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Conserved domains on  [gi|1972266719|ref|NP_001379692|]
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Protein-tyrosine phosphatase [Caenorhabditis elegans]

Protein Classification

protein tyrosine phosphatase family protein( domain architecture ID 12193126)

cys-based protein tyrosine phosphatase (PTP) family protein, such as tyrosine-protein phosphatase that catalyzes the dephosphorylation of phosphotyrosine groups in phosphoproteins

CATH:  3.90.190.10
EC:  3.1.3.-
Gene Ontology:  GO:0004721|GO:0006470
PubMed:  27514797|17057753

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PTPc smart00194
Protein tyrosine phosphatase, catalytic domain;
77-339 5.78e-100

Protein tyrosine phosphatase, catalytic domain;


:

Pssm-ID: 214550 [Multi-domain]  Cd Length: 259  Bit Score: 296.49  E-value: 5.78e-100
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719   77 KLRDEFRQMAKYTRPDMTQnaFNANQSANINetKNRYADVPCQDQNIV-LVAKPPAPSDYVHANFVGCPmVPDKRFICTQ 155
Cdd:smart00194   1 GLEEEFEKLDRLKPDDESC--TVAAFPENRD--KNRYKDVLPYDHTRVkLKPPPGEGSDYINASYIDGP-NGPKAYIATQ 75
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  156 GPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLAMGEKKEVkGGIVVENVSGTKPmdrdAEIQITTLQVSF 235
Cdd:smart00194  76 GPLPSTVEDFWRMVWEQKVTVIVMLTELVEKGREKCAQYWPDEEGEPLTY-GDITVTLKSVEKV----DDYTIRTLEVTN 150
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  236 GDQK--MSVRHLHWSDWPDRGVPPCKLTSLELLSAVR----GSRVPIVVHCSAGIGRTGTIVAIEYILERIAENKQcPPM 309
Cdd:smart00194 151 TGCSetRTVTHYHYTNWPDHGVPESPESILDLIRAVRksqsTSTGPIVVHCSAGVGRTGTFIAIDILLQQLEAGKE-VDI 229
                          250       260       270
                   ....*....|....*....|....*....|
gi 1972266719  310 PDLVKSLRDQRAYSIQTDMQYLYIHRVMLN 339
Cdd:smart00194 230 FEIVKELRSQRPGMVQTEEQYIFLYRAILE 259
 
Name Accession Description Interval E-value
PTPc smart00194
Protein tyrosine phosphatase, catalytic domain;
77-339 5.78e-100

Protein tyrosine phosphatase, catalytic domain;


Pssm-ID: 214550 [Multi-domain]  Cd Length: 259  Bit Score: 296.49  E-value: 5.78e-100
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719   77 KLRDEFRQMAKYTRPDMTQnaFNANQSANINetKNRYADVPCQDQNIV-LVAKPPAPSDYVHANFVGCPmVPDKRFICTQ 155
Cdd:smart00194   1 GLEEEFEKLDRLKPDDESC--TVAAFPENRD--KNRYKDVLPYDHTRVkLKPPPGEGSDYINASYIDGP-NGPKAYIATQ 75
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  156 GPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLAMGEKKEVkGGIVVENVSGTKPmdrdAEIQITTLQVSF 235
Cdd:smart00194  76 GPLPSTVEDFWRMVWEQKVTVIVMLTELVEKGREKCAQYWPDEEGEPLTY-GDITVTLKSVEKV----DDYTIRTLEVTN 150
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  236 GDQK--MSVRHLHWSDWPDRGVPPCKLTSLELLSAVR----GSRVPIVVHCSAGIGRTGTIVAIEYILERIAENKQcPPM 309
Cdd:smart00194 151 TGCSetRTVTHYHYTNWPDHGVPESPESILDLIRAVRksqsTSTGPIVVHCSAGVGRTGTFIAIDILLQQLEAGKE-VDI 229
                          250       260       270
                   ....*....|....*....|....*....|
gi 1972266719  310 PDLVKSLRDQRAYSIQTDMQYLYIHRVMLN 339
Cdd:smart00194 230 FEIVKELRSQRPGMVQTEEQYIFLYRAILE 259
Y_phosphatase pfam00102
Protein-tyrosine phosphatase;
107-339 6.34e-93

Protein-tyrosine phosphatase;


