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Conserved domains on  [gi|115648063|ref|NP_001070253|]
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Y+L amino acid transporter 2 [Homo sapiens]

Protein Classification

amino acid permease( domain architecture ID 1000062)

amino acid permease facilitates the transport of amino acids, similar to solute carrier family 7 (SLC7) members

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
2A0308 super family cl30119
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 17-501 0e+00

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


The actual alignment was detected with superfamily member TIGR00911:

Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 564.76  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063   17 PNTSQSQVEEDVSSPPQRSSETMQLKKEISLLNGVSLVVGNMIGSGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGAL 96
Cdd:TIGR00911  16 YQFSSSGRKKSVSASTVDGGEAVALKKEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVGLALIMWAVCGIFSIVGAL 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063   97 CYAELGTTITKSGASYAYILEAFGGFIAFIRLWVSLLVVEPTGQAIIAITFANYIIQPSFPSCDPPYLACRLLAAACICL 176
Cdd:TIGR00911  96 VYAELGTTIPKSGGEYNYILEVFGPLLAFLRLWIELLVIRPGSQAVNALNFAIYILTPVFPDCEVPEWAIRLVAVLCVLL 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  177 LTFVNCAYVKWGTRVQDTFTYAKVVALIAIIVMGLVKLCQGHSEHF--QDAFEGSSWDMGNLSLALYSALFSYSGWDTLN 254
Cdd:TIGR00911 176 LTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVESLnpKNAFEGTETSAGGIVLAFYSGIWAYGGWNYLN 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  255 FVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNISDVLSSDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNA 334
Cdd:TIGR00911 256 FVTEEVKNPYRTLPIAIIISMPIVTFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNG 335

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  335 SIFASSRLFFVGSREGHLPDLLSMIHIERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLRWK 414
Cdd:TIGR00911 336 SLFSSSRLFFVGGREGHLPSLLSMIHVKRLTPLPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLRYK 415

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  415 EPKRPRPLKLSVFFPIVFCICSVFLVIVPLFTDTINSLIGIGIALSGVPFYFMGVYLpeSRRPLFIRNVLAAITRGTQQL 494
Cdd:TIGR00911 416 RPEMNRPIKVPLFFPVFFLLSCLFLIILSLYSPPVGCGVGFIIMLTGVPVYFFGVWW--QNKPKWFRYLIVSKTVLLQKV 493


                  ....*..
gi 115648063  495 CFCVLTE 501
Cdd:TIGR00911 494 LEVVKPQ 500
 
Name Accession Description Interval E-value
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 17-501 0e+00

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 564.76  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063   17 PNTSQSQVEEDVSSPPQRSSETMQLKKEISLLNGVSLVVGNMIGSGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGAL 96
Cdd:TIGR00911  16 YQFSSSGRKKSVSASTVDGGEAVALKKEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVGLALIMWAVCGIFSIVGAL 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063   97 CYAELGTTITKSGASYAYILEAFGGFIAFIRLWVSLLVVEPTGQAIIAITFANYIIQPSFPSCDPPYLACRLLAAACICL 176
Cdd:TIGR00911  96 VYAELGTTIPKSGGEYNYILEVFGPLLAFLRLWIELLVIRPGSQAVNALNFAIYILTPVFPDCEVPEWAIRLVAVLCVLL 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  177 LTFVNCAYVKWGTRVQDTFTYAKVVALIAIIVMGLVKLCQGHSEHF--QDAFEGSSWDMGNLSLALYSALFSYSGWDTLN 254
Cdd:TIGR00911 176 LTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVESLnpKNAFEGTETSAGGIVLAFYSGIWAYGGWNYLN 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  255 FVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNISDVLSSDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNA 334
Cdd:TIGR00911 256 FVTEEVKNPYRTLPIAIIISMPIVTFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNG 335

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  335 SIFASSRLFFVGSREGHLPDLLSMIHIERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLRWK 414
Cdd:TIGR00911 336 SLFSSSRLFFVGGREGHLPSLLSMIHVKRLTPLPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLRYK 415

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  415 EPKRPRPLKLSVFFPIVFCICSVFLVIVPLFTDTINSLIGIGIALSGVPFYFMGVYLpeSRRPLFIRNVLAAITRGTQQL 494
Cdd:TIGR00911 416 RPEMNRPIKVPLFFPVFFLLSCLFLIILSLYSPPVGCGVGFIIMLTGVPVYFFGVWW--QNKPKWFRYLIVSKTVLLQKV 493


                  ....*..
gi 115648063  495 CFCVLTE 501
Cdd:TIGR00911 494 LEVVKPQ 500
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
35-467 2.66e-77

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 249.43  E-value: 2.66e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  35 SSETMQLKKEISLLNGVSLVVGNMIGSGIFVSPkGVLVHTASYGMsLIVWAIGGLFSVVGALCYAELGTTITKSGASYAY 114
Cdd:COG0531    3 RGESSELKRKLGLFDLVALGVGAIIGAGIFVLP-GLAAGLAGPAA-ILAWLIAGLLALLVALSYAELASAFPRAGGAYTY 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 115 ILEAFGGFIAFIRLWvSLLVVEPTGQAIIAITFANYIiQPSFPscdppYLACRLLAAACICLLTFVNCAYVKWGTRVQDT 194
Cdd:COG0531   81 ARRALGPLLGFLAGW-ALLLSYVLAVAAVAVAFGGYL-SSLFP-----AGGSVLIALVLILLLTLLNLRGVKESAKVNNI 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 195 FTYAKVVALIAIIVMGLVKlcqGHSEHFQdAFEGSSWDMGNLSLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGIS 274
Cdd:COG0531  154 LTVLKLLVLLLFIVVGLFA---FDPANFT-PFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILS 229

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 275 MPIVTLIYILTNVAYYTVLNISDVLSSDAVAVTFADQTFG-MFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLP 353
Cdd:COG0531  230 LLIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGpWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLP 309

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 354 DLLSMIHIERFTPIPALLFNCTMALIYLIV--EDVFQLINYFSFSYWFFVGLSVVGQLYLRWKEPKRPRPLKLSVFFPIV 431
Cdd:COG0531  310 KVFAKVHPRFGTPVNAILLTGVIALLLLLLgaASFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFRVPLPLIPI 389

