|
Name |
Accession |
Description |
Interval |
E-value |
| PRK09752 |
PRK09752 |
AIDA-I family autotransporter YfaL; |
1-1244 |
0e+00 |
|
AIDA-I family autotransporter YfaL;
Pssm-ID: 182059 [Multi-domain] Cd Length: 1250 Bit Score: 2187.91 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1 MRIIFLRKEYLSLLPSMIASLFSANGFAAAIDLCQGYDIKASCHASRQSLSGITQDWSVADGQWLVFSDMTNNASGGAVF 80
Cdd:PRK09752 1 MRIIFLRKEYLSLLPSMIASLFSANGVAAVIDSCQGYDIKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 81 LQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGVVDLRVTNA 160
Cdd:PRK09752 81 LQQGAEFTLSPENETGMTLFANNTVSGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 161 MFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIINNTAFTNNTAEGYG 240
Cdd:PRK09752 161 MFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIINNTAFTNNTAEGYG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 241 GAIYTNSATAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSTAASGFMYLGLSEVTFDIADGKTLVIGNTENDGAVD 320
Cdd:PRK09752 241 GAIYTNSATAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 321 SIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDKYQNQAELNVGS 400
Cdd:PRK09752 321 SIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDKYQNQAELNVGS 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 401 TQQTFVHSLTGFQNGTLNIDAGGNVTVNQGSFAGTIEGAGQLTIAQNGSYVLSGAQSMALTGDIVVDDGAVLSLEGDAAD 480
Cdd:PRK09752 401 TQQTFVHSLTGFQNGTLNIDAGGNVTVNQGSFAGTIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAAD 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 481 LTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGNDMHIGGDGKDGVYVVVDAGDGQ 560
Cdd:PRK09752 481 LRALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDDLHIGGDGKDGVYVVIDAGDGQ 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 561 VSLANNNSYLGTTQIASGMLEVSDNSQLGDTHYNRQVIFTDKQQESVMEITANVDTRSTTTEHGRDIEMRADGEVAVDAG 640
Cdd:PRK09752 561 VSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITADVDTRSTTTGHGRDIEMRADGEVAVDAG 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 641 VDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDI 720
Cdd:PRK09752 641 VDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADIIPYASSLWVGDGATFVTGADQDI 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 721 QSIDATSSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSDVTVNGNLTNTSG 800
Cdd:PRK09752 721 QSIDATSSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSDVTVNGNLTNTSG 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 801 AVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVLNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQ 880
Cdd:PRK09752 801 AVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVLNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQ 880
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 881 FQNNAKFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPLPPD----PDPDPTPDPDPTPD--PIPAYQPVLNANVGG 954
Cdd:PRK09752 881 FQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPDpdptPDPDPTPDPDPTPDpePTPAYQPVLNAKVGG 960
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 955 YLNNLRAANQAFMMERRDHAGGNGQTLNLRVIGGRYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGDDGEWMLGAVGGYSD 1034
Cdd:PRK09752 961 YLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGDDGEWMLGIVGGYSD 1040
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1035 NQGESRSNMTGTRADNQNHGYAVGLTSSWYQHGNQKQGAWLDSWLQYAWFNNDVSEQDDGTDHYHSSGIIASLEAGYQWL 1114
Cdd:PRK09752 1041 NQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFNNDVSEQEDGTDHYHSSGIIASLEAGYQWL 1120
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1115 PGRGVVIEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQTRLGLHSEWRTAVGVTPTLDLNYYHDPHATEIEEDGSTIS 1194
Cdd:PRK09752 1121 PGRGVVIEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTIS 1200
|
1210 1220 1230 1240 1250
....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1195 DDAVKRRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW 1244
Cdd:PRK09752 1201 DDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW 1250
|
|
| autotrans_barl |
TIGR01414 |
outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, ... |
806-1244 |
8.37e-90 |
|
outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Pssm-ID: 273608 [Multi-domain] Cd Length: 431 Bit Score: 296.99 E-value: 8.37e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 806 NGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVLNGNTAGNTTVVVNSITGIGEPTSTGIKVVDfaadpTQFQNNA 885
Cdd:TIGR01414 1 PGGAFNTLTVNGLYTGNGGFVMNTDLGGDNSQTDRLVVNGNASGTTGVVVNNIGGEGAQTGDGITLVT-----VNGGSDA 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 886 KFSLAGsGYVNMGAYDYTLV----EDNNDWYLRSQEvtpplPPDPDPDPTPDPDPTPDPIPAYQPVLNANVGGYLNNLRA 961
Cdd:TIGR01414 76 AFTLAN-GKVDAGAYTYTLYkngtEDNNNWYLTSSL-----PDLTPPGQQLSPTYRAEAGSYAANANAALFLAELDTLRQ 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 962 ANQAFMMERRDhaggNGQTLNLRVIGGRYHYTA-AGQLAQHEDTSTVQLSGDLFSGRWGdDGEWMLGAVGGYSDNQGESR 1040
Cdd:TIGR01414 150 RMGDLRSAARD----AGNGVWARIFGGDNHLDGdAGAAGYDQNTTGVQLGGDILLAGNA-DGDLHVGLMAGYAKADIKTR 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1041 SNMTGtrADNQNHGYAVGLTSSWYQHGnqkqGAWLDSWLQYAWFNNDVSEQDDG---TDHYHSSGIIASLEAGYQWLPG- 1116
Cdd:TIGR01414 225 SYKYG--GKGKVDGYGLGLYGTWLQDS----GAYVDGVLQYSRFRNDVSSTGSNgkvSGKYNSNGFTASLEAGYRYNLGg 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1117 RGVVIEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQTRLGLHSEWRTAVG----VTPTLDLNYYHDPH-ATEIEEDGS 1191
Cdd:TIGR01414 299 NGWYVEPQAQLSYFGVSGDDYKESNGTRVLGGGGDSLQGRLGLRVGYQFDLGtgraVKPYLKANVLHEFKgGTGVRVNGV 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1014500893 1192 TISDDAVKRRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW 1244
Cdd:TIGR01414 379 TIRNDFSGTRAEYGVGVNAKIKDNLSLYADVDYQKGGKKYTDNQGNLGVRYSF 431
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
410-1244 |
1.58e-79 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 280.29 E-value: 1.58e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 410 TGFQNGTLNIDAGGNVTVNQGSFAGTIEGAGQLTIAQNGSYVLSGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQ 489
Cdd:COG3468 1 TASGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 490 SIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGNDMHIGGDGKDGVYVVVDAGDGQVSLANNNSY 569
Cdd:COG3468 81 SGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 570 LGTTQIASGMLEVSDNSQLGDTHYNRQVIFTDKQQESVMEITANVDTRSTTTEHGRDIEMRADGEVAVDAGVDTQWGALM 649
Cdd:COG3468 161 TGSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 650 ADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDATSSG 729
Cdd:COG3468 241 GGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 730 TIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSDVTVNGNLTNTSGAVSLQNGV- 808
