HNH endonuclease [Arabidopsis thaliana]
Protein Classification
HNH endonuclease signature motif containing protein( domain architecture ID 10052677)
HNH endonuclease signature motif containing protein which may catalyze the hydrolysis of DNA
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| HNHc | cd00085 | HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic ... |
162-203 | 3.38e-04 | ||
HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and anaredoxins. : Pssm-ID: 238038 [Multi-domain] Cd Length: 57 Bit Score: 37.45 E-value: 3.38e-04
|
||||||
| Name | Accession | Description | Interval | E-value | ||
| HNHc | cd00085 | HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic ... |
162-203 | 3.38e-04 | ||
HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and anaredoxins. Pssm-ID: 238038 [Multi-domain] Cd Length: 57 Bit Score: 37.45 E-value: 3.38e-04
|
||||||
| McrA | COG1403 | 5-methylcytosine-specific restriction endonuclease McrA [Defense mechanisms]; |
176-203 | 5.20e-04 | ||
5-methylcytosine-specific restriction endonuclease McrA [Defense mechanisms]; Pssm-ID: 441013 [Multi-domain] Cd Length: 64 Bit Score: 37.27 E-value: 5.20e-04
|
||||||
| HNH | pfam01844 | HNH endonuclease; His-Asn-His (HNH) proteins are a very common family of small nucleic ... |
170-203 | 1.81e-03 | ||
HNH endonuclease; His-Asn-His (HNH) proteins are a very common family of small nucleic acid-binding proteins that are generally associated with endonuclease activity. Pssm-ID: 396422 [Multi-domain] Cd Length: 47 Bit Score: 35.02 E-value: 1.81e-03
|
||||||
| HNHc | smart00507 | HNH nucleases; |
161-198 | 2.36e-03 | ||
HNH nucleases; Pssm-ID: 214702 [Multi-domain] Cd Length: 52 Bit Score: 35.13 E-value: 2.36e-03
|
||||||
| Name | Accession | Description | Interval | E-value | ||
| HNHc | cd00085 | HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic ... |
162-203 | 3.38e-04 | ||
HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and anaredoxins. Pssm-ID: 238038 [Multi-domain] Cd Length: 57 Bit Score: 37.45 E-value: 3.38e-04
|
||||||
| McrA | COG1403 | 5-methylcytosine-specific restriction endonuclease McrA [Defense mechanisms]; |
176-203 | 5.20e-04 | ||
5-methylcytosine-specific restriction endonuclease McrA [Defense mechanisms]; Pssm-ID: 441013 [Multi-domain] Cd Length: 64 Bit Score: 37.27 E-value: 5.20e-04
|
||||||
| HNH | pfam01844 | HNH endonuclease; His-Asn-His (HNH) proteins are a very common family of small nucleic ... |
170-203 | 1.81e-03 | ||
HNH endonuclease; His-Asn-His (HNH) proteins are a very common family of small nucleic acid-binding proteins that are generally associated with endonuclease activity. Pssm-ID: 396422 [Multi-domain] Cd Length: 47 Bit Score: 35.02 E-value: 1.81e-03
|
||||||
| HNHc | smart00507 | HNH nucleases; |
161-198 | 2.36e-03 | ||
HNH nucleases; Pssm-ID: 214702 [Multi-domain] Cd Length: 52 Bit Score: 35.13 E-value: 2.36e-03
|
||||||
| Blast search parameters | ||||
|