                        410       420       430
                 ....*....|....*....|....*....|....*.
gi 115648063 432 FCICSVFLVIVPLFTDTInsLIGIGIALSGVPFYFM 467
Cdd:COG0531  390 LGILLCLFLLYLLGPGAL--LIGLVLLAIGLLLYLL 423
AA_permease_2 pfam13520
Amino acid permease;
45-445 5.11e-45

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 163.64  E-value: 5.11e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063   45 ISLLNGVSLVVGNMIGSGIFVSPKgvlvhTASYGMSLIVWAIGG--LFSVVGALCYAELGTTITKSGASYAYILEAFGGF 122
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVAPL-----VASGGPALIVWGWIAaiIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKF 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  123 IAFIRLWVSLLVVEPTGqAIIAITFANYIIQPSFPSCDPPYLACRLLAAACICLLTFVNCAYVKWGTRVQDTFTYAKVVA 202
Cdd:pfam13520  76 VAFLAGWSNWFAYVLGL-ASSASVAASYLLSALGPDLVPTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLLL 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  203 LIA-IIVMGLVKLCQGH---SEHFQDAFEGSSWDmGNLSlALYSALFSYSGWDTLNFVTEEIKNpeRNLPLAIGISMPIV 278
Cdd:pfam13520 155 PLIlIIILGLVTADGGGfnlLSGEWHTFFPDGWP-GVFA-GFLGVLWSFTGFESAANVSEEVKK--RNVPKAIFIGVIIV 230

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  279 TLIYILTNVAYYTVLNISDVLSSD---AVAVTFADQTFG-MFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPD 354
Cdd:pfam13520 231 GVLYILVNIAFFGVVPDDEIALSSglgQVAALLFQAVGGkWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPF 310

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  355 LLSMIHIERF-TPIPALLFNCT----MALIYLIVEDVFQ-LINYFSFSYWFFVGLSVVGQLYLRWKEPKRPRPlKLSVFF 428
Cdd:pfam13520 311 SRFFAKVNKFgSPIRAIILTAIlsliLLLLFLLSPAAYNaLLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRI-PGRWPV 389

                         410
                  ....*....|....*..
gi 115648063  429 PIVFCICSVFLVIVPLF 445
Cdd:pfam13520 390 AIFGILFSLFLIVALFF 406
frlA PRK11357
amino acid permease;
40-466 1.70e-30

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 123.43  E-value: 1.70e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  40 QLKKEISLLNGVSLVVGNMIGSGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYILEAF 119
Cdd:PRK11357   5 ELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAG 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 120 GGFIAFIRLWVSLLVVEPTGQAIIAITFANYIiqPSFPSCDPpyLACRLLAAACICLLTFVNCAYVKWGTRVQDTFTYAK 199
Cdd:PRK11357  85 SRPLAFLSGWASFWANDAPSLSIMALAIVSNL--GFLTPIDP--LLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAK 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 200 VVALIAIIVMGLVKLCQGHSEHFQDAFEGSSWDMGNLSLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVT 279
Cdd:PRK11357 161 IIPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 280 LIYILTNVAYYTVLNISDVLSSD---AVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLL 356
Cdd:PRK11357 241 VLYTLLALVISGLMPFDKLANSEtpiSDALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCF 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 357 SMIHIERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLR--------WKEPKRPrplkLSVFF 428
Cdd:PRK11357 321 GHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRkrddykplWRTPAFG----LMTTL 396

                        410       420       430
                 ....*....|....*....|....*....|....*....
gi 115648063 429 PIVfciCSVFLVIVPLFTDTINSLI-GIGIALSGVPFYF 466
Cdd:PRK11357 397 AIA---SSLILVASTFVWAPIPGLIcAVIVIATGLPAYA 432
 
Name Accession Description Interval E-value
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 17-501 0e+00

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 564.76  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063   17 PNTSQSQVEEDVSSPPQRSSETMQLKKEISLLNGVSLVVGNMIGSGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGAL 96
Cdd:TIGR00911  16 YQFSSSGRKKSVSASTVDGGEAVALKKEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVGLALIMWAVCGIFSIVGAL 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063   97 CYAELGTTITKSGASYAYILEAFGGFIAFIRLWVSLLVVEPTGQAIIAITFANYIIQPSFPSCDPPYLACRLLAAACICL 176
Cdd:TIGR00911  96 VYAELGTTIPKSGGEYNYILEVFGPLLAFLRLWIELLVIRPGSQAVNALNFAIYILTPVFPDCEVPEWAIRLVAVLCVLL 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  177 LTFVNCAYVKWGTRVQDTFTYAKVVALIAIIVMGLVKLCQGHSEHF--QDAFEGSSWDMGNLSLALYSALFSYSGWDTLN 254
Cdd:TIGR00911 176 LTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVESLnpKNAFEGTETSAGGIVLAFYSGIWAYGGWNYLN 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  255 FVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNISDVLSSDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNA 334
Cdd:TIGR00911 256 FVTEEVKNPYRTLPIAIIISMPIVTFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNG 335

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  335 SIFASSRLFFVGSREGHLPDLLSMIHIERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLRWK 414
Cdd:TIGR00911 336 SLFSSSRLFFVGGREGHLPSLLSMIHVKRLTPLPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLRYK 415

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  415 EPKRPRPLKLSVFFPIVFCICSVFLVIVPLFTDTINSLIGIGIALSGVPFYFMGVYLpeSRRPLFIRNVLAAITRGTQQL 494
Cdd:TIGR00911 416 RPEMNRPIKVPLFFPVFFLLSCLFLIILSLYSPPVGCGVGFIIMLTGVPVYFFGVWW--QNKPKWFRYLIVSKTVLLQKV 493


                  ....*..
gi 115648063  495 CFCVLTE 501
Cdd:TIGR00911 494 LEVVKPQ 500
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
35-467 2.66e-77