Cdd:COG3468 321 NAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGt 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 809 ------------------AGDTLTVNGDYTG-GGTLLLDSELNGDDSVSDQLVLNGNTAGNTTVVVNSITGIGEPTSTGI 869
Cdd:COG3468 401 gnnggggvgggggggltlTGGTLTVNGNYTGnNGTLVLNTVLGDDNSPTDRLVVNGNTSGTTGVRVNNAGGLGAQTVNGI 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 870 KVVDfaadpTQFQNNAKFSLagSGYVNMGAYDYTLV-----EDNNDWYLRSQEVTPPLPpdpdpdptpdpdptpdpipay 944
Cdd:COG3468 481 EVVE-----VNGASDGAFTL--GGRVVAGAYEYTLYqggsgGDDGNWYLRSTLTPPDPP--------------------- 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 945 QPVLNANVGGYLNNLRAANQAFMMER----------RDHAGGNGQTLNLRVIGGRYHY-TAAGQLAQHEDTSTVQLSGDL 1013
Cdd:COG3468 533 TPVYRPEVPSYLANPAAANGLFELGTlhdrlgerryTDTGESDNSGAWLRVEGGHNRSrDSSGQLDYDSNRYGLQLGGDL 612
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1014 FSGRwGDDGEWMLGAVGGYSDNQGESRSNMTGTrADNQNHGYAVGLTSSWYQHgnqkQGAWLDSWLQYAWFNNDVSEQDD 1093
Cdd:COG3468 613 LQWE-DGGGRLHVGVMAGYGNGDSDVRSRATGT-GKGDVDGYSLGLYGTWYGN----NGFYVDGVLQYSWFDNDVSSDDL 686
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1094 G--TDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQTRLGLH----SEWRTAV 1167
Cdd:COG3468 687 GgvTGSYDGNGYSASLEAGYPFKLGEGWSLEPQAQLIYQGVDFDDFTDSNGTRVSGDDGDSLQGRLGLRlgyeFHWDDGR 766
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1014500893 1168 GVTPTLDLNYYHDPHA-TEIEEDGSTISDDAVKRRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW 1244
Cdd:COG3468 767 ALQPYLEANWLHEFLGdNSVTVNGVSFSQDGSGTWGELGLGVTGQLNKNLSLYGDVGYQTGLDGYDSSDTSGNLGVRY 844
|
|
| auto_AIDA-I |
NF033176 |
autotransporter adhesin AIDA-I; |
747-1227 |
2.51e-35 |
|
autotransporter adhesin AIDA-I;
Pssm-ID: 380183 [Multi-domain] Cd Length: 1287 Bit Score: 146.73 E-value: 2.51e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 747 SVALNASLFNGDGTLVNATDGVTLTGELNT-------------NLETDS-----LTYLSDVTVNGNLTNTSGAV-SLQNG 807
Cdd:NF033176 767 SAVVNADMAVSQNAYINISDQATINGSVNNkgsvvinnsiingNITNDAdlsfgTAKLLSATVNGSLVNNKNIIlNPTKE 846
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 808 VAGDTLTVNgDYTG--GGTLLLDSELNGDDSVSDQLVLNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADptqfqNNA 885
Cdd:NF033176 847 SAGNTLTVS-NYTGtpGSVISLGGVLEGDNSLTDRLVVKGNTSGQSDIVYVNEGGSGGQTIEGINIISVEGN-----SDA 920
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 886 KFSLAGSgyVNMGAYDYTLVE------DNNDWYLRSQevtpplppdpdpdptpdpdPTPDPIPAYQPvlnaNVGGYLNNL 959
Cdd:NF033176 921 EFSLKNR--VVAGAYDYTLQKgnvsgtDKKGWYLTSH-------------------LPTSDTRQYRP----ENGSYATNM 975
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 960 RAANQAFMM---ERRDHAGGNGQT------LNLRVIGGRyhytAAGQLAQHEDTSTV-----QLSGDLFSGRWGDDGEWM 1025
Cdd:NF033176 976 ALANSLFLMdlnERKQFSAVNDNTqpesasVWMKITGGR----TSGKLSDGQNKTTTnqfinQLGGDIYKYHAEKLGDFT 1051
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1026 LGAVGGYSDNQGESRSNMTGTRADNQNHGYAVGLTSSWYQHGNQKQGAWLDSWLQYAWFNNDVSEQDDGTDHYHSSGIIA 1105
Cdd:NF033176 1052 LGIMGGYANAKGKTINHTSKKGARNTLDGYSAGLYGTWYQNGANATGLFAETWMQYNWFNASVKGDGLEEEKYNLNGLTA 1131
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1106 SLEAGYQ-----WLPGRGVV----IEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQTRLGLHSEWR--------TAVG 1168
Cdd:NF033176 1132 SVGGGYNlnvhtWTSPEGIKgefwLQPHLQAVWMGVTPDTHQEDNGTVVQGTGKNNLQTKAGIRASWKvkssldkdTGRE 1211
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 1014500893 1169 VTPTLDLNYYHDPHATEIEEDGSTISDDAVKRRGEIKVGVTGNISQRVSLRGSVAWQKG 1227
Cdd:NF033176 1212 FRPYIEANWIHNTHEFGVKMSGDNQLLSGSRNQGEIKTGIEGVITQNLSVNGGVAYQAG 1270
|
|
| PL2_Passenger_AT |
cd01344 |
Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 2, of ... |
729-916 |
4.72e-33 |
|
Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 2, of autotransporter proteins of the type V secretion system of Gram-negative bacteria. This subgroup includes the passenger domains of the nonprotease autotransporters, Ag43, AIDA-1 and IcsA, as well as, the less characterized ShdA, MisL, and BapA autotransporters.
Pssm-ID: 238654 [Multi-domain] Cd Length: 188 Bit Score: 126.65 E-value: 4.72e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 729 GTIDISDGTVL--RLTGQDTSVALNASLFnGDGTLVNATDG-VTLTGELNTNLETDSltylsdVTVNGNLTNtSGAVSLQ 805
Cdd:cd01344 1 GTITGNGGWKLggDLTLGGGALTLTTSLT-LTGTLLTGGAGtLTLDSTSTWNITGTS------TLNVGNLTN-AGTIDLG 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 806 NG-VAGDTLTVNGDYTG-GGTLLLDSELNGDDSVSDQLVLNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAAdptqFQN 883
Cdd:cd01344 73 NGsPAGGTLTITGNYTGnGGTLRLNTVLGDDDSPTDRLVIDGDASGTTRVAVNNAGGSGATTGNGIEVVEVGG----TSS 148
|
170 180 190
....*....|....*....|....*....|....*...
gi 1014500893 884 NAKFSLAgsGYVNMGAYDYTLV-----EDNNDWYLRSQ 916
Cdd:cd01344 149 NGAFSLA--GRVVAGAYEYRLYrggvsGNDGNWYLRSE 184
|
|
| Autotransporter |
pfam03797 |
Autotransporter beta-domain; Secretion of protein products occurs by a number of different ... |
983-1222 |
8.91e-25 |
|
Autotransporter beta-domain; Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type V pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C terminus of the proteins it occurs in. The N terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different protease is used and in some cases no cleavage occurs.
Pssm-ID: 461054 [Multi-domain] Cd Length: 255 Bit Score: 104.77 E-value: 8.91e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 983 LRVIGGRYHY-TAAGQLAQHEDTSTVQLSGDLFSGrwgddGEWMLGAVGGYSDnqgeSRSNMTGTRADNQNHGYAVGLTS 1061
Cdd:pfam03797 3 ARGFGGRGKQdGDGGAAGYDADTGGLQVGADYRLG-----DNLRLGVAFGYSR----SDADVDGRGGSGDSDSYSLGLYG 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1062 SWYQHGnqkqGAWLDSWLQYAWFNNDVS-------EQDDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQ 1134
Cdd:pfam03797 74 TYYGDG----GWYLDGGLGYGWHDNDTRrsvdlggFSETAKGDYDGNGFGASLEAGYRFALGGGWTLEPFAGLAYVRLRL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1135 DDFTAANHA---RVSQSQGDDIQTRLGLHSEWRTAVG---VTPTLDLNYYHDPHATEIEEDGS-----------TISDDA 1197
Cdd:pfam03797 150 DGFTESGGAaalSVDSQSYDSLTGRLGLRLSYTFDLGggtLTPYARLGWRHEFGDDDPVTTAAfaglsgagsftVAGADL 229
|
250 260
....*....|....*....|....*
gi 1014500893 1198 VKRRGEIKVGVTGNISQRVSLRGSV 1222
Cdd:pfam03797 230 ARDSLELGAGLSAQLSDNLSLYANY 254
|
|
| Autotransporter |
smart00869 |
Autotransporter beta-domain; Secretion of protein products occurs by a number of different ... |
983-1233 |
8.89e-24 |
|
Autotransporter beta-domain; Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type IV pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C-terminus of the proteins it occurs in. The N-terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different peptidase is used and in some cases no cleavage occurs.
