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Conserved domains on  [gi|1063722140|ref|NP_001328364|]
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Flavin-binding monooxygenase family protein [Arabidopsis thaliana]

Protein Classification

flavin-containing monooxygenase( domain architecture ID 11449697)

flavin-containing monooxygenase (FMO) catalyses the flavin-dependent oxidation of ketones and cyclic ketones to esters and lactones, by using molecular oxygen and NAD(P)H.

CATH:  3.50.50.60
Gene Ontology:  GO:0016709|GO:0004497|GO:0050660
PubMed:  20015679|33588053

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 29-311 5.19e-67

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


:

Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 215.11  E-value: 5.19e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140  29 IIVGSGPSGLATAACLKSRDIPSLILERSTCIASLWQHKTYDRLRLHLPKDFCELPLMPFPSSYPTYPTKQQFVQYLESY 108
Cdd:COG2072    10 VVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTWRDNRYPGLRLDTPSHLYSLPFFPNWSDDPDFPTGDEILAYLEAY 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140 109 AEHFDLKP--VFNQTVEEAKFDRRCGLWRVRTTGGKkdetmEYVSRWLVVATGENAEEVMPEIDGIPDFGGPILHTSSYK 186
Cdd:COG2072    90 ADKFGLRRpiRFGTEVTSARWDEADGRWTVTTDDGE-----TLTARFVVVATGPLSRPKIPDIPGLEDFAGEQLHSADWR 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140 187 SGEIFSEKKILVVGCGNSGMEVCLDLCNFNALPSLVVRDSVHVLPQ----EMLGISTFGISTSLLKWFPVHVVDRFLLRM 262
Cdd:COG2072   165 NPVDLAGKRVLVVGTGASAVQIAPELARVAAHVTVFQRTPPWVLPRpnydPERGRPANYLGLEAPPALNRRDARAWLRRL 244

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1063722140 263 SRLVLGDTDrLGLVRPKLGPLerkikcGKTPVLDVGTLAKIRSGHIKVH 311
Cdd:COG2072   245 LRAQVKDPE-LGLLTPDYPPG------CKRPLLSTDYYEALRRGNVELV 286
 
Name Accession Description Interval E-value
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 29-311 5.19e-67

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 215.11  E-value: 5.19e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140  29 IIVGSGPSGLATAACLKSRDIPSLILERSTCIASLWQHKTYDRLRLHLPKDFCELPLMPFPSSYPTYPTKQQFVQYLESY 108
Cdd:COG2072    10 VVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTWRDNRYPGLRLDTPSHLYSLPFFPNWSDDPDFPTGDEILAYLEAY 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140 109 AEHFDLKP--VFNQTVEEAKFDRRCGLWRVRTTGGKkdetmEYVSRWLVVATGENAEEVMPEIDGIPDFGGPILHTSSYK 186
Cdd:COG2072    90 ADKFGLRRpiRFGTEVTSARWDEADGRWTVTTDDGE-----TLTARFVVVATGPLSRPKIPDIPGLEDFAGEQLHSADWR 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140 187 SGEIFSEKKILVVGCGNSGMEVCLDLCNFNALPSLVVRDSVHVLPQ----EMLGISTFGISTSLLKWFPVHVVDRFLLRM 262
Cdd:COG2072   165 NPVDLAGKRVLVVGTGASAVQIAPELARVAAHVTVFQRTPPWVLPRpnydPERGRPANYLGLEAPPALNRRDARAWLRRL 244

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1063722140 263 SRLVLGDTDrLGLVRPKLGPLerkikcGKTPVLDVGTLAKIRSGHIKVH 311
Cdd:COG2072   245 LRAQVKDPE-LGLLTPDYPPG------CKRPLLSTDYYEALRRGNVELV 286
FMO-like pfam00743
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ...
 30-250 3.38e-19

Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.


Pssm-ID: 395602 [Multi-domain]  Cd Length: 531  Bit Score: 87.53  E-value: 3.38e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140  30 IVGSGPSGLATAACLKSRDIPSLILERSTCIASLWQHK---------TYDRLRLHLPKDFCELPLMPFPSSYPTYPTKQQ 100
Cdd:pfam00743   6 VIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWRFTenveegrasIYKSVITNTSKEMSCFSDFPFPEDYPNFMHNSK 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140 101 FVQYLESYAEHFDL-KPV-FNQTVEEAKfdrRC------GLWRVRT-TGGKKDETmeyVSRWLVVATGENAEEVMP--EI 169
Cdd:pfam00743  86 FLEYFRMFAKEFDLlKYIqFKTTVCSVK---KRpdfstsGQWEVVTeHEGKQESA---VFDAVMVCTGHHTNPHLPleSF 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140 170 DGIPDFGGPILHTSSYKSGEIFSEKKILVVGCGNSGMEVCLDLCNFNALPSLVVRDSVHVL--------PQEMLGISTFG 241
Cdd:pfam00743 160 PGIEKFKGQYFHSRDYKHPEGFTGKRVLVIGIGNSGGDIAVELSHTAAQVFLSTRRGSWVLsrvsdhgyPWDMLFSTRFT 239

