NCBI Conserved Domain Search

Leucine-rich repeat (LRR) protein [Transcription];

151-336

2.31e-24

Leucine-rich repeat (LRR) protein [Transcription];

Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 106.56 E-value: 2.31e-24

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 151 IIPKSLSKLALMYEFDVSNNRFVGQFPevslswpSLKFLDLRYNEFEgSLPSEIFD-KDLDAIFLNNNRFESvIPGTIGK 229
Cdd:COG4886    87 LGLTDLGDLTNLTELDLSGNEELSNLT-------NLESLDLSGNQLT-DLPEELANlTNLKELDLSNNQLTD-LPEPLGN 157

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 230 SKA-SVVTFANNKFSGcIPKSIGNMKNLNEIVFTGNNLTGcFPNEIGLLNNVTVFDASKNGfVGSLPSTLSGLASVEQLD 308
Cdd:COG4886   158 LTNlKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQITD-LPEPLGNLTNLEELDLSGNQ-LTDLPEPLANLTNLETLD 234

                         170       180
                  ....*....|....*....|....*...
gi 1063694145 309 LSHNKLTGFvvDKFCKLPNLDSFKFSYN 336
Cdd:COG4886   235 LSNNQLTDL--PELGNLTNLEELDLSNN 260

PHA03247

large tegument protein UL36; Provisional

406-798

1.25e-10

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 65.73 E-value: 1.25e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  406 TSEPKPSKPEPVMP----KPSDSSKPETPKTPEQPSPKPQPPKHESPKPEEPenkHELPKQKESPKPQPSK---PEDSPK 478
Cdd:PHA03247  2570 PPRPAPRPSEPAVTsrarRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDT---HAPDPPPPSPSPAANEpdpHPPPTV 2646

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  479 PEQPKPEESPKPEQPQIP-------EPTKPVSPPneaQGPTPDDPYDA-SPVKNRRSPPPPkvedtrvpppqppmpspsp 550
Cdd:PHA03247  2647 PPPERPRDDPAPGRVSRPrrarrlgRAAQASSPP---QRPRRRAARPTvGSLTSLADPPPP------------------- 2704

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  551 pspiysPPPPVHSPPPPVYSSPPPPHVYSPPPPVASPPPPSPPPPVHSPPPPPVFSPPPPVFSPPPPSPVYSPPPPSHSP 630
Cdd:PHA03247  2705 ------PPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAG 2778

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  631 PPPVYSPPPPTFSPPPTHNTNQPPMGAPTPTQAPTPSSETTQVPTPSsesdqsqilSPVQAPTPVQSSTPSSEPTQVPTP 710
Cdd:PHA03247  2779 PPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPA---------GPLPPPTSAQPTAPPPPPGPPPPS 2849

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  711 SSSESYQAPNlSPVQAPTPVQAPTTSSETSQVPTPSSESNQSPSQAPTPILEPVHAPTPNSKPvQSPTPSSEPVSSPEQS 790
Cdd:PHA03247  2850 LPLGGSVAPG-GDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQP-QAPPPPQPQPQPPPPP 2927


                   ....*...
gi 1063694145  791 EEVEAPEP 798
Cdd:PHA03247  2928 QPQPPPPP 2935

PspC_subgroup_2

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

408-537

9.61e-08

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 55.55 E-value: 9.61e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 408 EPKPSKPEPVMPKPSDSSKPETPKTPEQPSPkpqppkhESPKPEEPEnKHELPKQKESPKPQPSKPEDSPKPEQPKPEES 487
Cdd:NF033839  306 EKKEVKPEPETPKPEVKPQLEKPKPEVKPQP-------EKPKPEVKP-QLETPKPEVKPQPEKPKPEVKPQPEKPKPEVK 377

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1063694145 488 PKPEQPQIPEPTKPVSPPNEAQgPTPDDPydASPVKNRRSPPPPKVEDTR 537
Cdd:NF033839  378 PQPETPKPEVKPQPEKPKPEVK-PQPEKP--KPEVKPQPEKPKPEVKPQP 424

PspC_subgroup_1

NF033838

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...

405-523

9.24e-06

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.

Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 49.24 E-value: 9.24e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 405 RTSEPKPSKPEPVMPKPSDSSKPETPKTPEQPSPkpqppkhESPKPEEPENKHELPKQKESPKPQPSKPEDSPKPEQPKP 484
Cdd:NF033838  366 RNEEKIKQAKAKVESKKAEATRLEKIKTDRKKAE-------EEAKRKAAEEDKVKEKPAEQPQPAPAPQPEKPAPKPEKP 438

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1063694145 485 EESPKPEQPQIPEPTKPVSPPNE--------AQGPTPDDPYDASPVK 523
Cdd:NF033838  439 AEQPKAEKPADQQAEEDYARRSEeeynrltqQQPPKTEKPAQPSTPK 485

PspC_subgroup_2

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

409-501

2.25e-05

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 47.84 E-value: 2.25e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 409 PKPS-KPEPVMPKPSDSSKPETPKtpEQPSPKPqppkhESPKPeEPENKHELPKQKESPKPQPSKPEDSPKPEQPKPEES 487
Cdd:NF033839  405 PKPEvKPQPEKPKPEVKPQPEKPK--PEVKPQP-----EKPKP-EVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVK 476

                          90
                  ....*....|....
gi 1063694145 488 PKPEQPQiPEPTKP 501
Cdd:NF033839  477 PQPEKPK-PDNSKP 489

PARM

pfam17061

PARM; Human PARM-1 is a mucin-like, androgen-regulated transmembrane protein that is present ...

657-763

2.47e-05

PARM; Human PARM-1 is a mucin-like, androgen-regulated transmembrane protein that is present in most tissues, with high levels in the heart, kidney and placenta. It has been shown to be induced and expressed in prostate after castration and may have a role in cell proliferation and immortalization in prostate cancer.

Pssm-ID: 465341 [Multi-domain] Cd Length: 296 Bit Score: 47.16 E-value: 2.47e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 657 APTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTP-SSSESYQAPNLSPVQAPTPVQAPTT 735
Cdd:pfam17061 105 TPTPEEHSSGTPETSVPATGSQSPAESPTLTSPQAPASSPSSPSTSPPEVSSASvTTNHSSTETSTQPTGAPTTPESPTE 184

                          90       100
                  ....*....|....*....|....*...
gi 1063694145 736 SSETSQVPTPSSESNQSPSQAPTPILEP 763
Cdd:pfam17061 185 EHSSGHTPTSHATSEPVPTETTPQTTVP 212

Not5

COG5665

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

658-799

7.29e-05

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 46.58 E-value: 7.29e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 658 PTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPT-QVPTPSSSESYQAPNLSPvQAPTPVQA--PT 734
Cdd:COG5665   260 PKSQPTSPSGGTTPPSTNQLTTSNTPTSTAKAQPQPPTKKQPAKEPPSdTASGNPSAPSVLINSDSP-TSEDPATAsvPT 338

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1063694145 735 TSsETSQVPTPSSESnQSPSQAPTPILEPV--HAPTPNSKPVQSP-TPSSEPVSSPEQSEEVEAPEPT 799
Cdd:COG5665   339 TE-ETTAFTTPSSVP-STPAEKDTPATDLAtpVSPTPPETSVDKKvSPDSATSSTKSEKEGGTASSPM 404

PspC_subgroup_2

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

416-516

9.29e-05

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 45.92 E-value: 9.29e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 416 PVMPKPSDSSKPETPKTPEQPspkpqppkheSPKPEEPENKhelpkqkesPKPQPSKPEDSPKPEQPKPEESPKPEQPQI 495
Cdd:NF033839  281 QDTPKEPGNKKPSAPKPGMQP----------SPQPEKKEVK---------PEPETPKPEVKPQLEKPKPEVKPQPEKPKP 341

                          90       100
                  ....*....|....*....|.
gi 1063694145 496 PEPTKPVSPPNEAQgPTPDDP 516
Cdd:NF033839  342 EVKPQLETPKPEVK-PQPEKP 361

LRR_8

pfam13855

Leucine rich repeat;

255-314

2.06e-04

Leucine rich repeat;

Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 39.82 E-value: 2.06e-04

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1063694145 255 NLNEIVFTGNNLT----GCFPNeiglLNNVTVFDASKNGFVGSLPSTLSGLASVEQLDLSHNKL 314
Cdd:pfam13855   2 NLRSLDLSNNRLTslddGAFKG----LSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61

PPP1R42

cd21340

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...

275-336

2.47e-03

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.

Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 40.15 E-value: 2.47e-03

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1063694145 275 GLLNNVTVFDASKNGfVGSLpSTLSGLASVEQLDLSHNKLTGF--VVDKFCKLPNLDSFKFSYN 336
Cdd:cd21340   117 ALSNSLRVLNISGNN-IDSL-EPLAPLRNLEQLDASNNQISDLeeLLDLLSSWPSLRELDLTGN 178

SAV_2336_NTERM

NF041121

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...

446-531

3.48e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.

Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.76 E-value: 3.48e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 446 ESPKPEEPENKH-ELPKQKESPKPQPSKPEDSPKPEQPKPEESPKPEQPQIPeptkPVSPPneAQGPTPDDPYDASPVKN 524
Cdd:NF041121   20 APPSPEGPAPTAaSQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAPYPGSLA----PPPPP--PPGPAGAAPGAALPVRV 93


                  ....*..
gi 1063694145 525 RRSPPPP 531
Cdd:NF041121   94 PAPPALP 100

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

680-757

7.81e-03

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 39.49 E-value: 7.81e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 680 SDQSQILSPVQAPTPVQSST--PSSEPTQVPTPSSSESyQAPNLSPVQAPTPVQAP-TTSSETSQVPTPSSESNQSPSQA 756
Cdd:TIGR00601  65 KEKDFVVVMVSKPKTGTGKVapPAATPTSAPTPTPSPP-ASPASGMSAAPASAVEEkSPSEESATATAPESPSTSVPSSG 143


                  .
gi 1063694145 757 P 757
Cdd:TIGR00601 144 S 144

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

405-535

8.41e-03

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 39.37 E-value: 8.41e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 405 RTSEPKPSKPEPVMPK--PSDSSKPETPKTPEQPSPKPQPPKHESPKPEEP-----ENKHELPKQKESPKPQPSKPEDSP 477
Cdd:NF040712  210 ADARPEEVEPAPAAEGapATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVgpgaaPAAEPDEATRDAGEPPAPGAAETP 289

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1063694145 478 KPEQPKPEESPKPEQPQIPEPTKPVSPpnEAQGPTPddpydasPVKNRRSPPPPKVED 535
Cdd:NF040712  290 EAAEPPAPAPAAPAAPAAPEAEEPARP--EPPPAPK-------PKRRRRRASVPSWDD 338

Name

Accession

Description

Interval

E-value

PLN00113

leucine-rich repeat receptor-like protein kinase; Provisional

76-341

4.02e-32

leucine-rich repeat receptor-like protein kinase; Provisional

Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 134.59 E-value: 4.02e-32

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  76 KAIYSDPFKTTANWVGS-DVCSYNGVYCapalddDSLTVVAGVDLNHADIAGHLPPELGLMTDLALFHINSNRFCGIIPK 154
Cdd:PLN00113   38 KSSINDPLKYLSNWNSSaDVCLWQGITC------NNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPD 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 155 SLSKL--ALMYeFDVSNNRFVGQFPEVSLswPSLKFLDLRYNEFEGSLPSEI-FDKDLDAIFLNNNRFESVIPGTIGK-S 230
Cdd:PLN00113  112 DIFTTssSLRY-LNLSNNNFTGSIPRGSI--PNLETLDLSNNMLSGEIPNDIgSFSSLKVLDLGGNVLVGKIPNSLTNlT 188

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 231 KASVVTFANNKFSGCIPKSIGNMKNLNEIVFTGNNLTGCFPNEIGLLNNVTVFDASKNGFVGSLPSTLSGLASVEQLDLS 310
Cdd:PLN00113  189 SLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLY 268

                         250       260       270
                  ....*....|....*....|....*....|.
gi 1063694145 311 HNKLTGFVVDKFCKLPNLDSFKFSYNFFNGE 341
Cdd:PLN00113  269 QNKLSGPIPPSIFSLQKLISLDLSDNSLSGE 299

PLN00113

leucine-rich repeat receptor-like protein kinase; Provisional

111-341

7.60e-25

leucine-rich repeat receptor-like protein kinase; Provisional

Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 111.48 E-value: 7.60e-25

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 111 LTVVAGVDLNHADIAGHLPPELGLMTDLALFHINSNRFCGIIPKSLSKLALMYEFDVSNNRFVGQFPEVSLSWPSLKFLD 190
Cdd:PLN00113  235 LTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILH 314

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 191 LRYNEFEGSLPSEIFD-KDLDAIFLNNNRFESVIPGTIGK-SKASVVTFANNKFSGCIPKSIGNMKNLNEIVFTGNNLTG 268
Cdd:PLN00113  315 LFSNNFTGKIPVALTSlPRLQVLQLWSNKFSGEIPKNLGKhNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEG 394

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063694145 269 CFPNEIGLLNNVTVFDASKNGFVGSLPSTLSGLASVEQLDLSHNKLTGFVVDKFCKLPNLDSFKFSYNFFNGE 341
Cdd:PLN00113  395 EIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGG 467

PLN00113

leucine-rich repeat receptor-like protein kinase; Provisional

109-340

1.18e-24

leucine-rich repeat receptor-like protein kinase; Provisional

Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 110.71 E-value: 1.18e-24

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 109 DSLTVVagvDLNHADIAGHLPPEL---GLMTDLALFhinSNRFCGIIPKSLSKLALMYEFDVSNNRFVGQFPEVSLSWPS 185
Cdd:PLN00113  356 NNLTVL---DLSTNNLTGEIPEGLcssGNLFKLILF---SNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPL 429

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 186 LKFLDLRYNEFEGSLPSEIFD-KDLDAIFLNNNRFESVIPGTIGKSKASVVTFANNKFSGCIPKSIGNMKNLNEIVFTGN 264
Cdd:PLN00113  430 VYFLDISNNNLQGRINSRKWDmPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSEN 509