Pssm-ID: 214872 [Multi-domain] Cd Length: 268 Bit Score: 102.26 E-value: 8.89e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 983 LRVIGGRYHYTAAGQLAQHE---DTSTVQLSGDLfsgRWGDDGEWMLGAVGGYSDNQGESRSNMTGTRADNqnHGYAVGL 1059
Cdd:smart00869 1 GRGLGGFLRQDSSGSGGSAGfdyDSYGLQLGADY---RLSDNGNLSLGFAAGYGNSKVDFSGNKGSGKGDV--DSYGLGL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1060 TSSWYQHgnqkQGAWLDSWLQYAWFNNDVS------EQDDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQ 1133
Cdd:smart00869 76 YAGYSLG----NGLYLDAQLGYGRSDNDTKrkvtlgGAGRAKGSYDGTGYGASLEAGYRFYLGGGLTLTPFAGLAYSRVR 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1134 QDDFT----AANHARVSQSQGDDIQTRLGLHSEWRTAVG----VTPTLDLNYYHD---------PHATEIEEDGSTISDD 1196
Cdd:smart00869 152 QDGFTesggGAFGLSVDSQSLDSLSLPLGLRLEYRLALGdgatLTPYLRLAYVHDfyddnpvvtASLLGSGASFTTSGTD 231
|
250 260 270
....*....|....*....|....*....|....*..
gi 1014500893 1197 AVKRRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQ 1233
Cdd:smart00869 232 LDRNAAELGLGLSAKLSNGLSLSLNYDGEFGGSSRSH 268
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK09752 |
PRK09752 |
AIDA-I family autotransporter YfaL; |
1-1244 |
0e+00 |
|
AIDA-I family autotransporter YfaL;
Pssm-ID: 182059 [Multi-domain] Cd Length: 1250 Bit Score: 2187.91 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1 MRIIFLRKEYLSLLPSMIASLFSANGFAAAIDLCQGYDIKASCHASRQSLSGITQDWSVADGQWLVFSDMTNNASGGAVF 80
Cdd:PRK09752 1 MRIIFLRKEYLSLLPSMIASLFSANGVAAVIDSCQGYDIKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 81 LQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGVVDLRVTNA 160
Cdd:PRK09752 81 LQQGAEFTLSPENETGMTLFANNTVSGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 161 MFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIINNTAFTNNTAEGYG 240
Cdd:PRK09752 161 MFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIINNTAFTNNTAEGYG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 241 GAIYTNSATAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSTAASGFMYLGLSEVTFDIADGKTLVIGNTENDGAVD 320
Cdd:PRK09752 241 GAIYTNSATAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 321 SIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDKYQNQAELNVGS 400
Cdd:PRK09752 321 SIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDKYQNQAELNVGS 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 401 TQQTFVHSLTGFQNGTLNIDAGGNVTVNQGSFAGTIEGAGQLTIAQNGSYVLSGAQSMALTGDIVVDDGAVLSLEGDAAD 480
Cdd:PRK09752 401 TQQTFVHSLTGFQNGTLNIDAGGNVTVNQGSFAGTIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAAD 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 481 LTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGNDMHIGGDGKDGVYVVVDAGDGQ 560
Cdd:PRK09752 481 LRALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDDLHIGGDGKDGVYVVIDAGDGQ 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 561 VSLANNNSYLGTTQIASGMLEVSDNSQLGDTHYNRQVIFTDKQQESVMEITANVDTRSTTTEHGRDIEMRADGEVAVDAG 640
Cdd:PRK09752 561 VSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITADVDTRSTTTGHGRDIEMRADGEVAVDAG 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 641 VDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDI 720
Cdd:PRK09752 641 VDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADIIPYASSLWVGDGATFVTGADQDI 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 721 QSIDATSSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSDVTVNGNLTNTSG 800
Cdd:PRK09752 721 QSIDATSSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSDVTVNGNLTNTSG 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 801 AVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVLNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQ 880
Cdd:PRK09752 801 AVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVLNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQ 880
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 881 FQNNAKFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPLPPD----PDPDPTPDPDPTPD--PIPAYQPVLNANVGG 954
Cdd:PRK09752 881 FQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPDpdptPDPDPTPDPDPTPDpePTPAYQPVLNAKVGG 960
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 955 YLNNLRAANQAFMMERRDHAGGNGQTLNLRVIGGRYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGDDGEWMLGAVGGYSD 1034
Cdd:PRK09752 961 YLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGDDGEWMLGIVGGYSD 1040
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1035 NQGESRSNMTGTRADNQNHGYAVGLTSSWYQHGNQKQGAWLDSWLQYAWFNNDVSEQDDGTDHYHSSGIIASLEAGYQWL 1114
Cdd:PRK09752 1041 NQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFNNDVSEQEDGTDHYHSSGIIASLEAGYQWL 1120
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1115 PGRGVVIEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQTRLGLHSEWRTAVGVTPTLDLNYYHDPHATEIEEDGSTIS 1194
Cdd:PRK09752 1121 PGRGVVIEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTIS 1200
|
1210 1220 1230 1240 1250
....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1195 DDAVKRRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW 1244
Cdd:PRK09752 1201 DDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW 1250
|
|
| autotrans_barl |
TIGR01414 |
outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, ... |
806-1244 |
8.37e-90 |
|
outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Pssm-ID: 273608 [Multi-domain] Cd Length: 431 Bit Score: 296.99 E-value: 8.37e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 806 NGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVLNGNTAGNTTVVVNSITGIGEPTSTGIKVVDfaadpTQFQNNA 885
Cdd:TIGR01414 1 PGGAFNTLTVNGLYTGNGGFVMNTDLGGDNSQTDRLVVNGNASGTTGVVVNNIGGEGAQTGDGITLVT-----VNGGSDA 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 886 KFSLAGsGYVNMGAYDYTLV----EDNNDWYLRSQEvtpplPPDPDPDPTPDPDPTPDPIPAYQPVLNANVGGYLNNLRA 961
