTETVTVTAQLIGVKTTklTDTTDPKGGTVEEATTTGGTANTGKTGTDLT 651

                          730       740       750
                   ....*....|....*....|....*....|....*
gi 1000279891 1719 SSNVGNDSLDNDVVTIVNNPNGNGLPVSGKTLPIT 1753
Cdd:COG4932    652 DDTTVTSTTNTATSVEDTTDVDNKDAFTGGTEPGG 686
YfaS COG2373
Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function ...
 950-1096 6.71e-06

Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only];


Pssm-ID: 441940 [Multi-domain]  Cd Length: 1605  Bit Score: 51.62  E-value: 6.71e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  950 ISGVTVTLYDVNGLPVATTVTDATGHYLFDKLTPGTYS-------VGFSQPIGYVfSPKNQGGNNATDSDVDpitGMTSP 1022
Cdd:COG2373    291 VAGAEVELYDRNGQVLATATTDADGLARFPAGDRGEGGrapallvARKGGDFAFL-DLDDGPALDLSDFDVG---GRAPP 366

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1023 VTIVA-----------GEnnlTIDAGLYLQNANTASLGnfvwndvnnngiqdanevGVPgVTVTLYANDGITVVSTT-TT 1090
Cdd:COG2373    367 GGLDAflftdrgiyrpGE---TVHLKALLRDADGKAPA------------------GLP-LTLELTDPDGKEVRRQTlTL 424


                   ....*.
gi 1000279891 1091 NEFGYY 1096
Cdd:COG2373    425 NEFGGY 430
Por_Secre_tail pfam18962
Secretion system C-terminal sorting domain; Species that include Porphyromonas gingivalis, ...
 1881-1953 8.34e-06

Secretion system C-terminal sorting domain; Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber have on average twenty or more copies of this C-terminal domain, associated with sorting to the outer membrane and covalent modification. This domain targets proteins to type IX secretion systems and is secreted then cleaved off by a C-terminal signal peptidease. Based on similarity to other families it is likely that this domain adopts an immunoglobulin like fold.


Pssm-ID: 436869 [Multi-domain]  Cd Length: 75  Bit Score: 45.29  E-value: 8.34e-06
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1000279891 1881 IYPSPFQDDLTISYNASENSELSIEITDFSGKVVSRKSadvTIGQNNILINNLGNLAKGIYNIKVTDINTTQV 1953
Cdd:pfam18962    1 IYPNPAKDVLNISLKNSNSSNLNISIYDILGKLVKSNS---KTNGNNTKTIDVSNLSSGIYFVKINSGNGSTT 70
Por_Secre_tail TIGR04183
Por secretion system C-terminal sorting domain; Species that include Porphyromonas gingivalis, ...
 1881-1961 1.58e-04

Por secretion system C-terminal sorting domain; Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.


Pssm-ID: 275036 [Multi-domain]  Cd Length: 72  Bit Score: 41.62  E-value: 1.58e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1881 IYPSPFQDDLTIsYNASENSELSIEITDFSGKVVSRKSADVTIGQnnilinNLGNLAKGIYNIKVTdiNTTQVYVRKVLK 1960
Cdd:TIGR04183    1 IYPNPAKGTLII-ILLSSSGKVKVEIYDLSGKLVKKTTLNNSNSI------DLSNLSSGVYIVKIT--TGNGTITKKIIK 71


                   .
gi 1000279891 1961 K 1961
Cdd:TIGR04183   72 K 72
T9SSA_dep_M36 NF038113
T9SS-dependent M36 family metallopeptidase; Members of this family have an M36 family ...
 1875-1961 1.07e-03

T9SS-dependent M36 family metallopeptidase; Members of this family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal T9SS type A sorting domain (see TIGR04131).


Pssm-ID: 468356 [Multi-domain]  Cd Length: 868  Bit Score: 44.26  E-value: 1.07e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1875 ASDEV-----IIYPSPFQDDLTISYNASENSELSIEITDFSGKVVSRKSADVTIgqnnILINNLGNLAKGIYNIKVTDIN 1949
Cdd:NF038113   783 ATNEFgankfIIYPNPAKGEIFISFSNKDSGEVKVKVYDINGRLVLSDKVELTN----TKTINTSGLQSGIYIVKIEGGS 858

                           90
                   ....*....|..
gi 1000279891 1950 TTqvYVRKVLKK 1961
Cdd:NF038113   859 KS--YTEKLIVK 868
 
Name Accession Description Interval E-value
MSCRAMM_SdrD NF012181
MSCRAMM family adhesin SdrD; Features of this protein family include a YSIRK-type signal ...
 1169-1730 4.94e-95

MSCRAMM family adhesin SdrD; Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.


Pssm-ID: 467951 [Multi-domain]  Cd Length: 1379  Bit Score: 339.09  E-value: 4.94e-95
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1169 LGDFVWYDHNNNGIQDANENGVPGVTVTLYDDMNNI-LATTATDARGFYLFDNLAAGNYRVGFSNIPNGYVFTKVNEGsd 1247
Cdd:NF012181   572 IGNYVWEDTNKNGVQELGEVGVKGVTVVVYDNKTNKeVGRTITDEKGGYLIPNLPNGDYRVEFSNLPQGYEVTPSKQG-- 649

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1248 ltDSDANQATGLTGVITLgSGEVNLTVDAGIKESiglfgTATLGDRVWDDVNNNGIQDENEIGVSGVTVTLYAADGvTVI 1327
Cdd:NF012181   650 --NNEELDSNGVSSVITV-NGKDNLSADLGIYKP-----KYNLGDYVWEDTNKNGIQDQDEKGISGVTVTLKDENG-NVL 720

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1328 ATQITDPLGNYLFTGLNEGSYVVGFSNlPAGYTFSDANQGADDTKDGDVDATTGgktgiigLREGEDNLTIDAGIHQAAG 1407
Cdd:NF012181   721 KTVTTDADGKYKFTDLDNGNYKVEFTT-PEGYTPTTVTSGSDIEKDSNGLTTTG-------VINGADNMTLDSGFYKTPK 792

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1408 LaSLGNFVWFDLNQDGIQDEGEPGVPGVSVTLYSSAGTKLATTTTNAAGLYQFTGLTPGSYYVEFTNlPAGYEFTFKGAG 1487
Cdd:NF012181   793 Y-NLGNYVWEDTNKDGKQDSTEKGISGVTVTLKNENGEVLQTTKTDKDGKYQFTGLENGTYKVEFET-PSGYTPTQVGSG 870

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1488 GDSALDSDADPNTGetewvtLVSGQNYPDLDAGIFTERAGLGNFVWNDLDGDGIQDAGENGIPGVTVILyASDGITPISS 1567
Cdd:NF012181   871 TDEGIDSNGTSTTG------VIKDKDNDTIDSGFYKPTYNLGDYVWEDTNKNGVQDKDEKGISGVTVTL-KDENDKVLKT 943

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1568 AITDANGFYTFINLEPGTYAVGFSNiPEGAIFSSRHQGANSALDSDPDPITGktqlvtLVSGEYNPTIDAGVYIPQGAGL 1647
Cdd:NF012181   944 VTTDENGKYQFTDLNNGTYKVEFET-PSGYTPTSVTSGNDTEKDSNGLTTTG------VIKDADNMTLDSGFYKTPKYSL 1016

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1648 GDYVWFDANNDGVQDANESGVPGVTVTLYNGNGIAIKSAVTDGRGYYSFPNLTPGTYSVGFSTlPANMAFTSSNVGNDSL 1727
Cdd:NF012181  1017 GDYVWYDSNKDGKQDSTEKGIKDVKVTLLNEKGEVIGTTKTDENGKYRFDNLDSGKYKVIFEK-PAGLTQTGTNTTEDDK 1095


                   ...
gi 1000279891 1728 DND 1730
Cdd:NF012181  1096 DAD 1098
SdrD_B pfam17210
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This ...
 927-1038 2.36e-49

SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.


