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Conserved domains on  [gi|238480879|ref|NP_001154261|]
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gibberellin 2-oxidase 8 [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN02393 super family cl33484
leucoanthocyanidin dioxygenase like protein
 25-110 7.67e-18

leucoanthocyanidin dioxygenase like protein


The actual alignment was detected with superfamily member PLN02393:

Pssm-ID: 215220 [Multi-domain]  Cd Length: 362  Bit Score: 78.16  E-value: 7.67e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238480879  25 SEIPFSFSVTAVVEEVELPVIDVSRLIDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDK 104
Cdd:PLN02393  35 SQRPNSSNTTSAPAEINIPVIDLSSLFSDDARLRDATLRAISEACREWGFFQVVNHGVRPELMDRAREAWREFFHLPLEV 114


                 ....*.
gi 238480879 105 KNISDN 110
Cdd:PLN02393 115 KQRYAN 120
 
Name Accession Description Interval E-value
PLN02393 PLN02393
leucoanthocyanidin dioxygenase like protein
 25-110 7.67e-18

leucoanthocyanidin dioxygenase like protein


Pssm-ID: 215220 [Multi-domain]  Cd Length: 362  Bit Score: 78.16  E-value: 7.67e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238480879  25 SEIPFSFSVTAVVEEVELPVIDVSRLIDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDK 104
Cdd:PLN02393  35 SQRPNSSNTTSAPAEINIPVIDLSSLFSDDARLRDATLRAISEACREWGFFQVVNHGVRPELMDRAREAWREFFHLPLEV 114


                 ....*.
gi 238480879 105 KNISDN 110
Cdd:PLN02393 115 KQRYAN 120
DIOX_N pfam14226
non-haem dioxygenase in morphine synthesis N-terminal; This is the highly conserved N-terminal ...
 42-105 4.17e-17

non-haem dioxygenase in morphine synthesis N-terminal; This is the highly conserved N-terminal region of proteins with 2-oxoglutarate/Fe(II)-dependent dioxygenase activity.


Pssm-ID: 464110 [Multi-domain]  Cd Length: 116  Bit Score: 71.93  E-value: 4.17e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 238480879   42 LPVIDVSRLIDgaEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKK 105
Cdd:pfam14226   1 IPVIDLSPLGD--PEDRAAVAAQLREACREWGFFQLVNHGVPEELIDELFEAAREFFALPLEEK 62
PcbC COG3491
Isopenicillin N synthase and related dioxygenases [Secondary metabolites biosynthesis, ...
 41-105 1.92e-13

Isopenicillin N synthase and related dioxygenases [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442714 [Multi-domain]  Cd Length: 320  Bit Score: 65.60  E-value: 1.92e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 238480879  41 ELPVIDVSRLIDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKK 105
Cdd:COG3491    6 SIPVIDLSPLRSGDPADRAAFAAELGEACREVGFFYVTGHGIPAELIDRLYAAARRFFALPEEEK 70
 
Name Accession Description Interval E-value
PLN02393 PLN02393
leucoanthocyanidin dioxygenase like protein
 25-110 7.67e-18

leucoanthocyanidin dioxygenase like protein


Pssm-ID: 215220 [Multi-domain]  Cd Length: 362  Bit Score: 78.16  E-value: 7.67e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238480879  25 SEIPFSFSVTAVVEEVELPVIDVSRLIDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDK 104
Cdd:PLN02393  35 SQRPNSSNTTSAPAEINIPVIDLSSLFSDDARLRDATLRAISEACREWGFFQVVNHGVRPELMDRAREAWREFFHLPLEV 114


                 ....*.
gi 238480879 105 KNISDN 110
Cdd:PLN02393 115 KQRYAN 120
DIOX_N pfam14226
non-haem dioxygenase in morphine synthesis N-terminal; This is the highly conserved N-terminal ...
 42-105 4.17e-17

non-haem dioxygenase in morphine synthesis N-terminal; This is the highly conserved N-terminal region of proteins with 2-oxoglutarate/Fe(II)-dependent dioxygenase activity.


Pssm-ID: 464110 [Multi-domain]  Cd Length: 116  Bit Score: 71.93  E-value: 4.17e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 238480879   42 LPVIDVSRLIDgaEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKK 105
Cdd:pfam14226   1 IPVIDLSPLGD--PEDRAAVAAQLREACREWGFFQLVNHGVPEELIDELFEAAREFFALPLEEK 62
PLN02758 PLN02758
oxidoreductase, 2OG-Fe(II) oxygenase family protein
 23-105 7.82e-15

oxidoreductase, 2OG-Fe(II) oxygenase family protein


Pssm-ID: 215404 [Multi-domain]  Cd Length: 361  Bit Score: 69.86  E-value: 7.82e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238480879  23 DVSEIPfSFSVTAVVEEVELPVIDVSRLIDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPF 102
Cdd:PLN02758  35 DMDERP-DLASDTLHAPDDIPVIDFSRLVKGDNDELFSEILKLRLACEEWGFFQVINHGIELELLEEIEKVAREFFMLPL 113