Cdd:TIGR01414 76 AFTLAN-GKVDAGAYTYTLYkngtEDNNNWYLTSSL-----PDLTPPGQQLSPTYRAEAGSYAANANAALFLAELDTLRQ 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 962 ANQAFMMERRDhaggNGQTLNLRVIGGRYHYTA-AGQLAQHEDTSTVQLSGDLFSGRWGdDGEWMLGAVGGYSDNQGESR 1040
Cdd:TIGR01414 150 RMGDLRSAARD----AGNGVWARIFGGDNHLDGdAGAAGYDQNTTGVQLGGDILLAGNA-DGDLHVGLMAGYAKADIKTR 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1041 SNMTGtrADNQNHGYAVGLTSSWYQHGnqkqGAWLDSWLQYAWFNNDVSEQDDG---TDHYHSSGIIASLEAGYQWLPG- 1116
Cdd:TIGR01414 225 SYKYG--GKGKVDGYGLGLYGTWLQDS----GAYVDGVLQYSRFRNDVSSTGSNgkvSGKYNSNGFTASLEAGYRYNLGg 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1117 RGVVIEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQTRLGLHSEWRTAVG----VTPTLDLNYYHDPH-ATEIEEDGS 1191
Cdd:TIGR01414 299 NGWYVEPQAQLSYFGVSGDDYKESNGTRVLGGGGDSLQGRLGLRVGYQFDLGtgraVKPYLKANVLHEFKgGTGVRVNGV 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1014500893 1192 TISDDAVKRRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW 1244
Cdd:TIGR01414 379 TIRNDFSGTRAEYGVGVNAKIKDNLSLYADVDYQKGGKKYTDNQGNLGVRYSF 431
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
410-1244 |
1.58e-79 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 280.29 E-value: 1.58e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 410 TGFQNGTLNIDAGGNVTVNQGSFAGTIEGAGQLTIAQNGSYVLSGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQ 489
Cdd:COG3468 1 TASGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 490 SIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGNDMHIGGDGKDGVYVVVDAGDGQVSLANNNSY 569
Cdd:COG3468 81 SGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 570 LGTTQIASGMLEVSDNSQLGDTHYNRQVIFTDKQQESVMEITANVDTRSTTTEHGRDIEMRADGEVAVDAGVDTQWGALM 649
Cdd:COG3468 161 TGSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 650 ADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDATSSG 729
Cdd:COG3468 241 GGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 730 TIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSDVTVNGNLTNTSGAVSLQNGV- 808
Cdd:COG3468 321 NAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGt 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 809 ------------------AGDTLTVNGDYTG-GGTLLLDSELNGDDSVSDQLVLNGNTAGNTTVVVNSITGIGEPTSTGI 869
Cdd:COG3468 401 gnnggggvgggggggltlTGGTLTVNGNYTGnNGTLVLNTVLGDDNSPTDRLVVNGNTSGTTGVRVNNAGGLGAQTVNGI 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 870 KVVDfaadpTQFQNNAKFSLagSGYVNMGAYDYTLV-----EDNNDWYLRSQEVTPPLPpdpdpdptpdpdptpdpipay 944
Cdd:COG3468 481 EVVE-----VNGASDGAFTL--GGRVVAGAYEYTLYqggsgGDDGNWYLRSTLTPPDPP--------------------- 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 945 QPVLNANVGGYLNNLRAANQAFMMER----------RDHAGGNGQTLNLRVIGGRYHY-TAAGQLAQHEDTSTVQLSGDL 1013
Cdd:COG3468 533 TPVYRPEVPSYLANPAAANGLFELGTlhdrlgerryTDTGESDNSGAWLRVEGGHNRSrDSSGQLDYDSNRYGLQLGGDL 612
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1014 FSGRwGDDGEWMLGAVGGYSDNQGESRSNMTGTrADNQNHGYAVGLTSSWYQHgnqkQGAWLDSWLQYAWFNNDVSEQDD 1093
Cdd:COG3468 613 LQWE-DGGGRLHVGVMAGYGNGDSDVRSRATGT-GKGDVDGYSLGLYGTWYGN----NGFYVDGVLQYSWFDNDVSSDDL 686
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1094 G--TDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQTRLGLH----SEWRTAV 1167
Cdd:COG3468 687 GgvTGSYDGNGYSASLEAGYPFKLGEGWSLEPQAQLIYQGVDFDDFTDSNGTRVSGDDGDSLQGRLGLRlgyeFHWDDGR 766
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1014500893 1168 GVTPTLDLNYYHDPHA-TEIEEDGSTISDDAVKRRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW 1244
Cdd:COG3468 767 ALQPYLEANWLHEFLGdNSVTVNGVSFSQDGSGTWGELGLGVTGQLNKNLSLYGDVGYQTGLDGYDSSDTSGNLGVRY 844
|
|
| PRK15313 |
PRK15313 |
intestinal colonization autotransporter adhesin MisL; |
709-1240 |
2.23e-52 |
|
intestinal colonization autotransporter adhesin MisL;
Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 200.41 E-value: 2.23e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 709 GATFVTgaDQDIQSIDATS-SGTidisdgtvlrLTGQDTSVALNA---SLFNGDGTLVNATDGvtlTGELNTNLETDSLT 784
Cdd:PRK15313 365 GGRFVI--DGDIRAAGATAaSGT----------LPQQNSTIKLNMtdnSRWDGASYITSATAG---TGVISVQMSDATWN 429
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 785 YLSDVTVNgNLTNTSGAV---SLQNGVAGDTLTVNGDYTG-GGTLLLDSELNGDDSVSDQLVLNGNTAGNTTVVVNSITG 860
Cdd:PRK15313 430 MTSSSTLT-DLTLNSGATinfSHEDGEPWQTLTINEDYVGnGGKLVFNTVLNDDDSETDRLQVLGNTSGNTFVAVNNIGG 508
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 861 IGEPTSTGIKVVDFAADptqfqNNAKFSLAGSgyVNMGAYDYTLVEDNNDWYLRS------------------------- 915
Cdd:PRK15313 509 AGAQTIEGIEIVNVAGN-----SNGTFEKASR--IVAGAYDYNVVQKGKNWYLTSyiepdepiipdpvdpvipdpvipdp 581
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 916 ---------------------QEVTPPLPPDPDPDPTPDPDPTPDPIPAYQPVLNANVGGYLNNLRAANQAFMMERRDHA 974
Cdd:PRK15313 582 vdpdpvdpvipdpvipdpvdpDPVDPEPVDPVIPDPTIPDIGQSDTPPITEHQFRPEVGSYLANNYAANTLFMTRLHDRL 661
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 975 GGNGQT-----------LNLRVIGGRYHYT-AAGQLAQHEDTSTVQLSGDLfsGRWGDDG--EWMLGAVGGYSDNQGESR 1040
Cdd:PRK15313 662 GETQYTdmltgekkvtsLWMRNVGAHTRFNdGSGQLKTRINSYVLQLGGDL--AQWSTDGldRWHIGAMAGYANSQNRTL 739
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1041 SNMTGTRADNQNHGYAVGLTSSWYQHGNQKQGAWLDSWLQYAWFNNDVSEQDDGTDHYHSSGIIASLEAGYQWLPG---- 1116
Cdd:PRK15313 740 SSVSDYHSRGQVTGYSVGLYGTWYANNIDRSGAYVDTWMLYNWFDNKVMGQDQAAEKYKSKGITASVEAGYSFRLGesah 819
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1117 RGVVIEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQTRLGLHS--------EWRTAVGVTPTLDLNYYHDPHATEIEE 1188
Cdd:PRK15313 820 QSYWLQPKAQVVWMGVQADDNREANGTLVKDDTAGNLLTRMGVKAyinghnaiDDNKSREFQPFVEANWIHNTQPASVKM 899
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|..