Pssm-ID: 435789 [Multi-domain]  Cd Length: 112  Bit Score: 170.86  E-value: 2.36e-49
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  927 ASLGDYVWNDLNKDGIQDANELGISGVTVTLYDVNGLPVATTVTDATGHYLFDKLTPGTYSVGFSQPIGYVFSPKNQGGN 1006
Cdd:pfam17210    1 ASIGDFVWEDANKNGIQDAGEPGISGVTVTLYDANGTVVGTTTTDANGKYLFTNLAPGTYYVEFTAPAGYTFTPQNQGSD 80

                           90       100       110
                   ....*....|....*....|....*....|..
gi 1000279891 1007 NATDSDVDPITGMTSPVTIVAGENNLTIDAGL 1038
Cdd:pfam17210   81 DALDSDADPATGLTATVTLASGESDLTIDAGL 112
SdrD_B pfam17210
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This ...
 1409-1521 5.65e-44

SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.


Pssm-ID: 435789 [Multi-domain]  Cd Length: 112  Bit Score: 155.45  E-value: 5.65e-44
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1409 ASLGNFVWFDLNQDGIQDEGEPGVPGVSVTLYSSAGTKLATTTTNAAGLYQFTGLTPGSYYVEFTNlPAGYEFTFKGAGG 1488
Cdd:pfam17210    1 ASIGDFVWEDANKNGIQDAGEPGISGVTVTLYDANGTVVGTTTTDANGKYLFTNLAPGTYYVEFTA-PAGYTFTPQNQGS 79

                           90       100       110
                   ....*....|....*....|....*....|...
gi 1000279891 1489 DSALDSDADPNTGETEWVTLVSGQNYPDLDAGI 1521
Cdd:pfam17210   80 DDALDSDADPATGLTATVTLASGESDLTIDAGL 112
SdrD_B pfam17210
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This ...
 1167-1278 4.85e-42

SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.


Pssm-ID: 435789 [Multi-domain]  Cd Length: 112  Bit Score: 150.06  E-value: 4.85e-42
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1167 GALGDFVWYDHNNNGIQDANENGVPGVTVTLYDDMNNILATTATDARGFYLFDNLAAGNYRVGFSNiPNGYVFTKVNEGS 1246
Cdd:pfam17210    1 ASIGDFVWEDANKNGIQDAGEPGISGVTVTLYDANGTVVGTTTTDANGKYLFTNLAPGTYYVEFTA-PAGYTFTPQNQGS 79

                           90       100       110
                   ....*....|....*....|....*....|...
gi 1000279891 1247 DLT-DSDANQATGLTGVITLGSGEVNLTVDAGI 1278
Cdd:pfam17210   80 DDAlDSDADPATGLTATVTLASGESDLTIDAGL 112
SdrD_B pfam17210
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This ...
 808-919 5.24e-42

SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.


Pssm-ID: 435789 [Multi-domain]  Cd Length: 112  Bit Score: 150.06  E-value: 5.24e-42
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  808 AQLGNYVWLDENKNGIQDANEVGVAGITVSLYDNSNNLISATVTDAYGKYLFNKLAPGNYHVGFTLPTNYVFTSKDQGGN 887
Cdd:pfam17210    1 ASIGDFVWEDANKNGIQDAGEPGISGVTVTLYDANGTVVGTTTTDANGKYLFTNLAPGTYYVEFTAPAGYTFTPQNQGSD 80

                           90       100       110
                   ....*....|....*....|....*....|..
gi 1000279891  888 DELDSDPDPVTGMTGNYVLAISDSNMTVDAGI 919
Cdd:pfam17210   81 DALDSDADPATGLTATVTLASGESDLTIDAGL 112
SdrD_B pfam17210
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This ...
 1046-1159 2.29e-39

SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.


Pssm-ID: 435789 [Multi-domain]  Cd Length: 112  Bit Score: 142.35  E-value: 2.29e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1046 ASLGNFVWNDVNNNGIQDANEVGVPGVTVTLYANDGiTVVSTTTTNEFGYYIFNNLTPDSYIVGFSgLPTGFSFVSNNQG 1125
Cdd:pfam17210    1 ASIGDFVWEDANKNGIQDAGEPGISGVTVTLYDANG-TVVGTTTTDANGKYLFTNLAPGTYYVEFT-APAGYTFTPQNQG 78

                           90       100       110
                   ....*....|....*....|....*....|....
gi 1000279891 1126 GDDELDSNPDPVTGKSAVVTLKPGDKNMSVDAGI 1159
Cdd:pfam17210   79 SDDALDSDADPATGLTATVTLASGESDLTIDAGL 112
SdrD_B pfam17210
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This ...
 1288-1402 9.25e-38

SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.


Pssm-ID: 435789 [Multi-domain]  Cd Length: 112  Bit Score: 137.73  E-value: 9.25e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1288 ATLGDRVWDDVNNNGIQDENEIGVSGVTVTLYAADGvTVIATQITDPLGNYLFTGLNEGSYVVGFSNlPAGYTFSDANQG 1367
Cdd:pfam17210    1 ASIGDFVWEDANKNGIQDAGEPGISGVTVTLYDANG-TVVGTTTTDANGKYLFTNLAPGTYYVEFTA-PAGYTFTPQNQG 78

                           90       100       110
                   ....*....|....*....|....*....|....*
gi 1000279891 1368 ADDTKDGDVDATTgGKTGIIGLREGEDNLTIDAGI 1402
Cdd:pfam17210   79 SDDALDSDADPAT-GLTATVTLASGESDLTIDAGL 112
SdrD_B pfam17210
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This ...
 1526-1639 4.04e-37

SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.


Pssm-ID: 435789 [Multi-domain]  Cd Length: 112  Bit Score: 135.81  E-value: 4.04e-37
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1526 AGLGNFVWNDLDGDGIQDAGENGIPGVTVILYASDGiTPISSAITDANGFYTFINLEPGTYAVGFSNiPEGAIFSSRHQG 1605
Cdd:pfam17210    1 ASIGDFVWEDANKNGIQDAGEPGISGVTVTLYDANG-TVVGTTTTDANGKYLFTNLAPGTYYVEFTA-PAGYTFTPQNQG 78

                           90       100       110
                   ....*....|....*....|....*....|....
gi 1000279891 1606 ANSALDSDPDPITGKTQLVTLVSGEYNPTIDAGV 1639
Cdd:pfam17210   79 SDDALDSDADPATGLTATVTLASGESDLTIDAGL 112
SdrD_B pfam17210
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This ...
 1645-1767 2.85e-34

SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.


Pssm-ID: 435789 [Multi-domain]  Cd Length: 112  Bit Score: 127.72  E-value: 2.85e-34
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1645 AGLGDYVWFDANNDGVQDANESGVPGVTVTLYNGNGIAIKSAVTDGRGYYSFPNLTPGTYSVGFSTlPANMAFTSSNVG- 1723
Cdd:pfam17210    1 ASIGDFVWEDANKNGIQDAGEPGISGVTVTLYDANGTVVGTTTTDANGKYLFTNLAPGTYYVEFTA-PAGYTFTPQNQGs 79

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....
gi 1000279891 1724 NDSLDNDVvtivnnpngngLPVSGKTLPITLVKGEYNPTIDAGL 1767
Cdd:pfam17210   80 DDALDSDA-----------DPATGLTATVTLASGESDLTIDAGL 112
ClfA COG4932
Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing ...
 1012-1753 1.42e-24

Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443959 [Multi-domain]  Cd Length: 689  Bit Score: 111.60  E-value: 1.42e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1012 DVDPITGMTSPVTIVAGENNLTIDAGLYLQNANTASLGNFVWNDVNNNGIQDANEVGVPGVTVTLYANDGITVVSTTTTN 1091
Cdd:COG4932      1 SVGAKGAGTGVGTVIVEGAGSGSLVAVTTGAVLGLALGSTGGTAGSAAAINSAPATGTATGTSAGATAVIVIAAGLTATP 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1092 EFGYYIFNNLTPDSYIVGFSGLPTGFSFVSNNQGGDDELDSNPDPVTGKSAVVTLKPGDKNMSVDAGIHNPTLPIGALGD 1171
Cdd:COG4932     81 TETASGLGGDATVTTTANVAKVTNGAAANLTVNADGTASNAGTLAKGAETATGNLDGDAGDVTVTAAATDGVNDVDGNGA 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1172 FVWYDHNNNGIQDANEN-GVPGVTVTLYDDMNNILATTATDARGFYLFDNLAAGNYRVGFSNIPNGYVFtkvnegsdltd 1250
Cdd:COG4932    161 SVTDSVTLKKVDDGDTGkPLPGATFTLYDSDGTLVKTVTTDADGKYTFTDLPPGTYTLTETKAPEGYVL----------- 229

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1251 sDANQATGLTGVITLGSGEVNLTVDAGIKesigLFGTATLGDRVWDDVNNNGIqdeneigvSGVTVTLYAADGVTVIATQ 1330
Cdd:COG4932    230 -DTKDPTGATITVTVNAGGTVTVTLKNTP----KYTKGSVTVTKTDADTGEPL--------AGATFTLTDADGNTVVTTT 296

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1331 I--TDPLGNYLFTGLNEGSYVVGFSNLPAGYTfsdanqgaddtKDGDVDATTGGKtgiiglrEGEDNLTIDAGIhqaaGL 1408
Cdd:COG4932    297 VtvTDADGSYTFTDLPPGTYTVTETKAPAGYD-----------LDGEAVKVTITA-------GQTTTVTVTNGN----NE 354

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1409 ASLGNFVWFDLNQDGiqdeGEPGVPGVSVTLYSSAGTKLATTTTNAAGLYQFTGLTPGSYYVEFTNLPAGYE-----FTF 1483
Cdd:COG4932    355 VKTGSVTLTKVDADD----GEAPLAGAEFTLTDADGTVVATITTDADGTASFKGLAPGTYTLTETKAPEGYTldstpITV 430

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1484 K-GAGGDSALDSDADPNTGETEWVTLVSgqnyPDLDAGIFTERAGLGNFVWNDLDGDgiqdagengIPGVTVILYASDGI 1562
Cdd:COG4932    431 TvTDGGTGAIDTITNERKKGSVQVTKVD----APLAGATFTLTDADGTVVTLTTDAD---------LAGATFEADGKVVT 497

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1563 TpissaiTDANGFYTFINLEPGTY--AVGFSNIPEGAIFSSRHQGANSALDSDPDPITGKTQLVTLVSGEYNPTIDAGVY 1640
Cdd:COG4932    498 T------TDASGKYTFKNLPPGTYtdAGGSATVITDDTDGTVGDEATGTDPEVTVTGKSTTTTPDVALLTNLGTTEDALT 571

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1641 IPQGAGLGDYVWFDANNDGVQDANESGVPGVTVTLYNGNGIAIKSAV--TDGRGYYSFPNLTPGTYSVGFSTLPANMAFT 1718
Cdd:COG4932    572 SLAKTGDEVGKGLTLTTTTTVDTLDTNATEKTETVTVTAQLIGVKTTklTDTTDPKGGTVEEATTTGGTANTGKTGTDLT 651

                          730       740       750
                   ....*....|....*....|....*....|....*
gi 1000279891 1719 SSNVGNDSLDNDVVTIVNNPNGNGLPVSGKTLPIT 1753
Cdd:COG4932    652 DDTTVTSTTNTATSVEDTTDVDNKDAFTGGTEPGG 686
ClfA COG4932
Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing ...
 1133-1849 2.23e-21

Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443959 [Multi-domain]  Cd Length: 689  Bit Score: 101.59  E-value: 2.23e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1133 NPDPVTGKSAVVTLKPGDKNMSVDAGIHNPTLPIGALGDFVWYDHNNNGIQDANENGVPGVTVTLYDDMNNILATTATDA 1212
Cdd:COG4932      1 SVGAKGAGTGVGTVIVEGAGSGSLVAVTTGAVLGLALGSTGGTAGSAAAINSAPATGTATGTSAGATAVIVIAAGLTATP 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1213 RGFYLFDNLAAGNYRVGFSNIPNGYVFTKVNEGSDLTDSDANQATGLTGVITLGSGEVNLTVDAGIKESIGLFGTATLGD 1292
Cdd:COG4932     81 TETASGLGGDATVTTTANVAKVTNGAAANLTVNADGTASNAGTLAKGAETATGNLDGDAGDVTVTAAATDGVNDVDGNGA 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1293 RVWDDVNNNGIQDENE-IGVSGVTVTLYAADGVTViATQITDPLGNYLFTGLNEGSYVVGFSNLPAGYTFSDANQGADDT 1371
Cdd:COG4932    161 SVTDSVTLKKVDDGDTgKPLPGATFTLYDSDGTLV-KTVTTDADGKYTFTDLPPGTYTLTETKAPEGYVLDTKDPTGATI 239

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1372 kdgdvdattggktgiiglregedNLTIDAGIHQAAGLASLGNFVWFDLNQDGIQDEGEPGVPGVSVTLYSSAGTKLATTT 1451
Cdd:COG4932    240 -----------------------TVTVNAGGTVTVTLKNTPKYTKGSVTVTKTDADTGEPLAGATFTLTDADGNTVVTTT 296

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1452 ---TNAAGLYQFTGLTPGSYYVEFTNLPAGYEFTfkgaggdsaldsdadpntGETEWVTLVSGQNYpDLDAGIFTERAGL 1528
Cdd:COG4932    297 vtvTDADGSYTFTDLPPGTYTVTETKAPAGYDLD------------------GEAVKVTITAGQTT-TVTVTNGNNEVKT 357

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1529 GNFVWNDLDGDGiqdaGENGIPGVTVILYASDGiTPISSAITDANGFYTFINLEPGTYAVGFSNIPEGAIfssrhqgans 1608
Cdd:COG4932    358 GSVTLTKVDADD----GEAPLAGAEFTLTDADG-TVVATITTDADGTASFKGLAPGTYTLTETKAPEGYT---------- 422