                         250
                  ....*....|....*
gi 1063722140 242 ------ISTSLLKWF 250
Cdd:pfam00743 240 sflrniLPTSISNWL 254
PLN02172 PLN02172
flavin-containing monooxygenase FMO GS-OX
 30-212 1.08e-11

flavin-containing monooxygenase FMO GS-OX


Pssm-ID: 215116 [Multi-domain]  Cd Length: 461  Bit Score: 65.27  E-value: 1.08e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140  30 IVGSGPSGLATAACLKSRDIPSLILERSTCIASLWQH--------------------KTYDRLRLHLP------KDFCEL 83
Cdd:PLN02172   15 VIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWVYtpksesdplsldptrsivhsSVYESLRTNLPrecmgyRDFPFV 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140  84 PLMPFPSSYPT-YPTKQQFVQYLESYAEHFDLKPVFNQTVEEAKFDRRCGLWRVR--TTGG-KKDETMEYVsrwlVVATG 159
Cdd:PLN02172   95 PRFDDESRDSRrYPSHREVLAYLQDFAREFKIEEMVRFETEVVRVEPVDGKWRVQskNSGGfSKDEIFDAV----VVCNG 170

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1063722140 160 ENAEEVMPEIDGIPDFGGPILHTSSYKSGEIFSEKKILVVGCGNSGMEVCLDL 212
Cdd:PLN02172  171 HYTEPNVAHIPGIKSWPGKQIHSHNYRVPDPFKNEVVVVIGNFASGADISRDI 223
 
Name Accession Description Interval E-value
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 29-311 5.19e-67

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 215.11  E-value: 5.19e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140  29 IIVGSGPSGLATAACLKSRDIPSLILERSTCIASLWQHKTYDRLRLHLPKDFCELPLMPFPSSYPTYPTKQQFVQYLESY 108
Cdd:COG2072    10 VVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTWRDNRYPGLRLDTPSHLYSLPFFPNWSDDPDFPTGDEILAYLEAY 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140 109 AEHFDLKP--VFNQTVEEAKFDRRCGLWRVRTTGGKkdetmEYVSRWLVVATGENAEEVMPEIDGIPDFGGPILHTSSYK 186
Cdd:COG2072    90 ADKFGLRRpiRFGTEVTSARWDEADGRWTVTTDDGE-----TLTARFVVVATGPLSRPKIPDIPGLEDFAGEQLHSADWR 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140 187 SGEIFSEKKILVVGCGNSGMEVCLDLCNFNALPSLVVRDSVHVLPQ----EMLGISTFGISTSLLKWFPVHVVDRFLLRM 262
Cdd:COG2072   165 NPVDLAGKRVLVVGTGASAVQIAPELARVAAHVTVFQRTPPWVLPRpnydPERGRPANYLGLEAPPALNRRDARAWLRRL 244

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1063722140 263 SRLVLGDTDrLGLVRPKLGPLerkikcGKTPVLDVGTLAKIRSGHIKVH 311
Cdd:COG2072   245 LRAQVKDPE-LGLLTPDYPPG------CKRPLLSTDYYEALRRGNVELV 286
FMO-like pfam00743
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ...
 30-250 3.38e-19

Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.


Pssm-ID: 395602 [Multi-domain]  Cd Length: 531  Bit Score: 87.53  E-value: 3.38e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140  30 IVGSGPSGLATAACLKSRDIPSLILERSTCIASLWQHK---------TYDRLRLHLPKDFCELPLMPFPSSYPTYPTKQQ 100
Cdd:pfam00743   6 VIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWRFTenveegrasIYKSVITNTSKEMSCFSDFPFPEDYPNFMHNSK 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140 101 FVQYLESYAEHFDL-KPV-FNQTVEEAKfdrRC------GLWRVRT-TGGKKDETmeyVSRWLVVATGENAEEVMP--EI 169
Cdd:pfam00743  86 FLEYFRMFAKEFDLlKYIqFKTTVCSVK---KRpdfstsGQWEVVTeHEGKQESA---VFDAVMVCTGHHTNPHLPleSF 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140 170 DGIPDFGGPILHTSSYKSGEIFSEKKILVVGCGNSGMEVCLDLCNFNALPSLVVRDSVHVL--------PQEMLGISTFG 241
Cdd:pfam00743 160 PGIEKFKGQYFHSRDYKHPEGFTGKRVLVIGIGNSGGDIAVELSHTAAQVFLSTRRGSWVLsrvsdhgyPWDMLFSTRFT 239