gi 1014500893 1189 DGSTISDDAVKRRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSM 1240
Cdd:PRK15313 900 DDVSSDMRGTKNIGELKVGIEGQITPRLNVWGNVAQQVGDQGYSNTQGLLGV 951
|
|
| PRK14849 |
PRK14849 |
autotransporter barrel domain-containing lipoprotein; |
725-1244 |
7.08e-49 |
|
autotransporter barrel domain-containing lipoprotein;
Pssm-ID: 184851 [Multi-domain] Cd Length: 1806 Bit Score: 191.10 E-value: 7.08e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 725 ATSSGTIDISDGTVLrlTGQDTSVALNASLFNGDGTLVnATDGVTLTGELNtnLETDSLTYLSDVTVNGNLTNtSGAVSL 804
Cdd:PRK14849 1268 AAYQGTTDIVGGEIA--FGSDSAINMASQHINIHNSGV-MSGNVTTAGDVN--VMPGGTLRVAKTTIGGNLEN-GGTVQM 1341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 805 --QNGVAGDTLTVNGDYTGG-GTLLLDSELNGDDSVSDQLVLNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTqf 881
Cdd:PRK14849 1342 nsEGGKPGNVLTVNGNYTGNnGLMTFNATLGGDNSPTDKMNVKGDTQGNTRVRVDNIGGVGAQTVNGIELIEVGGNSA-- 1419
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 882 qnnAKFSLAgSGYVNMGAYDYTLVE----DNNDWYLRSQEvTPPLPPDPDPDPTPDPDPTPDPIPAYQPvlnaNVGGYLN 957
Cdd:PRK14849 1420 ---GNFALT-TGTVEAGAYVYTLAKgkgnDEKNWYLTSKW-DGVTPPDTPDPINNPPVVDPEGPSVYRP----EAGSYIS 1490
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 958 NLRAANQAFMMERRD-----------HAGGNGQTLNLRVIGGRYHYTAA-GQLAQHEDTSTVQLSGDLFSGRWGDDGEWM 1025
Cdd:PRK14849 1491 NIAAANSLFSHRLHDrlgepqyidslHSQGSASSMWMRHVGGHERSRAGdGQLNTQANRYVLQLGGDLAQWSSNAQDRWH 1570
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1026 LGAVGGYSDNQGESRSNMTGTRADNQNHGYAVGLTSSWYQHGNQKQGAWLDSWLQYAWFNNDVSEQDDGTDHYHSSGIIA 1105
Cdd:PRK14849 1571 LGVMAGYANQHSNTQSNRVGYKSDGRISGYSAGLYATWYQNDANKTGAYVDSWALYNWFDNSVSSDNRSADDYDSRGVTA 1650
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1106 SLEAGYQWLPG---------RGVVIEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQTRLG----LHSEWRTAVG---- 1168
Cdd:PRK14849 1651 SVEGGYTFEAGtfsgsegtlNTWYVQPQAQITWMGVKDSDHTRKDGTRIETEGDGNVQTRLGvktyLNSHHQRDDGkqre 1730
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1014500893 1169 VTPTLDLNYYHDPHATEIEEDGSTISDDAVKRRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW 1244
Cdd:PRK14849 1731 FQPYIEANWINNSKVYAVKMNGQTVGREGARNLGEVRTGVEAKVNNNLSLWGNVGVQLGDKGYSDTQGMLGVKYSW 1806
|
|
| PRK15319 |
PRK15319 |
fibronectin-binding autotransporter adhesin ShdA; |
631-1244 |
3.98e-40 |
|
fibronectin-binding autotransporter adhesin ShdA;
Pssm-ID: 185219 [Multi-domain] Cd Length: 2039 Bit Score: 162.95 E-value: 3.98e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 631 ADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLkgdvadilpyasslWV-GDG 709
Cdd:PRK15319 1428 AHGTFTLGAGDSFEVTSVLGDKTGNGDWDGKSLTKLGAGKLTLSGANTYTGDTNVQEGTL--------------WLsGDG 1493
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 710 ATFVTGADQdiqSIDATSSGTIDISDGTvlrltgqdtsvALNASLFNgDGTLVNAtdgvtltgelntnletDSLTYLSDV 789
Cdd:PRK15319 1494 SIGEMGSQQ---AVNVASGATFGGSNGT-----------TVNGKVTN-EGTLVFG----------------DSEETGAIF 1542
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 790 TVNGNLTN----TSGAVSlqnGVAGDTLTVNGDYTG-GGTLLLDSELNGDDSVSDQLVLNGNTAGNTTVVVNSItGIGEP 864
Cdd:PRK15319 1543 TLNGDLINmgtmTSGSSS---STPGNTLYVDGNYTGnGGSLYLNTVLGDDDSATDKLVITGDASGTTDLYINGI-GDGAQ 1618
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 865 TSTGIKVVDFAADPTqfqnNAKFSLAGSgyVNMGAYDYTLV--EDNNDWYLRSQEVT----------------------- 919
Cdd:PRK15319 1619 TTNGIEVVDVGGVST----SDAFELKNE--VNAGLYTYRLYwnESDNDWYLASKAQSddddsggddtpsdggddggnvtp 1692
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 920 ------PPLPPDPDPDPTPDPDPTPDPIPAYQPVLNANVGGYLNNLRAANQAFMMERRDHAGGNGQTLN----LRVIGGR 989
Cdd:PRK15319 1693 pddggdGGNVTPPDDGGDGGDVTPPDHGGDVAPQYRADIGAYMGNQWMARNLQMQTLYDREGSQYRNADgsvwARFKAGK 1772
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 990 YHYTA-AGQLAQHEDTSTVQLSGDLFSgrWGDDGE-WMLGAVGGY----SDNQGESRSNMTGTRADNQNHGYAVGLTSSW 1063
Cdd:PRK15319 1773 AESEAvSGNIDMDSNYSQFQLGGDILA--WGNGQQsVTVGVMASYinadTDSTGNRGADGSQFTSSGNVDGYNLGVYATW 1850
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1064 YQHGNQKQGAWLDSWLQYAWFNNDVSEQDDGTDHYHSSGIIASLEAGYQW----LPGRGVVIEPQAQVIYQGVQQDDFTA 1139
Cdd:PRK15319 1851 FADAQTHSGAYVDSWYQYGFYNNSVESGDAGSESYDSTANAVSLETGYRYdialSNGNTVSLTPQAQVVWQNYSADSVKD 1930
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1140 ANHARVSQSQGDDIQTRLGLHSEWRTAVG----VTPTLDLNYYHDPHATEIEEDGSTISDDAVKRRGEIKVGVTGNISQR 1215
Cdd:PRK15319 1931 NYGTRIDGQDGDSWTTRLGLRVDGKLYKGsrtvIQPFAEANWLHTSDDVSVSFDDATVKQDLPANRAELKVGLQADIDKQ 2010
|
650 660
....*....|....*....|....*....
gi 1014500893 1216 VSLRGSVAWQKGSDDFAQTAGFLSMTVKW 1244
Cdd:PRK15319 2011 WSVRAQVAGQTGSNDFGDLNGSLNLRYNW 2039
|
|
| auto_AIDA-I |
NF033176 |
autotransporter adhesin AIDA-I; |
747-1227 |
2.51e-35 |
|
autotransporter adhesin AIDA-I;
Pssm-ID: 380183 [Multi-domain] Cd Length: 1287 Bit Score: 146.73 E-value: 2.51e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 747 SVALNASLFNGDGTLVNATDGVTLTGELNT-------------NLETDS-----LTYLSDVTVNGNLTNTSGAV-SLQNG 807
Cdd:NF033176 767 SAVVNADMAVSQNAYINISDQATINGSVNNkgsvvinnsiingNITNDAdlsfgTAKLLSATVNGSLVNNKNIIlNPTKE 846
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 808 VAGDTLTVNgDYTG--GGTLLLDSELNGDDSVSDQLVLNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADptqfqNNA 885
Cdd:NF033176 847 SAGNTLTVS-NYTGtpGSVISLGGVLEGDNSLTDRLVVKGNTSGQSDIVYVNEGGSGGQTIEGINIISVEGN-----SDA 920
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 886 KFSLAGSgyVNMGAYDYTLVE------DNNDWYLRSQevtpplppdpdpdptpdpdPTPDPIPAYQPvlnaNVGGYLNNL 959
Cdd:NF033176 921 EFSLKNR--VVAGAYDYTLQKgnvsgtDKKGWYLTSH-------------------LPTSDTRQYRP----ENGSYATNM 975
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 960 RAANQAFMM---ERRDHAGGNGQT------LNLRVIGGRyhytAAGQLAQHEDTSTV-----QLSGDLFSGRWGDDGEWM 1025
Cdd:NF033176 976 ALANSLFLMdlnERKQFSAVNDNTqpesasVWMKITGGR----TSGKLSDGQNKTTTnqfinQLGGDIYKYHAEKLGDFT 1051
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1026 LGAVGGYSDNQGESRSNMTGTRADNQNHGYAVGLTSSWYQHGNQKQGAWLDSWLQYAWFNNDVSEQDDGTDHYHSSGIIA 1105
Cdd:NF033176 1052 LGIMGGYANAKGKTINHTSKKGARNTLDGYSAGLYGTWYQNGANATGLFAETWMQYNWFNASVKGDGLEEEKYNLNGLTA 1131
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1106 SLEAGYQ-----WLPGRGVV----IEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQTRLGLHSEWR--------TAVG 1168
Cdd:NF033176 1132 SVGGGYNlnvhtWTSPEGIKgefwLQPHLQAVWMGVTPDTHQEDNGTVVQGTGKNNLQTKAGIRASWKvkssldkdTGRE 1211
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 1014500893 1169 VTPTLDLNYYHDPHATEIEEDGSTISDDAVKRRGEIKVGVTGNISQRVSLRGSVAWQKG 1227
Cdd:NF033176 1212 FRPYIEANWIHNTHEFGVKMSGDNQLLSGSRNQGEIKTGIEGVITQNLSVNGGVAYQAG 1270
|
|
| PL2_Passenger_AT |
cd01344 |
Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 2, of ... |
729-916 |
4.72e-33 |
|
Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 2, of autotransporter proteins of the type V secretion system of Gram-negative bacteria. This subgroup includes the passenger domains of the nonprotease autotransporters, Ag43, AIDA-1 and IcsA, as well as, the less characterized ShdA, MisL, and BapA autotransporters.
