NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|261278348|ref|NP_001159711|]
View 

cell growth regulator with EF hand domain protein 1 isoform a precursor [Homo sapiens]

Protein Classification

EF-hand domain-containing protein( domain architecture ID 12144783)

EF-hand (EFh) domain-containing protein may be involved in binding intracellular calcium and in calcium signal transduction

CATH:  1.10.238.10
Gene Ontology:  GO:0005509
PubMed:  2479149|10191494
SCOP:  3001983

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
2A1904 super family cl36772
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
 180-309 1.26e-08

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


The actual alignment was detected with superfamily member TIGR00927:

Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 56.16  E-value: 1.26e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261278348   180 ETQEAPGPREEAKGQVEARRESLDPVQEPGGQAEADGDVPGPR-GEAEGQAEA-------KGDAPGPRGEAGGQAEAEGD 251
Cdd:TIGR00927  647 EEGERPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERkGEQEGEGEIeakeadhKGETEAEEVEHEGETEAEGT 726

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 261278348   252 APGPRGEAGGQAEAEGDAPGPRGEAGGQAEARENGEEAKELPGETLESKNTQNDFEVH 309
Cdd:TIGR00927  727 EDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQ 784
EF-hand_7 pfam13499
EF-hand domain pair;
71-135 1.69e-04

EF-hand domain pair;


:

Pssm-ID: 463900 [Multi-domain]  Cd Length: 67  Bit Score: 39.16  E-value: 1.69e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 261278348   71 EQVLLYLFALHDYDQSGQLDGLELLSMLTAAlapGAANSPTTNPVilivDKVLETQDLNGDGLMT 135
Cdd:pfam13499   1 EEKLKEAFKLLDSDGDGYLDVEELKKLLRKL---EEGEPLSDEEV----EELFKEFDLDKDGRIS 58
 
Name Accession Description Interval E-value
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
 180-309 1.26e-08

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 56.16  E-value: 1.26e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261278348   180 ETQEAPGPREEAKGQVEARRESLDPVQEPGGQAEADGDVPGPR-GEAEGQAEA-------KGDAPGPRGEAGGQAEAEGD 251
Cdd:TIGR00927  647 EEGERPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERkGEQEGEGEIeakeadhKGETEAEEVEHEGETEAEGT 726

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 261278348   252 APGPRGEAGGQAEAEGDAPGPRGEAGGQAEARENGEEAKELPGETLESKNTQNDFEVH 309
Cdd:TIGR00927  727 EDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQ 784
PHA03169 PHA03169
hypothetical protein; Provisional
 180-296 2.46e-05

hypothetical protein; Provisional


Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 45.73  E-value: 2.46e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261278348 180 ETQEAPGPREEAKGQVEARRESLDPVQEPGGQAEA-----DGDVPGPRGEAEGQAEAKGDAPGPRGEAGGQAEAEGDAPG 254
Cdd:PHA03169 133 SHSPPPSPPSHPGPHEPAPPESHNPSPNQQPSSFLqpsheDSPEEPEPPTSEPEPDSPGPPQSETPTSSPPPQSPPDEPG 212

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 261278348 255 PRGEAGGQaeaegDAPGPRGEAGGQAEARENGEEAKELPGET 296
Cdd:PHA03169 213 EPQSPTPQ-----QAPSPNTQQAVEHEDEPTEPEREGPPFPG 249
EF-hand_7 pfam13499
EF-hand domain pair;
71-135 1.69e-04

EF-hand domain pair;


Pssm-ID: 463900 [Multi-domain]  Cd Length: 67  Bit Score: 39.16  E-value: 1.69e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 261278348   71 EQVLLYLFALHDYDQSGQLDGLELLSMLTAAlapGAANSPTTNPVilivDKVLETQDLNGDGLMT 135
Cdd:pfam13499   1 EEKLKEAFKLLDSDGDGYLDVEELKKLLRKL---EEGEPLSDEEV----EELFKEFDLDKDGRIS 58
 
Name Accession Description Interval E-value
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
 180-309 1.26e-08

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 56.16  E-value: 1.26e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261278348   180 ETQEAPGPREEAKGQVEARRESLDPVQEPGGQAEADGDVPGPR-GEAEGQAEA-------KGDAPGPRGEAGGQAEAEGD 251
Cdd:TIGR00927  647 EEGERPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERkGEQEGEGEIeakeadhKGETEAEEVEHEGETEAEGT 726

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 261278348   252 APGPRGEAGGQAEAEGDAPGPRGEAGGQAEARENGEEAKELPGETLESKNTQNDFEVH 309
Cdd:TIGR00927  727 EDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQ 784
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
 173-300 6.74e-07

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 50.76  E-value: 6.74e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261278348   173 AKSPLRQETQEAPGPREEAKG--------QVEARRESLDPVQEPGGQAEADGDVPGPRGEAEGQAEAKGDAPGPRGEAGG 244
Cdd:TIGR00927  657 GENGEESGGEAEQEGETETKGenesegeiPAERKGEQEGEGEIEAKEADHKGETEAEEVEHEGETEAEGTEDEGEIETGE 736

