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Conserved domains on  [gi|808357062|ref|NP_001294059|]
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UNC93-like protein MFSD11 [Caenorhabditis elegans]

Protein Classification

MFS transporter( domain architecture ID 10532250)

major facilitator superfamily (MFS) transporter similar to UNC93-like protein MFSD11, a putative solute carrier (SLC) that might be involved in the energy regulation

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
UNC-93 pfam05978
Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 ...
45-427 2.82e-148

Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 from Caenorhabditis elegans and also includes protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain- containing protein 11 or protein ET). UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. UNC-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons.


:

Pssm-ID: 461792 [Multi-domain]  Cd Length: 379  Bit Score: 427.12  E-value: 2.82e-148
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062   45 SPDTISAYAGYYGAAFHLSAFAVFSLITPSLQHFVPSKWFLTLASALFAVYYLGFFQLNKYYFYLTQALMGVGYSFYNNG 124
Cdd:pfam05978   1 SPGGISAYAGYYSLAIIYFFFTFACLIAPSIVDKLTPKWSMVIGAACYAIFQLGFLFLNSYYLYFSSALLGFGAAFLWTG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062  125 EGQYLSEHSSRRTIESNTGIETAVGHASMFFGGIalivLCFLLHTDGGTGIEYSDLQIRFIYGTMFILNIFSVIVFAFLP 204
Cdd:pfam05978  81 QGSYLSENSTRETIERNTSISWAMLQSSLIGGGI----FLFIVFQSGGQGDEISDGQIKLLYSVFTAISIVGIVVFAFLP 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062  205 TKQYDSIASKSSTVvPSFANQIKQLLKAFQSTNLLILMPFFFFQGFAVSFLMTVYPTTLSFTHAFKTDI-YIIGIYSVSM 283
Cdd:pfam05978 157 SPDYENVLSSKEKI-QSFADQFKSTFRLLRTPKMLLLAVFFFYTGLEVSFWTSIYPTCISFTSKLGTNTtYLIAIYSIST 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062  284 GLAEAIGGIFLRPLLKRAGDYGLYVTAGFNFLSYSVVIILAFLSIPNLSTFGPTSSPPIFLTPSRLLVFIIGFLIGFSDF 363
Cdd:pfam05978 236 GLGQIIGGIFFGPLGKRIRKFGRDPTILLGTLLHLVYFILIYLSFPNDAPLHPTDGPGLLITPSLYLAFIISFLLGFSDA 315
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 808357062  364 CVTMARAVICQVAVPDCRMQVFSLSKLYQSGSSVVVLLLTPYMTIYIWLCVLTIFLLIGTTCFV 427
Cdd:pfam05978 316 CWNTQIYSILADAYPEDSSQAFAVFKFYQSIASCVAFFYSPYLTLYWHLLILTIFSIFATICFF 379
 
Name Accession Description Interval E-value
UNC-93 pfam05978
Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 ...
45-427 2.82e-148

Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 from Caenorhabditis elegans and also includes protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain- containing protein 11 or protein ET). UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. UNC-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons.


Pssm-ID: 461792 [Multi-domain]  Cd Length: 379  Bit Score: 427.12  E-value: 2.82e-148
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062   45 SPDTISAYAGYYGAAFHLSAFAVFSLITPSLQHFVPSKWFLTLASALFAVYYLGFFQLNKYYFYLTQALMGVGYSFYNNG 124
Cdd:pfam05978   1 SPGGISAYAGYYSLAIIYFFFTFACLIAPSIVDKLTPKWSMVIGAACYAIFQLGFLFLNSYYLYFSSALLGFGAAFLWTG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062  125 EGQYLSEHSSRRTIESNTGIETAVGHASMFFGGIalivLCFLLHTDGGTGIEYSDLQIRFIYGTMFILNIFSVIVFAFLP 204
Cdd:pfam05978  81 QGSYLSENSTRETIERNTSISWAMLQSSLIGGGI----FLFIVFQSGGQGDEISDGQIKLLYSVFTAISIVGIVVFAFLP 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062  205 TKQYDSIASKSSTVvPSFANQIKQLLKAFQSTNLLILMPFFFFQGFAVSFLMTVYPTTLSFTHAFKTDI-YIIGIYSVSM 283
Cdd:pfam05978 157 SPDYENVLSSKEKI-QSFADQFKSTFRLLRTPKMLLLAVFFFYTGLEVSFWTSIYPTCISFTSKLGTNTtYLIAIYSIST 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062  284 GLAEAIGGIFLRPLLKRAGDYGLYVTAGFNFLSYSVVIILAFLSIPNLSTFGPTSSPPIFLTPSRLLVFIIGFLIGFSDF 363
Cdd:pfam05978 236 GLGQIIGGIFFGPLGKRIRKFGRDPTILLGTLLHLVYFILIYLSFPNDAPLHPTDGPGLLITPSLYLAFIISFLLGFSDA 315
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 808357062  364 CVTMARAVICQVAVPDCRMQVFSLSKLYQSGSSVVVLLLTPYMTIYIWLCVLTIFLLIGTTCFV 427
Cdd:pfam05978 316 CWNTQIYSILADAYPEDSSQAFAVFKFYQSIASCVAFFYSPYLTLYWHLLILTIFSIFATICFF 379
MFS_MFSD11 cd17407
UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed ...
15-429 2.36e-37

UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed of UNC93-like protein MFSD11 (also called major facilitator superfamily domain-containing protein 11 or protein ET) and similar proteins, most of which are uncharacterized. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons. Its expression is affected by altered energy homeostasis, suggesting plausible involvement in the energy regulation. MFSD11 belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340965  Cd Length: 387  Bit Score: 140.47  E-value: 2.36e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062  15 LLGIGTLFLYTGYSLQQFIGESVIHSIHEksPDTISAYAGYYGAAFHLSAFAVFSLITPSLQHFVPSKWFLTLASALFAV 94
Cdd:cd17407    3 ILGVAFMFIFTAFQTCGNIEQTVIKSLNQ--GNTTFHGSGYTSLAIIYGVFAASNWIAPSVVAVIGPKWSMVVGGLTYSL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062  95 YYLGFFQLNKYYFYLTQALMGVGYSFYNNGEGQYLSEHSSRRTIESNTGIETAVGHASMFFGGIALIvlcFLLHtdGGTG 174
Cdd:cd17407   81 FIASFIQPMTWSLYTASVLLGIGAAVLWTGQGNFLTINSDSETIGRNSGIFWALLQCSLLFGNLYVY---FAFQ--GKTT 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062 175 IEYSDLQIrfIYGTMFILNIFSVIVFAFLPTkqydsiasksstvvpsfanqikqllKAFQSTNLLILMPFFFFQGFAVSF 254
Cdd:cd17407  156 ISDHDRRT--VFIVLTVISLVGVVLLFLLRK-------------------------PPSEPKEMLLLSVTFAYTGLELTF 208
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062 255 LMTVYPTTLSFTHAFKTDIY-IIGIYSVSMGLAEAIGGIFLRPLLKRAGDYGLYVTAGFNFLSYSVVIILAFLSIPNLST 333
Cdd:cd17407  209 FSGVYGTCIGNTNKFGEDAKsLIGLSGIFIGIGEILGGGLFGILGKKTNRFGRDPIVLLGFVVHLIAFYLIFLNIPSDAP 288
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062 334 FGPTSSPPIFLTPSRLLVFIIGFLIGFSDFCVTMARAVICQVAVPDCRMQVFSLSKLYQSGSSVVVLLLTPYMTIYIWLC 413
Cdd:cd17407  289 IAEGTNDSAYIEPSAYVALFCSFLLGFGDSCFNTQIYSILGFMYPEDSAPAFALFKFVQSIAAAIAFFYSNYLLLQWQLL 368
                        410
                 ....*....|....*.
gi 808357062 414 VLTIFLLIGTTCFVIV 429
Cdd:cd17407  369 ILVVFGFLGTISFFLV 384
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
4-387 4.30e-03