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063694145 265 NLTGCFPNEIGLLNNVTVFDASKNGFVGSLPSTLSGLASVEQLDLSHNKLTGFVVDKFCKLPNLDSFKFSYNFFNG 340
Cdd:PLN00113  510 KLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585

LRR

Leucine-rich repeat (LRR) protein [Transcription];

151-336

2.31e-24

Leucine-rich repeat (LRR) protein [Transcription];

Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 106.56 E-value: 2.31e-24

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 151 IIPKSLSKLALMYEFDVSNNRFVGQFPevslswpSLKFLDLRYNEFEgSLPSEIFD-KDLDAIFLNNNRFESvIPGTIGK 229
Cdd:COG4886    87 LGLTDLGDLTNLTELDLSGNEELSNLT-------NLESLDLSGNQLT-DLPEELANlTNLKELDLSNNQLTD-LPEPLGN 157

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 230 SKA-SVVTFANNKFSGcIPKSIGNMKNLNEIVFTGNNLTGcFPNEIGLLNNVTVFDASKNGfVGSLPSTLSGLASVEQLD 308
Cdd:COG4886   158 LTNlKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQITD-LPEPLGNLTNLEELDLSGNQ-LTDLPEPLANLTNLETLD 234

                         170       180
                  ....*....|....*....|....*...
gi 1063694145 309 LSHNKLTGFvvDKFCKLPNLDSFKFSYN 336
Cdd:COG4886   235 LSNNQLTDL--PELGNLTNLEELDLSNN 260

LRR

Leucine-rich repeat (LRR) protein [Transcription];

108-336

2.54e-23

Leucine-rich repeat (LRR) protein [Transcription];

Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 103.47 E-value: 2.54e-23

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 108 DDSLTVVAGVDLNHADIAGHLPPELGLMTDLALFHINSNrfcgiipKSLSKLALMYEFDVSNNRfVGQFPEVSLSWPSLK 187
Cdd:COG4886    68 LLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGN-------EELSNLTNLESLDLSGNQ-LTDLPEELANLTNLK 139

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 188 FLDLRYNEFEgSLPSEIFD-KDLDAIFLNNNRFESvIPGTIGKSKA-SVVTFANNKFSGcIPKSIGNMKNLNEIVFTGNN 265
Cdd:COG4886   140 ELDLSNNQLT-DLPEPLGNlTNLKSLDLSNNQLTD-LPEELGNLTNlKELDLSNNQITD-LPEPLGNLTNLEELDLSGNQ 216

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063694145 266 LTGcFPNEIGLLNNVTVFDASKNGFVgSLPStLSGLASVEQLDLSHNKLTGFvvDKFCKLPNLDSFKFSYN 336
Cdd:COG4886   217 LTD-LPEPLANLTNLETLDLSNNQLT-DLPE-LGNLTNLEELDLSNNQLTDL--PPLANLTNLKTLDLSNN 282

PLN00113

leucine-rich repeat receptor-like protein kinase; Provisional

117-344

2.46e-21

leucine-rich repeat receptor-like protein kinase; Provisional

Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 99.92 E-value: 2.46e-21

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 117 VDLNHADIAGHLPPELGLMTDLALFHINSNRFCGIIPKSLSKLALMYEFDVSNNRFVGQFPEVSLSWPSLKFLDLRYNEF 196
Cdd:PLN00113  169 LDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNL 248

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 197 EGSLPSEIFD-KDLDAIFLNNNRFESVIPGTI-GKSKASVVTFANNKFSGCIPKSIGNMKNLnEIV------FTG----- 263
Cdd:PLN00113  249 TGPIPSSLGNlKNLQYLFLYQNKLSGPIPPSIfSLQKLISLDLSDNSLSGEIPELVIQLQNL-EILhlfsnnFTGkipva 327

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 264 --------------NNLTGCFPNEIGLLNNVTVFDASKNGFVGSLPSTLSGLASVEQLDLSHNKLTGFVVDKFCKLPNLD 329
Cdd:PLN00113  328 ltslprlqvlqlwsNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLR 407

                         250
                  ....*....|....*
gi 1063694145 330 SFKFSYNFFNGEAES 344
Cdd:PLN00113  408 RVRLQDNSFSGELPS 422

PLN00113

leucine-rich repeat receptor-like protein kinase; Provisional

110-341

6.67e-21

leucine-rich repeat receptor-like protein kinase; Provisional

Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 98.77 E-value: 6.67e-21

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 110 SLTVVAGVDLNHADIAGHLPPELGLMTDLALFHINSNRFCGIIPKSLSKLALMYEFDVSNNRFVGQFPEVSLSWPSLKFL 189
Cdd:PLN00113  282 SLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVL 361

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 190 DLRYNEFEGSLPSEIFDK-DLDAIFLNNNRFESVIPGTIGKSKA-SVVTFANNKFSGCIPKSIGNMKNLNEIVFTGNNLT 267
Cdd:PLN00113  362 DLSTNNLTGEIPEGLCSSgNLFKLILFSNSLEGEIPKSLGACRSlRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQ 441

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1063694145 268 GCFPNEIGLLNNVTVFDASKNGFVGSLPStLSGLASVEQLDLSHNKLTGFVVDKFCKLPNLDSFKFSYNFFNGE 341
Cdd:PLN00113  442 GRINSRKWDMPSLQMLSLARNKFFGGLPD-SFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGE 514

LRR

Leucine-rich repeat (LRR) protein [Transcription];

129-343

8.82e-20

Leucine-rich repeat (LRR) protein [Transcription];

Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 92.69 E-value: 8.82e-20

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 129 PPELGLMTDLALFHINSNRFCGIiPKSLSKLALMYEFDVSNNRFvGQFPEVSLSWPSLKFLDLRYNEFEgSLPSEIFD-K 207
Cdd:COG4886   106 NEELSNLTNLESLDLSGNQLTDL-PEELANLTNLKELDLSNNQL-TDLPEPLGNLTNLKSLDLSNNQLT-DLPEELGNlT 182

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 208 DLDAIFLNNNRFESvIPGTIGKSKA-SVVTFANNKFSGcIPKSIGNMKNLNEIVFTGNNLTGcFPnEIGLLNNVTVFDAS 286
Cdd:COG4886   183 NLKELDLSNNQITD-LPEPLGNLTNlEELDLSGNQLTD-LPEPLANLTNLETLDLSNNQLTD-LP-ELGNLTNLEELDLS 258

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1063694145 287 KNGfVGSLPStLSGLASVEQLDLSHNKLTGFVVDKFCKLPNLDSFKFSYNFFNGEAE 343
Cdd:COG4886   259 NNQ-LTDLPP-LANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLEL 313

PLN00113

leucine-rich repeat receptor-like protein kinase; Provisional

126-302

3.09e-19

leucine-rich repeat receptor-like protein kinase; Provisional

Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 93.37 E-value: 3.09e-19

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 126 GHLPPELGLMTDLALFHINSNRFCGIIPKSLSKLALMYEFDVSNNRFVGQFPEVSLSWPSLKFLDLRYNEFEGSLPSEIF 205
Cdd:PLN00113  394 GEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG 473

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 206 DKDLDAIFLNNNRFESVIPGTIGK-------------------------SKASVVTFANNKFSGCIPKSIGNMKNLNEIV 260
Cdd:PLN00113  474 SKRLENLDLSRNQFSGAVPRKLGSlselmqlklsenklsgeipdelsscKKLVSLDLSHNQLSGQIPASFSEMPVLSQLD 553

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1063694145 261 FTGNNLTGCFPNEIGLLNNVTVFDASKNGFVGSLPSTLSGLA 302
Cdd:PLN00113  554 LSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLA 595

LRR

Leucine-rich repeat (LRR) protein [Transcription];

128-341

7.27e-14

Leucine-rich repeat (LRR) protein [Transcription];

Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 74.58 E-value: 7.27e-14

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 128 LPPELGLMTDLALFHINSNRFCGIiPKSLSKLALMYEFDVSNNRfVGQFPEvSLS-WPSLKFLDLRYNEFEgSLPSEIFD 206
Cdd:COG4886   151 LPEPLGNLTNLKSLDLSNNQLTDL-PEELGNLTNLKELDLSNNQ-ITDLPE-PLGnLTNLEELDLSGNQLT-DLPEPLAN 226

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 207 -KDLDAIFLNNNRFESvIPGTIGKSKASVVTFANNKFSGcIPKSiGNMKNLNEIVFTGNNLTGCFPNEIGLLNNVTVFDA 285
Cdd:COG4886   227 lTNLETLDLSNNQLTD-LPELGNLTNLEELDLSNNQLTD-LPPL-ANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLL 303

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1063694145 286 SKNGFVGSLPSTLSGLASVEQLDLSHNKLTGFVVDKFCKLPNLDSFKFSYNFFNGE 341
Cdd:COG4886   304 LLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLL 359

PHA03247

large tegument protein UL36; Provisional

406-798

1.25e-10

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 65.73 E-value: 1.25e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  406 TSEPKPSKPEPVMP----KPSDSSKPETPKTPEQPSPKPQPPKHESPKPEEPenkHELPKQKESPKPQPSK---PEDSPK 478
Cdd:PHA03247  2570 PPRPAPRPSEPAVTsrarRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDT---HAPDPPPPSPSPAANEpdpHPPPTV 2646

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  479 PEQPKPEESPKPEQPQIP-------EPTKPVSPPneaQGPTPDDPYDA-SPVKNRRSPPPPkvedtrvpppqppmpspsp 550
Cdd:PHA03247  2647 PPPERPRDDPAPGRVSRPrrarrlgRAAQASSPP---QRPRRRAARPTvGSLTSLADPPPP------------------- 2704

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  551 pspiysPPPPVHSPPPPVYSSPPPPHVYSPPPPVASPPPPSPPPPVHSPPPPPVFSPPPPVFSPPPPSPVYSPPPPSHSP 630
Cdd:PHA03247  2705 ------PPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAG 2778

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  631 PPPVYSPPPPTFSPPPTHNTNQPPMGAPTPTQAPTPSSETTQVPTPSsesdqsqilSPVQAPTPVQSSTPSSEPTQVPTP 710
Cdd:PHA03247  2779 PPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPA---------GPLPPPTSAQPTAPPPPPGPPPPS 2849

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  711 SSSESYQAPNlSPVQAPTPVQAPTTSSETSQVPTPSSESNQSPSQAPTPILEPVHAPTPNSKPvQSPTPSSEPVSSPEQS 790
Cdd:PHA03247  2850 LPLGGSVAPG-GDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQP-QAPPPPQPQPQPPPPP 2927


                   ....*...
gi 1063694145  791 EEVEAPEP 798
Cdd:PHA03247  2928 QPQPPPPP 2935

PHA03247

large tegument protein UL36; Provisional

416-799

6.48e-10

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 63.42 E-value: 6.48e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  416 PVMPKPSDSSKPETPKTPEQPSPKPQPPKHESPKP---------EEPENKHELPK------------QKESPKPQPSKPE 474
Cdd:PHA03247  2478 PVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPsrlapailpDEPVGEPVHPRmltwirgleelaSDDAGDPPPPLPP 2557

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  475 DSPKPEQ----PKPEESPKPEQPQI-PEPTKPVSPPNEAQGPTPDDPYDASPVKNRRSPPPPkvedtrvpppqppmpsps 549
Cdd:PHA03247  2558 AAPPAAPdrsvPPPRPAPRPSEPAVtSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPP------------------ 2619

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  550 ppspiysppppvhsppppvyssPPPPHVYSPPPPVASPPPPSPPPPVHSPPPPPVFSPPPPVFSPPPPSPVYSPPPPSHS 629
Cdd:PHA03247  2620 ----------------------DTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQAS 2677

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  630 PPPPVYSPPPPTFSPPPTHNTNQPPMGAPTPTQAPTPSSETTQVPTPSSESDQSQ---ILSPVQAPTPVQSSTPSSE--P 704
Cdd:PHA03247  2678 SPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASpalPAAPAPPAVPAGPATPGGParP 2757

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  705 TQVPTPSSSESYQAPNLSPvqAPTPVQAPTTSSETSQVPTPSSESNQSPSQAPTPILEPVHAPTPNSKPV--QSPTPSSE 782
Cdd:PHA03247  2758 ARPPTTAGPPAPAPPAAPA--AGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAgpLPPPTSAQ 2835

                          410
                   ....*....|....*..
gi 1063694145  783 PVSSPEQSEEVEAPEPT 799
Cdd:PHA03247  2836 PTAPPPPPGPPPPSLPL 2852

PHA03247

large tegument protein UL36; Provisional

411-783

2.30e-08

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 58.41 E-value: 2.30e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  411 PSKPEPVMPKPSDSSKPETPKTPEQPSPKPQPPKHESPKPEEPENKHE-------LPKQKESP--KPQPSKPEDSPK--- 478
Cdd:PHA03247  2608 PRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDpapgrvsRPRRARRLgrAAQASSPPQRPRrra 2687

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  479 ---------------PEQPKPEESPKPEQPQIPEPTKPVSppneAQGPTPDDPYDASPVKNRRSPPPPKVEDTRVPPPQP 543
Cdd:PHA03247  2688 arptvgsltsladppPPPPTPEPAPHALVSATPLPPGPAA----ARQASPALPAAPAPPAVPAGPATPGGPARPARPPTT 2763

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  544 PMPSPSPPSPIYSPPPPVHSPPPPVYSSPPPPHVYSPPPPVASPPPPSPPPPVHSPPPPPVFSPPPPVFSPPPPSPVYSP 623
Cdd:PHA03247  2764 AGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPP 2843

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  624 PPPSHSPPPPVYSPPPPTFspppthnTNQPPMGAPTPTQAPTPSSETTQVPTPS-SESDQSQILSPVQAPTPVQSSTPsS 702
Cdd:PHA03247  2844 GPPPPSLPLGGSVAPGGDV-------RRRPPSRSPAAKPAAPARPPVRRLARPAvSRSTESFALPPDQPERPPQPQAP-P 2915

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  703 EPTQVPTPSSSESYQAPNLSPVQAPTPVqAPTTSSETSQVPTPSSESNQSPSQAPTPILEPVHAPTPNSKPVQSPTPSSE 782
Cdd:PHA03247  2916 PPQPQPQPPPPPQPQPPPPPPPRPQPPL-APTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTP 2994


                   .
gi 1063694145  783 P 783
Cdd:PHA03247  2995 P 2995

PLN03150

hypothetical protein; Provisional

226-318

2.65e-08

hypothetical protein; Provisional

Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 57.52 E-value: 2.65e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 226 TIGKSKASVVTFANNKFSGCIPKSIGNMKNLNEIVFTGNNLTGCFPNEIGLLNNVTVFDASKNGFVGSLPSTLSGLASVE 305
Cdd:PLN03150  414 TKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLR 493

                          90
                  ....*....|...
gi 1063694145 306 QLDLSHNKLTGFV 318
Cdd:PLN03150  494 ILNLNGNSLSGRV 506

PRK07764

DNA polymerase III subunits gamma and tau; Validated

688-799

4.78e-08

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 56.92 E-value: 4.78e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 688 PVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPNLSPVQAPTPVQAP-TTSSETSQVPTPSSESNQSPSQAPTPILEPVHA 766
Cdd:PRK07764  390 GAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPaPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPA 469

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1063694145 767 PTPNSKPVQSPTPSSEPVSSPEQSEEVEAPEPT 799
Cdd:PRK07764  470 PAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAA 502

PHA03269

envelope glycoprotein C; Provisional

657-788

6.96e-08

envelope glycoprotein C; Provisional

Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 56.28 E-value: 6.96e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 657 APTPTQAPTP---SSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQaPNLSPVQAPTPVQAP 733
Cdd:PHA03269   20 ANLNTNIPIPelhTSAATQKPDPAPAPHQAASRAPDPAVAPTSAASRKPDLAQAPTPAASEKFD-PAPAPHQAASRAPDP 98

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063694145 734 TTSSETSQVPTPssESNQSPSQAPTPILEPVHAPTpnSKPVQSPTPSSEPVSSPE 788
Cdd:PHA03269   99 AVAPQLAAAPKP--DAAEAFTSAAQAHEAPADAGT--SAASKKPDPAAHTQHSPP 149

PRK07764

DNA polymerase III subunits gamma and tau; Validated

652-772

8.84e-08

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 56.15 E-value: 8.84e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 652 QPPMGAPTPTQAPTPSSETTQVPTPSSESDQSQilsPVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPNLSPVQAPTPVQ 731
Cdd:PRK07764  398 APSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQ---PAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAP 474

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1063694145 732 APTTSSETSQVPTPSSESNQSPSQAPTPILEPVHAPTPNSK 772
Cdd:PRK07764  475 EPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRER 515

PspC_subgroup_2

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

408-537

9.61e-08

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 55.55 E-value: 9.61e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 408 EPKPSKPEPVMPKPSDSSKPETPKTPEQPSPkpqppkhESPKPEEPEnKHELPKQKESPKPQPSKPEDSPKPEQPKPEES 487
Cdd:NF033839  306 EKKEVKPEPETPKPEVKPQLEKPKPEVKPQP-------EKPKPEVKP-QLETPKPEVKPQPEKPKPEVKPQPEKPKPEVK 377

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1063694145 488 PKPEQPQIPEPTKPVSPPNEAQgPTPDDPydASPVKNRRSPPPPKVEDTR 537
Cdd:NF033839  378 PQPETPKPEVKPQPEKPKPEVK-PQPEKP--KPEVKPQPEKPKPEVKPQP 424

PHA03378

EBNA-3B; Provisional

648-787

2.32e-07

EBNA-3B; Provisional

Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 54.69 E-value: 2.32e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 648 HNTNQPPMGAPTPTQAPtpssetTQVPTPssesdqsqiLSPVQAPtPVQSSTPSSEPTQVPTPSSSES-YQAPNLSPVQA 726
Cdd:PHA03378  681 ANTMLPIQWAPGTMQPP------PRAPTP---------MRPPAAP-PGRAQRPAAATGRARPPAAAPGrARPPAAAPGRA 744

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063694145 727 PTPVQAPTTSSETSQVPTPSSESNQSPSqAPTPILEPVHAPTPNSKPVQSPTPSSEPVSSP 787
Cdd:PHA03378  745 RPPAAAPGRARPPAAAPGRARPPAAAPG-APTPQPPPQAPPAPQQRPRGAPTPQPPPQAGP 804

PLN03150

hypothetical protein; Provisional

266-360

3.76e-07

hypothetical protein; Provisional

Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 53.67 E-value: 3.76e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 266 LTGCFPNEIGLLNNVTVFDASKNGFVGSLPSTLSGLASVEQLDLSHNKLTGFVVDKFCKLPNLDSFKFSYNFFNGEAESC 345
Cdd:PLN03150  430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAA 509

                          90
                  ....*....|....*.
gi 1063694145 346 VPGRN-NGKQFDDTNN 360
Cdd:PLN03150  510 LGGRLlHRASFNFTDN 525

rne

PRK10811

ribonuclease E; Reviewed

660-799

3.86e-07

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 53.89 E-value: 3.86e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  660 PTQAPTP------SSETTQ--------VPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESyQAPNlspVQ 725
Cdd:PRK10811   820 PTQSPMPltvacaSPEMASgkvwirypVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVE-AVAE---VV 895

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1063694145  726 APTPVQAPTTSSETSQVPTPSSESNQSPSQAPTPILEPVHAP-----TPNSKPVQSPTPSSEPVSSPEQSEEVEAPEPT 799
Cdd:PRK10811   896 EEPVVVAEPQPEEVVVVETTHPEVIAAPVTEQPQVITESDVAvaqevAEHAEPVVEPQDETADIEEAAETAEVVVAEPE 974

PRK07994

DNA polymerase III subunits gamma and tau; Validated

653-798

4.25e-07

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 53.72 E-value: 4.25e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 653 PPMGAPTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPNLSPVQAPTPVQA 732
Cdd:PRK07994  361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKK 440

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063694145 733 PTTSSETSQVPTPSSesnqspsqaptpiLEPVHAPTPNSKPVQSPTPSSEPVSSPEQSEEVEAPEP 798
Cdd:PRK07994  441 SEPAAASRARPVNSA-------------LERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEP 493

PTZ00449

104 kDa microneme/rhoptry antigen; Provisional

408-531

7.05e-07

104 kDa microneme/rhoptry antigen; Provisional

Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 53.15 E-value: 7.05e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 408 EPKPSKPEPVMPKPSDSSKPETPKtpeqpspkpqppkhespKPEEPEN-KHELPKQKESPKPQPSKPEDSPKPEQPKPEE 486
Cdd:PTZ00449  566 EHKPSKIPTLSKKPEFPKDPKHPK-----------------DPEEPKKpKRPRSAQRPTRPKSPKLPELLDIPKSPKRPE 628

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1063694145 487 SPK-PEQPqiPEPTKPVSPPNeaqgptPDDPYDASPVKNRRSPPPP 531
Cdd:PTZ00449  629 SPKsPKRP--PPPQRPSSPER------PEGPKIIKSPKPPKSPKPP 666

PHA03247

large tegument protein UL36; Provisional

405-796

1.03e-06

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.02 E-value: 1.03e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  405 RTSEPKPSKPEPVMPKP--SDSSKPETPKTPEQPSPKPQPPKHESPKPEEPENKHELPKQKESPKPqPSKPEDSPKPEQP 482
Cdd:PHA03247  2706 PTPEPAPHALVSATPLPpgPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAP-PAAPAAGPPRRLT 2784

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  483 KPEESP-KPEQPQIPEPTKPVSPPNEAQGPTPDDPYDASPVKNrrSPPPPKVEDTRVPPPQPPMPSPSPPSPIYSPPPPV 561
Cdd:PHA03247  2785 RPAVASlSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGP--LPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDV 2862

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  562 HSPPPPVYSSPPPPHVYSPPPPVASPPPPSPPPPVHSPPPPPVFSPPPPVFSPPPPSPVYSPPPPSHSPPPpvysppppt 641
Cdd:PHA03247  2863 RRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPP--------- 2933

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  642 fspppthntnqPPMGAPTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTP---VQSSTPSSEPTQVPTPS------S 712
Cdd:PHA03247  2934 -----------PPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPrfrVPQPAPSREAPASSTPPltghslS 3002

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  713 SESYQAPNLSPVQAPTPvqAPTTSSETSQVPTPSSESNQSPSQAPTPILEPVHAPTPNSKPVQSPtPSSEPVSSPEQSEE 792
Cdd:PHA03247  3003 RVSSWASSLALHEETDP--PPVSLKQTLWPPDDTEDSDADSLFDSDSERSDLEALDPLPPEPHDP-FAHEPDPATPEAGA 3079


                   ....
gi 1063694145  793 VEAP 796
Cdd:PHA03247  3080 RESP 3083

PLN03150

hypothetical protein; Provisional

189-275

2.75e-06

hypothetical protein; Provisional

Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 50.97 E-value: 2.75e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 189 LDLRYNEFEGSLPSEIFD-KDLDAIFLNNNRFESVIPGTIGK-SKASVVTFANNKFSGCIPKSIGNMKNLNEIVFTGNNL 266
Cdd:PLN03150  423 LGLDNQGLRGFIPNDISKlRHLQSINLSGNSIRGNIPPSLGSiTSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502


                  ....*....
gi 1063694145 267 TGCFPNEIG 275
Cdd:PLN03150  503 SGRVPAALG 511

PRK07764

DNA polymerase III subunits gamma and tau; Validated

674-847

7.52e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 49.60 E-value: 7.52e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 674 PTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPNLSPVQAPTPVQAPTTSSETSQVPTPSSESNQSP 753
Cdd:PRK07764  597 GEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGA 676

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 754 ---SQAPTPILEPVHAPTPNSKPVQSPTPSSEPVSSPEQSEEVEAPEPTpvnpSSVPSSSPSTDTSIPPPENNDDDDDGD 830
Cdd:PRK07764  677 apaAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAA----QGASAPSPAADDPVPLPPEPDDPPDPA 752

                         170
                  ....*....|....*..
gi 1063694145 831 FVLPPHIGFQYASPPPP 847
Cdd:PRK07764  753 GAPAQPPPPPAPAPAAA 769

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

651-760

7.60e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 49.71 E-value: 7.60e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 651 NQPPMGAPTPTQAPTPSSETTQVPTPSSESdQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPNLSPVQAPTPV 730
Cdd:PRK14951  382 ARPEAAAPAAAPVAQAAAAPAPAAAPAAAA-SAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETV 460

                          90       100       110
                  ....*....|....*....|....*....|
gi 1063694145 731 QAPTTssETSQVPTPSSESNQSPSQAPTPI 760
Cdd:PRK14951  461 AIPVR--VAPEPAVASAAPAPAAAPAAARL 488

PRK07994

DNA polymerase III subunits gamma and tau; Validated

651-769

8.16e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 49.48 E-value: 8.16e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 651 NQPPMGAPTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPvqssTPSSEPTQVPTPSSSESYQAPNLSPVQAPTPV 730
Cdd:PRK07994  394 PQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK----AKKSEPAAASRARPVNSALERLASVRPAPSAL 469

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1063694145 731 QAPTTSSETSQV-PTPSSESNQSPSQAPTPILEPV-HAPTP 769
Cdd:PRK07994  470 EKAPAKKEAYRWkATNPVEVKKEPVATPKALKKALeHEKTP 510

PRK07994

DNA polymerase III subunits gamma and tau; Validated

662-821

9.12e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 49.48 E-value: 9.12e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 662 QAPTPSSETTQVPTPSSESDQSQIlSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPNLSPVQAPTPVQapttsSETSQ 741
Cdd:PRK07994  362 AAPLPEPEVPPQSAAPAASAQATA-APTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQ-----RAQGA 435

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 742 VPTPSSESNQSPSQAPTP-ILEPVHAPTPNSKPVQSPTPSSEPVSSPEQSEEVEAPEptpvnPSSVPSSSPSTDTSIPPP 820
Cdd:PRK07994  436 TKAKKSEPAAASRARPVNsALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKE-----PVATPKALKKALEHEKTP 510


                  .
gi 1063694145 821 E 821
Cdd:PRK07994  511 E 511

PspC_subgroup_1

NF033838

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...

405-523

9.24e-06

Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 49.24 E-value: 9.24e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 405 RTSEPKPSKPEPVMPKPSDSSKPETPKTPEQPSPkpqppkhESPKPEEPENKHELPKQKESPKPQPSKPEDSPKPEQPKP 484
Cdd:NF033838  366 RNEEKIKQAKAKVESKKAEATRLEKIKTDRKKAE-------EEAKRKAAEEDKVKEKPAEQPQPAPAPQPEKPAPKPEKP 438

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1063694145 485 EESPKPEQPQIPEPTKPVSPPNE--------AQGPTPDDPYDASPVK 523
Cdd:NF033838  439 AEQPKAEKPADQQAEEDYARRSEeeynrltqQQPPKTEKPAQPSTPK 485

PLN03150

hypothetical protein; Provisional

97-204

1.31e-05

hypothetical protein; Provisional

Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 48.66 E-value: 1.31e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  97 YNGVYCApaLDDDSLT-VVAGVDLNHADIAGHLPPELGLMTDLALFHINSNRFCGIIPKSLSKLALMYEFDVSNNRFVGQ 175
Cdd:PLN03150  404 WSGADCQ--FDSTKGKwFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGS 481

                          90       100
                  ....*....|....*....|....*....
gi 1063694145 176 FPEVSLSWPSLKFLDLRYNEFEGSLPSEI 204
Cdd:PLN03150  482 IPESLGQLTSLRILNLNGNSLSGRVPAAL 510

PspC_subgroup_2

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

409-501

2.25e-05

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 47.84 E-value: 2.25e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 409 PKPS-KPEPVMPKPSDSSKPETPKtpEQPSPKPqppkhESPKPeEPENKHELPKQKESPKPQPSKPEDSPKPEQPKPEES 487
Cdd:NF033839  405 PKPEvKPQPEKPKPEVKPQPEKPK--PEVKPQP-----EKPKP-EVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVK 476

                          90
                  ....*....|....
gi 1063694145 488 PKPEQPQiPEPTKP 501
Cdd:NF033839  477 PQPEKPK-PDNSKP 489

PARM

pfam17061

PARM; Human PARM-1 is a mucin-like, androgen-regulated transmembrane protein that is present ...

657-763

2.47e-05

Pssm-ID: 465341 [Multi-domain] Cd Length: 296 Bit Score: 47.16 E-value: 2.47e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 657 APTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTP-SSSESYQAPNLSPVQAPTPVQAPTT 735
Cdd:pfam17061 105 TPTPEEHSSGTPETSVPATGSQSPAESPTLTSPQAPASSPSSPSTSPPEVSSASvTTNHSSTETSTQPTGAPTTPESPTE 184

                          90       100
                  ....*....|....*....|....*...
gi 1063694145 736 SSETSQVPTPSSESNQSPSQAPTPILEP 763
Cdd:pfam17061 185 EHSSGHTPTSHATSEPVPTETTPQTTVP 212

PRK10927

cell division protein FtsN;

662-799

3.07e-05

cell division protein FtsN;

Pssm-ID: 236797 [Multi-domain] Cd Length: 319 Bit Score: 46.98 E-value: 3.07e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 662 QAPTPSSETTQVPTPSS-ESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESY-----QAPNLS---PVQAPT---- 728
Cdd:PRK10927   97 RAPTEPSAGGEVKTPEQlTPEQRQLLEQMQADMRQQPTQLVEVPWNEQTPEQRQQTlqrqrQAQQLAeqqRLAQQSrtte 176

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063694145 729 -PVQAPTTSSETSQVPTPSSESNQSPSQAPTPILepvhAPTPNSKPVQSPTPSSEPVSSPeqseeVEAPEPT 799
Cdd:PRK10927  177 qSWQQQTRTSQAAPVQAQPRQSKPASTQQPYQDL----LQTPAHTTAQSKPQQAAPVTRA-----ADAPKPT 239

PHA03269

envelope glycoprotein C; Provisional

658-751

3.53e-05

envelope glycoprotein C; Provisional

Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 47.42 E-value: 3.53e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 658 PTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPssEPTQVPTpSSSESYQAPNLSPVQAPTPVQAPTTSS 737
Cdd:PHA03269   68 PDLAQAPTPAASEKFDPAPAPHQAASRAPDPAVAPQLAAAPKP--DAAEAFT-SAAQAHEAPADAGTSAASKKPDPAAHT 144

                          90
                  ....*....|....
gi 1063694145 738 ETSQVPTPSSESNQ 751
Cdd:PHA03269  145 QHSPPPFAYTRSME 158

motB

PRK12799

flagellar motor protein MotB; Reviewed

649-778

5.67e-05

flagellar motor protein MotB; Reviewed

Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 46.63 E-value: 5.67e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 649 NTNQPPMGAPTPTQAPTPSSETTQVPTPSSEsdQSQILSPVQAPTPVqsSTPSSEPTQVPTPS------SSESYQAPNLS 722
Cdd:PRK12799  289 GLKQIDTHGTVPVAAVTPSSAVTQSSAITPS--SAAIPSPAVIPSSV--TTQSATTTQASAVAlssagvLPSDVTLPGTV 364

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1063694145 723 PVQAPTPVQAPTTSSETSQVPTPSSESNQSPSQAPTPILEPvhAPTPNSKPvqSPT 778
Cdd:PRK12799  365 ALPAAEPVNMQPQPMSTTETQQSSTGNITSTANGPTTSLPA--APASNIPV--SPT 416

PRK14949

DNA polymerase III subunits gamma and tau; Provisional

659-798

6.33e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 46.64 E-value: 6.33e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 659 TPTQAPTPSSETTqvptPSSESDQSQILSPVQAPTPVQSSTPSSEPtqvptPSSSESYQAPNLSPVQAPT--------PV 730
Cdd:PRK14949  647 TPPSRAPPASLSK----PASSPDASQTSASFDLDPDFELATHQSVP-----EAALASGSAPAPPPVPDPYdrppweeaPE 717

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1063694145 731 QAPTTSSETSQVPTPSSESNQSPSQAPTPILEPVHAPTPnSKPVQSPTPSSEPvSSPEQSEEVEAPEP 798
Cdd:PRK14949  718 VASANDGPNNAAEGNLSESVEDASNSELQAVEQQATHQP-QVQAEAQSPASTT-ALTQTSSEVQDTEL 783

Not5

COG5665

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

658-799

7.29e-05

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 46.58 E-value: 7.29e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 658 PTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPT-QVPTPSSSESYQAPNLSPvQAPTPVQA--PT 734
Cdd:COG5665   260 PKSQPTSPSGGTTPPSTNQLTTSNTPTSTAKAQPQPPTKKQPAKEPPSdTASGNPSAPSVLINSDSP-TSEDPATAsvPT 338

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1063694145 735 TSsETSQVPTPSSESnQSPSQAPTPILEPV--HAPTPNSKPVQSP-TPSSEPVSSPEQSEEVEAPEPT 799
Cdd:COG5665   339 TE-ETTAFTTPSSVP-STPAEKDTPATDLAtpVSPTPPETSVDKKvSPDSATSSTKSEKEGGTASSPM 404

PRK14971

DNA polymerase III subunit gamma/tau;

690-804

8.42e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 46.31 E-value: 8.42e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 690 QAPTPVQSSTPSSEPTQVPTPSSSESYQAPNlsPVQAPTPVQAPTTSSETSQVPTPSSESNQSPSqaptpilePVHAPTP 769
Cdd:PRK14971  361 QLTQKGDDASGGRGPKQHIKPVFTQPAAAPQ--PSAAAAASPSPSQSSAAAQPSAPQSATQPAGT--------PPTVSVD 430

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1063694145 770 NSKPVQSPTPSSEPVSSPEQSEEVEAPEPTPVNPS 804
Cdd:PRK14971  431 PPAAVPVNPPSTAPQAVRPAQFKEEKKIPVSKVSS 465

PspC_subgroup_2

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

416-516

9.29e-05

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 45.92 E-value: 9.29e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 416 PVMPKPSDSSKPETPKTPEQPspkpqppkheSPKPEEPENKhelpkqkesPKPQPSKPEDSPKPEQPKPEESPKPEQPQI 495
Cdd:NF033839  281 QDTPKEPGNKKPSAPKPGMQP----------SPQPEKKEVK---------PEPETPKPEVKPQLEKPKPEVKPQPEKPKP 341

                          90       100
                  ....*....|....*....|.
gi 1063694145 496 PEPTKPVSPPNEAQgPTPDDP 516
Cdd:NF033839  342 EVKPQLETPKPEVK-PQPEKP 361

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

653-783

1.00e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 45.86 E-value: 1.00e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 653 PPMGAPTPTQAP--TPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPNLSPVQAPTPV 730
Cdd:PRK14951  366 PAAAAEAAAPAEkkTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAV 445

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1063694145 731 QAPTTSSetsqvPTPSSESNQSPSQAPTPILEPVHAPTPNSKPVQSPTPSSEP 783
Cdd:PRK14951  446 ALAPAPP-----AQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493

PRK10263

DNA translocase FtsK; Provisional

659-792

1.13e-04

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 46.23 E-value: 1.13e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  659 TPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSEsyqaPNLSPVQAPTPVQAPTTSSE 738
Cdd:PRK10263   746 TPIVEPVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQ----PQYQQPQQPVAPQPQYQQPQ 821

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  739 TSQVPTPSSESNQSPSqAPTP---ILEPVHAPTPNSKPVQSPT---PSSEPVSSPEQSEE 792
Cdd:PRK10263   822 QPVAPQPQYQQPQQPV-APQPqdtLLHPLLMRNGDSRPLHKPTtplPSLDLLTPPPSEVE 880

DUF5585

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

652-799

1.15e-04

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 45.72 E-value: 1.15e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 652 QPPMGAPTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAP-------TPVQSSTPSSEPTQVPTPSS---SESYQAPNL 721
Cdd:pfam17823 210 RGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPaalatlaAAAGTVASAAGTINMGDPHArrlSPAKHMPSD 289

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 722 SPVQAPTPVQAPTTSSETSQVPTPSSESNQSPSQAPTPILEPVHAPTPNSKPVQS-------------PTPSSEPVSSPE 788
Cdd:pfam17823 290 TMARNPAAPMGAQAQGPIIQVSTDQPVHNTAGEPTPSPSNTTLEPNTPKSVASTNlavvtttkaqakePSASPVPVLHTS 369

                         170
                  ....*....|.
gi 1063694145 789 QSEEVEAPEPT 799
Cdd:pfam17823 370 MIPEVEATSPT 380

PRK10856

cytoskeleton protein RodZ;

649-751

1.33e-04

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 45.02 E-value: 1.33e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 649 NTNQPPMGAPTPTQAPTPSSETTQVPTPssesdqsqilspvqAPTPVQSSTPSSEPTQVPTPSSSESYQAPNLSPVQAPT 728
Cdd:PRK10856  165 DTSTTTDPATTPAPAAPVDTTPTNSQTP--------------AVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPAT 230

                          90       100
                  ....*....|....*....|...
gi 1063694145 729 PVQAPTTSSETSQVPTPSSESNQ 751
Cdd:PRK10856  231 PDGAAPLPTDQAGVSTPAADPNA 253

Herpes_BLLF1

pfam05109

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...

659-820

1.40e-04

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.

Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 45.68 E-value: 1.40e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 659 TPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSepTQVPTPSSSESYQAPNLSPVQAPTPVQAPTTSSE 738
Cdd:pfam05109 408 TATNATTTTHKVIFSKAPESTTTSPTLNTTGFAAPNTTTGLPSS--THVPTNLTAPASTGPTVSTADVTSPTPAGTTSGA 485

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 739 TSQVPTPSSESNQSPSQAP--TPILEPVHAPTPNSKpvqSPTPSSEPVSSPEQSEEVEAPEPTPVNPSSVPSSSPSTDT- 815
Cdd:pfam05109 486 SPVTPSPSPRDNGTESKAPdmTSPTSAVTTPTPNAT---SPTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNATSPTPAv 562


                  ....*
gi 1063694145 816 SIPPP 820
Cdd:pfam05109 563 TTPTP 567

PHA03269

envelope glycoprotein C; Provisional

693-798

1.43e-04

envelope glycoprotein C; Provisional

Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 45.49 E-value: 1.43e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 693 TPVQSSTpSSEPTQVPTPSSSESyqAPNLSPVQAPTPVQAPTTSSETSQVPTPSSESNQSPSQAPTPIL--EPVHAPTPN 770
Cdd:PHA03269   13 ACINLII-ANLNTNIPIPELHTS--AATQKPDPAPAPHQAASRAPDPAVAPTSAASRKPDLAQAPTPAAseKFDPAPAPH 89

                          90       100
                  ....*....|....*....|....*...
gi 1063694145 771 SKPVQSPTPSSEPVSSpeQSEEVEAPEP 798
Cdd:PHA03269   90 QAASRAPDPAVAPQLA--AAPKPDAAEA 115

PHA03269

envelope glycoprotein C; Provisional

652-778

1.77e-04

envelope glycoprotein C; Provisional

Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 45.10 E-value: 1.77e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 652 QPPMGAPTPTQAptpsSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTqvptpSSSESYQAPNlsPVQAPTPVQ 731
Cdd:PHA03269   38 QKPDPAPAPHQA----ASRAPDPAVAPTSAASRKPDLAQAPTPAASEKFDPAPA-----PHQAASRAPD--PAVAPQLAA 106

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1063694145 732 APTtsSETSQVPTPSSESNQSPSQAPTPILEPVHAPTPNSKPVQSPT 778
Cdd:PHA03269  107 APK--PDAAEAFTSAAQAHEAPADAGTSAASKKPDPAAHTQHSPPPF 151

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

728-821

1.93e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 45.19 E-value: 1.93e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 728 TPVQAPTTSSETSQVPTPSSEsNQSPSQAPTPilePVHAPTPNSKPVQSPTPSSEPVSSPEQSEEVEAPEPTPVNPSSVP 807
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRP-TPAPSTRPKA---AAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAI 436

                          90
                  ....*....|....
gi 1063694145 808 SSSPSTDTSIPPPE 821
Cdd:PRK14950  437 PVDEKPKYTPPAPP 450

LRR_8

pfam13855

Leucine rich repeat;

255-314

2.06e-04

Leucine rich repeat;

Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 39.82 E-value: 2.06e-04

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1063694145 255 NLNEIVFTGNNLT----GCFPNeiglLNNVTVFDASKNGFVGSLPSTLSGLASVEQLDLSHNKL 314
Cdd:pfam13855   2 NLRSLDLSNNRLTslddGAFKG----LSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61

PRK07764

DNA polymerase III subunits gamma and tau; Validated

650-822

2.43e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.98 E-value: 2.43e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 650 TNQPPMGAPTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPNLSPVQAPTP 729
Cdd:PRK07764  632 AAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPA 711

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 730 VQAPTTSSETSQVPTPSSESNQSPSQAPTPILEPVHAPTPNSKPVQSP-TPSSEPVSSPEQSEEVEAPEPtpvnpssvps 808
Cdd:PRK07764  712 GQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPpPPAPAPAAAPAAAPPPSPPSE---------- 781

                         170
                  ....*....|....
gi 1063694145 809 SSPSTDTSIPPPEN 822
Cdd:PRK07764  782 EEEMAEDDAPSMDD 795

rne

PRK10811

ribonuclease E; Reviewed

648-799

2.46e-04

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 45.03 E-value: 2.46e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  648 HNTNQPPMGAPTPTQAPTPSSETTQVPTPSSESDQSqilsPVQAPTPVQSSTPSSEPTQVPTPSSSESYQApnlsPVQAP 727
Cdd:PRK10811   856 EEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAV----AEVVEEPVVVAEPQPEEVVVVETTHPEVIAA----PVTEQ 927

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063694145  728 TPVQAPTTSSETSQVPtpsseSNQSPSQAPTPILEPVHAPTPNSK-PVQSPTPSSEPVSSPEQSEEVEAPEPT 799
Cdd:PRK10811   928 PQVITESDVAVAQEVA-----EHAEPVVEPQDETADIEEAAETAEvVVAEPEVVAQPAAPVVAEVAAEVETVT 995

PRK08691

DNA polymerase III subunits gamma and tau; Validated

650-798

2.47e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 44.70 E-value: 2.47e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 650 TNQPPMGAPTPTqaPTPSSETTQVP--TPSSE--SDQSQILSPV----QAPTPVQSSTPSSEPTQVPT-PSSSESYQApn 720
Cdd:PRK08691  384 TAEKETAAKKPQ--PRPEAETAQTPvqTASAAamPSEGKTAGPVsnqeNNDVPPWEDAPDEAQTAAGTaQTSAKSIQT-- 459

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 721 LSPVQAPTPVQAPTTSSETSQVPTPSSESnqsPSQAP---TPILEPVHAPTPNSKPVQSPTPS-SEPVSSPEQSEEVEAP 796
Cdd:PRK08691  460 ASEAETPPENQVSKNKAADNETDAPLSEV---PSENPiqaTPNDEAVETETFAHEAPAEPFYGyGFPDNDCPPEDGAEIP 536


                  ..
gi 1063694145 797 EP 798
Cdd:PRK08691  537 PP 538

PLN02328

lysine-specific histone demethylase 1 homolog

406-507

2.55e-04

lysine-specific histone demethylase 1 homolog

Pssm-ID: 215187 [Multi-domain] Cd Length: 808 Bit Score: 44.60 E-value: 2.55e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 406 TSEPKPSKPEPVMPKPSDSSKPETPKTPEQPSPkpqppkhESPKPEEPENKHE--LPKQKESPKP-QPSKPEDSPKPEQP 482
Cdd:PLN02328    4 ETKEPEDPADNVNDVVSEASSPETDLSLSPSQS-------EQNIENDGQNSPEtqSPLTELQPSPlPPNTTLDAPVSDSQ 76

                          90       100
                  ....*....|....*....|....*
gi 1063694145 483 KPEESPKpEQPQIPEPTKPVSPPNE 507
Cdd:PLN02328   77 GDESSSE-QQPQNPNSTEPAPPPKK 100

PTZ00449

104 kDa microneme/rhoptry antigen; Provisional

410-532

2.70e-04

104 kDa microneme/rhoptry antigen; Provisional

Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 44.68 E-value: 2.70e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 410 KPSKPEPVMPKPSDSSK-PETPKTPEQPSPKPQPPKHE--SPKPEEPENKHELPKQKESP----------KPQPSK---- 472
Cdd:PTZ00449  490 KKSKKKLAPIEEEDSDKhDEPPEGPEASGLPPKAPGDKegEEGEHEDSKESDEPKEGGKPgetkegevgkKPGPAKehkp 569

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063694145 473 ---PEDSPKPEQPKPEESPK-PEQPQIPE-------PTKPVSPPNEAQGPTPDDPYDASPVKNRRSPPPPK 532
Cdd:PTZ00449  570 skiPTLSKKPEFPKDPKHPKdPEEPKKPKrprsaqrPTRPKSPKLPELLDIPKSPKRPESPKSPKRPPPPQ 640

PRK10856

cytoskeleton protein RodZ;

677-791

3.00e-04

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 43.86 E-value: 3.00e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 677 SSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSEsyqapnlspvqAPTPVQAPTTSSETSQVPTPSSeSNQSPSQA 756
Cdd:PRK10856  155 SQNSGQSVPLDTSTTTDPATTPAPAAPVDTTPTNSQTP-----------AVATAPAPAVDPQQNAVVAPSQ-ANVDTAAT 222

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1063694145 757 PTPIlepvhAPTPNSKPVQSPTpSSEPVSSPEQSE 791
Cdd:PRK10856  223 PAPA-----APATPDGAAPLPT-DQAGVSTPAADP 251

PRK14971

DNA polymerase III subunit gamma/tau;

665-797

3.04e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 44.38 E-value: 3.04e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 665 TPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSesyQAPNLSPVQAPTPVQAPTTSSETSQVPT 744
Cdd:PRK14971  363 TQKGDDASGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQP---SAPQSATQPAGTPPTVSVDPPAAVPVNP 439

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063694145 745 PSsesnqSPSQAPTPILEPVHAPTPNSKpVQSPTPSSE-PVSSPEQSEEVEAPE 797
Cdd:PRK14971  440 PS-----TAPQAVRPAQFKEEKKIPVSK-VSSLGPSTLrPIQEKAEQATGNIKE 487

PLN03209

translocon at the inner envelope of chloroplast subunit 62; Provisional

657-797

3.28e-04

translocon at the inner envelope of chloroplast subunit 62; Provisional

Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 44.15 E-value: 3.28e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 657 APTPTQAPTPSSETTQV-PTPSSESDQSQilSPVQAPTPVQSSTPSSEPTqvPTPSSSESYQAPNLSPVQAPTPVQAPTT 735
Cdd:PLN03209  340 KPVPTKPVTPEAPSPPIeEEPPQPKAVVP--RPLSPYTAYEDLKPPTSPI--PTPPSSSPASSKSVDAVAKPAEPDVVPS 415

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063694145 736 SSETSQVPtpSSESNQSPSQAPTPiLEPvHAPTPNSKPVQSPTPSSEPVSSPEQSEEVEAPE 797
Cdd:PLN03209  416 PGSASNVP--EVEPAQVEAKKTRP-LSP-YARYEDLKPPTSPSPTAPTGVSPSVSSTSSVPA 473

PRK11633

cell division protein DedD; Provisional

673-799

3.30e-04

cell division protein DedD; Provisional

Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 43.07 E-value: 3.30e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 673 VPTPSsESDQSQILSPVQAPTPVQsstpsseptqvPTPSSSESYQAPNlspvqaptpvqAPTTSSETSQVPTPSSESNQS 752
Cdd:PRK11633   44 VPKPG-DRDEPDMMPAATQALPTQ-----------PPEGAAEAVRAGD-----------AAAPSLDPATVAPPNTPVEPE 100

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1063694145 753 PSQAPTPILEPVHAPTPNSKPVQSPTPSSEPVSSPEQSEEvEAPEPT 799
Cdd:PRK11633  101 PAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKPEPKPVVE-EKAAPT 146

PRK13042

superantigen-like protein SSL4; Reviewed;

670-760

3.43e-04

superantigen-like protein SSL4; Reviewed;

Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 43.47 E-value: 3.43e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 670 TTQVPTPSSESDQSQILSPVQAPTPVqsSTPSSepTQVPTPSSSESYQAPNLSPVQAPTPVQAPTTSSETsQVPTPSSES 749
Cdd:PRK13042   17 TTGVITTTTQAANATTPSSTKVEAPQ--STPPS--TKVEAPQSKPNATTPPSTKVEAPQQTPNATTPSST-KVETPQSPT 91

                          90
                  ....*....|.
gi 1063694145 750 NQspsQAPTPI 760
Cdd:PRK13042   92 TK---QVPTEI 99

PRK10263

DNA translocase FtsK; Provisional

409-537

4.52e-04

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 43.92 E-value: 4.52e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  409 PKPSKPEPVM-PKP------SDSSKPETPKTPEQPSPKPQPPKHESPKPEEPENKHELPKQKESPKPQPSKPEDSPKPEQ 481
Cdd:PRK10263   364 PGPQTGEPVIaPAPegypqqSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVA 443

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1063694145  482 PKPEESPKPEQPQIPEPT--------KPVSPPNEAQGPTPDDPYDAspvknrrSPPPPKVEDTR 537
Cdd:PRK10263   444 GNAWQAEEQQSTFAPQSTyqteqtyqQPAAQEPLYQQPQPVEQQPV-------VEPEPVVEETK 500

LRR_8

pfam13855

Leucine rich repeat;

295-336

5.04e-04

Leucine rich repeat;

Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 39.04 E-value: 5.04e-04

                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1063694145 295 PSTLSGLASVEQLDLSHNKLTGFVVDKFCKLPNLDSFKFSYN 336
Cdd:pfam13855  18 DGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGN 59

PRK12323

DNA polymerase III subunit gamma/tau;

653-851

5.35e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 43.71 E-value: 5.35e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 653 PPMGAPTPTQAPTPSSETTqvPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPNlsPVQAPTPVQA 732
Cdd:PRK12323  399 PAAPPAAPAAAPAAAAAAR--AVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARP--AAAGPRPVAA 474

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 733 PTTSSETSQVPTPSSesnqspsqAPTPILEPVHAPTPNSKPVQSPTPSSepvSSPEQSEEVEAPEPTPVNPSSVPSSSPS 812
Cdd:PRK12323  475 AAAAAPARAAPAAAP--------APADDDPPPWEELPPEFASPAPAQPD---AAPAGWVAESIPDPATADPDDAFETLAP 543

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1063694145 813 TDTSIPPPENNDDDDDGDFVLPPHIGfqyASPPPPMFQG 851
Cdd:PRK12323  544 APAAAPAPRAAAATEPVVAPRPPRAS---ASGLPDMFDG 579

PLN02217

probable pectinesterase/pectinesterase inhibitor

650-752

5.83e-04

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 43.54 E-value: 5.83e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 650 TNQPPMGAPTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESyqapnlSPVQAPTP 729
Cdd:PLN02217  569 TNSTPTGSAASSNTTFSSDSPSTVVAPSTSPPAGHLGSPPATPSKIVSPSTSPPASHLGSPSTTPS------SPESSIKV 642

                          90       100
                  ....*....|....*....|...
gi 1063694145 730 VQAPTTSSETSqVPTPSSESNQS 752
Cdd:PLN02217  643 ASTETASPESS-IKVASTESSVS 664

PRK11907

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;

653-751

6.11e-04

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;

Pssm-ID: 237019 [Multi-domain] Cd Length: 814 Bit Score: 43.69 E-value: 6.11e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 653 PPMGAPTPTQAPTPSSETTQVPTPSSESDQSQilspvqaPTPVqSSTPSSEPTQVPTPSSSESYQAPNlspvqaPTPVQA 732
Cdd:PRK11907   23 PKLAQAEEIVTTTPATSTEAEQTTPVESDATE-------EADN-TETPVAATTAAEAPSSSETAETSD------PTSEAT 88

                          90
                  ....*....|....*....
gi 1063694145 733 PTTSSETSQVPTPSSESNQ 751
Cdd:PRK11907   89 DTTTSEARTVTPAATETSK 107

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

447-538

6.30e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 43.26 E-value: 6.30e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 447 SPKPEEPENKHELPKQKESPKPQPSkpeDSPKPEQPKPEESPKPEQPqiPEPTKPvsPPNEAQGPTPDDPYDASPVKNRR 526
Cdd:PRK14950  370 KPTAAAPSPVRPTPAPSTRPKAAAA---ANIPPKEPVRETATPPPVP--PRPVAP--PVPHTPESAPKLTRAAIPVDEKP 442

                          90
                  ....*....|....
gi 1063694145 527 --SPPPPKVEDTRV 538
Cdd:PRK14950  443 kyTPPAPPKEEEKA 456

Herpes_BLLF1

pfam05109

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...

659-799

6.88e-04

Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 43.37 E-value: 6.88e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 659 TPTQAPTPSSETTQVPTPSSESDQSQILSPvqaptpvQSSTPSSEPTqVPTPSSSESYQAPNLSPVQAPTPVQAPTTSSE 738
Cdd:pfam05109 475 SPTPAGTTSGASPVTPSPSPRDNGTESKAP-------DMTSPTSAVT-TPTPNATSPTPAVTTPTPNATSPTLGKTSPTS 546

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063694145 739 TSQVPTPSSESNQSPSQAPTPILE-PVHAPTPNSKPVQSPTPSSEPVSSPEQSEEVEAPEPT 799
Cdd:pfam05109 547 AVTTPTPNATSPTPAVTTPTPNATiPTLGKTSPTSAVTTPTPNATSPTVGETSPQANTTNHT 608

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

700-820

7.29e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.16 E-value: 7.29e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 700 PSSEPTQVPTPSSSESYQAPNLSPVQAPTPVQApttsseTSQVPTPSSESNQSPSQAPTPILEPVHAPTPNS-KPVQSPT 778
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAA------AAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAaAPAAAPA 439

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1063694145 779 PSSEPVSSPEQSEEVEAPEPTPVNPSSVPSSSPSTDTSIPPP 820
Cdd:PRK14951  440 AAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAA 481

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

685-797

7.60e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 43.26 E-value: 7.60e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 685 ILSPVQAPTPVQSSTPSSEPTQvPTPSSSesyQAPNlSPVQAPTPVQAPTTSSETSQVPTPssesnqSPSQAPTPILEPV 764
Cdd:PRK14950  359 LLVPVPAPQPAKPTAAAPSPVR-PTPAPS---TRPK-AAAAANIPPKEPVRETATPPPVPP------RPVAPPVPHTPES 427

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1063694145 765 HAPTPNSK-PVQSPTPSSEPVSSPEQSEEVEAPE 797
Cdd:PRK14950  428 APKLTRAAiPVDEKPKYTPPAPPKEEEKALIADG 461

PRK13042

superantigen-like protein SSL4; Reviewed;

659-744

7.68e-04

superantigen-like protein SSL4; Reviewed;

Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 42.31 E-value: 7.68e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 659 TPTQ---APTPSSetTQVPTPSSESDQSQILSPVQAPTpvqSSTPSSepTQVPTPSSSESYQAPNLSPVQAPtpvQAPTT 735
Cdd:PRK13042   23 TTTQaanATTPSS--TKVEAPQSTPPSTKVEAPQSKPN---ATTPPS--TKVEAPQQTPNATTPSSTKVETP---QSPTT 92


                  ....*....
gi 1063694145 736 ssetSQVPT 744
Cdd:PRK13042   93 ----KQVPT 97

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

654-799

8.18e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 42.91 E-value: 8.18e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 654 PMGAPTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSeptqvPTPSSSESYQAPNLSPVQAPTPVQAP 733
Cdd:COG3266   218 EAVAAAAELAALALLAAGAAEVLTARLVLLLLIIGSALKAPSQASSASA-----PATTSLGEQQEVSLPPAVAAQPAAAA 292

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063694145 734 TTSSETSQVPTPSSESNQSPsqAPTPILEPVHAPTpnsKPVQSPTpSSEPVSSPEQSEEVEAPEPT 799
Cdd:COG3266   293 AAQPSAVALPAAPAAAAAAA--APAEAAAPQPTAA---KPVVTET-AAPAAPAPEAAAAAAAPAAP 352

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

661-782

8.25e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 42.91 E-value: 8.25e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 661 TQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPsssesyqAPNLSPVQAPTPVQAPTtssets 740
Cdd:COG3266   255 LKAPSQASSASAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAA-------PAAAAAAAAPAEAAAPQ------ 321

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1063694145 741 QVPTPSSESNQSPSQAPTPILEPVhAPTPNSKPVQSPTPSSE 782
Cdd:COG3266   322 PTAAKPVVTETAAPAAPAPEAAAA-AAAPAAPAVAKKLAADE 362

PHA03378

EBNA-3B; Provisional

654-821

8.42e-04

EBNA-3B; Provisional

Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 43.13 E-value: 8.42e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 654 PMGAPTPTQAPtpssettQVPTPSSESDQSQILSPVQAPTPVQSST---PSSEPTQVPTPSSSESYQAPnlsPVQAPTPV 730
Cdd:PHA03378  645 VLVFPTPHQPP-------QVEITPYKPTWTQIGHIPYQPSPTGANTmlpIQWAPGTMQPPPRAPTPMRP---PAAPPGRA 714

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 731 QAPTTSSETSQVPTPSSESNQSPSQAPTPILEPVHAPTPNSKPVQSPTPSSEPVSSPEQSEEVEAPEpTPVNPSSVPSSS 810
Cdd:PHA03378  715 QRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQ-APPAPQQRPRGA 793

                         170
                  ....*....|.
gi 1063694145 811 PSTDtsiPPPE 821
Cdd:PHA03378  794 PTPQ---PPPQ 801

PRK11901

hypothetical protein; Reviewed

648-787

8.55e-04

hypothetical protein; Reviewed

Pssm-ID: 237015 [Multi-domain] Cd Length: 327 Bit Score: 42.36 E-value: 8.55e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 648 HNTNQPPMgAPTPTQAPTPSSETTQ--VPTPSSESD-----QSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPn 720
Cdd:PRK11901  117 QDISAPPI-SPTPTQAAPPQTPNGQqrIELPGNISDalsqqQGQVNAASQNAQGNTSTLPTAPATVAPSKGAKVPATAE- 194

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1063694145 721 lspvQAPTPVQAPTTSSetsqvPTPSsesnqSPSQAPTPilepvHAPTPNSKPVQSPTPSSEPVSSP 787
Cdd:PRK11901  195 ----THPTPPQKPATKK-----PAVN-----HHKTATVA-----VPPATSGKPKSGAASARALSSAP 242

PRK08691

DNA polymerase III subunits gamma and tau; Validated

662-821

9.45e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 42.77 E-value: 9.45e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 662 QAPTPSSETTQV-PTPSSESDQSQilSPVQapTPVQSSTPSSEPTQVPTpSSSESYQAPNLSPVQAPTPVQAPTTSSETS 740
Cdd:PRK08691  381 SAQTAEKETAAKkPQPRPEAETAQ--TPVQ--TASAAAMPSEGKTAGPV-SNQENNDVPPWEDAPDEAQTAAGTAQTSAK 455

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 741 QVPTPSSESNQSPSQAPTPILEPVHAPTPNSKpVQSPTPS-SEPVSSPEQSEEV--EAP-EPTPVNPSSVPSSSPSTDTS 816
Cdd:PRK08691  456 SIQTASEAETPPENQVSKNKAADNETDAPLSE-VPSENPIqATPNDEAVETETFahEAPaEPFYGYGFPDNDCPPEDGAE 534


                  ....*
gi 1063694145 817 IPPPE 821
Cdd:PRK08691  535 IPPPD 539

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

406-505

9.66e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 42.87 E-value: 9.66e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 406 TSEPKPSKPEPVMPKPSDSSKPETPktpeqpspkpqppKHESPKPEEPenkhelpkQKESPKPQPSKPEDSPKPEQPKPE 485
Cdd:PRK14950  368 PAKPTAAAPSPVRPTPAPSTRPKAA-------------AAANIPPKEP--------VRETATPPPVPPRPVAPPVPHTPE 426

                          90       100
                  ....*....|....*....|
gi 1063694145 486 ESPKPEQPQIPEPTKPVSPP 505
Cdd:PRK14950  427 SAPKLTRAAIPVDEKPKYTP 446

PRK07764

DNA polymerase III subunits gamma and tau; Validated

629-798

1.31e-03

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.28 E-value: 1.31e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 629 SPPPPVYSPPPPTFSPPPTHNTNQPPMGAPTPTQAPTPSSETTQVPTPSSESDQSQilsPVQAPTPVQSSTPSSEPTQVP 708
Cdd:PRK07764  614 RPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGW---PAKAGGAAPAAPPPAPAPAAP 690

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 709 TPSSSESYQAPNLSPVQAPTPVQAPTTSSETSQVPTPSSESNQSPSQAPTPILEPVHAPTPNSKPVQS-PTPSSEPVSSP 787
Cdd:PRK07764  691 AAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPpPPPAPAPAAAP 770

                         170
                  ....*....|.
gi 1063694145 788 EQSEEVEAPEP 798
Cdd:PRK07764  771 AAAPPPSPPSE 781

Atrophin-1

pfam03154

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...

416-798

1.37e-03

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.

Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 42.45 E-value: 1.37e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 416 PVMPKPSDS-SKPETPKTPEQPSPKPQPPKHESPKPEEPENKHELPKQKESPKPQPSKPEDSPkpeQPKPEESPKPEQPQ 494
Cdd:pfam03154 146 PSIPSPQDNeSDSDSSAQQQILQTQPPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPP---QGSPATSQPPNQTQ 222

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 495 IP-------------EPTKPVSPPNEAQGPTPDDPYDASPVKnrrSPPPPKVEDTRVPPPQPPMPSPSPPSPIYSPPPPV 561
Cdd:pfam03154 223 STaaphtliqqtptlHPQRLPSPHPPLQPMTQPPPPSQVSPQ---PLPQPSLHGQMPPMPHSLQTGPSHMQHPVPPQPFP 299

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 562 HSPPPPVYSSPPPPHVYSPPPPVASPPPPSPPPPVHSPPPPPVFSPPPPVFSPPPPSPVYSPPPPSHSPPPPVYSPPPPT 641
Cdd:pfam03154 300 LTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPPREQPLPPAPLSMPHIKPPPTTPIPQLPNPQSHKHPPHLS 379

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 642 FSPPPTHNTNQPPMGAPTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPNL 721
Cdd:pfam03154 380 GPSPFQMNSNLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQ 459

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1063694145 722 SPVQAPTPVQAPTTSSETSQVPTPSSESNQSPSQAPTPILEPVHAPTPNSKPVQSPtPSSEPVSSPEQSEEVEAPEP 798
Cdd:pfam03154 460 SPFPQHPFVPGGPPPITPPSGPPTSTSSAMPGIQPPSSASVSSSGPVPAAVSCPLP-PVQIKEEALDEAEEPESPPP 535

PRK14971

DNA polymerase III subunit gamma/tau;

652-760

1.39e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 42.07 E-value: 1.39e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 652 QPPMGAPTPTQAPTPSSETTQVPTPSSesdqsqilSPVQAPTPVQSSTPSSEPtqVPTPSSSESYQAPNLSPVQAPTPVQ 731
Cdd:PRK14971  390 PQPSAAAAASPSPSQSSAAAQPSAPQS--------ATQPAGTPPTVSVDPPAA--VPVNPPSTAPQAVRPAQFKEEKKIP 459

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1063694145 732 APTTSSETSQVPTPSSESNQSPSQ----APTPI 760
Cdd:PRK14971  460 VSKVSSLGPSTLRPIQEKAEQATGnikeAPTGT 492

PRK04654

sec-independent translocase; Provisional

649-748

1.46e-03

sec-independent translocase; Provisional

Pssm-ID: 135173 [Multi-domain] Cd Length: 214 Bit Score: 40.95 E-value: 1.46e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 649 NTNQPPMGAPTPTQAPTPssettqVPTPSSESDQSQilsPVqAPTPVQSSTPSSEPTQVPTPSSSESYQAPnlSPVQAPT 728
Cdd:PRK04654  124 QVDAAAGAEPGAGQAHTP------VPAPAPVIAQAQ---PI-APAPHQTLVPAPHDTIVPAPHAAHLPSAP--ATPVSVA 191

                          90       100
                  ....*....|....*....|
gi 1063694145 729 PVQAPTTSSETSQVPTPSSE 748
Cdd:PRK04654  192 PVDAGTSASPTPSEPTKIQE 211

PTZ00249

variable surface protein Vir28; Provisional

654-791

1.51e-03

variable surface protein Vir28; Provisional

Pssm-ID: 140276 [Multi-domain] Cd Length: 516 Bit Score: 41.94 E-value: 1.51e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 654 PMGAPTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPNLSPVQAPTPVqaP 733
Cdd:PTZ00249  263 PVSVSSPQAHGRHPGETHTPPLVTVPSSKAHDRNPVQTPTPTSVSGYSSQAKGLEKQAGGESERTSSVPSEQFPLPL--P 340

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1063694145 734 TTSSETSQVPTPSSESNQSPSQAptpilepvhaptpnsKPVQSPTPSSEPVSSPEQSE 791
Cdd:PTZ00249  341 VLLPLGQSGPLESSESEETDEYA---------------GPKGLPEPELELVELQEEDQ 383

PRK12727

flagellar biosynthesis protein FlhF;

652-794

1.51e-03

flagellar biosynthesis protein FlhF;

Pssm-ID: 237182 [Multi-domain] Cd Length: 559 Bit Score: 41.90 E-value: 1.51e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 652 QPPMGAP-TPTQAPTPSSETTQVPTPSSESD-QSQILSPVqaPTPVQSSTPSSEPTQVPTPSSSESYQAPNLSPVQAPTP 729
Cdd:PRK12727  123 QAPAAAPvRAASIPSPAAQALAHAAAVRTAPrQEHALSAV--PEQLFADFLTTAPVPRAPVQAPVVAAPAPVPAIAAALA 200

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063694145 730 VQAPTTSSETSQVPTPSSESNqspsQAPTPILEPVHAPTPNSKPVQSPTPSSEPVSSPEQSEEVE 794
Cdd:PRK12727  201 AHAAYAQDDDEQLDDDGFDLD----DALPQILPPAALPPIVVAPAAPAALAAVAAAAPAPQNDEE 261

PRK13914

invasion associated endopeptidase;

649-754

1.60e-03

invasion associated endopeptidase;

Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 42.10 E-value: 1.60e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 649 NTNQPPmgAPTPTQAP------TPS-SETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPNL 721
Cdd:PRK13914  248 NTATPK--AEVKTEAPaaekqaAPVvKENTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNT 325

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1063694145 722 SPVQAPTPVQAPTTSSETSQVPTPSSESNQSPS 754
Cdd:PRK13914  326 NNTNTSTPSKNTNTNTNSNTNTNSNTNANQGSS 358

PRK10856

cytoskeleton protein RodZ;

669-756

1.64e-03

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 41.55 E-value: 1.64e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 669 ETTQVPTPSSESDQSQIlSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQ-----APNLSPVQAPTPVQAPTTSSETSQVP 743
Cdd:PRK10856  158 SGQSVPLDTSTTTDPAT-TPAPAAPVDTTPTNSQTPAVATAPAPAVDPQqnavvAPSQANVDTAATPAPAAPATPDGAAP 236

                          90
                  ....*....|...
gi 1063694145 744 TPSSESNQSPSQA 756
Cdd:PRK10856  237 LPTDQAGVSTPAA 249

PHA03307

transcriptional regulator ICP4; Provisional

406-783

1.66e-03

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.08 E-value: 1.66e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  406 TSEPKPSKPEPVMPKPSDSSKPETPktpeqpspKPQPPKHESPKPEEPEnkhelpkqkespkpqPSKPEDSPKPEQPKPE 485
Cdd:PHA03307    87 TPTWSLSTLAPASPAREGSPTPPGP--------SSPDPPPPTPPPASPP---------------PSPAPDLSEMLRPVGS 143

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  486 ESPKPEQPQIPEPTKPVSPPNEAQGPTPDDPYDASPVKNRRSPPPPKVEdtRVPPPQPPMPSPSPPSPIYSPPPPVHSPP 565
Cdd:PHA03307   144 PGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAE--PPPSTPPAAASPRPPRRSSPISASASSPA 221

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  566 PPVYSSPPPPHVYSPPPPVASPPPPSPPPPVHSPPPPPVFSPPPPVFSPPPPSPVYSPPPPSHSPPPPVYSPPPPTFSPP 645
Cdd:PHA03307   222 PAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPS 301

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  646 PTHNTNQPPMGAPTPTQAPTPSSETTQvPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPNLSPVQ 725
Cdd:PHA03307   302 SPGSGPAPSSPRASSSSSSSRESSSSS-TSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAA 380

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063694145  726 APTPVQAPTTSSETSQVPTPSSESNQSPSQAPTPI-------LEPVHAPTPNSKPVQSPTPSSEP 783
Cdd:PHA03307   381 SAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSpldagaaSGAFYARYPLLTPSGEPWPGSPP 445

PRK07764

DNA polymerase III subunits gamma and tau; Validated

629-798

1.68e-03

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.28 E-value: 1.68e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 629 SPPPPVYSPPPPTFSPPPTHNTNQPPMGAPTPTQAPTPSSETTQVPTPSSESDQSQI-LSPVQAPTPVQSSTPSSEPTQV 707
Cdd:PRK07764  621 PAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAApAAPPPAPAPAAPAAPAGAAPAQ 700

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 708 PTPSSseSYQAPnlsPVQAPTPVQAPTTSSETSQVPTPSSESNQSPSQAPTPILEPVHAPTPnSKPVQSPTPSSEPVSSP 787
Cdd:PRK07764  701 PAPAP--AATPP---AGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQ-PPPPPAPAPAAAPAAAP 774

                         170
                  ....*....|.
gi 1063694145 788 EQSEEVEAPEP 798
Cdd:PRK07764  775 PPSPPSEEEEM 785

PRK12323

DNA polymerase III subunit gamma/tau;

674-796

1.72e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 42.17 E-value: 1.72e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 674 PTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPNLSPVQA-PTPVQAPTTSSETSQVPTPSSESNQS 752
Cdd:PRK12323  374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRsPAPEALAAARQASARGPGGAPAPAPA 453

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1063694145 753 PSQAPTPILEP-VHAPTPNSKPVQSPTPSSEPVSSPEQSEEVEAP 796
Cdd:PRK12323  454 PAAAPAAAARPaAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPP 498

PHA01929

putative scaffolding protein

651-751

1.87e-03

putative scaffolding protein

Pssm-ID: 177328 Cd Length: 306 Bit Score: 41.19 E-value: 1.87e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 651 NQPPMGAPTPtqAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVqsstpssePTQVPTPSSSEsyQAPNlSPVQAPTPV 730
Cdd:PHA01929   18 NVPPAAAPTP--QPNPVIQPQAPVQPGQPGAPQQLAIPTQQPQPV--------PTSAMTPHVVQ--QAPA-QPAPAAPPA 84

                          90       100
                  ....*....|....*....|.
gi 1063694145 731 QAPTTSSETSQVPTPSSESNQ 751
Cdd:PHA01929   85 AGAALPEALEVPPPPAFTPNG 105

PRK10118

flagellar hook length control protein FliK;

656-792

1.93e-03

flagellar hook length control protein FliK;

Pssm-ID: 236652 [Multi-domain] Cd Length: 408 Bit Score: 41.39 E-value: 1.93e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 656 GAPTPTQAPTPSSETTQVPTPSSESdqsqilspvqaptpvqSSTPSSEPTQVPTPSSSESYQAPNLSPVQAPTPVQAPTT 735
Cdd:PRK10118  152 GQDNTTPVADAPSTVLPAEKPTLLT----------------KDMPSAPQDETHTLSSDEHEKGLTSAQLTTAQPDDAPGT 215

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1063694145 736 SSETSQVPTPSSESNQSPSQAPTPILEPVhAPTPNSKPVQSPTPSSEPV-SSPEQSEE 792
Cdd:PRK10118  216 PAQPLTPLAAEAQAKAEVISTPSPVTAAA-SPTITPHQTQPLPTAAAPVlSAPLGSHE 272

PRK10672

endolytic peptidoglycan transglycosylase RlpA;

654-756

2.05e-03

endolytic peptidoglycan transglycosylase RlpA;

Pssm-ID: 236733 [Multi-domain] Cd Length: 361 Bit Score: 41.20 E-value: 2.05e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 654 PMGAPTPTQAPTPSSETTQVPTPSSESDQSQiLSPVQ------APTPVQSSTP-SSEPTQVPTPSssesyqAPNLSPVQA 726
Cdd:PRK10672  203 GMGTPSVQPAPAPQGDVLPVSNSTLKSEDPT-GAPVTssgflgAPTTLAPGVLeGSEPTPTAPSS------APATAPAAA 275

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1063694145 727 PTPVQAPTTSSETS---QVPTPSSESN-----QSPSQA 756
Cdd:PRK10672  276 APQAAATSSSASGNfvvQVGAVSDQQRaqqwqQSLSQR 313

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

691-821

2.22e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 41.62 E-value: 2.22e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 691 APTPVQSSTPSSEPTQVPTPSSsESYQAPNLSPVQAPTPVQAPTTSSETSQVPTPSSESNQ-SPSQAPTPILEPVHAPtp 769
Cdd:PRK14951  372 AAAPAEKKTPARPEAAAPAAAP-VAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAaAPAAAPAAAPAAVALA-- 448

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063694145 770 nskPVQSPTPSSEPVSSPEQseevEAPEPTPVNPSSVPSSSPSTDTSIPPPE 821
Cdd:PRK14951  449 ---PAPPAQAAPETVAIPVR----VAPEPAVASAAPAPAAAPAAARLTPTEE 493

DUF5585

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

650-759

2.28e-03

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 41.48 E-value: 2.28e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 650 TNQPPMGAPTPTQAPTPSSETTQVPTPSSESDQSqilSPVQAPTPVQSSTPSSEPtqVPTPSSSESYQAPNLSPVQAPTP 729
Cdd:pfam17823 311 STDQPVHNTAGEPTPSPSNTTLEPNTPKSVASTN---LAVVTTTKAQAKEPSASP--VPVLHTSMIPEVEATSPTTQPSP 385

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1063694145 730 V------QAPTTSSETSQVPTPSSESnqSPSQAPTP 759
Cdd:pfam17823 386 LlptqgaAGPGILLAPEQVATEATAG--TASAGPTP 419

PHA03307

transcriptional regulator ICP4; Provisional

446-783

2.33e-03

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 41.70 E-value: 2.33e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  446 ESPKPEEPENKHELPKQKESPKPQPskPEDSPKPEQPKPEESPKPEQPQIPEPTKPVSPPneaQGPTPDDPYDASPVKNR 525
Cdd:PHA03307    66 EPPTGPPPGPGTEAPANESRSTPTW--SLSTLAPASPAREGSPTPPGPSSPDPPPPTPPP---ASPPPSPAPDLSEMLRP 140

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  526 RSPPPPKVEDTRVPPPQPPMPSPSPPSPIYSPPPPVHSPPPPVYSSPPPPHVYSPPPPVASPPPPSPPPPVHSPPPPPVF 605
Cdd:PHA03307   141 VGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSP 220

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  606 SPPPPVFSPPPPSPVYSPPPPSHSPPPPVYSPPPPTFSPPpthntnqPPMGAPTPTQAPTPSSETTQVPTPSSESDQSQI 685
Cdd:PHA03307   221 APAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRP-------APITLPTRIWEASGWNGPSSRPGPASSSSSPRE 293

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  686 LSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPNLSPVQAPTPVQAPTTSSETSQVPTPSSEsnqSPSQAPTPilePVH 765
Cdd:PHA03307   294 RSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRP---PPPADPSS---PRK 367

                          330
                   ....*....|....*...
gi 1063694145  766 APTPNSKPVQSPTPSSEP 783
Cdd:PHA03307   368 RPRPSRAPSSPAASAGRP 385

PHA03132

thymidine kinase; Provisional

648-772

2.40e-03

thymidine kinase; Provisional

Pssm-ID: 222997 [Multi-domain] Cd Length: 580 Bit Score: 41.29 E-value: 2.40e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 648 HNTNQPPMGAPTPTqAPTPSSETTQVPTPSSESDQSQILSPVQAPTPV-----QSSTPSSEPTQVPTPSSSESYQaPNLS 722
Cdd:PHA03132   60 TGSGGGVATSTIYT-VPRPPRGPEQTLDKPDSLPASRELPPGPTPVPPggfrgASSPRLGADSTSPRFLYQVNFP-VILA 137

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1063694145 723 PVQAPTPVQAPTTSSETSQVPTPSSESNQSPSQAPTPILEPVHAPTPNSK 772
Cdd:PHA03132  138 PIGESNSSSEELSEEEEHSRPPPSESLKVKNGGKVYPKGFSKHKTHKRSE 187

Pneumo_att_G

pfam05539

Pneumovirinae attachment membrane glycoprotein G;

658-787

2.45e-03

Pneumovirinae attachment membrane glycoprotein G;

Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 41.19 E-value: 2.45e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 658 PTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPtpvQSSTPSSEPTQVPTPSSSesyQAPNLSPVQAPTPVQAPTTSS 737
Cdd:pfam05539 188 TYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQ---GTTTSSNPEPQTEPPPSQ---RGPSGSPQHPPSTTSQDQSTT 261

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1063694145 738 ETSQVPTPSSESNQSPSQAPTPILEPVHAPTPNSKPVQSPTP---------SSEPVSSP 787
Cdd:pfam05539 262 GDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKRQETGRPTPrptattqsgSSPPHSSP 320

COG5373

Uncharacterized membrane protein [Function unknown];

458-532

2.46e-03

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.52 E-value: 2.46e-03

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063694145 458 ELPKQKESPKPQPSKPEDsPKPEQPKPEESPKPEQPQIPEPTKPVSPPNEAQGPTPDDPYDASPVKNRRSPPPPK 532
Cdd:COG5373    32 ELEAELAEAAEAASAPAE-PEPEAAAAATAAAPEAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAAS 105

PPP1R42

cd21340

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...

275-336

2.47e-03

Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 40.15 E-value: 2.47e-03

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1063694145 275 GLLNNVTVFDASKNGfVGSLpSTLSGLASVEQLDLSHNKLTGF--VVDKFCKLPNLDSFKFSYN 336
Cdd:cd21340   117 ALSNSLRVLNISGNN-IDSL-EPLAPLRNLEQLDASNNQISDLeeLLDLLSSWPSLRELDLTGN 178

PLN02744

dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex

451-505

2.89e-03

dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex

Pssm-ID: 215397 [Multi-domain] Cd Length: 539 Bit Score: 40.99 E-value: 2.89e-03

                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063694145 451 EEPENKHELPKQKESPKPQPSKPEDSPKPEQPKPEESPKPEQPQIPEPTKPVSPP 505
Cdd:PLN02744  189 EEEEDIGKFKDYKPSSSAAPAAPKAKPSPPPPKEEEVEKPASSPEPKASKPSAPP 243

PLN02217

probable pectinesterase/pectinesterase inhibitor

705-799

3.24e-03

probable pectinesterase/pectinesterase inhibitor

Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 41.23 E-value: 3.24e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 705 TQVPTPSSSESYQAPNLSpvqAPTPVQAPTTSSETSQVPTPSSESNQ--SPSQAPtPILEPVHAPTPNSKPVQSPTPSSE 782
Cdd:PLN02217  570 NSTPTGSAASSNTTFSSD---SPSTVVAPSTSPPAGHLGSPPATPSKivSPSTSP-PASHLGSPSTTPSSPESSIKVAST 645

                          90
                  ....*....|....*..
gi 1063694145 783 PVSSPEQSEEVEAPEPT 799
Cdd:PLN02217  646 ETASPESSIKVASTESS 662

PRK12757

cell division protein FtsN; Provisional

654-796

3.26e-03

cell division protein FtsN; Provisional

Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 40.41 E-value: 3.26e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 654 PMGAPTPTqAPTPSSETTQVPTPSSEsdQSQILSPVQA-----PTPVqSSTPSSEPTQvPTPSSSESYQAPNLSPVQAPT 728
Cdd:PRK12757   59 QIGVPTPT-EPSAGGEVNSPTQLTDE--QRQLLEQMQAdmrqqPTQL-SEVPYNEQTP-QVPRSTVQIQQQAQQQQPPAT 133

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1063694145 729 PVQapttssetsqvptpssesnQSPSQAPTPILEPVHAPTPNSKPVQSPTPSSEPVSSPEQSEEVEAP 796
Cdd:PRK12757  134 TAQ-------------------PQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKEKE 182

PRK14960

DNA polymerase III subunit gamma/tau;

713-789

3.27e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237868 [Multi-domain] Cd Length: 702 Bit Score: 41.19 E-value: 3.27e-03

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1063694145 713 SESYQAPNLSPVQAPTPVQAPTTSSETSQVpTPSSESNQSPSQAPTPILEPVHAP--TPNSKPVQSPTPSSEPVSSPEQ 789
Cdd:PRK14960  369 SEPVQQNGQAEVGLNSQAQTAQEITPVSAV-QPVEVISQPAMVEPEPEPEPEPEPepEPEPEPEPEPEPEPEPEPQPNQ 446

PAT1

pfam09770

Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ...

653-775

3.31e-03

Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.

Pssm-ID: 401645 [Multi-domain] Cd Length: 846 Bit Score: 41.17 E-value: 3.31e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 653 PPMGAPTPTQAPTPSSETTQVPTPSS-----ESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPNLSPVQAP 727
Cdd:pfam09770 166 APKKAAAPAPAPQPAAQPASLPAPSRkmmslEEVEAAMRAQAKKPAQQPAPAPAQPPAAPPAQQAQQQQQFPPQIQQQQQ 245

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1063694145 728 TPVQAPTTSSETSQVPTPS--SESNQSPSQAPTPILEPV------HAPTPNSKPVQ 775
Cdd:pfam09770 246 PQQQPQQPQQHPGQGHPVTilQRPQSPQPDPAQPSIQPQaqqfhqQPPPVPVQPTQ 301

PRK11633

cell division protein DedD; Provisional

447-496

3.35e-03

cell division protein DedD; Provisional

Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 39.99 E-value: 3.35e-03

                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1063694145 447 SPKPEEPENKHELPKQKESPKPQPSKPEDSPKPEQPKPEESPKPEQPQIP 496
Cdd:PRK11633   96 PVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKPEPKPVVEEKAAP 145

PRK14948

DNA polymerase III subunit gamma/tau;

649-799

3.40e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 41.10 E-value: 3.40e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 649 NTNQPPMGAPTPTQAPTPSSETTQVPTPSSESDQSQIL-SPVQAPTPVQSSTPSSEPTQVPT-----------------P 710
Cdd:PRK14948  376 NPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPpIPVPAEPTEPSPTPPANAANAPPslnleelwqqilaklelP 455

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 711 SSSE--SYQA---------------PNL--------------------SPVQ-----------APTPVQAPTTSSETSQV 742
Cdd:PRK14948  456 STRMllSQQAelvsldsnraviavsPNWlgmvqsrkplleqafakvlgRSIKlnlesqsgsasNTAKTPPPPQKSPPPPA 535

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1063694145 743 PTPSSESNQSPSQAPTPILEPVHAPTPNSkPVQSPTPSSEPVSSPEQSEEVEAPEPT 799
Cdd:PRK14948  536 PTPPLPQPTATAPPPTPPPPPPTATQASS-NAPAQIPADSSPPPPIPEEPTPSPTKD 591

SAV_2336_NTERM

NF041121

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...

