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Conserved domains on  [gi|58865820|ref|NP_001012125|]
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lysyl oxidase homolog 1 precursor [Rattus norvegicus]

Protein Classification

Lysyl_oxidase domain-containing protein( domain architecture ID 10471871)

Lysyl_oxidase domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Lysyl_oxidase pfam01186
Lysyl oxidase;
404-603 4.57e-131

Lysyl oxidase;


:

Pssm-ID: 460102  Cd Length: 204  Bit Score: 382.39  E-value: 4.57e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58865820   404 PDLVPDPNYVQASTYVQRAHLYSLRCAAEEKCLASTAYA----PEATDYDLRVLLRFPQRVKNQGTADFLPNRPRHTWEW 479
Cdd:pfam01186   1 PDLVPDAAEIQQSAYLEDRPMYYLQCAMEENCLASSAYQiqrnPSDWHYGTRRLLRFTARVKNVGTADFRPKLPKHAWEW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58865820   480 HSCHQHYHSMDEFSHYDLLDAStGKKVAEGHKASFCLEDSTCDFGNLKRYACTSHT-QGLSPGCYDTYNADIDCQWIDIT 558
Cdd:pfam01186  81 HQCHMHYHSMEVFAHYDVLDLN-GTKVAEGHKASFCLEDTECDPGVSKRYACANFGdQGISVGCWDTYRHDIDCQWIDIT 159
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 58865820   559 DVQPGNYILKVHVNPKYIVLESDFTNNVVRCNIHYTGRFVSTTNC 603
Cdd:pfam01186 160 DVPPGNYILKVVINPEFKVAESDFDNNAARCDLRYTGHRVWVYNC 204
 
Name Accession Description Interval E-value
Lysyl_oxidase pfam01186
Lysyl oxidase;
404-603 4.57e-131

Lysyl oxidase;


Pssm-ID: 460102  Cd Length: 204  Bit Score: 382.39  E-value: 4.57e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58865820   404 PDLVPDPNYVQASTYVQRAHLYSLRCAAEEKCLASTAYA----PEATDYDLRVLLRFPQRVKNQGTADFLPNRPRHTWEW 479
Cdd:pfam01186   1 PDLVPDAAEIQQSAYLEDRPMYYLQCAMEENCLASSAYQiqrnPSDWHYGTRRLLRFTARVKNVGTADFRPKLPKHAWEW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58865820   480 HSCHQHYHSMDEFSHYDLLDAStGKKVAEGHKASFCLEDSTCDFGNLKRYACTSHT-QGLSPGCYDTYNADIDCQWIDIT 558
Cdd:pfam01186  81 HQCHMHYHSMEVFAHYDVLDLN-GTKVAEGHKASFCLEDTECDPGVSKRYACANFGdQGISVGCWDTYRHDIDCQWIDIT 159
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 58865820   559 DVQPGNYILKVHVNPKYIVLESDFTNNVVRCNIHYTGRFVSTTNC 603
Cdd:pfam01186 160 DVPPGNYILKVVINPEFKVAESDFDNNAARCDLRYTGHRVWVYNC 204
 
Name Accession Description Interval E-value
Lysyl_oxidase pfam01186
Lysyl oxidase;
404-603 4.57e-131

Lysyl oxidase;


Pssm-ID: 460102  Cd Length: 204  Bit Score: 382.39  E-value: 4.57e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58865820   404 PDLVPDPNYVQASTYVQRAHLYSLRCAAEEKCLASTAYA----PEATDYDLRVLLRFPQRVKNQGTADFLPNRPRHTWEW 479
Cdd:pfam01186   1 PDLVPDAAEIQQSAYLEDRPMYYLQCAMEENCLASSAYQiqrnPSDWHYGTRRLLRFTARVKNVGTADFRPKLPKHAWEW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58865820   480 HSCHQHYHSMDEFSHYDLLDAStGKKVAEGHKASFCLEDSTCDFGNLKRYACTSHT-QGLSPGCYDTYNADIDCQWIDIT 558
Cdd:pfam01186  81 HQCHMHYHSMEVFAHYDVLDLN-GTKVAEGHKASFCLEDTECDPGVSKRYACANFGdQGISVGCWDTYRHDIDCQWIDIT 159
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 58865820   559 DVQPGNYILKVHVNPKYIVLESDFTNNVVRCNIHYTGRFVSTTNC 603
Cdd:pfam01186 160 DVPPGNYILKVVINPEFKVAESDFDNNAARCDLRYTGHRVWVYNC 204
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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