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 249.43  E-value: 2.66e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  35 SSETMQLKKEISLLNGVSLVVGNMIGSGIFVSPkGVLVHTASYGMsLIVWAIGGLFSVVGALCYAELGTTITKSGASYAY 114
Cdd:COG0531    3 RGESSELKRKLGLFDLVALGVGAIIGAGIFVLP-GLAAGLAGPAA-ILAWLIAGLLALLVALSYAELASAFPRAGGAYTY 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 115 ILEAFGGFIAFIRLWvSLLVVEPTGQAIIAITFANYIiQPSFPscdppYLACRLLAAACICLLTFVNCAYVKWGTRVQDT 194
Cdd:COG0531   81 ARRALGPLLGFLAGW-ALLLSYVLAVAAVAVAFGGYL-SSLFP-----AGGSVLIALVLILLLTLLNLRGVKESAKVNNI 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 195 FTYAKVVALIAIIVMGLVKlcqGHSEHFQdAFEGSSWDMGNLSLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGIS 274
Cdd:COG0531  154 LTVLKLLVLLLFIVVGLFA---FDPANFT-PFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILS 229

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 275 MPIVTLIYILTNVAYYTVLNISDVLSSDAVAVTFADQTFG-MFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLP 353
Cdd:COG0531  230 LLIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGpWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLP 309

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 354 DLLSMIHIERFTPIPALLFNCTMALIYLIV--EDVFQLINYFSFSYWFFVGLSVVGQLYLRWKEPKRPRPLKLSVFFPIV 431
Cdd:COG0531  310 KVFAKVHPRFGTPVNAILLTGVIALLLLLLgaASFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFRVPLPLIPI 389

                        410       420       430
                 ....*....|....*....|....*....|....*.
gi 115648063 432 FCICSVFLVIVPLFTDTInsLIGIGIALSGVPFYFM 467
Cdd:COG0531  390 LGILLCLFLLYLLGPGAL--LIGLVLLAIGLLLYLL 423
AA_permease_2 pfam13520
Amino acid permease;
45-445 5.11e-45

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 163.64  E-value: 5.11e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063   45 ISLLNGVSLVVGNMIGSGIFVSPKgvlvhTASYGMSLIVWAIGG--LFSVVGALCYAELGTTITKSGASYAYILEAFGGF 122
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVAPL-----VASGGPALIVWGWIAaiIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKF 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  123 IAFIRLWVSLLVVEPTGqAIIAITFANYIIQPSFPSCDPPYLACRLLAAACICLLTFVNCAYVKWGTRVQDTFTYAKVVA 202
Cdd:pfam13520  76 VAFLAGWSNWFAYVLGL-ASSASVAASYLLSALGPDLVPTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLLL 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  203 LIA-IIVMGLVKLCQGH---SEHFQDAFEGSSWDmGNLSlALYSALFSYSGWDTLNFVTEEIKNpeRNLPLAIGISMPIV 278
Cdd:pfam13520 155 PLIlIIILGLVTADGGGfnlLSGEWHTFFPDGWP-GVFA-GFLGVLWSFTGFESAANVSEEVKK--RNVPKAIFIGVIIV 230

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  279 TLIYILTNVAYYTVLNISDVLSSD---AVAVTFADQTFG-MFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPD 354
Cdd:pfam13520 231 GVLYILVNIAFFGVVPDDEIALSSglgQVAALLFQAVGGkWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPF 310

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  355 LLSMIHIERF-TPIPALLFNCT----MALIYLIVEDVFQ-LINYFSFSYWFFVGLSVVGQLYLRWKEPKRPRPlKLSVFF 428
Cdd:pfam13520 311 SRFFAKVNKFgSPIRAIILTAIlsliLLLLFLLSPAAYNaLLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRI-PGRWPV 389

                         410
                  ....*....|....*..
gi 115648063  429 PIVFCICSVFLVIVPLF 445
Cdd:pfam13520 390 AIFGILFSLFLIVALFF 406
frlA PRK11357
amino acid permease;
40-466 1.70e-30

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 123.43  E-value: 1.70e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  40 QLKKEISLLNGVSLVVGNMIGSGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYILEAF 119
Cdd:PRK11357   5 ELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAG 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 120 GGFIAFIRLWVSLLVVEPTGQAIIAITFANYIiqPSFPSCDPpyLACRLLAAACICLLTFVNCAYVKWGTRVQDTFTYAK 199
Cdd:PRK11357  85 SRPLAFLSGWASFWANDAPSLSIMALAIVSNL--GFLTPIDP--LLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAK 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 200 VVALIAIIVMGLVKLCQGHSEHFQDAFEGSSWDMGNLSLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVT 279
Cdd:PRK11357 161 IIPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 280 LIYILTNVAYYTVLNISDVLSSD---AVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLL 356
Cdd:PRK11357 241 VLYTLLALVISGLMPFDKLANSEtpiSDALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCF 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 357 SMIHIERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLR--------WKEPKRPrplkLSVFF 428
Cdd:PRK11357 321 GHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRkrddykplWRTPAFG----LMTTL 396

                        410       420       430
                 ....*....|....*....|....*....|....*....
gi 115648063 429 PIVfciCSVFLVIVPLFTDTINSLI-GIGIALSGVPFYF 466
Cdd:PRK11357 397 AIA---SSLILVASTFVWAPIPGLIcAVIVIATGLPAYA 432
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 35-414 1.68e-23

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 103.74  E-value: 1.68e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063   35 SSETMQLKKEISLLNGVSLVVGNMIGSGIFVSPKgvLVHTASYGMSLIV-WAIGGLFSVVGALCYAELGTTITKSGASYA 113
Cdd:TIGR00906  20 SREESKMKRCLTTWDLMALGIGSTIGAGIYVLTG--EVARNDSGPAIVLsFLISGLAAVLSGFCYAEFGARVPKAGSAYL 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  114 YILEAFGGFIAFIRLWvSLLVVEPTGQAIIA----ITFANYIIQP------SFPSCDPPYLACRL-LAAACICLLTFVNC 182
Cdd:TIGR00906  98 YSYVTVGELWAFITGW-NLILEYVIGTAAVArswsAYFDELLNKQigqfrrTYFKLNYDGLAEYPdFFAVCLILLLAVLL 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  183 AY-VKWGTRVQDTFTYAKVVALIAIIVMGLVKlcqGHSEHFQDAFEGSSWDM------GNLSLALySALFSYSGWDTLNF 255
Cdd:TIGR00906 177 SFgVKESAWVNKIFTAINILVLLFVIIAGFTK---ADVANWSITEEKGAGGFmpygftGVLSGAA-TCFFAFIGFDAIAT 252