446-531

3.48e-03

Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.76 E-value: 3.48e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 446 ESPKPEEPENKH-ELPKQKESPKPQPSKPEDSPKPEQPKPEESPKPEQPQIPeptkPVSPPneAQGPTPDDPYDASPVKN 524
Cdd:NF041121   20 APPSPEGPAPTAaSQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAPYPGSLA----PPPPP--PPGPAGAAPGAALPVRV 93


                  ....*..
gi 1063694145 525 RRSPPPP 531
Cdd:NF041121   94 PAPPALP 100

Chi1

COG3469

Chitinase [Carbohydrate transport and metabolism];

648-781

3.57e-03

Chitinase [Carbohydrate transport and metabolism];

Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 40.89 E-value: 3.57e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 648 HNTNQPPMGAPTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSST---PSSEPTQVPTPSSSESYQAPNLSPV 724
Cdd:COG3469    78 TTATATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTagsTTTSGASATSSAGSTTTTTTVSGTE 157

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1063694145 725 QAPT-PVQAPTTSSETSQVPTPSSeSNQSPSQAPTPILEPVHAPTPNSKPVQSPTPSS 781
Cdd:COG3469   158 TATGgTTTTSTTTTTTSASTTPSA-TTTATATTASGATTPSATTTATTTGPPTPGLPK 214

DUF4045

pfam13254

Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ...

687-820

3.59e-03

Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.

Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 40.54 E-value: 3.59e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 687 SPVQAPTPVqsSTPSSEPTQVPTPSSSESYQAPNLSPVQAPTPVQAPTTSSETSQVPTPSSESNQSPSQAPTPILEPVHA 766
Cdd:pfam13254 198 NSFKEVTPV--GLMRSPAPGGHSKSPSVSGISADSSPTKEEPSEEADTLSTDKEQSPAPTSASEPPPKTKELPKDSEEPA 275

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1063694145 767 PTPNSKPVQSPTPSSEPVSSPEQSEEVEAP---EPTPVNPSSVPSSSPSTDTSIPPP 820
Cdd:pfam13254 276 APSKSAEASTEKKEPDTESSPETSSEKSAPsllSPVSKASIDKPLSSPDRDPLSPKP 332

PRK12727

flagellar biosynthesis protein FlhF;

657-799

3.79e-03

flagellar biosynthesis protein FlhF;

Pssm-ID: 237182 [Multi-domain] Cd Length: 559 Bit Score: 40.74 E-value: 3.79e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 657 APTPtQAPTPSSETTQVPTP-SSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTpsssesyQAPnlspvqAPTPVQAPTT 735
Cdd:PRK12727   70 APAP-QAPTKPAAPVHAPLKlSANANMSQRQRVASAAEDMIAAMALRQPVSVPR-------QAP------AAAPVRAASI 135

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063694145 736 SSETSQVPTPSSESNQSPSQ--APTPILEPVHAPTPNSKPVQSPTPSSEPVSSPEQSEEVEAPEPT 799
Cdd:PRK12727  136 PSPAAQALAHAAAVRTAPRQehALSAVPEQLFADFLTTAPVPRAPVQAPVVAAPAPVPAIAAALAA 201

PRK04654

sec-independent translocase; Provisional

697-799

4.06e-03

sec-independent translocase; Provisional

Pssm-ID: 135173 [Multi-domain] Cd Length: 214 Bit Score: 39.80 E-value: 4.06e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 697 SSTPSSEPTQVPTPSSSESYQ-------APNLSPVQAPTPVQAPTTSSETSQVPTPSSESNQSPSQAPTPILEPVHAPTP 769
Cdd:PRK04654  104 SATPVATPLELAHADLSASAQvdaaagaEPGAGQAHTPVPAPAPVIAQAQPIAPAPHQTLVPAPHDTIVPAPHAAHLPSA 183

                          90       100       110
                  ....*....|....*....|....*....|
gi 1063694145 770 NSKPVQSPTPSSEPVSSPEQSEEVEAPEPT 799
Cdd:PRK04654  184 PATPVSVAPVDAGTSASPTPSEPTKIQEKQ 213

PTZ00249

variable surface protein Vir28; Provisional

652-798

4.90e-03

variable surface protein Vir28; Provisional

Pssm-ID: 140276 [Multi-domain] Cd Length: 516 Bit Score: 40.40 E-value: 4.90e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 652 QPP--MGAPTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSE-----PTQVPTPSSSESYqapnLSPV 724
Cdd:PTZ00249  238 RPPkhISFSSPHAHGRPPVETRPPNPVSVSSPQAHGRHPGETHTPPLVTVPSSKahdrnPVQTPTPTSVSGY----SSQA 313

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1063694145 725 QApTPVQAPTTSSETSQVPtpssesnqsPSQAPTPIlepvhaptpnskPVQSPTPSSEPVSSPEQSEEVEAPEP 798
Cdd:PTZ00249  314 KG-LEKQAGGESERTSSVP---------SEQFPLPL------------PVLLPLGQSGPLESSESEETDEYAGP 365

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

446-512

4.97e-03

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.05 E-value: 4.97e-03

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1063694145 446 ESPKPEEPENKHELPKQKESPKPQPSKPEDSPKPEQPKPEESPKPEQPQIPEPTKPVSPPNEAQGPT 512
Cdd:PTZ00144  122 GAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPR 188

PLN03150

hypothetical protein; Provisional

289-340

5.17e-03

hypothetical protein; Provisional

Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 40.57 E-value: 5.17e-03

                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063694145 289 GFVGSLPSTLSGLASVEQLDLSHNKLTGFVVDKFCKLPNLDSFKFSYNFFNG 340
Cdd:PLN03150  429 GLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNG 480

PRK10263

DNA translocase FtsK; Provisional

694-852

6.15e-03

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 40.45 E-value: 6.15e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  694 PVQSSTPSSEPTQVPTPSSS--ESYQAPnLSPVQAPTPVQAPTTSSETSQV---PTPSSESNQsPSQAP-----TPILEP 763
Cdd:PRK10263   309 PLLNGAPITEPVAVAAAATTatQSWAAP-VEPVTQTPPVASVDVPPAQPTVawqPVPGPQTGE-PVIAPapegyPQQSQY 386

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  764 VHAPTPNSKPVQSPTPSSEPVSSPEQSEEVEAPEPTPVNPSSVPSSSPSTDTSIPPPENNDDDDDGDFVLPPHIGFQYAS 843
Cdd:PRK10263   387 AQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQ 466

                          170
                   ....*....|
gi 1063694145  844 P-PPPMFQGY 852
Cdd:PRK10263   467 TyQQPAAQEP 476

PRK14948

DNA polymerase III subunit gamma/tau;

649-783

6.41e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 39.95 E-value: 6.41e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 649 NTNQPPMGAPTPTQAPTPSSETTQVPTPSSESDQ-SQILSPVQAPTP-----------------------------VQSS 698
Cdd:PRK14948  411 ASPPIPVPAEPTEPSPTPPANAANAPPSLNLEELwQQILAKLELPSTrmllsqqaelvsldsnraviavspnwlgmVQSR 490

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 699 TP-------------------SSEPTQVPTPSSSESYQAPNLSPVQAPTPVQAPTTSSETSQVPTPSSESNQSPSQAPTP 759
Cdd:PRK14948  491 KPlleqafakvlgrsiklnleSQSGSASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQI 570

                         170       180
                  ....*....|....*....|....
gi 1063694145 760 ILEPVHAPTPNSKPVQSPTPSSEP 783
Cdd:PRK14948  571 PADSSPPPPIPEEPTPSPTKDSSP 594

PRK14948

DNA polymerase III subunit gamma/tau;

727-799

6.75e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 39.95 E-value: 6.75e-03

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1063694145 727 PTPVQAPTTSSETSQVPTPSSESNQSPSQAPTPI-LEPVHAPTPNSKPVQSPTPSSEPVSSPEQSEEVEAPEPT 799
Cdd:PRK14948  361 PSAFISEIANASAPANPTPAPNPSPPPAPIQPSApKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAAN 434

PRK10263

DNA translocase FtsK; Provisional

408-534

6.92e-03

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 40.07 E-value: 6.92e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145  408 EPKPSKPEPVMPKPSDSSKPETPKTPEQPSPKPQPPKHESPKPEEP---ENKHELPKQKESPKPQPSKPEDSPKPEQPKP 484
Cdd:PRK10263   752 VQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPvapQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQ 831

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1063694145  485 EespkPEQPQIPEPTKPVSPP----NEAQGPTpDDPYDASPVKNRRSPPPPKVE 534
Cdd:PRK10263   832 Q----PQQPVAPQPQDTLLHPllmrNGDSRPL-HKPTTPLPSLDLLTPPPSEVE 880

DUF5585

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

657-819

7.08e-03

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 39.94 E-value: 7.08e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 657 APTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPNLSPVQAPTPVQAPTTS 736
Cdd:pfam17823 136 ALPSEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTA 215

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 737 SETSQVPTPSSESNQSPSQAPTPILEPVHAPTPNSKPVQSPTPSSEPVSSPEQSEEVEAPEPTPVNPSSVPSSSPSTDTS 816
Cdd:pfam17823 216 ATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDPHARRLSPAKHMPSDTMARNP 295


                  ...
gi 1063694145 817 IPP 819
Cdd:pfam17823 296 AAP 298

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

650-778

7.54e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 39.79 E-value: 7.54e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 650 TNQPPMGAPTPTQA-PTPSSETTQVPTPSSESdqsqilSPVQAPTPVQsSTPSSEPTQVPTPSSSESyqAPNLSPVQAPT 728
Cdd:PRK14950  368 PAKPTAAAPSPVRPtPAPSTRPKAAAAANIPP------KEPVRETATP-PPVPPRPVAPPVPHTPES--APKLTRAAIPV 438

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1063694145 729 PVQApttsseTSQVPTPSSESnQSPSQAPTPILEPVHAPTPNSK---PVQSPT 778
Cdd:PRK14950  439 DEKP------KYTPPAPPKEE-EKALIADGDVLEQLEAIWKQILrdvPPRSPA 484

PRK10819

transport protein TonB; Provisional

406-529

7.63e-03

transport protein TonB; Provisional

Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 38.90 E-value: 7.63e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 406 TSEPKPSKPEP---VMPKPSDSSKPETPKtpeqpsPKPQPPKHESPKPEepenkhelPKQKesPKPQPSKpedsPKPEQP 482
Cdd:PRK10819   58 LEPPQAVQPPPepvVEPEPEPEPIPEPPK------EAPVVIPKPEPKPK--------PKPK--PKPKPVK----KVEEQP 117

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1063694145 483 KPEESPKPEQPQIP----EPTKPVSPPNEAQGPTPDDPYDASPVKNRRSPP 529
Cdd:PRK10819  118 KREVKPVEPRPASPfentAPARPTSSTATAAASKPVTSVSSGPRALSRNQP 168

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

680-757

7.81e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 39.49 E-value: 7.81e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 680 SDQSQILSPVQAPTPVQSST--PSSEPTQVPTPSSSESyQAPNLSPVQAPTPVQAP-TTSSETSQVPTPSSESNQSPSQA 756
Cdd:TIGR00601  65 KEKDFVVVMVSKPKTGTGKVapPAATPTSAPTPTPSPP-ASPASGMSAAPASAVEEkSPSEESATATAPESPSTSVPSSG 143


                  .
gi 1063694145 757 P 757
Cdd:TIGR00601 144 S 144

PLN03209

translocon at the inner envelope of chloroplast subunit 62; Provisional

660-799

7.94e-03

translocon at the inner envelope of chloroplast subunit 62; Provisional

Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 39.91 E-value: 7.94e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 660 PTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTP-VQSSTPSSEPTQVPTPSS---SESYQAPNLSPVQAPTP---VQA 732
Cdd:PLN03209  382 PPTSPIPTPPSSSPASSKSVDAVAKPAEPDVVPSPgSASNVPEVEPAQVEAKKTrplSPYARYEDLKPPTSPSPtapTGV 461

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1063694145 733 PTTSSETSQVP--------TPSSESNQSPSQAPTPI---LEPVHAPTPNSKPVQSPTPSSEPVSSPEQSEEVEAPEPT 799
Cdd:PLN03209  462 SPSVSSTSSVPavpdtapaTAATDAAAPPPANMRPLspyAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPT 539

PRK07003

DNA polymerase III subunit gamma/tau;

652-823

8.33e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 39.83 E-value: 8.33e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 652 QPPMGAPTPTQAPTPSSETTQVPTPSsesdqsqilsPVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPNLSPVQAPTPVQ 731
Cdd:PRK07003  359 EPAVTGGGAPGGGVPARVAGAVPAPG----------ARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPA 428

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 732 APTtssetsqvPTPSSESNQSPSQAPTPIlePVHAPTPNSKPVQSPTPSSEPVSSPEQSEEVEAPEPTPVNPSSVPSSSP 811
Cdd:PRK07003  429 APA--------PPATADRGDDAADGDAPV--PAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAA 498

                         170
                  ....*....|..
gi 1063694145 812 STDTSIPPPENN 823
Cdd:PRK07003  499 PSAATPAAVPDA 510

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

405-535

8.41e-03

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 39.37 E-value: 8.41e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063694145 405 RTSEPKPSKPEPVMPK--PSDSSKPETPKTPEQPSPKPQPPKHESPKPEEP-----ENKHELPKQKESPKPQPSKPEDSP 477
Cdd:NF040712  210 ADARPEEVEPAPAAEGapATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVgpgaaPAAEPDEATRDAGEPPAPGAAETP 289

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1063694145 478 KPEQPKPEESPKPEQPQIPEPTKPVSPpnEAQGPTPddpydasPVKNRRSPPPPKVED 535
Cdd:NF040712  290 EAAEPPAPAPAAPAAPAAPEAEEPARP--EPPPAPK-------PKRRRRRASVPSWDD 338

DUF5585