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1609 aLDSDPDPIT---GKTQLVTLVSGEYNPTIDAGVYIPQGAGLGDYVWFDANNDGVQDANESGVPGVTVTLYNgngiaIKS 1685
Cdd:COG4932    423 -LDSTPITVTvtdGGTGAIDTITNERKKGSVQVTKVDAPLAGATFTLTDADGTVVTLTTDADLAGATFEADG-----KVV 496

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1686 AVTDGRGYYSFPNLTPGTYSVGFSTLPANMAFTSSNVGNDSLDNDVVTIVNNPNGNGLPVSGKTLPITLVKGEYNPTIDA 1765
Cdd:COG4932    497 TTTDASGKYTFKNLPPGTYTDAGGSATVITDDTDGTVGDEATGTDPEVTVTGKSTTTTPDVALLTNLGTTEDALTSLAKT 576

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1766 GLKIQFPLGVAGIKLYATLSGSTakVDWVTTNEENVSYFEIERSIDNKNFIKVAAKTAVGNTNGDYNYTLNDNVSTLLKL 1845
Cdd:COG4932    577 GDEVGKGLTLTTTTTVDTLDTNA--TEKTETVTVTAQLIGVKTTKLTDTTDPKGGTVEEATTTGGTANTGKTGTDLTDDT 654


                   ....
gi 1000279891 1846 DAIY 1849
Cdd:COG4932    655 TVTS 658
ClfA COG4932
Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing ...
 650-1405 3.27e-20

Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443959 [Multi-domain]  Cd Length: 689  Bit Score: 97.74  E-value: 3.27e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  650 AGGNLQIIGAVRGGLAPYTYEVFETFPTNNPQPPQSSNVFVISGNYTLIRLRVVDACGNTSLQDVAVRPPAQPKILLDKQ 729
Cdd:COG4932      2 VGAKGAGTGVGTVIVEGAGSGSLVAVTTGAVLGLALGSTGGTAGSAAAINSAPATGTATGTSAGATAVIVIAAGLTATPT 81

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  730 LPVCNLTDFTMSVDTSLPNQVYEWKNPAGTVIGTSYSVSLNSITLADTGTYSVRVTIPGTCYDKTATFKLRGKDFDCIAQ 809
Cdd:COG4932     82 ETASGLGGDATVTTTANVAKVTNGAAANLTVNADGTASNAGTLAKGAETATGNLDGDAGDVTVTAAATDGVNDVDGNGAS 161

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  810 LGNYVWLDENKNGiqdANEVGVAGITVSLYDNSNNLISATVTDAYGKYLFNKLAPGNYHVGFT-LPTNYVFTSKDQGGND 888
Cdd:COG4932    162 VTDSVTLKKVDDG---DTGKPLPGATFTLYDSDGTLVKTVTTDADGKYTFTDLPPGTYTLTETkAPEGYVLDTKDPTGAT 238

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  889 eldsdpdpvtgmtgnYVLAISDSNMTVDAGIYFVQPVEASLGDYVwndlnkdgIQDANELGISGVTVTLYDVNGLPV--- 965
Cdd:COG4932    239 ---------------ITVTVNAGGTVTVTLKNTPKYTKGSVTVTK--------TDADTGEPLAGATFTLTDADGNTVvtt 295

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  966 ATTVTDATGHYLFDKLTPGTYSVGFSQ-PIGYVfspknqggnnatdsdvdpITGMTSPVTIVAGEN-NLTIDAGLylqna 1043
Cdd:COG4932    296 TVTVTDADGSYTFTDLPPGTYTVTETKaPAGYD------------------LDGEAVKVTITAGQTtTVTVTNGN----- 352

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1044 NTASLGNFVWNDVNnngiQDANEVGVPGVTVTLYANDGiTVVSTTTTNEFGYYIFNNLTPDSYIVGFSGLPTGFsfvsnn 1123
Cdd:COG4932    353 NEVKTGSVTLTKVD----ADDGEAPLAGAEFTLTDADG-TVVATITTDADGTASFKGLAPGTYTLTETKAPEGY------ 421

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1124 qggddELDSNPDPVT----GKSAVVTLKPGDKNMSVDAGIHNPTLPIGAlgdFVWYDHNNNGIQDANENGVPGVTVTLYD 1199
Cdd:COG4932    422 -----TLDSTPITVTvtdgGTGAIDTITNERKKGSVQVTKVDAPLAGAT---FTLTDADGTVVTLTTDADLAGATFEADG 493

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1200 DmnnilATTATDARGFYLFDNLAAGNYRvgfsniPNGYVFTKVNEGSDLTDSDANQATGLTGVITLGSGEVNLTVDAGIK 1279
Cdd:COG4932    494 K-----VVTTTDASGKYTFKNLPPGTYT------DAGGSATVITDDTDGTVGDEATGTDPEVTVTGKSTTTTPDVALLTN 562

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1280 ESIGLFGTATLGDRVWDDVNNNGIQDENEIGVSGVTVTLYAADGVTVIATQITDPLGNYLFTGLNEGSYVVGFSNLPAGY 1359
Cdd:COG4932    563 LGTTEDALTSLAKTGDEVGKGLTLTTTTTVDTLDTNATEKTETVTVTAQLIGVKTTKLTDTTDPKGGTVEEATTTGGTAN 642

                          730       740       750       760
                   ....*....|....*....|....*....|....*....|....*.
gi 1000279891 1360 TFSDANQGADDTKDGDVDATTGGKTGIIGLREGEDNLTIDAGIHQA 1405
Cdd:COG4932    643 TGKTGTDLTDDTTVTSTTNTATSVEDTTDVDNKDAFTGGTEPGGTI 688
ClfA COG4932
Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing ...
 831-1287 2.72e-13

Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443959 [Multi-domain]  Cd Length: 689  Bit Score: 75.39  E-value: 2.72e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  831 VAGITVSLYDNSNNLI---SATVTDAYGKYLFNKLAPGNYHVGFTL-PTNYVftskdqggndeLDSDPDPVTGMTGNyvl 906
Cdd:COG4932    277 LAGATFTLTDADGNTVvttTVTVTDADGSYTFTDLPPGTYTVTETKaPAGYD-----------LDGEAVKVTITAGQ--- 342

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  907 aisDSNMTVDAGIYFVQPVEASLGDyvwndlnKDgiQDANELGISGVTVTLYDVNGLPVATTVTDATGHYLFDKLTPGTY 986
Cdd:COG4932    343 ---TTTVTVTNGNNEVKTGSVTLTK-------VD--ADDGEAPLAGAEFTLTDADGTVVATITTDADGTASFKGLAPGTY 410

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  987 SVGFSQ-PIGYVFSPKNQggnnatdsdvdpitgmtsPVTIVAGENNLTIDAGlylqnaNTASLGNFVWNDVNNngiqdan 1065
Cdd:COG4932    411 TLTETKaPEGYTLDSTPI------------------TVTVTDGGTGAIDTIT------NERKKGSVQVTKVDA------- 459

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1066 evGVPGVTVTLYANDGITVVSTT-----------------TTNEFGYYIFNNLTPDSYIVGFSGLPTGFSFVSNNQGGDD 1128
Cdd:COG4932    460 --PLAGATFTLTDADGTVVTLTTdadlagatfeadgkvvtTTDASGKYTFKNLPPGTYTDAGGSATVITDDTDGTVGDEA 537