Pssm-ID: 459674 [Multi-domain]  Cd Length: 234  Bit Score: 277.97  E-value: 6.34e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 107 NETKNRYADVPCQDQNIVLVAKPPAPSDYVHANFVGCPMVPdKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIET 186
Cdd:pfam00102   1 NLEKNRYKDVLPYDHTRVKLTGDPGPSDYINASYIDGYKKP-KKYIATQGPLPNTVEDFWRMVWEEKVTIIVMLTELEEK 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 187 GKYKCAQYWPLAMGEKKEVkGGIVVENVSGTkpmDRDAEIQITTLQVSFGDQKMS--VRHLHWSDWPDRGVPPCKLTSLE 264
Cdd:pfam00102  80 GREKCAQYWPEEEGESLEY-GDFTVTLKKEK---EDEKDYTVRTLEVSNGGSEETrtVKHFHYTGWPDHGVPESPNSLLD 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 265 LLSAVR-----GSRVPIVVHCSAGIGRTGTIVAIEYILERIaENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHRVMLN 339
Cdd:pfam00102 156 LLRKVRkssldGRSGPIVVHCSAGIGRTGTFIAIDIALQQL-EAEGEVDIFQIVKELRSQRPGMVQTLEQYIFLYDAILE 234
PTPc cd00047
catalytic domain of protein tyrosine phosphatases; Protein tyrosine phosphatases (PTP, EC 3.1. ...
135-335 4.72e-70

catalytic domain of protein tyrosine phosphatases; Protein tyrosine phosphatases (PTP, EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr (pTyr) residues, instead of pSer or pThr. This family has a distinctive active site signature motif, HCSAGxGRxG, and are characterized as either transmembrane, receptor-like or non-transmembrane (soluble) PTPs. Receptor-like PTP domains tend to occur in two copies in the cytoplasmic region of the transmembrane proteins, only one copy may be active.


Pssm-ID: 350343 [Multi-domain]  Cd Length: 200  Bit Score: 218.31  E-value: 4.72e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 135 YVHANFVGCPMVPdKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLAMGEKKEvKGGIVVENV 214
Cdd:cd00047     1 YINASYIDGYRGP-KEYIATQGPLPNTVEDFWRMVWEQKVSVIVMLTNLVEKGREKCERYWPEEGGKPLE-YGDITVTLV 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 215 SgtkpMDRDAEIQITTLQVSFGDQKMS--VRHLHWSDWPDRGVPPCKLTSLELLSAVRGSRV----PIVVHCSAGIGRTG 288
Cdd:cd00047    79 S----EEELSDYTIRTLELSPKGCSESreVTHLHYTGWPDHGVPSSPEDLLALVRRVRKEARkpngPIVVHCSAGVGRTG 154
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1972266719 289 TIVAIEYILERIaENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHR 335
Cdd:cd00047   155 TFIAIDILLERL-EAEGEVDVFEIVKALRKQRPGMVQTLEQYEFIYE 200
PHA02742 PHA02742
protein tyrosine phosphatase; Provisional
97-340 3.17e-40

protein tyrosine phosphatase; Provisional


Pssm-ID: 165109 [Multi-domain]  Cd Length: 303  Bit Score: 144.37  E-value: 3.17e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  97 AFNANQS-ANINETKNRYADVPCQDQNIVLVAKPPAPSDYVHANFV-GCPMvpDKRFICTQGPLDHTVDDFWWMIVQQKV 174
Cdd:PHA02742   41 AFSCNESlELKNMKKCRYPDAPCFDRNRVILKIEDGGDDFINASYVdGHNA--KGRFICTQAPLEETALDFWQAIFQDQV 118
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 175 EQIVMLCKTIETGKYKCAQYWpLAMGEKKEVKGGIVVEnvsgTKPMDRDAEIQITTLQVSFGDQKMS--VRHLHWSDWPD 252
Cdd:PHA02742  119 RVIVMITKIMEDGKEACYPYW-MPHERGKATHGEFKIK----TKKIKSFRNYAVTNLCLTDTNTGASldIKHFAYEDWPH 193
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 253 RGVPPCKLTSLELLSAVR------------GSRV---PIVVHCSAGIGRTGTIVAIEYILERIAENKQCpPMPDLVKSLR 317
Cdd:PHA02742  194 GGLPRDPNKFLDFVLAVReadlkadvdikgENIVkepPILVHCSAGLDRAGAFCAIDICISKYNERAII-PLLSIVRDLR 272
                         250       260
                  ....*....|....*....|...
gi 1972266719 318 DQRAYSIQTDMQYLYIHRVMLNY 340
Cdd:PHA02742  273 KQRHNCLSLPQQYIFCYFIVLIF 295
COG5599 COG5599
Protein tyrosine phosphatase [Signal transduction mechanisms];
95-330 4.08e-31