                 ...
gi 238480879 103 DKK 105
Cdd:PLN02758 114 EEK 116
PLN03178 PLN03178
leucoanthocyanidin dioxygenase; Provisional
 30-105 1.99e-14

leucoanthocyanidin dioxygenase; Provisional


Pssm-ID: 215614 [Multi-domain]  Cd Length: 360  Bit Score: 68.67  E-value: 1.99e-14
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 238480879  30 SFSVTAVVEEVELPVIDVSRLIDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKK 105
Cdd:PLN03178  36 VFEEEKKAAGPQVPVVDLSNIESDDEVVREACVEAVRAAAAEWGVMHLVGHGIPADLLDRVRKAGEAFFRLPIEEK 111
PcbC COG3491
Isopenicillin N synthase and related dioxygenases [Secondary metabolites biosynthesis, ...
 41-105 1.92e-13

Isopenicillin N synthase and related dioxygenases [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442714 [Multi-domain]  Cd Length: 320  Bit Score: 65.60  E-value: 1.92e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 238480879  41 ELPVIDVSRLIDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKK 105
Cdd:COG3491    6 SIPVIDLSPLRSGDPADRAAFAAELGEACREVGFFYVTGHGIPAELIDRLYAAARRFFALPEEEK 70
PLN02704 PLN02704
flavonol synthase
 41-107 3.64e-11

flavonol synthase


Pssm-ID: 166345 [Multi-domain]  Cd Length: 335  Bit Score: 59.41  E-value: 3.64e-11
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 238480879  41 ELPVIDVSrlidgaEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMR----------QEQIRVFREPFDKKNI 107
Cdd:PLN02704  42 QVPTIDLS------DPDEEKLTRLIAEASKEWGMFQIVNHGIPSEVISKLQkvgkeffelpQEEKEVYAKPPDSKSI 112
PLN02947 PLN02947
oxidoreductase
 40-105 6.19e-11

oxidoreductase


Pssm-ID: 215510 [Multi-domain]  Cd Length: 374  Bit Score: 58.60  E-value: 6.19e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 238480879  40 VELPVIDVSRLIDGaeeEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKK 105
Cdd:PLN02947  65 LKLPVIDLAELRGS---NRPHVLATLAAACREYGFFQVVNHGVPSEVIGGMIDVARRFFELPLEER 127
PLN02276 PLN02276
gibberellin 20-oxidase
 37-105 7.68e-11

gibberellin 20-oxidase


Pssm-ID: 215156 [Multi-domain]  Cd Length: 361  Bit Score: 58.44  E-value: 7.68e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 238480879  37 VEEVELPVIDVSRLIDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKK 105
Cdd:PLN02276  36 VPELAVPLIDLGGFLSGDEAATAEAARLVREACLKHGFFQVVNHGVDAALIRAAHEYMDAFFKLPLSEK 104
PLN02299 PLN02299
1-aminocyclopropane-1-carboxylate oxidase
 41-100 6.80e-10

1-aminocyclopropane-1-carboxylate oxidase


Pssm-ID: 215168 [Multi-domain]  Cd Length: 321  Bit Score: 55.55  E-value: 6.80e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 238480879  41 ELPVIDVSRLidgAEEEREKCKEAIARASREWGFFQVINHGIS---MDVLEKMRQEQIRVFRE 100
Cdd:PLN02299   6 SFPVIDMEKL---NGEERAATMELIKDACENWGFFELVNHGIShelMDEVEKMTKEHYKKCME 65
PLN02639 PLN02639
oxidoreductase, 2OG-Fe(II) oxygenase family protein
 36-105 2.57e-09

oxidoreductase, 2OG-Fe(II) oxygenase family protein


Pssm-ID: 178245 [Multi-domain]  Cd Length: 337  Bit Score: 54.01  E-value: 2.57e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238480879  36 VVEEVELPVIDVsrlidgAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKK 105
Cdd:PLN02639  32 VSTCENVPVIDL------GSPDRAQVVQQIGDACRRYGFFQVINHGVSAELVEKMLAVAHEFFRLPVEEK 95
PLN02403 PLN02403
aminocyclopropanecarboxylate oxidase
 40-92 3.30e-09

aminocyclopropanecarboxylate oxidase


Pssm-ID: 178025 [Multi-domain]  Cd Length: 303  Bit Score: 53.71  E-value: 3.30e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 238480879  40 VELPVIDVSRLiDGaeEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQ 92
Cdd:PLN02403   1 MEIPVIDFDQL-DG--EKRSKTMSLLHQACEKWGFFQVENHGIDKKLMEKVKQ 50
PLN02904 PLN02904
oxidoreductase
 39-110 7.70e-09