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 39.19  E-value: 4.30e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062   4 TPRRHELLSTYLLGIGTLFLYTGYSLQQFIGESVIHSIHEkSPDTISAYAGYYGAAFhlsafAVFSLITPSLQHFVPSKW 83
Cdd:COG2814    3 ATPRRRWLALLALALGAFLSGLGIGIVLPALPLIAADLGA-SPAQAGLVVTAYLLGA-----ALGAPLAGRLADRFGRRR 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062  84 FLTLASALFAVYYLGFFQLNKYY-FYLTQALMGVGYSFYNNGEGQYLSEHSSRRTIESNTGIETAVGHASMFFGGIALIV 162
Cdd:COG2814   77 VLLLGLLLFALGSLLCALAPSLWlLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGL 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062 163 LCFLLHtdggtgieysdlqirfiYGTMFILNIFSVIVFAFLptkqydSIASKSSTVVPSFANQIKQLLKAFQSTNLLILM 242
Cdd:COG2814  157 LADLFG-----------------WRWVFLVNAVLALLALLL------LLRLLPESRPAARARLRGSLRELLRRPRLLLLL 213
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062 243 PFFFFQGFAVSFLMTVYPTTLsfTHAFKTDIYIIGIYSVSMGLAEAIGGIFLRPLLKRAGdyglyvtagfnflSYSVVII 322
Cdd:COG2814  214 LLAFLLGFGFFALFTYLPLYL--QEVLGLSASAAGLLLALFGLGGVLGALLAGRLADRFG-------------RRRLLLI 278
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 808357062 323 LAFLSIPNLSTFGPTSSPPIFLtpsrLLVFIIGFLIGFSdfcVTMARAVICQVAVPDCRMQVFSL 387
Cdd:COG2814  279 GLLLLALGLLLLALAGSLWLLL----LALFLLGFGFGLL---FPLLQALVAELAPPEARGRASGL 336
 
Name Accession Description Interval E-value
UNC-93 pfam05978
Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 ...
45-427 2.82e-148

Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 from Caenorhabditis elegans and also includes protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain- containing protein 11 or protein ET). UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. UNC-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons.


Pssm-ID: 461792 [Multi-domain]  Cd Length: 379  Bit Score: 427.12  E-value: 2.82e-148
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062   45 SPDTISAYAGYYGAAFHLSAFAVFSLITPSLQHFVPSKWFLTLASALFAVYYLGFFQLNKYYFYLTQALMGVGYSFYNNG 124
Cdd:pfam05978   1 SPGGISAYAGYYSLAIIYFFFTFACLIAPSIVDKLTPKWSMVIGAACYAIFQLGFLFLNSYYLYFSSALLGFGAAFLWTG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062  125 EGQYLSEHSSRRTIESNTGIETAVGHASMFFGGIalivLCFLLHTDGGTGIEYSDLQIRFIYGTMFILNIFSVIVFAFLP 204
Cdd:pfam05978  81 QGSYLSENSTRETIERNTSISWAMLQSSLIGGGI----FLFIVFQSGGQGDEISDGQIKLLYSVFTAISIVGIVVFAFLP 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062  205 TKQYDSIASKSSTVvPSFANQIKQLLKAFQSTNLLILMPFFFFQGFAVSFLMTVYPTTLSFTHAFKTDI-YIIGIYSVSM 283
Cdd:pfam05978 157 SPDYENVLSSKEKI-QSFADQFKSTFRLLRTPKMLLLAVFFFYTGLEVSFWTSIYPTCISFTSKLGTNTtYLIAIYSIST 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062  284 GLAEAIGGIFLRPLLKRAGDYGLYVTAGFNFLSYSVVIILAFLSIPNLSTFGPTSSPPIFLTPSRLLVFIIGFLIGFSDF 363
Cdd:pfam05978 236 GLGQIIGGIFFGPLGKRIRKFGRDPTILLGTLLHLVYFILIYLSFPNDAPLHPTDGPGLLITPSLYLAFIISFLLGFSDA 315
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 808357062  364 CVTMARAVICQVAVPDCRMQVFSLSKLYQSGSSVVVLLLTPYMTIYIWLCVLTIFLLIGTTCFV 427
Cdd:pfam05978 316 CWNTQIYSILADAYPEDSSQAFAVFKFYQSIASCVAFFYSPYLTLYWHLLILTIFSIFATICFF 379
MFS_MFSD11 cd17407
UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed ...
15-429 2.36e-37

UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed of UNC93-like protein MFSD11 (also called major facilitator superfamily domain-containing protein 11 or protein ET) and similar proteins, most of which are uncharacterized. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons. Its expression is affected by altered energy homeostasis, suggesting plausible involvement in the energy regulation. MFSD11 belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340965  Cd Length: 387  Bit Score: 140.47  E-value: 2.36e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062  15 LLGIGTLFLYTGYSLQQFIGESVIHSIHEksPDTISAYAGYYGAAFHLSAFAVFSLITPSLQHFVPSKWFLTLASALFAV 94
Cdd:cd17407    3 ILGVAFMFIFTAFQTCGNIEQTVIKSLNQ--GNTTFHGSGYTSLAIIYGVFAASNWIAPSVVAVIGPKWSMVVGGLTYSL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062  95 YYLGFFQLNKYYFYLTQALMGVGYSFYNNGEGQYLSEHSSRRTIESNTGIETAVGHASMFFGGIALIvlcFLLHtdGGTG 174
Cdd:cd17407   81 FIASFIQPMTWSLYTASVLLGIGAAVLWTGQGNFLTINSDSETIGRNSGIFWALLQCSLLFGNLYVY---FAFQ--GKTT 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062 175 IEYSDLQIrfIYGTMFILNIFSVIVFAFLPTkqydsiasksstvvpsfanqikqllKAFQSTNLLILMPFFFFQGFAVSF 254
Cdd:cd17407  156 ISDHDRRT--VFIVLTVISLVGVVLLFLLRK-------------------------PPSEPKEMLLLSVTFAYTGLELTF 208
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062 255 LMTVYPTTLSFTHAFKTDIY-IIGIYSVSMGLAEAIGGIFLRPLLKRAGDYGLYVTAGFNFLSYSVVIILAFLSIPNLST 333
Cdd:cd17407  209 FSGVYGTCIGNTNKFGEDAKsLIGLSGIFIGIGEILGGGLFGILGKKTNRFGRDPIVLLGFVVHLIAFYLIFLNIPSDAP 288
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062 334 FGPTSSPPIFLTPSRLLVFIIGFLIGFSDFCVTMARAVICQVAVPDCRMQVFSLSKLYQSGSSVVVLLLTPYMTIYIWLC 413
Cdd:cd17407  289 IAEGTNDSAYIEPSAYVALFCSFLLGFGDSCFNTQIYSILGFMYPEDSAPAFALFKFVQSIAAAIAFFYSNYLLLQWQLL 368
                        410
                 ....*....|....*.
gi 808357062 414 VLTIFLLIGTTCFVIV 429
Cdd:cd17407  369 ILVVFGFLGTISFFLV 384
MFS_unc93_like cd17338
Unc-93 family of the Major Facilitator Superfamily of transporters; The Unc-93 family is ...
13-426 1.01e-15

Unc-93 family of the Major Facilitator Superfamily of transporters; The Unc-93 family is composed of Caenorhabditis elegans uncoordinated protein 93 (also called putative potassium channel regulatory protein unc-93) and similar proteins including three vertebrate members: protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain-containing protein 11 or protein ET). Unc-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. The human UNC93A gene is located in a region of the genome that is frequently associated with ovarian cancer, however, there is no evidence that UNC93A has a tumor suppressor function. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons. The unc93-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340896 [Multi-domain]  Cd Length: 388  Bit Score: 78.54  E-value: 1.01e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062  13 TYLLGIGTLFLYTGYSLQQfigeSVIHSIHEKSPDTISAYAGYygaafhlSAFAVFSLITPSLQHFVPSKWFLTLASALF 92
Cdd:cd17338    1 VIILSFGFLLIFLAYSALQ----NLQTSLHENGLGSISLGILY-------SSFAVSSFIAPLLVKLLGEKITLVLGGLGY 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062  93 AVYYLGFFQLNKYYFYLTQALMGVGYSFYNNGEGQYLSEHSSRRTIESNTGIETAVGHASMFFGgiALIVLCFLLHTDGG 172
Cdd:cd17338   70 AIFIASNIFPIWGTLVPASIILGFAAAILWTAQGTYITRISDESNIGRNFGIFWSIFQLSQVFG--NLISLALLNHSKGS 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062 173 TGieysdlqIRFIYGTMFILNIFSVIVFAFLPTKQYDSIA---SKSSTVVPSFANQIKQLLKAFQSTNLLILMPFFFFQG 249
Cdd:cd17338  148 SG-------TTILFIVFMAIMLVGIILLFFLRGPDNEVITeieSSSVGESMEKKNLFKLPFTLLKDKRFLLLIPLLIYSG 220
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062 250 FAVSFLMTVYPTTLSfthAFKTDIYIIGIYSVSMGLAEAIGG-IFLRPLLKRAGDYGLYVTAGFNFLSYSVVIILAFLSI 328
Cdd:cd17338  221 LEQTFFSGVFTLIIG---TPTTGIARVGYVMAVYGFGDALGSlVAGLLSDWRFGRIVLAVIGAFVHIASLILLFLSGNVT 297
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062 329 PnlstfgptssppiFLTPSRLLVFIIGFLIGFSDFCVTMARAVICQVAVPDCRMQVFSLSKLYQSGSSVVVLLLTPYMTI 408
Cdd:cd17338  298 P-------------YGLGGSWLAYVSAILWGLGDAIFNTQIYALLGSLYENDSESAFAVYKLWQSIATAIAYFLSPYLPL 364
                        410
                 ....*....|....*...
gi 808357062 409 YIWLCVLTIFLLIGTTCF 426
Cdd:cd17338  365 FVKLFVLLALLILLAIFF 382
MFS_1 pfam07690
Major Facilitator Superfamily;
16-378 9.01e-04