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  256 VTEEIKNPERNLPLAIGISMPIVTLIYILTNVAyYTVLNISDVLSSDA-VAVTFAdqtfgMFSWTIP-IAVALSCFGGLN 333
Cdd:TIGR00906 253 TGEEVKNPQRAIPIGIVTSLLVCFVAYFLMSAA-LTLMMPYYLLDPDApFPVAFE-----YVGWDPAkYIVAVGALCGMS 326

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  334 ----ASIFASSRLFFVGSREGHLPDLLSMIHIERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQL 409
Cdd:TIGR00906 327 tsllGGMFPLPRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALMAFLFDLKALVDLLSIGTLLAYSLVAACVL 406


                  ....*
gi 115648063  410 YLRWK 414
Cdd:TIGR00906 407 ILRYQ 411
AA_permease pfam00324
Amino acid permease;
55-471 1.36e-22

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 100.47  E-value: 1.36e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063   55 VGNMIGSGIFVSpKGVLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYILE----AFGGFIAFIRLWV 130
Cdd:pfam00324   7 LGGVIGTGLFVG-SGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRflgpSLGFATGWNYWLS 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  131 SLLVveptgqAIIAITFANYIIQPSFPSCDPPYLAcrLLAAACICLLTFVNCAYVKWGTRVQDTFTYAKVVALIAIIVMG 210
Cdd:pfam00324  86 WITV------LALELTAASILIQFWELVPDIPYLW--VWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVG 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  211 LVKLCQGHSEHFQDA-FEGSSWDMGNLS--------LALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLI 281
Cdd:pfam00324 158 IILLSGGNPNDGAIFrYLGDNGGKNNFPpgfgkgfiSVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIF 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  282 YILTNVAYYTVLNISDVLSSDAVAVTFADQTFGMFSWTIPIAVAL-------SCFGGLNASIFASSRLFFVGSREGHLPD 354
Cdd:pfam00324 238 YILSLLAIGLLVPWNDPGLLNDSASAASPFVIFFKFLGISGLAPLinaviltAALSAANSSLYSGSRMLYSLARDGLAPK 317

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  355 LLsMIHIERFTPIPALLFNCTMALIyLIVEDVFQLINYFSF-----SYWFFVGLSVVGQLYLRWKEPKRPRPLKLSV--- 426
Cdd:pfam00324 318 FL-KKVDKRGVPLRAILVSMVISLL-ALLLASLNPAIVFNFllaisGLSGLIVWGLISLSHLRFRKAFKYQGRSIDElpf 395

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*...
gi 115648063  427 ---FFPIVFCICSVFLVIVPLFTDTINSLIGIGIALSGVPFYFMGVYL 471
Cdd:pfam00324 396 kapLGPLGVILGLAAIIIILIIQFLYAFLPVPGGPKNWGAGSFAAAYL 443
2A0302 TIGR00905
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
 38-440 8.43e-15

transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129983  Cd Length: 473  Bit Score: 76.63  E-value: 8.43e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063   38 TMQLKKEISLLNGVSLVVGNMIGSGIFVSPKGvLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTIT-KSGASYAYIL 116
Cdd:TIGR00905   2 SEAKSKKLGLFALTALVIGSMIGSGIFSLPQN-LASVAGPGAVIIGWIITGVGMLALAFVFAILATKKPeLDGGIYAYAR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  117 EAFGGFIAFIR---LWVSLLVVEpTGQAIIAITFANYIIqPSFPSCDPpyLACRLLAAACICLLTFVNCAYVKWGTRVQD 193
Cdd:TIGR00905  81 EGFGPYIGFMSgwgYWLSAWIGN-VAYAVLLFSALGYFF-PLFGSGNP--VPSILGASVLLWVFTFLVLRGVRQAAFINT 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  194 TFTYAKVVALIAIIVMGLVKLcqgHSEHFQDAFEG-SSWDMGNLSLALYSA----LFSYSGWDTLNFVTEEIKNpERNLP 268
Cdd:TIGR00905 157 ITTIAKLIPLFLFIIIGWFWF---KLDLFTADFWGhDVPSLGSVFSQVKNTmlvtLWVFIGIEGAVVSSGRAKN-KSDVG 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  269 LAIGISMPIVTLIYILTNVAYYTVLNISDVLSSDAVAVTFADQTFgMFSW---TIPIAVALSCFGGLNASIFASSRLFFV 345
Cdd:TIGR00905 233 KATVLGTLGALVIYILITLLSLGVLPQQELANLPNPSMAAVLEMI-VGKWgavLISLGLIISVLGSLLSWTMLAAEVPFS 311

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  346 GSREGHLPDLLSMIHiERFTPIPALlfnctmaLIYLIVEDVFQLINYFSFS-YWFFVGLSVVG-----------QLYLRW 413
Cdd:TIGR00905 312 AAKDGLFPKIFGRVN-KNGAPSVAL-------LLTNILIQLFLLLTLLTSSaYNVLVSLAVVMilvpyllsaayLLKLAK 383

                         410       420
                  ....*....|....*....|....*..
gi 115648063  414 KEPKRPRPLKLSVFFPIVFCICSVFLV 440
Cdd:TIGR00905 384 VGTYPKIKNRKALIVGVIACVYSIWLL 410
PRK10644 PRK10644
arginine/agmatine antiporter;
38-332 2.32e-13

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 72.13  E-value: 2.32e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  38 TMQLKKEISLLNGVSLVVGNMIGSGIFVSPKGVlvhTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYILE 117
Cdd:PRK10644   3 SDADAHKVGLIPVTLMVAGNIMGSGVFLLPANL---ASTGGIAIYGWLVTIIGALGLSMVYAKMSSLDPSPGGSYAYARR 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 118 AFGGFIAF---IRLWVSlLVVEPTGQAIIAITFANYIiqpsFPSCDPPYLACrLLAAACICLLTFVNCAYVKWGTRVQdt 194
Cdd:PRK10644  80 CFGPFLGYqtnVLYWLA-CWIGNIAMVVIGVGYLSYF----FPILKDPLVLT-ITCVVVLWIFVLLNIVGPKMITRVQ-- 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 195 fTYAKVVALIAIIVMGLVKLCQGHSEHFQDAFEGSSWD-MGNLSLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGI 273
Cdd:PRK10644 152 -AVATVLALIPIVGIAVFGWFWFRGETYMAAWNVSGLGtFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIG 230

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 115648063 274 SMPIVTLIYILTNVAYYTV-----LNISDVLSSDAVAVTFADQTFGMFSwtipIAVALSCFGGL 332
Cdd:PRK10644 231 GVLIAAVCYVLSSTAIMGMipnaaLRVSASPFGDAARMALGDTAGAIVS----FCAAAGCLGSL 290
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
 55-453 2.51e-12

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 68.99  E-value: 2.51e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  55 VGNMIGSGIFVSpKGVLVHTAsyGMSLI-VWAIGG--LFSVVGALCYAELGTTITKSGASYAY-ILEAFGGFIAFIRLWV 130
Cdd:PRK11049  32 IGGAIGTGLFMG-SGKTISLA--GPSIIfVYMIIGfmLFFVMRAMGELLLSNLEYKSFSDFASdLLGPWAGYFTGWTYWF 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 131 SLLVvepTGQA-IIAITFANYIIQPSFPSCDPpylacrllAAACICLLTFVNCAYVKWGTRVQDTFTYAKVVALIAIIVM 209
Cdd:PRK11049 109 CWVV---TGIAdVVAITAYAQFWFPDLSDWVA--------SLAVVLLLLSLNLATVKMFGEMEFWFAMIKIVAIVALIVV 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 210 GLVKLC------QGHSEHFQDAFEGSSW---DMGNLSLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGiSMPI-VT 279
Cdd:PRK11049 178 GLVMVAmhfqspTGVEASFAHLWNDGGMfpkGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAIN-SIPIrII 256

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 280 LIYILTNVAYYTVLNISDVLSSDAVAVT-FADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLLSM 358
Cdd:PRK11049 257 MFYVFALIVIMSVTPWSSVVPDKSPFVElFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKAFAK 336

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 359 IHiERFTPIPALLFNCT-----MALIYLI--VEDVFQLINYFSFSYWFFVgLSVVGQLYLRWKEpKRPRPLKLSVF---F 428
Cdd:PRK11049 337 LS-KRAVPAKGLTFSCIcllggVVLLYVNpsVIGAFTLVTTVSAILFMFV-WTIILCSYLVYRK-QRPHLHEKSIYkmpL 413

                        410       420       430
                 ....*....|....*....|....*....|
gi 115648063 429 PIVFC-ICSVF----LVIVPLFTDTINSLI 453
Cdd:PRK11049 414 GKLMCwVCMAFfafvLVLLTLEDDTRQALI 443
PRK10249 PRK10249
phenylalanine transporter; Provisional
 53-477 4.73e-12

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 68.09  E-value: 4.73e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  53 LVVGNMIGSGIFVSpKGVLVHTASYGMsLIVWAIGGlfsVVGALCYAELGTTITK-----SGASYAY-ILEAFGGFIAFI 126
Cdd:PRK10249  31 IALGGAIGTGLFLG-IGPAIQMAGPAV-LLGYGVAG---IIAFLIMRQLGEMVVEepvsgSFAHFAYkYWGPFAGFLSGW 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 127 RLWVSLLVVeptgqAIIAITFANYIIQPSFPscDPPYLacrLLAAACICLLTFVNCAYVKWGTRVQDTFTYAKVVALIAI 206
Cdd:PRK10249 106 NYWVMFVLV-----GMAELTAAGIYMQYWFP--DVPTW---IWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGM 175

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 207 IVMGLVKLCQGHS-EHF-------QDAFEGSSWDMGNLSLALysALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIV 278
Cdd:PRK10249 176 IGFGLWLLFSGHGgEKAsidnlwrYGGFFATGWNGLILSLAV--IMFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRI 253

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 279 TLIYILTNVAYYTVLNISDVLS-SDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLLS 357
Cdd:PRK10249 254 LLFYIGSLVVLLALYPWVEVKSnSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLT 333

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 358 MIHiERFTPIPALLF-----NCTMALIYLIVEDVFQLINYFSFSY----WFFVGLSvvgQLYLRWKEPKRPRPLKL-SVF 427
Cdd:PRK10249 334 RVS-RRGVPINSLMLsgaitSLVVLINYLLPQKAFGLLMALVVATlllnWIMICLA---HLRFRAAMRRQGRETQFkALL 409

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|
gi 115648063 428 FPIVFCICSVFLVIVPLFTDTINSLIGIGIALSgVPFYFMGVYLPESRRP 477
Cdd:PRK10249 410 YPFGNYLCIAFLGMILLLMCTMDDMRLSAILLP-VWIVFLFVAFKTLRRK 458
cadB PRK10435
cadaverine/lysine antiporter;
39-332 1.56e-11

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 66.31  E-value: 1.56e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  39 MQLKKEISLLNGVSLVVGNMIGSGIFVSPKGVlvhtASYGmSLIVWaiGGLFSVVGAL----CYAELGTTITKSGASYAY 114
Cdd:PRK10435   1 MSSAKKIGLFACTGVVAGNMMGSGIALLPANL----ASIG-SIAIW--GWIISIIGAMslayVYARLATKNPQQGGPIAY 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 115 ILE---AFG---GFIAFIRLWVsllvveptGQAIIAITFANYIiQPSFPSCDPPYLAcrllAAACIC---LLTFVNCAYV 185
Cdd:PRK10435  74 AGEispAFGfqtGVLYYHANWI--------GNLAIGITAVSYL-STFFPVLNDPIPA----GIACIAivwVFTFVNMLGG 140