Pssm-ID: 238654 [Multi-domain] Cd Length: 188 Bit Score: 126.65 E-value: 4.72e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 729 GTIDISDGTVL--RLTGQDTSVALNASLFnGDGTLVNATDG-VTLTGELNTNLETDSltylsdVTVNGNLTNtSGAVSLQ 805
Cdd:cd01344 1 GTITGNGGWKLggDLTLGGGALTLTTSLT-LTGTLLTGGAGtLTLDSTSTWNITGTS------TLNVGNLTN-AGTIDLG 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 806 NG-VAGDTLTVNGDYTG-GGTLLLDSELNGDDSVSDQLVLNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAAdptqFQN 883
Cdd:cd01344 73 NGsPAGGTLTITGNYTGnGGTLRLNTVLGDDDSPTDRLVIDGDASGTTRVAVNNAGGSGATTGNGIEVVEVGG----TSS 148
|
170 180 190
....*....|....*....|....*....|....*...
gi 1014500893 884 NAKFSLAgsGYVNMGAYDYTLV-----EDNNDWYLRSQ 916
Cdd:cd01344 149 NGAFSLA--GRVVAGAYEYRLYrggvsGNDGNWYLRSE 184
|
|
| PL_Passenger_AT |
cd00253 |
Pertactin-like passenger domains (virulence factors) of autotransporter proteins of the type V ... |
732-918 |
7.01e-29 |
|
Pertactin-like passenger domains (virulence factors) of autotransporter proteins of the type V secretion system. Autotransporters are proteins used by Gram-negative bacteria to transport proteins across their outer membranes. The C-terminal (beta) domain of autotransporters forms a pore in the outer membrane through which the N-terminal passenger domain is transported. Following transport, the passenger domain is generally cleaved by an outer membrane protease with the passenger domain either remaining in contact with the surface via a noncovalent interaction with the beta domain or cleaved to release a soluble protein. These proteins are highly diverse and perform a variety of functions that promote virulence, including catalyzing proteolysis, serving as an adhesin, mediating actin-promoted motility, or serving as a cytotoxin. Proteins in this family share similarity in the C-terminal region of the passenger domain as seen in the pertactin structure P.69, a Bordetella pertussis agglutinogen responsible for human pertussis. The P.69 protein consists of a 16-stranded parallel beta-helix with a V-shaped cross-section, and is one of the largest beta-helix known to date.
Pssm-ID: 238156 [Multi-domain] Cd Length: 186 Bit Score: 114.38 E-value: 7.01e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 732 DISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNletDSLTYLSDVTVNGNLTNTSGAVSLQNG-VAG 810
Cdd:cd00253 2 TLSGNATINGGGDLTLGGGGALTLTGNSVWLGTLQAGGGTVSLNSN---SLWTLTGDSTVNGNLTNSGGTVDFGSAsGAF 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 811 DTLTVNGDYTGG-GTLLLDSELNGDDSVSDQLVLNGNTAGNTTVVVNSITGIGEPTSTGIKVVDfaadpTQFQNNAKFSL 889
Cdd:cd00253 79 NTLTVNGNYLGGnGTFVLNTDLGGDNSPTDKLVVTGNASGTTNVAVVNAGGEGASTGDGIELVE-----VNGGSDAAFSL 153
|
170 180 190
....*....|....*....|....*....|...
gi 1014500893 890 AgsGYVNMGAYDYTL----VEDNNDWYLRSQEV 918
Cdd:cd00253 154 A--GRVDAGAYEYTLykggVGNNGNWYLRSTLA 184
|
|
| Autotransporter |
pfam03797 |
Autotransporter beta-domain; Secretion of protein products occurs by a number of different ... |
983-1222 |
8.91e-25 |
|
Autotransporter beta-domain; Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type V pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C terminus of the proteins it occurs in. The N terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different protease is used and in some cases no cleavage occurs.
Pssm-ID: 461054 [Multi-domain] Cd Length: 255 Bit Score: 104.77 E-value: 8.91e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 983 LRVIGGRYHY-TAAGQLAQHEDTSTVQLSGDLFSGrwgddGEWMLGAVGGYSDnqgeSRSNMTGTRADNQNHGYAVGLTS 1061
Cdd:pfam03797 3 ARGFGGRGKQdGDGGAAGYDADTGGLQVGADYRLG-----DNLRLGVAFGYSR----SDADVDGRGGSGDSDSYSLGLYG 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1062 SWYQHGnqkqGAWLDSWLQYAWFNNDVS-------EQDDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQ 1134
Cdd:pfam03797 74 TYYGDG----GWYLDGGLGYGWHDNDTRrsvdlggFSETAKGDYDGNGFGASLEAGYRFALGGGWTLEPFAGLAYVRLRL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1135 DDFTAANHA---RVSQSQGDDIQTRLGLHSEWRTAVG---VTPTLDLNYYHDPHATEIEEDGS-----------TISDDA 1197
Cdd:pfam03797 150 DGFTESGGAaalSVDSQSYDSLTGRLGLRLSYTFDLGggtLTPYARLGWRHEFGDDDPVTTAAfaglsgagsftVAGADL 229
|
250 260
....*....|....*....|....*
gi 1014500893 1198 VKRRGEIKVGVTGNISQRVSLRGSV 1222
Cdd:pfam03797 230 ARDSLELGAGLSAQLSDNLSLYANY 254
|
|
| Autotransporter |
smart00869 |
Autotransporter beta-domain; Secretion of protein products occurs by a number of different ... |
983-1233 |
8.89e-24 |
|
Autotransporter beta-domain; Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type IV pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C-terminus of the proteins it occurs in. The N-terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different peptidase is used and in some cases no cleavage occurs.
Pssm-ID: 214872 [Multi-domain] Cd Length: 268 Bit Score: 102.26 E-value: 8.89e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 983 LRVIGGRYHYTAAGQLAQHE---DTSTVQLSGDLfsgRWGDDGEWMLGAVGGYSDNQGESRSNMTGTRADNqnHGYAVGL 1059
Cdd:smart00869 1 GRGLGGFLRQDSSGSGGSAGfdyDSYGLQLGADY---RLSDNGNLSLGFAAGYGNSKVDFSGNKGSGKGDV--DSYGLGL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1060 TSSWYQHgnqkQGAWLDSWLQYAWFNNDVS------EQDDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQ 1133
Cdd:smart00869 76 YAGYSLG----NGLYLDAQLGYGRSDNDTKrkvtlgGAGRAKGSYDGTGYGASLEAGYRFYLGGGLTLTPFAGLAYSRVR 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1134 QDDFT----AANHARVSQSQGDDIQTRLGLHSEWRTAVG----VTPTLDLNYYHD---------PHATEIEEDGSTISDD 1196
Cdd:smart00869 152 QDGFTesggGAFGLSVDSQSLDSLSLPLGLRLEYRLALGdgatLTPYLRLAYVHDfyddnpvvtASLLGSGASFTTSGTD 231
|
250 260 270
....*....|....*....|....*....|....*..
gi 1014500893 1197 AVKRRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQ 1233
Cdd:smart00869 232 LDRNAAELGLGLSAKLSNGLSLSLNYDGEFGGSSRSH 268
|
|
| AC_1 |
pfam18883 |
Autochaperone Domain Type 1; This entry represents the autochaperone domain of type 1 (AC-1) ... |
793-904 |
3.75e-15 |
|
Autochaperone Domain Type 1; This entry represents the autochaperone domain of type 1 (AC-1) in the Type Va Secretion System (T5aSS). Autotransporters (ATs) belong to a family of modular proteins secreted by the Type V, subtype a, secretion system (T5aSS) and considered as an important source of virulence factors in lipopolysaccharidic diderm bacteria (archetypical Gram-negative bacteria). The AC of type 1 with beta-fold appears as a prevalent and conserved structural element exclusively associated to beta-helical AT passenger.