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1129 ELDSNPDPVTGKSAVVTLKPGDKNMSVDAGIHNPTLPIGALGDFVWYDHNNNGIQDANENGVPGVTVTLYDdmnnilaTT 1208
Cdd:COG4932    538 TGTDPEVTVTGKSTTTTPDVALLTNLGTTEDALTSLAKTGDEVGKGLTLTTTTTVDTLDTNATEKTETVTV-------TA 610

                          410       420       430       440       450       460       470
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1000279891 1209 ATDARGFYLFDNLAAGNYRVGFSNIPNGYVFTKVNEGSDLTDSDANQATGLTGVITLGSGEVNLTVDAGIKESIGLFGT 1287
Cdd:COG4932    611 QLIGVKTTKLTDTTDPKGGTVEEATTTGGTANTGKTGTDLTDDTTVTSTTNTATSVEDTTDVDNKDAFTGGTEPGGTIV 689
YfaS COG2373
Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function ...
 1428-1602 7.20e-09

Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only];


Pssm-ID: 441940 [Multi-domain]  Cd Length: 1605  Bit Score: 61.25  E-value: 7.20e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1428 GEPgVPGVSVTLYSSAGTKLATTTTNAAGLYQFTGLTPGSYYVEFTNLPA--GYEFTFKGAGGDSALD-SDADpntgete 1504
Cdd:COG2373    288 GKP-VAGAEVELYDRNGQVLATATTDADGLARFPAGDRGEGGRAPALLVArkGGDFAFLDLDDGPALDlSDFD------- 359

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1505 wvtlVSG-QNYPDLDAGIFTERaGL---GNFVW-----NDLDGDGIQdagenGIPgVTVILYASDGiTPISSAI--TDAN 1573
Cdd:COG2373    360 ----VGGrAPPGGLDAFLFTDR-GIyrpGETVHlkallRDADGKAPA-----GLP-LTLELTDPDG-KEVRRQTltLNEF 427

                          170       180       190
                   ....*....|....*....|....*....|....
gi 1000279891 1574 GFYTF-INLEP----GTYAVGFSNIPEGAIFSSR 1602
Cdd:COG2373    428 GGYSFsFPLPEdaptGTWRLELYVDPKPALGSKS 461
CarboxypepD_reg pfam13620
Carboxypeptidase regulatory-like domain;
1660-1706 3.08e-08

Carboxypeptidase regulatory-like domain;


Pssm-ID: 433354 [Multi-domain]  Cd Length: 81  Bit Score: 52.67  E-value: 3.08e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 1000279891 1660 VQDANESGVPGVTVTLYNGNGIAIKSAVTDGRGYYSFPNLTPGTYSV 1706
Cdd:pfam13620    6 VTDPSGAPVPGATVTVTNTDTGTVRTTTTDADGRYRFPGLPPGTYTV 52
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
 1016-1848 4.06e-07

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 55.54  E-value: 4.06e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1016 ITGMTSPVTIVAGENNLTIDAGLYLQNANTASLGNFVWNDVNNNGIQDANEVGVPGVTVTLYANDGITVVSTTTTNEFGY 1095
Cdd:COG3210    814 VTGSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANA 893

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1096 YIFNNLTPDSYIVGFSGLPTGFSFVSNNQGGDDELDSNPDPVTGKSAVVTLKPGDKNMSVDAGIHNPTLPIGALGDFVWY 1175
Cdd:COG3210    894 GTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAG 973

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1176 DHNNNGIQDANENGVPGVTVTLYDDMNNILATTATDARGFYLFDNLAAGNYRVGFSNIPNGYVFTKVNEGSDLTDSDANQ 1255
Cdd:COG3210    974 SSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGI 1053

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1256 ATGLTGVITLGSGEVNLTVDAGIKESIGLFGTATLGDRVWDDVNNNGIQDENEIGVSGVTVTLYAADGVTVIATQITDPL 1335
Cdd:COG3210   1054 SGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTGGVTASKVGGTTTVGATGTS 1133

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1336 GNYLFTGLNEGSYVVGFSNLPAGYTFSDANQGADDTKDGDVDATTGGKTGIIGLREGEDNLTIDAGIHQAAGLASLGNFV 1415
Cdd:COG3210   1134 TASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTDLKGGDSTGGSTTTIGT 1213

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1416 WFDLNQDGIQDEGEPGVPGVSVTLYSSAGTKLATTTTNAAGLYQFTGLTPGSYYVEFTNLPAGYEFTFKGAGGDSALDSD 1495
Cdd:COG3210   1214 TNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNAGATATGSTVDIGSTSA 1293

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1496 ADPNTGETEWVTLVSGQNYPDLDAGIFTERAGLGNFVWNDLDGDGIQDAGENGIPGVTVILYASDGITPISSAITDANGF 1575
Cdd:COG3210   1294 TSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNGGNGATDSAAGAGSGGAAGS 1373

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1576 YTFINLEPGTYAVGFSnipeGAIFSSRHQGANSALDSDPDPITGKTQLVTLVSGEYNPTIDAGVYIPQGAGLGDYVWFDA 1655
Cdd:COG3210   1374 LAATAGAGTVLTGAGN----NTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTGGTGNTTGTSVAGAG 1449

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1656 NNDGVQDANESGVPGVTVTLYNGNGIAIKSAVTDGRGYYSFPNLTPGTYSVGFSTLPANMAFTSSNVGNDSLDNDVVTIV 1735
Cdd:COG3210   1450 GGNADASAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTAGGTTAEVAKASLEGGEG 1529

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1736 NNPNGNGLPVSGKTLPITLVKGEYNPTIDAGLKIQFPLGVAGIKLYATLSGSTAKVDWVTTNEENVSYFEIERSIDNKNF 1815
Cdd:COG3210   1530 TYGGSSVAEAGTGGGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQAPTAGNTATLTLSLAEGTNAEY 1609

                          810       820       830
                   ....*....|....*....|....*....|...
gi 1000279891 1816 IKVAAKTAVGNTNGDYNYTLNDNVSTLLKLDAI 1848
Cdd:COG3210   1610 GGTTNVTSGTAGNAGATGANSNTVVTTNGGEGV 1642
CarboxypepD_reg pfam13620
Carboxypeptidase regulatory-like domain;
942-996 8.31e-07

Carboxypeptidase regulatory-like domain;


Pssm-ID: 433354 [Multi-domain]  Cd Length: 81  Bit Score: 48.43  E-value: 8.31e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1000279891  942 IQDANELGISGVTVTLYDVNGLPVATTVTDATGHYLFDKLTPGTYSVGFSQPiGY 996
Cdd:pfam13620    6 VTDPSGAPVPGATVTVTNTDTGTVRTTTTDADGRYRFPGLPPGTYTVTVSAP-GF 59
CarboxypepD_reg pfam13620
Carboxypeptidase regulatory-like domain;
1182-1228 2.61e-06

Carboxypeptidase regulatory-like domain;


Pssm-ID: 433354 [Multi-domain]  Cd Length: 81  Bit Score: 46.89  E-value: 2.61e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 1000279891 1182 IQDANENGVPGVTVTLYDDMNNILATTATDARGFYLFDNLAAGNYRV 1228
Cdd:pfam13620    6 VTDPSGAPVPGATVTVTNTDTGTVRTTTTDADGRYRFPGLPPGTYTV 52
CarboxypepD_reg pfam13620
Carboxypeptidase regulatory-like domain;
1428-1473 3.71e-06

Carboxypeptidase regulatory-like domain;


Pssm-ID: 433354 [Multi-domain]  Cd Length: 81  Bit Score: 46.50  E-value: 3.71e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 1000279891 1428 GEPgVPGVSVTLYSSAGTKLATTTTNAAGLYQFTGLTPGSYYVEFT 1473
Cdd:pfam13620   11 GAP-VPGATVTVTNTDTGTVRTTTTDADGRYRFPGLPPGTYTVTVS 55
YfaS COG2373
Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function ...
 950-1096 6.71e-06

Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only];


Pssm-ID: 441940 [Multi-domain]  Cd Length: 1605  Bit Score: 51.62  E-value: 6.71e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  950 ISGVTVTLYDVNGLPVATTVTDATGHYLFDKLTPGTYS-------VGFSQPIGYVfSPKNQGGNNATDSDVDpitGMTSP 1022
Cdd:COG2373    291 VAGAEVELYDRNGQVLATATTDADGLARFPAGDRGEGGrapallvARKGGDFAFL-DLDDGPALDLSDFDVG---GRAPP 366

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1023 VTIVA-----------GEnnlTIDAGLYLQNANTASLGnfvwndvnnngiqdanevGVPgVTVTLYANDGITVVSTT-TT 1090
Cdd:COG2373    367 GGLDAflftdrgiyrpGE---TVHLKALLRDADGKAPA------------------GLP-LTLELTDPDGKEVRRQTlTL 424


                   ....*.
gi 1000279891 1091 NEFGYY 1096
Cdd:COG2373    425 NEFGGY 430
Por_Secre_tail pfam18962
Secretion system C-terminal sorting domain; Species that include Porphyromonas gingivalis, ...
 1881-1953 8.34e-06

Secretion system C-terminal sorting domain; Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber have on average twenty or more copies of this C-terminal domain, associated with sorting to the outer membrane and covalent modification. This domain targets proteins to type IX secretion systems and is secreted then cleaved off by a C-terminal signal peptidease. Based on similarity to other families it is likely that this domain adopts an immunoglobulin like fold.


Pssm-ID: 436869 [Multi-domain]  Cd Length: 75  Bit Score: 45.29  E-value: 8.34e-06
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1000279891 1881 IYPSPFQDDLTISYNASENSELSIEITDFSGKVVSRKSadvTIGQNNILINNLGNLAKGIYNIKVTDINTTQV 1953
Cdd:pfam18962    1 IYPNPAKDVLNISLKNSNSSNLNISIYDILGKLVKSNS---KTNGNNTKTIDVSNLSSGIYFVKINSGNGSTT 70
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
 965-1461 2.71e-05

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 49.39  E-value: 2.71e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  965 VATTVTDATGHYLFDKLTPGTYSVGFSQPIGYVFSPKNQGGNNATDSDVDPITGMTSPVTIVAGENNLTIDAGLYLQNAN 1044
Cdd:COG4625      1 GGGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGG 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1045 TASLGNFVWNDVNNNGIQDANEVGVPGVTVTLYANDGITVVSTTTTNEFGYYIFNNLTPDSYIVGFSGLPTGFSFVSNNQ 1124
Cdd:COG4625     81 GGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGA 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1125 GGDDELDSNPDPVTGKSAVVTLKPGDKNMSVDAGIHNPTLPIGALGDFVWYDHNNNGIQDANENGVPGVTVTLYDDMNNI 1204
Cdd:COG4625    161 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGG 240

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1205 LATTATDARGFYLFDNLAAGNYRVGFSNIPNGYVFTKVNEGSDLTDSDANQATGLTGVITLGSGEVNLTVDAGIKESIGL 1284
Cdd:COG4625    241 GGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 320

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1285 FGTATLGDRVWDDVNN--NGIQDENEIGVSGVTVTLYAADGVTVIATQITDPLGNYLFTGLNEGSYVVGFSNLPAGYTFS 1362
Cdd:COG4625    321 GGGGGGGGGGGGGAGGggGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGG 400

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1363 DANQGADDTKDGDVDATTGGKTGIIGLREGEDNLTIDAGIHQAAGLASLGNFVWFDLNQDGIQDEGEPGVPGVSVTLYSS 1442
Cdd:COG4625    401 GGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTG 480

                          490
                   ....*....|....*....
gi 1000279891 1443 AGTKLATTTTNAAGLYQFT 1461
Cdd:COG4625    481 NNTYTGTTTVNGGGNYTQS 499
Por_Secre_tail TIGR04183
Por secretion system C-terminal sorting domain; Species that include Porphyromonas gingivalis, ...
 1881-1961 1.58e-04

Por secretion system C-terminal sorting domain; Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.


Pssm-ID: 275036 [Multi-domain]  Cd Length: 72  Bit Score: 41.62  E-value: 1.58e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1881 IYPSPFQDDLTIsYNASENSELSIEITDFSGKVVSRKSADVTIGQnnilinNLGNLAKGIYNIKVTdiNTTQVYVRKVLK 1960
Cdd:TIGR04183    1 IYPNPAKGTLII-ILLSSSGKVKVEIYDLSGKLVKKTTLNNSNSI------DLSNLSSGVYIVKIT--TGNGTITKKIIK 71


                   .
gi 1000279891 1961 K 1961
Cdd:TIGR04183   72 K 72
CarboxypepD_reg pfam13620
Carboxypeptidase regulatory-like domain;
823-869 1.61e-04

Carboxypeptidase regulatory-like domain;


Pssm-ID: 433354 [Multi-domain]  Cd Length: 81  Bit Score: 41.88  E-value: 1.61e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 1000279891  823 IQDANEVGVAGITVSLYDNSNNLISATVTDAYGKYLFNKLAPGNYHV 869
Cdd:pfam13620    6 VTDPSGAPVPGATVTVTNTDTGTVRTTTTDADGRYRFPGLPPGTYTV 52
SpaA pfam17802
Prealbumin-like fold domain; This entry contains a prealbumin-like domain from a wide variety ...
 1426-1480 1.83e-04

Prealbumin-like fold domain; This entry contains a prealbumin-like domain from a wide variety of bacterial surface proteins. This entry corresponds to domain 1 and domain 3 of SpaA from Corynebacterium diphtheriae. Some members of this family contain an isopeptide bond.


Pssm-ID: 465513 [Multi-domain]  Cd Length: 72  Bit Score: 41.42  E-value: 1.83e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1000279891 1426 DEGEPgVPGVSVTLYSS----AGTKLATTTTNAAGLYQFTGLTPGSYYVEFTNLPAGYE 1480
Cdd:pfam17802    1 DTGKP-LAGAEFTLYDAdgtvDGKVVGTLTTDEDGKATFDGLPPGTYTLKETKAPDGYV 58
CarboxypepD_reg pfam13620
Carboxypeptidase regulatory-like domain;
1061-1108 2.45e-04

Carboxypeptidase regulatory-like domain;


Pssm-ID: 433354 [Multi-domain]  Cd Length: 81  Bit Score: 41.50  E-value: 2.45e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 1000279891 1061 IQDANEVGVPGVTVTLyANDGITVVSTTTTNEFGYYIFNNLTPDSYIV 1108
Cdd:pfam13620    6 VTDPSGAPVPGATVTV-TNTDTGTVRTTTTDADGRYRFPGLPPGTYTV 52
CarboxypepD_reg pfam13620
Carboxypeptidase regulatory-like domain;
1541-1588 2.81e-04

Carboxypeptidase regulatory-like domain;


Pssm-ID: 433354 [Multi-domain]  Cd Length: 81  Bit Score: 41.50  E-value: 2.81e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 1000279891 1541 IQDAGENGIPGVTVILYASDGiTPISSAITDANGFYTFINLEPGTYAV 1588
Cdd:pfam13620    6 VTDPSGAPVPGATVTVTNTDT-GTVRTTTTDADGRYRFPGLPPGTYTV 52
T9SSA_dep_M36 NF038113
T9SS-dependent M36 family metallopeptidase; Members of this family have an M36 family ...
 1875-1961 1.07e-03

T9SS-dependent M36 family metallopeptidase; Members of this family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal T9SS type A sorting domain (see TIGR04131).