                         250
                  ....*....|....*
gi 1063722140 242 ------ISTSLLKWF 250
Cdd:pfam00743 240 sflrniLPTSISNWL 254
Pyr_redox_3 pfam13738
Pyridine nucleotide-disulphide oxidoreductase;
35-227 3.84e-18

Pyridine nucleotide-disulphide oxidoreductase;


Pssm-ID: 404603 [Multi-domain]  Cd Length: 296  Bit Score: 82.66  E-value: 3.84e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140  35 PSGLATAACLKSRDIPS-LILERSTCIASLWQHKTYDRLrlhLPKDFC----ELPLMPF--PSSYPT------YPTKQQF 101
Cdd:pfam13738   1 PAGIGCAIALKKAGLEDyLILEKGNIGNSFYRYPTHMTF---FSPSFTsngfGIPDLNAisPGTSPAftfnreHPSGNEY 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140 102 VQYLESYAEHFDLKPVFNQTVEeaKFDRRCGLWRVRTTGGkkdetmEYVSRWLVVATGENAEEVMPeidGIPDFGgpiLH 181
Cdd:pfam13738  78 AEYLRRVADHFELPINLFEEVT--SVKKEDDGFVVTTSKG------TYQARYVIIATGEFDFPNKL---GVPELP---KH 143

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 1063722140 182 TSSYKSGEIFSEKKILVVGCGNSGMEVCLDLCNFNALPSLVVRDSV 227
Cdd:pfam13738 144 YSYVKDFHPYAGQKVVVIGGYNSAVDAALELVRKGARVTVLYRGSE 189
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
29-224 1.16e-15

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 75.93  E-value: 1.16e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140  29 IIVGSGPSGLATAACLKSRDIPSLILERSTCIASLWQ-HKTYDrlrlhlpkdfcelplmpfpssYPTYPTK---QQFVQY 104
Cdd:COG0492     4 VIIGAGPAGLTAAIYAARAGLKTLVIEGGEPGGQLATtKEIEN---------------------YPGFPEGisgPELAER 62

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140 105 LESYAEHFDLKpVFNQTVEEAKFDRrcGLWRVRTTGGKkdetmEYVSRWLVVATGenAEEVMPEIDGIPDFGGPILHTSS 184
Cdd:COG0492    63 LREQAERFGAE-ILLEEVTSVDKDD--GPFRVTTDDGT-----EYEAKAVIIATG--AGPRKLGLPGEEEFEGRGVSYCA 132

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1063722140 185 YKSGEIFSEKKILVVGCGNSGMEVCLDLCNFNALPSLVVR 224
Cdd:COG0492   133 TCDGFFFRGKDVVVVGGGDSALEEALYLTKFASKVTLIHR 172
Lys_Orn_oxgnase pfam13434
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase; This is a family of Rossmann fold ...
 95-212 3.87e-14

L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase; This is a family of Rossmann fold oxidoreductases that catalyze NADPH-dependent hydroxylation and are involved in siderophore biosynthesis. This family includes L-ornithine 5-monooxygenase, which catalyzes the hydroxylation of L-ornithine at the N5 position, and L-lysine 6-monooxygenase, which catalyzes the hydroxylation of lysine at the N6 position (EC:1.14.13.59).


Pssm-ID: 433204 [Multi-domain]  Cd Length: 338  Bit Score: 71.85  E-value: 3.87e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140  95 YPTKQQFVQYLESYAEHFDLKPVFNQTVEEAKFDRRCG--LWRVRTTGGKKDETmEYVSRWLVVATGenaeeVMPEidgI 172
Cdd:pfam13434  91 FPSRREFNDYLQWAASHLPNRLRFGQEVESVEPDAERGepLLRVRVRDADGEET-TFLARNLVLGTG-----GEPY---I 161

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1063722140 173 PDF---GGPILHTSSY--KSGEIFSEKKILVVGCGNSGMEVCLDL 212
Cdd:pfam13434 162 PECargGERVFHSSEYleRIDRLAAKKRIAVVGSGQSAAEIFRDL 206
IucD COG3486
Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport and catabolism] ...
 95-212 2.26e-13

Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442709 [Multi-domain]  Cd Length: 440  Bit Score: 70.20  E-value: 2.26e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140  95 YPTKQQFVQYLESYAEHFDlKPVFNQTVEEAKFDRRCGLWRVRTTGGKkDETMEYVSRWLVVATGenAEEVMPE-IDGIP 173
Cdd:COG3486    95 FPLRREYNDYCRWAAEQLD-NVRFGTEVEAVEYDDDAGAFRVTVRDGT-GERETYRARNLVLGTG--TRPYLPEcFRGLP 170