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 261278348   245 QAEAEGDAPGPRGEAGGQAEAEGDAPGPRGEAGGQAEARENGEEAKELPGETLESK 300
Cdd:TIGR00927  737 EGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMK 792
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
 159-299 5.89e-06

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 48.07  E-value: 5.89e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261278348   159 SPQEPQAVGRQSLLAKSPLRQETQEAPGPREEAKGQVEARRESLDPVQEPGGQAEADGDVPGPRGEAEGQAEAKGDAPGP 238
Cdd:TIGR00927  681 SEGEIPAERKGEQEGEGEIEAKEADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGD 760

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 261278348   239 RGEAGGQAEAEGDAPGPRGEAGGQAEAEGDAPGPRGEAGGQAEARENGEEAKELPGETLES 299
Cdd:TIGR00927  761 RKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSET 821
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
 150-317 9.74e-06

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 47.30  E-value: 9.74e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261278348   150 VEPGEPLAPSPQEPQAVGRQSLLAKSPLRQETQEAPGPREEAKGQVEARR-----ESLDPVQEPGGQAEADGDVPGPRGE 224
Cdd:TIGR00927  654 EAEGENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEadhkgETEAEEVEHEGETEAEGTEDEGEIE 733

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261278348   225 AEGQAEAKGDAPGPRGEAGGQAEAEGDAPGPRGEAGGQAEAEGDAPGPRGEAGGQAEARENGEEAKELPGETLESKNTQN 304
Cdd:TIGR00927  734 TGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKD 813

                          170
                   ....*....|...
gi 261278348   305 DFEVHIVQVENDE 317
Cdd:TIGR00927  814 EHEGQSETQADDT 826
PHA03169 PHA03169
hypothetical protein; Provisional
 180-296 2.46e-05

hypothetical protein; Provisional


Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 45.73  E-value: 2.46e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261278348 180 ETQEAPGPREEAKGQVEARRESLDPVQEPGGQAEA-----DGDVPGPRGEAEGQAEAKGDAPGPRGEAGGQAEAEGDAPG 254
Cdd:PHA03169 133 SHSPPPSPPSHPGPHEPAPPESHNPSPNQQPSSFLqpsheDSPEEPEPPTSEPEPDSPGPPQSETPTSSPPPQSPPDEPG 212

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 261278348 255 PRGEAGGQaeaegDAPGPRGEAGGQAEARENGEEAKELPGET 296
Cdd:PHA03169 213 EPQSPTPQ-----QAPSPNTQQAVEHEDEPTEPEREGPPFPG 249
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
 179-291 1.63e-04

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 43.45  E-value: 1.63e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261278348   179 QETQ-EAPGPREEAKGQVEARRESLDPVQ----EPGGQAEADGDVPGPRGEAEGQAEAKGDAPGPRGEAGGQAEAEGDAP 253
Cdd:TIGR00927  730 GEIEtGEEGEEVEDEGEGEAEGKHEVETEgdrkETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEHEGETEA 809

                           90       100       110
                   ....*....|....*....|....*....|....*...
gi 261278348   254 GPRGEAGGQAEAEGDAPGPRGEAGGQAEARENGEEAKE 291
Cdd:TIGR00927  810 GEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQ 847
EF-hand_7 pfam13499
EF-hand domain pair;
71-135 1.69e-04

EF-hand domain pair;


Pssm-ID: 463900 [Multi-domain]  Cd Length: 67  Bit Score: 39.16  E-value: 1.69e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 261278348   71 EQVLLYLFALHDYDQSGQLDGLELLSMLTAAlapGAANSPTTNPVilivDKVLETQDLNGDGLMT 135
Cdd:pfam13499   1 EEKLKEAFKLLDSDGDGYLDVEELKKLLRKL---EEGEPLSDEEV----EELFKEFDLDKDGRIS 58
PHA03169 PHA03169
hypothetical protein; Provisional
 148-295 2.25e-04

hypothetical protein; Provisional


Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 42.65  E-value: 2.25e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261278348 148 RHVEPGEPLAPSPQEPQAVGRQSLLAKsplrqeTQEAPGPREEAKGQVEARRESLDPVQEPGGQAEADGDVPGPRGEAEG 227
Cdd:PHA03169  36 RRGTAARAAKPAPPAPTTSGPQVRAVA------EQGHRQTESDTETAEESRHGEKEERGQGGPSGSGSESVGSPTPSPSG 109

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 261278348 228 QAEAKGDAPGPRGEAGGQAEAEGDAPGPRGEAGGQAEAEGDAPGPRGEAGGQAEARENGEEAKELPGE 295
Cdd:PHA03169 110 SAEELASGLSPENTSGSSPESPASHSPPPSPPSHPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSPEE 177
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
 179-305 3.61e-04

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 42.29  E-value: 3.61e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261278348   179 QETQEAPGPREEAKGQVEARRESLDpvQEPGGQAEADGDVPGPRGEAEGQAEAKGDAPGPRGEAGGQAEAEGDA--PGPR 256
Cdd:TIGR00927  718 EGETEAEGTEDEGEIETGEEGEEVE--DEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGemKGDE 795

