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Conserved domains on  [gi|939626283|ref|NP_001303499|]
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PFTAIRE-interacting factor 1B, isoform E [Drosophila melanogaster]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NosR super family cl42688
Transcriptional regulator NosR of nitric oxide reductase [Transcription];
781-855 6.24e-03

Transcriptional regulator NosR of nitric oxide reductase [Transcription];


The actual alignment was detected with superfamily member COG3901:

Pssm-ID: 443108 [Multi-domain]  Cd Length: 713  Bit Score: 40.69  E-value: 6.24e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 939626283  781 LLRKALKDCGLCGGDDVYSCEDDVCEECALNCEECPEDCPLEKCEECDDECPpeqqgCLCCHCRALICDEECKTV 855
Cdd:COG3901   612 LGLALAAAALARRRLWRRRRRECCCGCCCCCCKCCCIVIIIDGIIIINECCC-----CCCLCCRRCQDDPLCPPR 681
 
Name Accession Description Interval E-value
NosR COG3901
Transcriptional regulator NosR of nitric oxide reductase [Transcription];
781-855 6.24e-03

Transcriptional regulator NosR of nitric oxide reductase [Transcription];


Pssm-ID: 443108 [Multi-domain]  Cd Length: 713  Bit Score: 40.69  E-value: 6.24e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 939626283  781 LLRKALKDCGLCGGDDVYSCEDDVCEECALNCEECPEDCPLEKCEECDDECPpeqqgCLCCHCRALICDEECKTV 855
Cdd:COG3901   612 LGLALAAAALARRRLWRRRRRECCCGCCCCCCKCCCIVIIIDGIIIINECCC-----CCCLCCRRCQDDPLCPPR 681
 
Name Accession Description Interval E-value
NosR COG3901
Transcriptional regulator NosR of nitric oxide reductase [Transcription];
781-855 6.24e-03

Transcriptional regulator NosR of nitric oxide reductase [Transcription];


Pssm-ID: 443108 [Multi-domain]  Cd Length: 713  Bit Score: 40.69  E-value: 6.24e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 939626283  781 LLRKALKDCGLCGGDDVYSCEDDVCEECALNCEECPEDCPLEKCEECDDECPpeqqgCLCCHCRALICDEECKTV 855
Cdd:COG3901   612 LGLALAAAALARRRLWRRRRRECCCGCCCCCCKCCCIVIIIDGIIIINECCC-----CCCLCCRRCQDDPLCPPR 681
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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