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 41.25  E-value: 9.01e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062   16 LGIGTLFLYTGYSLQQFIGESVIHSIHEKSPDTISAYAGYYGAAFhlsafAVFSLITPSLQHFVPSKWFLTLASALFAV- 94
Cdd:pfam07690   1 LFLAAFLAALGRSLLGPALPLLLAEDLGISPTEIGLLLTLFSLGY-----ALAQPLAGRLSDRFGRRRVLLIGLLLFALg 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062   95 YYLGFFQLNKYYFYLTQALMGVGYSFYNNGEGQYLSEHSSRRTIESNTGIETAVGHASMFFGGIALIVLCFLLHtdggtg 174
Cdd:pfam07690  76 LLLLLFASSLWLLLVLRVLQGLGAGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLFG------ 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062  175 ieysdlqIRFIYGTMFILNIFSVIVFAFLPTKQYDSIASKSSTVVPSFANQIKQLLKAfQSTNLLILMPFFFFQGFAVSF 254
Cdd:pfam07690 150 -------WRAAFLILAILSLLAAVLLLLPRPPPESKRPKPAEEARLSLIVAWKALLRD-PVLWLLLALLLFGFAFFGLLT 221
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062  255 LMTVYPTTLSFTHafktdiYIIGIYSVSMGLAEAIGGIFLRPLLKRAGDYGLYVTAGFNFLSYSVVIILaflsipnlstf 334
Cdd:pfam07690 222 YLPLYQEVLGLSA------LLAGLLLGLGGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLL----------- 284
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 808357062  335 gptssppIFLTPSRLLVFIIGFLIGFSDFCVTMARAVICQVAVP 378
Cdd:pfam07690 285 -------LSLTLSSLWLLLALLLLGFGFGLVFPALNALVSDLAP 321
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
4-387 4.30e-03

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 39.19  E-value: 4.30e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062   4 TPRRHELLSTYLLGIGTLFLYTGYSLQQFIGESVIHSIHEkSPDTISAYAGYYGAAFhlsafAVFSLITPSLQHFVPSKW 83
Cdd:COG2814    3 ATPRRRWLALLALALGAFLSGLGIGIVLPALPLIAADLGA-SPAQAGLVVTAYLLGA-----ALGAPLAGRLADRFGRRR 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062  84 FLTLASALFAVYYLGFFQLNKYY-FYLTQALMGVGYSFYNNGEGQYLSEHSSRRTIESNTGIETAVGHASMFFGGIALIV 162
Cdd:COG2814   77 VLLLGLLLFALGSLLCALAPSLWlLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGL 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062 163 LCFLLHtdggtgieysdlqirfiYGTMFILNIFSVIVFAFLptkqydSIASKSSTVVPSFANQIKQLLKAFQSTNLLILM 242
Cdd:COG2814  157 LADLFG-----------------WRWVFLVNAVLALLALLL------LLRLLPESRPAARARLRGSLRELLRRPRLLLLL 213
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 808357062 243 PFFFFQGFAVSFLMTVYPTTLsfTHAFKTDIYIIGIYSVSMGLAEAIGGIFLRPLLKRAGdyglyvtagfnflSYSVVII 322
Cdd:COG2814  214 LLAFLLGFGFFALFTYLPLYL--QEVLGLSASAAGLLLALFGLGGVLGALLAGRLADRFG-------------RRRLLLI 278
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 808357062 323 LAFLSIPNLSTFGPTSSPPIFLtpsrLLVFIIGFLIGFSdfcVTMARAVICQVAVPDCRMQVFSL 387
Cdd:COG2814  279 GLLLLALGLLLLALAGSLWLLL----LALFLLGFGFGLL---FPLLQALVAELAPPEARGRASGL 336
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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