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*....
gi 261278348   257 GEAGGQAEAEGDAPGPRGEAGGQAEARENGEEAKELPGETLESKNTQND 305
Cdd:TIGR00927  796 GAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGE 844
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
 203-303 4.08e-04

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 42.29  E-value: 4.08e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261278348   203 DPVQEPGGQAEADGDVPGprGEAEGQAEAKGD---------APGPRGEAGGQAEAEGDAPgprGEAGGQAEAEGDAPGPR 273
Cdd:TIGR00927  629 DLSKGDVAEAEHTGERTG--EEGERPTEAEGEngeesggeaEQEGETETKGENESEGEIP---AERKGEQEGEGEIEAKE 703

                           90       100       110
                   ....*....|....*....|....*....|
gi 261278348   274 GEAGGQAEARENGEEAKELPGETLESKNTQ 303
Cdd:TIGR00927  704 ADHKGETEAEEVEHEGETEAEGTEDEGEIE 733
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
 180-291 9.81e-04

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 40.75  E-value: 9.81e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261278348   180 ETQEAPGPREEAKGQVEARRESLDPVQEPGGQAEADGDVPGPRGEAEGQAEAKGDAPGPRGEAGGQAEAEGDAPGPRGEA 259
Cdd:TIGR00927  753 HEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDET 832

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|..
gi 261278348   260 GGQ---AEAEGDAP-------GPRGEAGGQAEARENGEEAKE 291
Cdd:TIGR00927  833 GEQelnAENQGEAKqdekgvdGGGGSDGGDSEEEEEEEEEEE 874
PHA03169 PHA03169
hypothetical protein; Provisional
 179-309 1.01e-03

hypothetical protein; Provisional


Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 40.34  E-value: 1.01e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261278348 179 QETQEAPGPREEAKGQVEARRESLDPVQEPGGQAEADGDVPGPRGEAEGQAEAKGDAP----GPRGEAGGQAEAEGDAPG 254
Cdd:PHA03169 112 EELASGLSPENTSGSSPESPASHSPPPSPPSHPGPHEPAPPESHNPSPNQQPSSFLQPshedSPEEPEPPTSEPEPDSPG 191

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 261278348 255 P----RGEAGGQAEAEGDAPGPRGEAGGQAEARENGEEAKELPGETLESKNTQNDFEVH 309
Cdd:PHA03169 192 PpqseTPTSSPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHEDEPTEPEREGPPFPGH 250
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 135-296 1.34e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 40.35  E-value: 1.34e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261278348 135 TPAELINFPGVALRHVEPGEPLAPSPQEPQAVGRQSLLAKSPLRQETQEAPGPREEAKGQVEARRESLDPVQEPGGQAEA 214
Cdd:PRK07764 637 AEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADD 716

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261278348 215 DGdvPGPRGEAEGQAEAKGDAPGPRGEAGGQAEAEGDAPGPRGEAGGQAEAEGDAPGPRGEAGGQAEARENGEEAKELPG 294
Cdd:PRK07764 717 PA--AQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMD 794


                 ..
gi 261278348 295 ET 296
Cdd:PRK07764 795 DE 796
PHA03169 PHA03169
hypothetical protein; Provisional
 182-295 1.70e-03

hypothetical protein; Provisional


Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 39.95  E-value: 1.70e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261278348 182 QEAPGPREEAKGQVEARRESLDPVQEPGGQAEADGDVPGPRGEAEGQAEAKGDAPGPRGEAGGQAEAEGDAPGPRGEAGG 261
Cdd:PHA03169  98 ESVGSPTPSPSGSAEELASGLSPENTSGSSPESPASHSPPPSPPSHPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSPEE 177

                         90       100       110
                 ....*....|....*....|....*....|....
gi 261278348 262 QAEAEGDAPgPRGEAGGQAEARENGEEAKELPGE 295
Cdd:PHA03169 178 PEPPTSEPE-PDSPGPPQSETPTSSPPPQSPPDE 210
PHA02664 PHA02664
hypothetical protein; Provisional
 147-269 9.13e-03

hypothetical protein; Provisional


Pssm-ID: 177447  Cd Length: 534  Bit Score: 37.67  E-value: 9.13e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261278348 147 LRHVEPGEP------LAPSPQEPQA--VGRQSLLAKSPLRQETQEAPGPREEAKGQ-VEARRESLDPVQEPGGQAEADGD 217
Cdd:PHA02664 349 MVYVPPEEPrmdglcVFPTPAEPAAlfVDGNEVIAAGAAAAMIAAAERAANGARGSpMAAPEEGRAAAAAAAANAPADQD 428

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 261278348 218 VpgprgEAEGQAEAKGDAPGPRGEAGGQAEAEGDAPGPRGEAGGQAEAEGDA 269
Cdd:PHA02664 429 V-----EAEAHDEFDQDPGAPAHADRADSDEDDMDEQESGDERADGEDDSDS 475
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH