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Conserved domains on  [gi|442615123|ref|NP_001259228|]
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uncharacterized protein Dmel_CG43689, isoform C [Drosophila melanogaster]

Protein Classification

C2HC-type zinc finger protein( domain architecture ID 10479131)

C2HC-type zinc finger protein similar to Caenorhabditis elegans zinc finger protein ztf-11, a transcriptional repressor which promotes neuronal differentiation during embryonic and postembryonic neurogenesis

CATH:  4.10.320.30
Gene Ontology:  GO:0008270|GO:0006355
PubMed:  1280325|12665246
SCOP:  4003606

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
zf-C2HC pfam01530
Zinc finger, C2HC type; This is a DNA binding zinc finger domain.
 1189-1217 7.63e-15

Zinc finger, C2HC type; This is a DNA binding zinc finger domain.


:

Pssm-ID: 460240  Cd Length: 29  Bit Score: 69.10  E-value: 7.63e-15
                           10        20
                   ....*....|....*....|....*....
gi 442615123  1189 KCPTPGCDGSGHVTGNYSSHRSLSGCPRA 1217
Cdd:pfam01530    1 KCPTPGCDGSGHVSGKYATHRSLSGCPYA 29
zf-C2HC pfam01530
Zinc finger, C2HC type; This is a DNA binding zinc finger domain.
 1234-1262 6.15e-12

Zinc finger, C2HC type; This is a DNA binding zinc finger domain.


:

Pssm-ID: 460240  Cd Length: 29  Bit Score: 61.01  E-value: 6.15e-12
                           10        20
                   ....*....|....*....|....*....
gi 442615123  1234 RCPIPGCDGSGHSTGKFLSHRSASGCPIA 1262
Cdd:pfam01530    1 KCPTPGCDGSGHVSGKYATHRSLSGCPYA 29
zf-C2HC pfam01530
Zinc finger, C2HC type; This is a DNA binding zinc finger domain.
 438-466 2.23e-11

Zinc finger, C2HC type; This is a DNA binding zinc finger domain.


:

Pssm-ID: 460240  Cd Length: 29  Bit Score: 59.47  E-value: 2.23e-11
                           10        20
                   ....*....|....*....|....*....
gi 442615123   438 KCPTPGCNGRGHVQPHRSVHRSLSGCPRA 466
Cdd:pfam01530    1 KCPTPGCDGSGHVSGKYATHRSLSGCPYA 29
 
Name Accession Description Interval E-value
zf-C2HC pfam01530
Zinc finger, C2HC type; This is a DNA binding zinc finger domain.
 1189-1217 7.63e-15

Zinc finger, C2HC type; This is a DNA binding zinc finger domain.


Pssm-ID: 460240  Cd Length: 29  Bit Score: 69.10  E-value: 7.63e-15
                           10        20
                   ....*....|....*....|....*....
gi 442615123  1189 KCPTPGCDGSGHVTGNYSSHRSLSGCPRA 1217
Cdd:pfam01530    1 KCPTPGCDGSGHVSGKYATHRSLSGCPYA 29
zf-C2HC pfam01530
Zinc finger, C2HC type; This is a DNA binding zinc finger domain.
 1234-1262 6.15e-12

Zinc finger, C2HC type; This is a DNA binding zinc finger domain.


Pssm-ID: 460240  Cd Length: 29  Bit Score: 61.01  E-value: 6.15e-12
                           10        20
                   ....*....|....*....|....*....
gi 442615123  1234 RCPIPGCDGSGHSTGKFLSHRSASGCPIA 1262
Cdd:pfam01530    1 KCPTPGCDGSGHVSGKYATHRSLSGCPYA 29
zf-C2HC pfam01530
Zinc finger, C2HC type; This is a DNA binding zinc finger domain.
 438-466 2.23e-11

Zinc finger, C2HC type; This is a DNA binding zinc finger domain.


Pssm-ID: 460240  Cd Length: 29  Bit Score: 59.47  E-value: 2.23e-11
                           10        20
                   ....*....|....*....|....*....
gi 442615123   438 KCPTPGCNGRGHVQPHRSVHRSLSGCPRA 466
Cdd:pfam01530    1 KCPTPGCDGSGHVSGKYATHRSLSGCPYA 29
 
Name Accession Description Interval E-value
zf-C2HC pfam01530
Zinc finger, C2HC type; This is a DNA binding zinc finger domain.
 1189-1217 7.63e-15

Zinc finger, C2HC type; This is a DNA binding zinc finger domain.


Pssm-ID: 460240  Cd Length: 29  Bit Score: 69.10  E-value: 7.63e-15
                           10        20
                   ....*....|....*....|....*....
gi 442615123  1189 KCPTPGCDGSGHVTGNYSSHRSLSGCPRA 1217
Cdd:pfam01530    1 KCPTPGCDGSGHVSGKYATHRSLSGCPYA 29
zf-C2HC pfam01530
Zinc finger, C2HC type; This is a DNA binding zinc finger domain.
 1234-1262 6.15e-12

Zinc finger, C2HC type; This is a DNA binding zinc finger domain.


Pssm-ID: 460240  Cd Length: 29  Bit Score: 61.01  E-value: 6.15e-12
                           10        20
                   ....*....|....*....|....*....
gi 442615123  1234 RCPIPGCDGSGHSTGKFLSHRSASGCPIA 1262
Cdd:pfam01530    1 KCPTPGCDGSGHVSGKYATHRSLSGCPYA 29
zf-C2HC pfam01530
Zinc finger, C2HC type; This is a DNA binding zinc finger domain.
 438-466 2.23e-11

Zinc finger, C2HC type; This is a DNA binding zinc finger domain.


Pssm-ID: 460240  Cd Length: 29  Bit Score: 59.47  E-value: 2.23e-11
                           10        20
                   ....*....|....*....|....*....
gi 442615123   438 KCPTPGCNGRGHVQPHRSVHRSLSGCPRA 466
Cdd:pfam01530    1 KCPTPGCDGSGHVSGKYATHRSLSGCPYA 29
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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