oxidoreductase


Pssm-ID: 178492 [Multi-domain]  Cd Length: 357  Bit Score: 52.64  E-value: 7.70e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 238480879  39 EVELPVIDVSRLIDGAEeeREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKKN--ISDN 110
Cdd:PLN02904  49 TITLPVIDLSLLHDPLL--RSCVIHEIEMACKGFGFFQVINHGIPSSVVKDALDAATRFFDLPVDEKMllVSDN 120
PTZ00273 PTZ00273
oxidase reductase; Provisional
 42-105 7.91e-09

oxidase reductase; Provisional


Pssm-ID: 140299 [Multi-domain]  Cd Length: 320  Bit Score: 52.84  E-value: 7.91e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 238480879  42 LPVIDVSRLIDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKK 105
Cdd:PTZ00273   6 LPVIDVSPLFGGESAEKMRVAKQIDEACRTWGFFYIVGHPIPQERIEKVLKMAKTFFSLPMEEK 69
PLN02216 PLN02216
protein SRG1
 19-105 9.34e-09

protein SRG1


Pssm-ID: 215129 [Multi-domain]  Cd Length: 357  Bit Score: 52.55  E-value: 9.34e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238480879  19 KKDNDVSEIPFSFSVtavveEVELPVIDVSRLIDGAEEEREKckEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVF 98
Cdd:PLN02216  35 RSDQDKTEIAVDSGL-----SSEIPIIDMKRLCSSTAMDSEV--EKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFF 107


                 ....*..
gi 238480879  99 REPFDKK 105
Cdd:PLN02216 108 NLPMEEK 114
PLN03176 PLN03176
flavanone-3-hydroxylase; Provisional
 41-105 2.80e-08

flavanone-3-hydroxylase; Provisional


Pssm-ID: 178720 [Multi-domain]  Cd Length: 120  Bit Score: 48.95  E-value: 2.80e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 238480879  41 ELPVIDVSRLIDGAEEEREKCKEaIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKK 105
Cdd:PLN03176  37 EIPVISIAGIDDGGEKRAEICNK-IVEACEEWGVFQIVDHGVDAKLVSEMTTLAKEFFALPPEEK 100
PLN02750 PLN02750
oxidoreductase, 2OG-Fe(II) oxygenase family protein
 41-104 4.09e-08

oxidoreductase, 2OG-Fe(II) oxygenase family protein


Pssm-ID: 178351 [Multi-domain]  Cd Length: 345  Bit Score: 50.74  E-value: 4.09e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 238480879  41 ELPVIDVSrlIDGAEEEREKCKEaIARASREWGFFQVINHGISMDvlekMRQEQIRVFREPFDK 104
Cdd:PLN02750  26 EIPVIDLS--VSTSHDKTEVASK-IGEACKKWGFFQVINHGVPSE----LRQRVEKVAKEFFDQ 82
PLN02156 PLN02156
gibberellin 2-beta-dioxygenase
 21-106 8.75e-08

gibberellin 2-beta-dioxygenase


Pssm-ID: 177816 [Multi-domain]  Cd Length: 335  Bit Score: 49.61  E-value: 8.75e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238480879  21 DNDVSEIPfsfsvTAVVEEVELPVIDVSRlidgaeeerEKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFRE 100
Cdd:PLN02156  11 DSNLYVNP-----KCKPVPVLIPVIDLTD---------SDAKTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAIGFFAL 76


                 ....*.
gi 238480879 101 PFDKKN 106
Cdd:PLN02156  77 PHSLKD 82
PLN02984 PLN02984
oxidoreductase, 2OG-Fe(II) oxygenase family protein
 37-105 9.56e-08

oxidoreductase, 2OG-Fe(II) oxygenase family protein


Pssm-ID: 215534 [Multi-domain]  Cd Length: 341  Bit Score: 49.48  E-value: 9.56e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 238480879  37 VEEVELPVIDVSRLidgaeeEREKCKEAiaraSREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKK 105
Cdd:PLN02984  34 SKDIDIPVIDMECL------DMEKLREA----CKDWGIFRLENHGIPLTLMSQLKEISESLLSLPFESK 92
PLN02997 PLN02997
flavonol synthase
 39-139 9.75e-08

flavonol synthase


Pssm-ID: 178576 [Multi-domain]  Cd Length: 325  Bit Score: 49.60  E-value: 9.75e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238480879  39 EVELPVIDVSrlidgAEEEREKCKEaIARASREWGFFQVINHGISMdvlEKMRQEQIrVFREPFD-----KKNISDNKDF 113
Cdd:PLN02997  30 AVDVPVVDLS-----VSDEDFLVRE-VVKASEEWGVFQVVNHGIPT---ELMRQLQM-VGKQFFElpeaeKETVAKEEDF 99

                         90       100
                 ....*....|....*....|....*.
gi 238480879 114 TTLRNfvnfkffNMLENIMDFLELIF 139
Cdd:PLN02997 100 EGYKR-------NYLGGINNWDEHLF 118
PLN02365 PLN02365
2-oxoglutarate-dependent dioxygenase
 38-105 1.51e-07

2-oxoglutarate-dependent dioxygenase


Pssm-ID: 177993 [Multi-domain]  Cd Length: 300  Bit Score: 49.02  E-value: 1.51e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 238480879  38 EEVELPVIDVsRLIDGAEEErekckeaIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKK 105
Cdd:PLN02365   2 AEVNIPTIDL-EEFPGQIEK-------LREACERWGCFRVVNHGVSLSLMAEMKKVVRSLFDLPDEVK 61
PLN00417 PLN00417
oxidoreductase, 2OG-Fe(II) oxygenase family protein
 35-105 2.74e-07

oxidoreductase, 2OG-Fe(II) oxygenase family protein


Pssm-ID: 177810 [Multi-domain]  Cd Length: 348  Bit Score: 48.41  E-value: 2.74e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 238480879  35 AVVEEVELPVIDVSRLIDGAEEEREKCKEaIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKK 105
Cdd:PLN00417  38 GAVPEMDIPAIDLSLLLSSSDDGREELSK-LHSALSTWGVVQVMNHGITEAFLDKIYKLTKQFFALPTEEK 107
PLN02515 PLN02515
naringenin,2-oxoglutarate 3-dioxygenase
 41-105 8.85e-07

naringenin,2-oxoglutarate 3-dioxygenase


Pssm-ID: 178130 [Multi-domain]  Cd Length: 358  Bit Score: 46.91  E-value: 8.85e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 238480879  41 ELPVIDVSRlIDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKK 105
Cdd:PLN02515  37 EIPVISLAG-IDEVGGRRGEICRKIVEACEDWGIFQVVDHGVDANLVADMTRLARDFFALPAEEK 100
PLN02485 PLN02485
oxidoreductase
 42-105 1.33e-06

oxidoreductase


Pssm-ID: 215267 [Multi-domain]  Cd Length: 329  Bit Score: 46.27  E-value: 1.33e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 238480879  42 LPVIDVSRLID-------GAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKK 105
Cdd:PLN02485   8 IPVIDISPLVAkcddpdmAEDPDVAEVVRQLDKACRDAGFFYVKGHGISDSLIKKVREVTHEFFELPYEEK 78
PLN02254 PLN02254
gibberellin 3-beta-dioxygenase
 25-105 1.37e-06

gibberellin 3-beta-dioxygenase


Pssm-ID: 215142 [Multi-domain]  Cd Length: 358  Bit Score: 46.23  E-value: 1.37e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238480879  25 SEIPFSFSVTAVVEEVELPVIDVSRlIDGAEeerekckeAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDK 104
Cdd:PLN02254  40 DDLLFSSAPSPSTTDESIPVIDLSD-PNALT--------LIGHACETWGVFQVTNHGIPLSLLDDIESQTRRLFSLPAQR 110


                 .
gi 238480879 105 K 105
Cdd:PLN02254 111 K 111
PLN02912 PLN02912
oxidoreductase, 2OG-Fe(II) oxygenase family protein
 21-137 6.85e-04

oxidoreductase, 2OG-Fe(II) oxygenase family protein


Pssm-ID: 178500 [Multi-domain]  Cd Length: 348  Bit Score: 38.47  E-value: 6.85e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238480879  21 DNDVSEIPFSF----SVTAVVEEVE-----LPVIDVSRLidgAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMR 91
Cdd:PLN02912  12 ASVVDHVPSNYvrpvSDRPNMSEVEtsgdsIPLIDLRDL---HGPNRADIINQFAHACSSYGFFQIKNHGVPEETIKKMM 88

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 238480879  92 QEQIRVFREPFD---KKNISDNKDFTTLRNFVNFKFFNMLeNIMDFLEL 137
Cdd:PLN02912  89 NVAREFFHQSEServKHYSADTKKTTRLSTSFNVSKEKVS-NWRDFLRL 136
PLN03002 PLN03002
oxidoreductase, 2OG-Fe(II) oxygenase family protein
 51-105 8.79e-04

oxidoreductase, 2OG-Fe(II) oxygenase family protein


Pssm-ID: 178579 [Multi-domain]  Cd Length: 332  Bit Score: 38.15  E-value: 8.79e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 238480879  51 IDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKK 105
Cdd:PLN03002  18 IDLANDDLNHSVASLKQACLDCGFFYVINHGINEEFMDDVFEQSKKFFALPLEEK 72
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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