Pssm-ID: 468356 [Multi-domain]  Cd Length: 868  Bit Score: 44.26  E-value: 1.07e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1875 ASDEV-----IIYPSPFQDDLTISYNASENSELSIEITDFSGKVVSRKSADVTIgqnnILINNLGNLAKGIYNIKVTDIN 1949
Cdd:NF038113   783 ATNEFgankfIIYPNPAKGEIFISFSNKDSGEVKVKVYDINGRLVLSDKVELTN----TKTINTSGLQSGIYIVKIEGGS 858

                           90
                   ....*....|..
gi 1000279891 1950 TTqvYVRKVLKK 1961
Cdd:NF038113   859 KS--YTEKLIVK 868
bMG3 pfam11974
Bacterial alpha-2-macroglobulin MG3 domain; This is the MG3 domain from bacterial ...
 1426-1465 1.19e-03

Bacterial alpha-2-macroglobulin MG3 domain; This is the MG3 domain from bacterial alpha2-macroglobulins.


Pssm-ID: 432232 [Multi-domain]  Cd Length: 102  Bit Score: 40.27  E-value: 1.19e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 1000279891 1426 DEGEPgVPGVSVTLYSSAGTKLATTTTNAAGLYQFTGLTP 1465
Cdd:pfam11974   23 DSGKP-VAGVEVRLLDCNGQVLATGTTDAQGHARFEGPLT 61
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
 1186-1696 1.25e-03

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 44.00  E-value: 1.25e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1186 NENGVPGVTVTLYDDMNNILATTATDARGFYLFDNLAAGNYRVGFSNIPNGYVFTKVNEGSDLTDSDANQATGLTGVITL 1265
Cdd:COG4625      1 GGGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGG 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1266 GSGEVNLTVDAGIKESIGLFGTATLGDRVWDDVNNNGIQDENEIGVSGVTVTLYAADGVTVIATQITDPLGNYLFTGLNE 1345
Cdd:COG4625     81 GGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGA 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1346 GSYVVGFSNLPAGYTFSDANQGADDTKDGDVDATTGGKTGIIGLREGEDNLTIDAGIHQAAGLASLGNFVWFDLNQDGIQ 1425
Cdd:COG4625    161 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGG 240

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1426 DegepgvpGVSVTLYSSAGTKLATTTTNAAGLYQFTGLTPGSYYVEFTNLPAGYEFTFKGAGGDSALDSDADPNTGETEW 1505
Cdd:COG4625    241 G-------GGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGG 313

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1506 VTLVSGQNYPDLDAGIFTERAGLGNFVWNDLDGDGIQDAGENGIPGVTVILYASDGITPISSAITDANGFYTFINLEPGT 1585
Cdd:COG4625    314 GGGGGGGGGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGG 393

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1586 YAVGFSNIPEGAIFSSrhqGANSALDSDPDPITGKTQLVTLVSGEYNPTIDAGVYIPQGAGLGDYVWFDANNDGVQDANE 1665
Cdd:COG4625    394 GGAGGGGGGGGAGGTG---GGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSG 470

                          490       500       510
                   ....*....|....*....|....*....|.
gi 1000279891 1666 SGVPGVTVTlynGNGIAIKSAVTDGRGYYSF 1696
Cdd:COG4625    471 SGAGTLTLT---GNNTYTGTTTVNGGGNYTQ 498
YfaS COG2373
Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function ...
 1668-1703 2.43e-03

Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only];


Pssm-ID: 441940 [Multi-domain]  Cd Length: 1605  Bit Score: 43.15  E-value: 2.43e-03
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 1000279891 1668 VPGVTVTLYNGNGIAIKSAVTDGRGYYSFPNLTPGT 1703
Cdd:COG2373    291 VAGAEVELYDRNGQVLATATTDADGLARFPAGDRGE 326
bMG3 pfam11974
Bacterial alpha-2-macroglobulin MG3 domain; This is the MG3 domain from bacterial ...
 950-985 2.52e-03

Bacterial alpha-2-macroglobulin MG3 domain; This is the MG3 domain from bacterial alpha2-macroglobulins.


Pssm-ID: 432232 [Multi-domain]  Cd Length: 102  Bit Score: 39.12  E-value: 2.52e-03
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 1000279891  950 ISGVTVTLYDVNGLPVATTVTDATGHYLFDKLTPGT 985
Cdd:pfam11974   28 VAGVEVRLLDCNGQVLATGTTDAQGHARFEGPLTRD 63
RhsA COG3209
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ...
 807-1473 3.23e-03

Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];


Pssm-ID: 442442 [Multi-domain]  Cd Length: 1103  Bit Score: 42.44  E-value: 3.23e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  807 IAQLGNYVWLDENKNGIQDANEVGVAGITVSLYDNSNNLISATVTDAYGKYLFNKLAPGNYHVGFTLPTNYVFTSKDQGG 886
Cdd:COG3209     97 AAAGGGATLTGLAAATASAGRLVSTGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTGLAGGGASAYGLTLGGA 176

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  887 NDELDSDPDPVTGMTGNYVLAISDSNMTVDAGIYFVQPVEASLGDYVWNDLNKDGIQDANELGISGVTVTLYDVNGLPVA 966
Cdd:COG3209    177 AAGPATGVGTGAVTLATGLAGSALLALGSGAILGGLAGAYSGSATTATGTALGTPASVAATVTGSATGAAGAGAAVATAA 256

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  967 TTVTDATGHYLFDKLTPGTYSVGFSQPIGYVFSPKNQGGNNATDSDVDPITGMTSPVTIVAGENNLTIDAGLYLQNANTA 1046
Cdd:COG3209    257 TTLGGTTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAGGTTTAAGTTGTAAVSGAADAGTTT 336

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1047 SLGNFVWNDVNNNGIQDANEVGVPGVTVTLYANDGITVVSTTTTNEFGYYIFNNLTPDSYIVGFSGLPTGFSFVSNNQGG 1126
Cdd:COG3209    337 TTGTGTGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGSSTTGVGAGTTTTSTTGGD 416

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1127 DDELDSNPDPVTGKSAVVTLKPGDKNMSVDAGIHNPTLPIGALGDFVWYDHNNNGIQDANENGVPGVTVTLYDDMNNILA 1206
Cdd:COG3209    417 GGPATAAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTEAGTGGGTLTSGSAGATTL 496

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1207 TTATDARGFYLFDNLAAGNYRVGFSNIPNGYVFTKVNEGSDLTDSDANQATGLTGVITLGSGEVNLTVDAGIKESIGLFG 1286
Cdd:COG3209    497 GTDTTLDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGTSTGTGGTGTVTTTGDGTG 576

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1287 TATLGDRVWDDVNNNGIQDENEIGVSGVTVTLYAADGVTVIATQITDPLGNYLFTGLNEGSYVVGFSNLPAGYTFSDANQ 1366
Cdd:COG3209    577 GASTTTGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTGSTTGGTTGTGVTTTGTTT 656

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1367 GADDTKDGDVDATTGGKTGIIGLREGEDNLTIDAGIHQAAGLASLGNFVWFDLNQDGIQDEGEPGVPGVSVTLYSSAGTK 1446
Cdd:COG3209    657 TRATGTTGTGTGVTAGLTTLATGGTTVGGGTGTTSTATTGATTGGTETGTTVTTLAGGTTTRLGTTTTGGGGGTTTDGTG 736

                          650       660
                   ....*....|....*....|....*..
gi 1000279891 1447 LATTTTNAAGLYQFTglTPGSYYVEFT 1473
Cdd:COG3209    737 TGGTTGTLTTTSTTT--TTTAGALTYT 761
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
 898-1384 3.57e-03

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 42.46  E-value: 3.57e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  898 TGMTGNYVLAISDSNMTVDAGIYFVQPVEASLGDYVWNDLNKDGIQDANELGISGVTVTLYDVNGLPVATTVTDATGHYL 977
Cdd:COG4625     41 GGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAG 120

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  978 FDKLTPGTYSVGFSQPIGYVFSPKNQGGNNATDSDVDPITGMTSPVTIVAGENNLTIDAGLYLQNANTASLGNFVWNDVN 1057
Cdd:COG4625    121 GGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGG 200

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1058 NNGIQDANEVGVPGVTVTLYANDGITVVSTTTTNEFGYYIFNNLTPDSYIVGFSGLPTGFSFVSNNQGGDDELDSNPDPV 1137
Cdd:COG4625    201 GGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGG 280

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1138 TGKSAVVTLKPGDKNMSVDAGIHNPTLPIGALGDFVWYDHNNNGIQDANENGVPGVTVTLYDDMNNILATTATDARGFYL 1217
Cdd:COG4625    281 GGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGG 360

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1218 FDNLAAGNYRVGFSNIPNGYVFTKVNEGSDLTDSDANQATGLTGVITLGSGEVNLTVDAGIKESIGLFGTATLGDRVWDD 1297
Cdd:COG4625    361 GGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGA 440

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1298 VNNNGIQDENEIGVSGVTVTLYAADGVTVIATQITDPL-GNYLFTGLNEGSYVVGFSNLPAGYTFSDANQGADDTKDGDV 1376
Cdd:COG4625    441 GGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLtGNNTYTGTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVVTG 520


                   ....*...
gi 1000279891 1377 DATTGGKT 1384
Cdd:COG4625    521 TATLNGGT 528
SpaA pfam17802
Prealbumin-like fold domain; This entry contains a prealbumin-like domain from a wide variety ...
 950-988 6.78e-03

Prealbumin-like fold domain; This entry contains a prealbumin-like domain from a wide variety of bacterial surface proteins. This entry corresponds to domain 1 and domain 3 of SpaA from Corynebacterium diphtheriae. Some members of this family contain an isopeptide bond.


Pssm-ID: 465513 [Multi-domain]  Cd Length: 72  Bit Score: 37.18  E-value: 6.78e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|...
gi 1000279891  950 ISGVTVTLYDVNGL----PVATTVTDATGHYLFDKLTPGTYSV 988
Cdd:pfam17802    6 LAGAEFTLYDADGTvdgkVVGTLTTDEDGKATFDGLPPGTYTL 48
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
 825-1503 7.60e-03

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 41.29  E-value: 7.60e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  825 DANEVGVAGITVSLYDNSNNLISATVTDAYGKYLFNKLAPGNYHVGFTLPTNYVFTSKDQGGNDELDSDPDPVTGMTGNY 904
Cdd:COG3210     48 AGGIASNAGTTASTSGGSGTAGGVGNTSASTGGIGAAAANTAGTLETGLTSNIGGGSVNGSNSTGNGTLTTTAASATTGN 127

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  905 VLAISDSNMTVDAGIYFVQPVEASLGDYVWNDLNKDGIQDANELGISGVTVTLYDVNGLPVATTVTDATGHYLFDKLTPG 984
Cdd:COG3210    128 NTGGTTTSSTNTVTTLGGTTTGNTVLSTSGAGNNTNTNNSSSGTNIGNSIPTTGGSLNVVAANPTGVTGVGGALINATAG 207

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891  985 TYSVGFSQPIGYVFSPKNQGGNNATDSDVDPITGMTSPVTIVAGENNLTIDAGLYLQNANTASLGNFVWNDVNNNGIQDA 1064
Cdd:COG3210    208 VLANAGGGTAGGVASANSTLTGGVVAAGTGAGVISTGGTDISSLSVAAGAGTGGAGGTGNAGNTTIGTTVTGTNATGSNT 287

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1065 NEVGVPGVTVTLYANDGITVVSTTTTNEFGyyifNNLTPDSYIVGFSGLPTGFSFVSNNQGGDDELDSNPDPVTGKSAVV 1144
Cdd:COG3210    288 AGASSGDTTTNGTSSVTGAGGTGVLGGGTA----AGITTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSGL 363

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1145 TLKPGDKNMSVDAGIHNPTLPIGALGDFVWYDHNNNGIQDANENGVPGVTVTLYDDMNNILATTATDARGFYLFDNLAAG 1224
Cdd:COG3210    364 TGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTG 443

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1225 NYRVGFSNIPNGYVFTKVNEGSDLTDSDANQATGLTGVITLGSGEVNLTVDAGIKESIGLFGTATLGDRVWDDVNNNGIQ 1304
Cdd:COG3210    444 GTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIATGLTGITAGGGG 523

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1305 DENEIGVSGVTVTLYAADGVTVIATQITDPLGNYLFTGLNEGSYVVGFSNlpaGYTFSDANQGADDTKDGDVDATTGGKT 1384
Cdd:COG3210    524 GGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANTLGVLAAT---GGTSNATTAGNSTSATGGTGTNSGGTV 600

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1000279891 1385 GIIGLREGEDNLTIDAGIHQAAGLASLGNFVWFDLNQDGIQDEGEPGVPGVSVTLYSSAGTKLATTTTNAAGLYQFTGLT 1464
Cdd:COG3210    601 LSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTS 680

                          650       660       670
                   ....*....|....*....|....*....|....*....
gi 1000279891 1465 PGSYYVEFTNLPAGYEFTFKGAGGDSALDSDADPNTGET 1503
Cdd:COG3210    681 GATGGTTGTTLNAATGGTLNNAGNTLTISTGSITVTGQI 719
SpaA pfam17802
Prealbumin-like fold domain; This entry contains a prealbumin-like domain from a wide variety ...
 1545-1586 7.93e-03

Prealbumin-like fold domain; This entry contains a prealbumin-like domain from a wide variety of bacterial surface proteins. This entry corresponds to domain 1 and domain 3 of SpaA from Corynebacterium diphtheriae. Some members of this family contain an isopeptide bond.


Pssm-ID: 465513 [Multi-domain]  Cd Length: 72  Bit Score: 36.79  E-value: 7.93e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 1000279891 1545 GENGIPGVTVILYASDGI---TPISSAITDANGFYTFINLEPGTY 1586
Cdd:pfam17802    2 TGKPLAGAEFTLYDADGTvdgKVVGTLTTDEDGKATFDGLPPGTY 46
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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