Pssm-ID: 465898 [Multi-domain] Cd Length: 114 Bit Score: 72.64 E-value: 3.75e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 793 GNLTNTSGAVSLQ--NGVAGDTLTVNGDYTG-GGTLLLDSELNGDDSVSDQLVLNGNTA-GNTTVVVNSITGIGEPTST- 867
Cdd:pfam18883 4 TNLTNDNSTINFTapSGASYKTLTVDGDYTGnDGTLALNTYLGGDGSPSDKLVIDGGTAsGTTNLRINNTGGPGALTTNd 83
|
90 100 110
....*....|....*....|....*....|....*..
gi 1014500893 868 GIKVVDfAADPTQFQnnaKFSLagSGYVNMGAYDYTL 904
Cdd:pfam18883 84 GILVVD-VGGTTSDG---AFRL--AGRAVAGPYEYLL 114
|
|
| PL1_Passenger_AT |
cd01343 |
Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 1, of ... |
700-913 |
2.23e-12 |
|
Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 1, of autotransporter proteins of the type V secretion system of Gram-negative bacteria. This subgroup includes the passenger domains of Neisseria and Haemophilus IgA1 proteases, SPATEs (serine protease autotransporters secreted by Enterobacteriaceae), Bordetella pertacins, and nonprotease autotransporters, TibA and similar AIDA-like proteins.
Pssm-ID: 238653 [Multi-domain] Cd Length: 233 Bit Score: 68.15 E-value: 2.23e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 700 YASSLWVGDGATFVTGadqDIQSIDATSSGTIDISD--GTVLrLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTN 777
Cdd:cd01343 26 YGSSVTLTNGAVLDAG---NANLSAAASYATLSGSNirGTVV-LGAGQPLQALAELLLGGNAAWTGAIQGLNATVSLNLN 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 778 letdSLTYLSDVTVNGNLTNTSGAVSLQNGVAGD--TLTVNgDYTGGGTLLLDSELNGDDSvsDQLVLNGNTAGNTTVVV 855
Cdd:cd01343 102 ----SVWTLTGDSNVNNLTLNGGTVDFNGPSAGKfnTLTVN-TLSGNGTFVMRTDLAGGQG--DKLVVTGSATGDFNLLV 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 856 NSITGigEPTS-TGIKVVDfaadpTQFQNNAKFSLAGsGYVNMGAYDYTLVED-NNDWYL 913
Cdd:cd01343 175 VNTGK--EPTSgLNLTLVS-----TPKGGDAEFTLAN-GTVDLGAYRYTLVKDgNGNWTL 226
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
48-1155 |
1.03e-10 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 66.71 E-value: 1.03e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 48 QSLSGITQDWSVADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTD 127
Cdd:COG3210 434 GITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIATG 513
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 128 VIFSGNVAGGYGGAIYSSGTNDTGVVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGA 207
Cdd:COG3210 514 LTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANTLGVLAATGGTSNATTAGNSTSATGGTG 593
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 208 IDVTDNNSDSKHPSGYTIINNTAFTNNTAEGYGGAIYTNSATAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSTAA 287
Cdd:COG3210 594 TNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGG 673
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 288 SGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGlITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNV 367
Cdd:COG3210 674 TTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGS-ITVTGQIGALANANGDTVTFGNLGTGATLTLNAGVTITSG 752
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 368 GDTHCQDDPQDCYGLTIGSIDKYQNQAELNVGSTQQTFVHSLTGFQNGTLNIDAGGNVTVNQGSFAGTI---EGAGQLTI 444
Cdd:COG3210 753 NAGTLSIGLTANTTASGTTLTLANANGNTSAGATLDNAGAEISIDITADGTITAAGTTAINVTGSGGTItinTATTGLTG 832
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 445 AQNGSYVLSGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGT 524
Cdd:COG3210 833 TGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAV 912
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 525 VIGSQDVVDLAGGNDMHIGGDGKDGVYVVVDAGDGQVSLANNNSYLGTTQIASGMLEVSDNSQLGDTHYNRQVIFTDKQQ 604
Cdd:COG3210 913 LATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIA 992
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 605 ESVMEITANVDTRSTTTEHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVR 684
Cdd:COG3210 993 ATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGG 1072
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 685 VEEGTLKGDVADILPYASSLWVGDGATFVTGADqDIQSIDATSSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNA 764
Cdd:COG3210 1073 TAASNGGGGTAQASGAGTTHTLGGITNGGATGT-SGGTTTSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAV 1151
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 765 TDGVTLTGELNTNLETDSLTYLSDVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVLN 844
Cdd:COG3210 1152 SAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTT 1231
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 845 GNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAKFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPLPP 924
Cdd:COG3210 1232 ATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANG 1311
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 925 DPDPDPTPDPDPTPDPIPAYQPVLNANVGGYLNNLRAANQAFMMERRDHAGGNGQTLNLRVIGGRYHYTAAGQLAQHEDT 1004
Cdd:COG3210 1312 ATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNGGNGATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNT 1391
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 1005 STVQLSGDLFSGRWGDDGEWMLGAVGGYSDNQGESRSNMTGTRADNQNHGYAVGLTSSWYQHGNQKQGAWLDSWLQYAWF 1084
Cdd:COG3210 1392 GAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTGGTGNTTGTSVAGAGGGNADASAINTGNASSLGAGGS 1471
|
1050 1060 1070 1080 1090 1100 1110
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1014500893 1085 NNDVSEQDDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQT 1155
Cdd:COG3210 1472 TAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTAGGTTAEVAKASLEGGEGTYGGSSVAEAGTG 1542
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
68-910 |
9.02e-09 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 60.17 E-value: 9.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 68 SDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGT 147
Cdd:COG3210 209 LANAGGGTAGGVASANSTLTGGVVAAGTGAGVISTGGTDISSLSVAAGAGTGGAGGTGNAGNTTIGTTVTGTNATGSNTA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 148 NDTGVVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIIN 227
Cdd:COG3210 289 GASSGDTTTNGTSSVTGAGGTGVLGGGTAAGITTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSGLTGTGN 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 228 NTAFTNNTAEGYGGAIYTNSATAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSTAASGFMYLGLSEVTFDIADGKT 307
Cdd:COG3210 369 GGGLTTAGAGTVASTVGTATASTGNASSTTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTIGG 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 308 LVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSI 387
Cdd:COG3210 449 LTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIATGLTGITAGGGGGGNAT 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 388 dkyQNQAELNVGSTQQTFVHSLTGFQNGTLNIDAGGNVTVNQGSFAGTIEGAGQLTIAQNGSYVLSGAQSMALTGDIVVD 467
Cdd:COG3210 529 ---SGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANTLGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLSIGT 605
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 468 DGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGNDMHIGGDGK 547
Cdd:COG3210 606 GSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGG 685
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 548 DGVYVVVDAGDGQVSLANNNSYLGTTQIASGMLEVSDNSQLGDThynrqviFTDKQQESVMEITANVDTRSTTTEHGRDI 627
Cdd:COG3210 686 TTGTTLNAATGGTLNNAGNTLTISTGSITVTGQIGALANANGDT-------VTFGNLGTGATLTLNAGVTITSGNAGTLS 758
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 628 EMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLkgdvadILPYASSLWVG 707
Cdd:COG3210 759 IGLTANTTASGTTLTLANANGNTSAGATLDNAGAEISIDITADGTITAAGTTAINVTGSGGTI------TINTATTGLTG 832
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 708 DGATFVTGADQDIQSIDATSSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLS 787
Cdd:COG3210 833 TGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAV 912
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 788 DVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVLNGNTAGNTTVVVNSITGIGEPTST 867
Cdd:COG3210 913 LATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIA 992
|
810 820 830 840
....*....|....*....|....*....|....*....|...