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 186 KWGTRVQdtfTYAKVVALIAIIVMGLVKLcqghsEHFQDAFEGSSWDM--GNLSLALYSA----LFSYSGWDTLNFVTEE 259
Cdd:PRK10435 141 TWVSRLT---TIGLVLVLIPVVGTAIVGW-----HWFDAATYAANWNTsdTTDGHAIIKSillcLWAFVGVESAAVSTGM 212

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 115648063 260 IKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNISDVLSSDAVAVTFADQTFGmfSWTIPIA---VALSCFGGL 332
Cdd:PRK10435 213 VKNPKRTVPLATMLGTGLAGIIYIAATQVISGMFPASVMAASGAPFAISASTILG--NWAAPLVsafTAFACLTSL 286
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 42-450 3.44e-11

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 65.38  E-value: 3.44e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063   42 KKEISLLNGVSLVVGNMIGSGIFVSPKGVLVHTASYGMsLIVWAIGG--LFSVVGALcyAELGTTITKSGASYA-----Y 114
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGL-LIGYAIMGsiIYCVMQSL--GEMATFYPVVSGSFAtyasrF 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  115 ILEAFGGFIAFIrLWVSLLVVEPtgqaiIAITFANYIIQpsfpscdppYLACRLLAAACI----CLLTFVNCAYVKWGTR 190
Cdd:TIGR00913  78 VDPAFGFAVGWN-YWLQWLIVLP-----LELVTASMTIQ---------YWTDKVNPAVWIaifyVFIVIINLFGVKGYGE 142

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  191 VQDTFTYAKVVALIAIIVMGLVKLCQGHSEH-------FQD--AFEGSSWDMGNLSLA--LYSALFSYSGWDTLNFVTEE 259
Cdd:TIGR00913 143 AEFWFSSIKILAIIGFIILSIILNCGGGPNHgyigfryWHDpgAFAGGTIGGRFKGVCsvFVTAAFSFGGTELVALTAGE 222

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  260 IKNPERNLPLAIGISMPIVTLIYILT------NVAYY--TVLNISDVLSSDAVAVTFADQTFGM--FSWTIPIAVALSCF 329
Cdd:TIGR00913 223 AANPRKSIPRAAKRTFWRILVFYILTlfligfLVPYNdpRLLSSSSSSDSAASPFVIAIQNHGIkvLPHIFNAVILISVL 302

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  330 GGLNASIFASSRLFFVGSREGHLPDLLSMIHiERFTPIPALLFNCTMALIYLIV-----EDVFQ-LIN---YFSFSYWFF 400
Cdd:TIGR00913 303 SAANSSLYASSRTLYALAHQGLAPKIFAYVD-RRGVPYVAVIVSSLFGLLAFLAvskkeAEVFTwLLNisgLSGFFTWMC 381

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 115648063  401 VGLSvvgQLYLR--WKEPKRPR---PLK---------LSVFFPIVFCICSVFLVIVPLFTDTIN 450
Cdd:TIGR00913 382 ICLS---HIRFRkaMKAQGRSLdelPYKsqtgpygsyYALFFNILILIAQGYVAFAPVKFSAKS 442
PRK11021 PRK11021
putative transporter; Provisional
 45-371 5.73e-11

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 64.55  E-value: 5.73e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  45 ISLLNGVSLVVGNMIGSGIFVSPKgvLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYILEAFGGFIA 124
Cdd:PRK11021   1 LGLWQGIGLLSTSLLGTGVFAVPA--LAALVAGNNSLWAWPLLILLIFPIAIVFARLGRHFPHAGGPAHFVGMAFGPRLG 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 125 FIRLWVSLLVVePTGqAIIAITFANYIIQPSFPSCDPPYLACRLLAAAcicLLTFVNCAYVKWGTRVQDTFTYAkVVALI 204
Cdd:PRK11021  79 RVTGWLFLSVI-PVG-LPAALQIAAGFGQALFGWSSWQLLLAELLTLA---LLWLLNLRGASSSANLQTVIALL-IVALV 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 205 AIIVM-GLVKLCQGHSEHFQDAfegsswDMGNLSLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYI 283
Cdd:PRK11021 153 VAIWWaGDIKPADIPFPAPGSI------EWSGLFAALGVMFWCFVGIEAFAHLASEFKNPERDFPRALMIGLLLAGLVYW 226

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 284 LTNVAYYTVLNISDVLSSDAVAVTFADQTFG-MFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLLSMIHIE 362
Cdd:PRK11021 227 ACTVVVLHFPAYGDKQAAAASLPGIFVQLFGgYALWVICVIGYLACFASVNIYTQSFARLVWSQAREGRPPSYLARLSAR 306


                 ....*....
gi 115648063 363 RfTPIPALL 371
Cdd:PRK11021 307 G-VPVNALN 314
PRK10238 PRK10238
aromatic amino acid transporter AroP;
53-460 3.01e-10

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 62.28  E-value: 3.01e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  53 LVVGNMIGSGIFVSPKGVlVHTASYGMsLIVWAIGGLfsvVGALCYAELGTTITK-----SGASYAY-ILEAFGGFIAFI 126
Cdd:PRK10238  22 IALGGAIGTGLFLGSASV-IQSAGPGI-ILGYAIAGF---IAFLIMRQLGEMVVEepvagSFSHFAYkYWGSFAGFASGW 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 127 RLWVSLLVVeptgqAIIAITFANYIIQPSFPSCdPPYLAcrllAAACICLLTFVNCAYVKWGTRVQDTFTYAKVVALIAI 206
Cdd:PRK10238  97 NYWVLYVLV-----AMAELTAVGKYIQFWYPEI-PTWVS----AAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAM 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 207 IVMGLVKLCQGHSEhfQDAFEGSSWDMGN--------LSLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIV 278
Cdd:PRK10238 167 IIFGGWLLFSGNGG--PQATVSNLWDQGGflphgftgLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQVIYRI 244

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 279 TLIYILTNVAYYTVLNISDVLS-SDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPDLLS 357
Cdd:PRK10238 245 LIFYIGSLAVLLSLMPWTRVTAdTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALA 324

