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Conserved domains on  [gi|154240673|ref|NP_001001701|]
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uncharacterized protein C4orf3 isoform 2 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF5542 pfam17696
Family of unknown function (DUF5542); This is a family of unknown function. The C-terminal has ...
 1-66 5.28e-37

Family of unknown function (DUF5542); This is a family of unknown function. The C-terminal has a strongly conserved WxxxW motif.


:

Pssm-ID: 465462  Cd Length: 68  Bit Score: 117.66  E-value: 5.28e-37
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 154240673   1 MEVDAPGVDGRDGLRERRGFSEGGR--QNFDVRPQSGANGLPKHSYWLDLWLFILFDVVVFLFVYFLP 66
Cdd:pfam17696  1 MEVDAAAESGRDGPRERRGLGEAGRqqQNHEVRPQSGANGIPKHSYWLDLWLFILFDLVLFFFVYLLP 68
 
Name Accession Description Interval E-value
DUF5542 pfam17696
Family of unknown function (DUF5542); This is a family of unknown function. The C-terminal has ...
 1-66 5.28e-37

Family of unknown function (DUF5542); This is a family of unknown function. The C-terminal has a strongly conserved WxxxW motif.


Pssm-ID: 465462  Cd Length: 68  Bit Score: 117.66  E-value: 5.28e-37
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 154240673   1 MEVDAPGVDGRDGLRERRGFSEGGR--QNFDVRPQSGANGLPKHSYWLDLWLFILFDVVVFLFVYFLP 66
Cdd:pfam17696  1 MEVDAAAESGRDGPRERRGLGEAGRqqQNHEVRPQSGANGIPKHSYWLDLWLFILFDLVLFFFVYLLP 68
 
Name Accession Description Interval E-value
DUF5542 pfam17696
Family of unknown function (DUF5542); This is a family of unknown function. The C-terminal has ...
 1-66 5.28e-37

Family of unknown function (DUF5542); This is a family of unknown function. The C-terminal has a strongly conserved WxxxW motif.


Pssm-ID: 465462  Cd Length: 68  Bit Score: 117.66  E-value: 5.28e-37
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 154240673   1 MEVDAPGVDGRDGLRERRGFSEGGR--QNFDVRPQSGANGLPKHSYWLDLWLFILFDVVVFLFVYFLP 66
Cdd:pfam17696  1 MEVDAAAESGRDGPRERRGLGEAGRqqQNHEVRPQSGANGIPKHSYWLDLWLFILFDLVLFFFVYLLP 68
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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