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1063722140 174 dfGGPILHTSSY--KSGEIFSEKKILVVGCGNSGMEVCLDL 212
Cdd:COG3486   171 --GERVFHSSEYlhRKEDLQAAKRVTVVGSGQSAAEIFLDL 209
PLN02172 PLN02172
flavin-containing monooxygenase FMO GS-OX
 30-212 1.08e-11

flavin-containing monooxygenase FMO GS-OX


Pssm-ID: 215116 [Multi-domain]  Cd Length: 461  Bit Score: 65.27  E-value: 1.08e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140  30 IVGSGPSGLATAACLKSRDIPSLILERSTCIASLWQH--------------------KTYDRLRLHLP------KDFCEL 83
Cdd:PLN02172   15 VIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWVYtpksesdplsldptrsivhsSVYESLRTNLPrecmgyRDFPFV 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140  84 PLMPFPSSYPT-YPTKQQFVQYLESYAEHFDLKPVFNQTVEEAKFDRRCGLWRVR--TTGG-KKDETMEYVsrwlVVATG 159
Cdd:PLN02172   95 PRFDDESRDSRrYPSHREVLAYLQDFAREFKIEEMVRFETEVVRVEPVDGKWRVQskNSGGfSKDEIFDAV----VVCNG 170

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1063722140 160 ENAEEVMPEIDGIPDFGGPILHTSSYKSGEIFSEKKILVVGCGNSGMEVCLDL 212
Cdd:PLN02172  171 HYTEPNVAHIPGIKSWPGKQIHSHNYRVPDPFKNEVVVVIGNFASGADISRDI 223
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 29-238 1.24e-07

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 52.32  E-value: 1.24e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140  29 IIVGSGPSGLATAACLKSRDIP-SLILERSTCiaslwqhkTYDRLRLHlpKDFCElplmpFPSSYPTYPTKQQFVQYLES 107
Cdd:pfam07992   4 VVIGGGPAGLAAALTLAQLGGKvTLIEDEGTC--------PYGGCVLS--KALLG-----AAEAPEIASLWADLYKRKEE 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722140 108 YAEHFDLKPVFNQTVEEAKFDRRCGlwRVRTTGGKKDETMEYVSRWLVVATGenAEEVMPEIDGIPDFGGPILHTssYKS 187
Cdd:pfam07992  69 VVKKLNNGIEVLLGTEVVSIDPGAK--KVVLEELVDGDGETITYDRLVIATG--ARPRLPPIPGVELNVGFLVRT--LDS 142

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063722140 188 GEIFS----EKKILVVGCGNSGMEVCLDLCNFNALPSLVVRdSVHVLPQEMLGIS 238
Cdd:pfam07992 143 AEALRlkllPKRVVVVGGGYIGVELAAALAKLGKEVTLIEA-LDRLLRAFDEEIS 196
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 29-58 6.21e-04

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 41.08  E-value: 6.21e-04
                          10        20        30
                  ....*....|....*....|....*....|
gi 1063722140  29 IIVGSGPSGLATAACLKSRDIPSLILERST 58
Cdd:COG0654     7 LIVGGGPAGLALALALARAGIRVTVVERAP 36
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
30-56 1.94e-03

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 35.97  E-value: 1.94e-03
                          10        20
                  ....*....|....*....|....*..
gi 1063722140  30 IVGSGPSGLATAACLKSRDIPSLILER 56
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEK 27
PRK08132 PRK08132
FAD-dependent oxidoreductase; Provisional
 29-61 2.99e-03

FAD-dependent oxidoreductase; Provisional


Pssm-ID: 236158 [Multi-domain]  Cd Length: 547  Bit Score: 39.08  E-value: 2.99e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1063722140  29 IIVGSGPSGLATAACLKSRDIPSLILE---------RSTCIA 61
Cdd:PRK08132   27 VVVGAGPVGLALAIDLAQQGVPVVLLDdddtlstgsRAICFA 68
PRK06126 PRK06126
hypothetical protein; Provisional
 29-56 3.96e-03

hypothetical protein; Provisional


Pssm-ID: 235704 [Multi-domain]  Cd Length: 545  Bit Score: 38.82  E-value: 3.96e-03
                          10        20
                  ....*....|....*....|....*...
gi 1063722140  29 IIVGSGPSGLATAACLKSRDIPSLILER 56
Cdd:PRK06126   11 LIVGGGPVGLALALDLGRRGVDSILVER 38
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 29-57 5.66e-03

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 38.27  E-value: 5.66e-03
                          10        20
                  ....*....|....*....|....*....
gi 1063722140  29 IIVGSGPSGLATAACLKSRDIPSLILERS 57
Cdd:COG1232     5 AVIGGGIAGLTAAYRLAKAGHEVTVLEAS 33
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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