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 358 MIHiERFTPIPALLFNCTMALI-----YLIVEDVFQLINYFSFSYwFFVGLSVVGQLYLRWKEPKRPRPLKL---SVFFP 429
Cdd:PRK10238 325 SVD-KRGVPVNTILVSALVTALcvlinYLAPESAFGLLMALVVSA-LVINWAMISLAHMKFRRAKQEQGVVTrfpALLYP 402

                        410       420       430
                 ....*....|....*....|....*....|.
gi 115648063 430 IVFCICSVFLVIVPLFTdtinsLIGIGIALS 460
Cdd:PRK10238 403 LGNWICLLFMAAVLVIM-----LMTPGMAIS 428
potE PRK10655
putrescine transporter; Provisional
 39-372 1.35e-09

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 60.04  E-value: 1.35e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  39 MQLKKEISLLNGVSLVVGNMIGSGIFVSPKGVlvhtASYG-MSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYILE 117
Cdd:PRK10655   2 SAKSNKMGVVQLTILTAVNMMGSGIIMLPTKL----AQVGtISILSWLVTAVGSMALAYAFAKCGMFSRKSGGMGGYAEY 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 118 AFG---GFIAFIRLWVSLLVveptGQAIIAITFANYIiQPSFPSCdppylacrlLAAACICLLTFVncayVKWGTRVQDt 194
Cdd:PRK10655  78 AFGksgNFMANYTYGVSLLI----ANVAIAISAVGYG-TELFGAT---------LSPVQICLATIG----VLWLCTVAN- 138

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 195 FTYAKVVALI-AIIVMG----LVKLCQGHSEHFQDAFEGSSWDMGNLSL--ALYSA----LFSYSGWDTLNFVTEEIKNP 263
Cdd:PRK10655 139 FGGARITGQIsSVTVWGviipVVGLSIIGWFWFSPSLYVAAWNPHHLPFfsAVGSSiamtLWAFLGLESACANSDAVENP 218

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 264 ERNLPLAIGISMPIVTLIYIL-TNVAYYTVLNISDVLSSDAVAVTFADqtfgMFSWTIPIAVA----LSCFGGLNASIFA 338
Cdd:PRK10655 219 ERNVPIAVLGGTLGAAVIYIVsTNVIAGIVPNMELANSTAPFGLAFAQ----MFNPTVGKIVMalmvMSCCGSLLGWQFT 294

                        330       340       350
                 ....*....|....*....|....*....|....
gi 115648063 339 SSRLFFVGSREGHLPDLLSMIhIERFTPIPALLF 372
Cdd:PRK10655 295 IAQVFKSSADEGYFPKIFSRV-TKVDAPVQGMLI 327
PRK11387 PRK11387
S-methylmethionine permease;
31-370 8.38e-09

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 57.94  E-value: 8.38e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  31 PPQRSSETMQLKKEISLLNGVSLVVGNMIGSGIFVSPKGVLVHTASYGmSLIVWAIGGLFSVVGALCYAELGTTITKSGA 110
Cdd:PRK11387   2 PEPTSQQAGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAG-TLLAYLIGALVVYLVMQCLGELSVAMPETGA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 111 SYAYILEAFGGFIAFIRLWVSLLVVepTGQAIIAITFANYIIQPSFPSCdPPYLACRLLaaaciCLLTF-VNCAYVKWGT 189
Cdd:PRK11387  81 FHVYAARYLGPATGYTVAWLYWLTW--TVALGSSLTAAGFCMQYWFPQV-PVWPWCLLF-----CALIFgLNVVSTRFFA 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 190 RVQDTFTYAKVVALIAIIVMG------LVKLCQGHSEHFQDAFEGSSW-DMGNLS--LALYSALFSYSGWDTLNFVTEEI 260
Cdd:PRK11387 153 EGEFWFSLIKVVTILAFIVLGgaaifgFIPMQDGSPAPGLRNLTAEGWfPHGGLPilMTMVAVNFAFSGTELIGIAAGET 232

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 261 KNPERNLPLAIGISMPIVTLIYIltnvayYTVLNISDVLSSDAVAVTFADQTFGMFSWTIPIAVALSCF-------GGLN 333
Cdd:PRK11387 233 ENPAKVIPVAIRTTIARLVIFFV------GTVLVLAALIPMQQAGVEKSPFVLVFEKVGIPYAADIFNFviltailSAAN 306

                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 115648063 334 ASIFASSRLFFVGSREGHLPDLLSMIHiERFTPIPAL 370
Cdd:PRK11387 307 SGLYASGRMLWSLSNEGTLPACFARLT-KRGIPLTAL 342
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
56-382 1.82e-08

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 56.72  E-value: 1.82e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  56 GNMIGSGIFVSpKGVLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGA--SYA--YILEAFGGFIAFIRL--W 129
Cdd:COG0833   25 GGVIGTGLFLA-SGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSfqTYAtrFIDPAFGFAVGWNYWlnW 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 130 VSLLVVEPTGQAIIaitfanyiIQPSFPSCdPPYLACrllaAACICLLTFVNCAYVKWGTRVQDTFTYAKVVALIAIIVM 209
Cdd:COG0833  104 AITVAAELTAAGII--------MQYWFPDV-PVWIWS----LLFLALIFLLNALSVKAFGESEFWFSLIKVITVIAFIIV 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 210 GL---VKLCQGHSEHFQDAFEGSSWDMGNLS---LALYSALFSYSGwdtlnfvTE-------EIKNPERNLPLAI-GISM 275
Cdd:COG0833  171 GLlmiFGIIGGHAPGFSNFTTGDGPFPGGFLailGVMMIVGFSFQG-------TEligiaagESENPEKTIPKAIrQVFW 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 276 PIVtLIYILTNVA-----YYTVLNISD---VLSSDAVAVTFADqtfGMFSWTIPIAVaLSCfggLNASIFASSRLFFVGS 347
Cdd:COG0833  244 RIL-LFYILAIFViaaliPYTDAGVAEspfTLVFERAGIPYAA---DIMNAVILTAV-LSA---GNSGLYASTRMLWSLA 315

