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Conserved domains on  [gi|1972265573|ref|NP_001379046|]
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FAM161 homolog famh-136 [Caenorhabditis elegans]

Protein Classification

FAM136 family protein( domain architecture ID 10530719)

FAM136 family protein is a DUF842 domain-containing protein similar to Homo sapiens protein FAM136A

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF842 pfam05811
Eukaryotic protein of unknown function (DUF842); This family consists of a number of conserved ...
 10-137 6.77e-48

Eukaryotic protein of unknown function (DUF842); This family consists of a number of conserved eukaryotic proteins of unknown function. The sequences carry three sets of CxxxC motifs, which might suggest a type of zinc-finger formation.


:

Pssm-ID: 461747  Cd Length: 126  Bit Score: 150.51  E-value: 6.77e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972265573  10 QMKVKLAVDEMIDDLDKTYLRDMQKSMFQCSARCCDNKKTTRDAVENCVESCNDGMKKAQGYLEKELGGLQDQLSRCAMT 89
Cdd:pfam05811   2 QERVQSAVQKMLDDLDKHYLRKLQKDMFKCAAKCCDDRDASQEEVQNCVERCSQPLTKAQNYVQNELEQFQERLQRCVMV 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1972265573  90 CYDKLVQQFGPDVnkySESQKLSFNEKLDSCVSVCADDHIKLIPAIKK 137
Cdd:pfam05811  82 CQDKAKDKFGPNP---SEKDVAKAQKQLESCVVKCVDEHIKLLPKIVK 126
 
Name Accession Description Interval E-value
DUF842 pfam05811
Eukaryotic protein of unknown function (DUF842); This family consists of a number of conserved ...
 10-137 6.77e-48

Eukaryotic protein of unknown function (DUF842); This family consists of a number of conserved eukaryotic proteins of unknown function. The sequences carry three sets of CxxxC motifs, which might suggest a type of zinc-finger formation.


Pssm-ID: 461747  Cd Length: 126  Bit Score: 150.51  E-value: 6.77e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972265573  10 QMKVKLAVDEMIDDLDKTYLRDMQKSMFQCSARCCDNKKTTRDAVENCVESCNDGMKKAQGYLEKELGGLQDQLSRCAMT 89
Cdd:pfam05811   2 QERVQSAVQKMLDDLDKHYLRKLQKDMFKCAAKCCDDRDASQEEVQNCVERCSQPLTKAQNYVQNELEQFQERLQRCVMV 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1972265573  90 CYDKLVQQFGPDVnkySESQKLSFNEKLDSCVSVCADDHIKLIPAIKK 137
Cdd:pfam05811  82 CQDKAKDKFGPNP---SEKDVAKAQKQLESCVVKCVDEHIKLLPKIVK 126
 
Name Accession Description Interval E-value
DUF842 pfam05811
Eukaryotic protein of unknown function (DUF842); This family consists of a number of conserved ...
 10-137 6.77e-48

Eukaryotic protein of unknown function (DUF842); This family consists of a number of conserved eukaryotic proteins of unknown function. The sequences carry three sets of CxxxC motifs, which might suggest a type of zinc-finger formation.


Pssm-ID: 461747  Cd Length: 126  Bit Score: 150.51  E-value: 6.77e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972265573  10 QMKVKLAVDEMIDDLDKTYLRDMQKSMFQCSARCCDNKKTTRDAVENCVESCNDGMKKAQGYLEKELGGLQDQLSRCAMT 89
Cdd:pfam05811   2 QERVQSAVQKMLDDLDKHYLRKLQKDMFKCAAKCCDDRDASQEEVQNCVERCSQPLTKAQNYVQNELEQFQERLQRCVMV 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1972265573  90 CYDKLVQQFGPDVnkySESQKLSFNEKLDSCVSVCADDHIKLIPAIKK 137
Cdd:pfam05811  82 CQDKAKDKFGPNP---SEKDVAKAQKQLESCVVKCVDEHIKLLPKIVK 126
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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