gi 1014500893 868 GIKVVDFAADPTQFQNNAKFSLAGSGYVNMGAYDYTLVEDNND 910
Cdd:COG3210 993 ATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTG 1035
|
|
| PRK15319 |
PRK15319 |
fibronectin-binding autotransporter adhesin ShdA; |
299-806 |
3.67e-05 |
|
fibronectin-binding autotransporter adhesin ShdA;
Pssm-ID: 185219 [Multi-domain] Cd Length: 2039 Bit Score: 48.54 E-value: 3.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 299 TFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFtGEMQIENGeVTLGRSNSLMNVGDTHCQDDPQd 378
Cdd:PRK15319 596 TFTVDAGSTFTVTSELDETTATSNWNGSKLTKQGDGTLILSNTGNDY-GDTEIDGG-ILAAKDAAALGTGDVTIAESAT- 672
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 379 cYGLTIGSID-KYQNQAELNVGSTQQTFVHSLTGFQNGTL-----------------NIDAGGNVTVNQGSFAGTIEGAG 440
Cdd:PRK15319 673 -LALSQGTLDnNVTGEGQIVKSGSDELIVTGDNNYSGGTTisggtltadhadslgsgDVDNSGVLKVGEGELENILSGSG 751
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 441 QLTIAQNGSYVLSGAQSMA----LTGDIVVDDGAVLSLEGD----------AADLTALQDDPQSIVLNG-GVLDLSDFST 505
Cdd:PRK15319 752 SLVKTGTGELTLSGDNTYSggttITGGTLTADHADSLGSGDidnsgvlkvgEGDLENTLSGSGSLVKTGtGELTLSGGND 831
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 506 WQSGTSYNDGlEVSGSSGTVIGSQDVvdlAGGNDMHIG-GDGKDGVY---VVVDAGDGQVSLANNNSYLGTTQIASGMLE 581
Cdd:PRK15319 832 YSGGTTIIGG-TLTADHADSLGSGDI---DNSGVLQVGeGELKNTLFgsgSLVKTGTGELTLNGDNDYSGGTTIDDGVLI 907
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 582 VSDNSQLGDTHYNRQVIFTDKQQESVMEITANVDTRSTTTEhgrdiEMRADGEVAVDAGVDTQWGALMADSS---GQHQD 658
Cdd:PRK15319 908 ADHADSLGTGAVANSGVLQVGEGELKNTLSGSGSLVKTGTG-----ELTLSGDNSYSGGTTIIGGTLIADHAdslGTGAV 982
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 659 EGSTLTKTGAGTLELTASGTTqSAVRVEEG--TLKGDVAdilpYASSLWVGDGaTFVTGADQDIQSIDATSSGTIDISDG 736
Cdd:PRK15319 983 ANSGVLQVGEGELENTLSGSG-SLVKTGTGelTLGGDNS----YSGDTTIADG-TLIAANVNALGSGNIDNSGTLMLDAN 1056
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1014500893 737 TVLRLTGQDTSVALNASLFNG---DGTLVNATDGVTLTGELNTnlETDSLTYLSDVTVNGNLTNTSGAVSLQN 806
Cdd:PRK15319 1057 GAFELANITTHSGATTALAAGstlDAGQLTQEDGSTLSIDLGA--ATDDAVITADSVTLGGTLNVTGIGSVTD 1127
|
|
| Pertactin |
pfam03212 |
Pertactin; |
812-913 |
9.64e-04 |
|
Pertactin;
Pssm-ID: 460848 [Multi-domain] Cd Length: 121 Bit Score: 40.45 E-value: 9.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 812 TLTVNGdYTGGGTLLLDSELngDDSVSDQLVLNGNTAGNTTVVVNSiTGiGEPTSTGiKVVDFAADPtqfQNNAKFSLAG 891
Cdd:pfam03212 25 TLTTQT-LSGSGTFVMNADV--ASGTGDQLVVSGNASGQHVLLVRN-TG-SEPASGN-TKLTLVETG---GGDAAFTLGN 95
|
90 100
....*....|....*....|....
gi 1014500893 892 SG-YVNMGAYDYTLVEDNN-DWYL 913
Cdd:pfam03212 96 KGgKVDAGTYRYRLTADGNgNWSL 119
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
49-538 |
1.36e-03 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 43.23 E-value: 1.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 49 SLSGITQDWSVADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDV 128
Cdd:COG4625 7 GGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGGG 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 129 IFSGNVAGGYGGAIYSSGTNDTGVVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAI 208
Cdd:COG4625 87 GGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 209 DVTDNNSDSKHPSGYTIINNTAFTNNTAEGYGGAIYTNSATAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSTAAS 288
Cdd:COG4625 167 GGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 289 GFMYLGLSEVTfDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVG 368
Cdd:COG4625 247 GAGGGGGGGGG-NGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 369 DTHCQDDPQDCYGLTIGSIDKYQNQAELNVGSTQQTFVHSLTGFQNGTLNIDAGGNVTVNQGSFAGTIEGAGQLTIAQNG 448
Cdd:COG4625 326 GGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGGA 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 449 SYVLSGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGS 528
Cdd:COG4625 406 GGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNNTYT 485
|
490
....*....|
gi 1014500893 529 QDVVDLAGGN 538
Cdd:COG4625 486 GTTTVNGGGN 495
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
381-857 |
2.23e-03 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 42.46 E-value: 2.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 381 GLTIGSIDKYQNQAELNVGSTQQTFVHSLTGFQNGTLNIDAGGNVTVNQGSFAGTIEGAGQLTIAQNGSYVLSGAQSMAL 460
Cdd:COG4625 15 GGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGTGGVG 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 461 TGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGNDM 540
Cdd:COG4625 95 GGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGGGGGGGGGGG 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 541 HIGGDGKDGVYVVVDAGDGQVSLANNNSYLGTTQIASGMLEVSDNSQLGDTHYNRQVIFTDKQQESVMEITANVDTRSTT 620
Cdd:COG4625 175 GGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGG 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 621 TEHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPY 700
Cdd:COG4625 255 GGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGA 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1014500893 701 AS-SLWVGDGATFVTGADQDIQSIDATSSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLE 779
Cdd:COG4625 335 GGgGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTGGGGAG 414
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1014500893 780 TDSLTYLSDVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVLNGNTAGNTTVVVNS 857
Cdd:COG4625 415 GGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNNTYTGTTTVNG 492
|
|
| PATR |
pfam12951 |
Passenger-associated-transport-repeat; This Autotransporter-associated beta strand repeat ... |
663-690 |
8.53e-03 |
|
Passenger-associated-transport-repeat; This Autotransporter-associated beta strand repeat model represents a core 32-residue region of a class of bacterial protein repeat found in one to 30 copies per protein. Most proteins with a copy of this repeat have domains associated with membrane autotransporters (pfam03797). The repeats occur with a periodicity of 60 to 100 residues. A pattern of sequence conservation is that every second residue is well-conserved across most of the domain. These repeats as likely to have a beta-helical structure. This repeat plays a role in the efficient transport of autotransporter virulence factors to the bacterial surface during growth and infection. The repeat is always associated with the passenger domain of the autotransporter. For these reasons it has been coined the Passenger-associated Transport Repeat (PATR). The mechanism by which the PATR motif promotes transport is uncertain but it is likely that the conserved glycines (see HMM Logo) are required for flexibility of folding and that this folding drives secretion. Autotransporters that contain PATR(s) associate with distinct virulence traits such as subtilisin (S8) type protease domains and polymorphic outer-membrane protein repeats, whilst SPATE (S6) type protease and lipase-like autotransporters do not tend to contain PATR motifs.
Pssm-ID: 463760 [Multi-domain] Cd Length: 28 Bit Score: 35.01 E-value: 8.53e-03
10 20
....*....|....*....|....*...
gi 1014500893 663 LTKTGAGTLELTASGTTQSAVRVEEGTL 690
Cdd:pfam12951 1 LTKTGAGTLTLTGANTYTGGTTVNAGTL 28
|
|
| |