                        330       340       350
                 ....*....|....*....|....*....|....*
gi 115648063 348 REGHLPDLLSMIHiERFTPIPALLFNCTMALIYLI 382
Cdd:COG0833  316 KEGMAPKIFAKLN-KRGVPLNALLATMAVGLLALL 349
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
 84-390 1.02e-06

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 51.29  E-value: 1.02e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063   84 WAIGGLFSVVGALCYAELGTTITKSGASYAYIL----EAFGGFIAFIRLWVSLL----VVEPTGQAIIAITFANYIIQPS 155
Cdd:TIGR00907  53 WIIAGAGSICIALSLAELSSAYPTSGGQYFWSAklapPRQMPFASWMTGWFNLAgqvaGTASTDLSVAQLILGIVSLTTP 132

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  156 FPSCDPPYLACRLLAAACICLLTFVNCAYVKWGTRVQDTFTYAKVVALIAIIVMGLVKLCQGHSE------HFQDAFEGS 229
Cdd:TIGR00907 133 GREYIPTRWHIFGIMIGIHLIHALINSLPTKWLPRITSSAAYWSLLGFLTICITLLACKSPKFNDgkfvftNFNNSTGGW 212

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  230 SWDMGNLSLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAI--GISMPIVT-LIYILtnVAYYTVLNISDVLSSDA--- 303
Cdd:TIGR00907 213 KPGGFAFLLGLLNPAWSMTGYDGTAHMAEEIENPEVVGPRAIigAVAIGIVTgFCFNI--VLFFSMGDIDSLISSTTgqp 290

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  304 VAVTFADQT--------FGMFSWTIPIAVALSCfgglnasIFASSRLFFVGSREGHLP--DLLSMIHIERFTPIPALLFN 373
Cdd:TIGR00907 291 IAQIFYNALgnkagaifLLCLILVTSFFCAITC-------MTANSRMIYAFSRDGGLPfsPLWSRVNPRTQVPLNAVWLS 363

                         330       340
                  ....*....|....*....|.
gi 115648063  374 C----TMALIYLIVEDVFQLI 390
Cdd:TIGR00907 364 AvwiiLIGLLGLGSSTAFQAI 384
PRK15238 PRK15238
inner membrane transporter YjeM; Provisional
 233-304 3.00e-04

inner membrane transporter YjeM; Provisional


Pssm-ID: 237929 [Multi-domain]  Cd Length: 496  Bit Score: 43.39  E-value: 3.00e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 115648063 233 MGNLSLALYsALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNISDVLSSDAV 304
Cdd:PRK15238 211 IAVLSFVVF-AIFAYGGIEAVGGLVDKTENPEKNFPKGIIIAAIVISIGYSLAIFLWGVSTNWQQVLSNKSV 281
PRK10836 PRK10836
lysine transporter; Provisional
 33-353 6.18e-04

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 42.50  E-value: 6.18e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  33 QRSSETMQLKKEISLLNGVSLVVGNMIGSGIFVSpKGVLVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSG--A 110
Cdd:PRK10836   5 TKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVA-SGATISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGsfA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 111 SYA--YILEAFGgFIAFIRLWVSLLVVeptgqaiIAITF--ANYIIQPSFPscDPPYLACRLLAAACICLLTFVNcayVK 186
Cdd:PRK10836  84 TYGqnYVEEGFG-FALGWNYWYNWAVT-------IAVDLvaAQLVMSWWFP--DTPGWIWSALFLGVIFLLNYIS---VR 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 187 WGTRVQDTFTYAKVVALIAIIVMGL---VKLCQGhSEHFQdafeGSSWDMGNLSLAL-YSAL--------FSYSGWDTLN 254
Cdd:PRK10836 151 GFGEAEYWFSLIKVTTVIVFIIVGVlmiIGIFKG-AEPAG----WSNWTIGDAPFAGgFAAMigvamivgFSFQGTELIG 225

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 255 FVTEEIKNPERNLPLAI-----GISMPIVTLIYILTNVAYYTVLNI--SDVLSSDAVAVTFADQTFGMFS-WTIPIAVAL 326
Cdd:PRK10836 226 IAAGESEDPAKNIPRAVrqvfwRILLFYVFAILIISLIIPYTDPSLlrNDVKDISVSPFTLVFQHAGLLSaAAVMNAVIL 305

                        330       340
                 ....*....|....*....|....*...
gi 115648063 327 SC-FGGLNASIFASSRLFFVGSREGHLP 353
Cdd:PRK10836 306 TAvLSAGNSGMYASTRMLYTLACDGKAP 333
PRK10197 PRK10197
GABA permease;
53-383 2.80e-03

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 40.38  E-value: 2.80e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063  53 LVVGNMIGSGIFVspkGVLVHTASYGMS-LIVWAIGGLFSVVGALCYAELGTTITKSGASYAYILEAFGGF----IAFIR 127
Cdd:PRK10197   2 LSIAGVIGASLFV---GSSVAIAEAGPAvLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWagytIGWLY 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 128 LWVSLLVVePTGQAIIAITFANYIiqpsfpscdpPYLACRLLAAACICLLTFVNCAYVKWGTRVQDTFTYAKVVALIAII 207
Cdd:PRK10197  79 WWFWVLVI-PLEANIAAMILHSWV----------PGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFI 147

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 208 VMGLVKLcQGHSEHFQDAFEGSSWDMGNLS--------LALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIG-----IS 274
Cdd:PRK10197 148 FLGAVAI-SGFYPYAEVSGISRLWDSGGFMpngfgavlSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNsviwrIS 226

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115648063 275 MPIVTLIYILTNVAYYTVLNISDVLSSDAVAVTFadqTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPD 354
Cdd:PRK10197 227 IFYLCSIFVVVALIPWNMPGLKAVGSYRSVLELL---NIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPA 303

                        330       340
                 ....*....|....*....|....*....
gi 115648063 355 LLSMIHIERfTPIPALLFNCTMALIYLIV 383
Cdd:PRK10197 304 VMGKINRSK-TPYVAVLLSTGAAFLTVVV 331
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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