Protein tyrosine phosphatase [Signal transduction mechanisms];


Pssm-ID: 444335 [Multi-domain]  Cd Length: 282  Bit Score: 119.43  E-value: 4.08e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  95 QNAFNAN----QSANINETKNRYADVPCQDQNIVlvakpPAPSDYVHANFVgcpMVPDK-RFICTQGPLDHTVDDFWWMI 169
Cdd:COG5599    26 ELAPSHNdpqyLQNINGSPLNRFRDIQPYKETAL-----RANLGYLNANYI---QVIGNhRYIATQYPLEEQLEDFFQML 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 170 VQQKVEQIVML--CKTIETGKYKCAQYWPLAmGEKKEVKggIVVENVSgTKPMDRDAEIQITTLQVSF-GDQKMSVRHLH 246
Cdd:COG5599    98 FDNNTPVLVVLasDDEISKPKVKMPVYFRQD-GEYGKYE--VSSELTE-SIQLRDGIEARTYVLTIKGtGQKKIEIPVLH 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 247 WSDWPD-RGVPPCKLTSL-----ELLSAVRGSRVPIVVHCSAGIGRTGTIVAIEYILERIAENKQCP-PMPDLVKSLRDQ 319
Cdd:COG5599   174 VKNWPDhGAISAEALKNLadlidKKEKIKDPDKLLPVVHCRAGVGRTGTLIACLALSKSINALVQITlSVEEIVIDMRTS 253
                         250
                  ....*....|..
gi 1972266719 320 RAYSI-QTDMQY 330
Cdd:COG5599   254 RNGGMvQTSEQL 265
 
Name Accession Description Interval E-value
PTPc smart00194
Protein tyrosine phosphatase, catalytic domain;
77-339 5.78e-100

Protein tyrosine phosphatase, catalytic domain;


Pssm-ID: 214550 [Multi-domain]  Cd Length: 259  Bit Score: 296.49  E-value: 5.78e-100
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719   77 KLRDEFRQMAKYTRPDMTQnaFNANQSANINetKNRYADVPCQDQNIV-LVAKPPAPSDYVHANFVGCPmVPDKRFICTQ 155
Cdd:smart00194   1 GLEEEFEKLDRLKPDDESC--TVAAFPENRD--KNRYKDVLPYDHTRVkLKPPPGEGSDYINASYIDGP-NGPKAYIATQ 75
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  156 GPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLAMGEKKEVkGGIVVENVSGTKPmdrdAEIQITTLQVSF 235
Cdd:smart00194  76 GPLPSTVEDFWRMVWEQKVTVIVMLTELVEKGREKCAQYWPDEEGEPLTY-GDITVTLKSVEKV----DDYTIRTLEVTN 150
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  236 GDQK--MSVRHLHWSDWPDRGVPPCKLTSLELLSAVR----GSRVPIVVHCSAGIGRTGTIVAIEYILERIAENKQcPPM 309
Cdd:smart00194 151 TGCSetRTVTHYHYTNWPDHGVPESPESILDLIRAVRksqsTSTGPIVVHCSAGVGRTGTFIAIDILLQQLEAGKE-VDI 229
                          250       260       270
                   ....*....|....*....|....*....|
gi 1972266719  310 PDLVKSLRDQRAYSIQTDMQYLYIHRVMLN 339
Cdd:smart00194 230 FEIVKELRSQRPGMVQTEEQYIFLYRAILE 259
Y_phosphatase pfam00102
Protein-tyrosine phosphatase;
107-339 6.34e-93

Protein-tyrosine phosphatase;


Pssm-ID: 459674 [Multi-domain]  Cd Length: 234  Bit Score: 277.97  E-value: 6.34e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 107 NETKNRYADVPCQDQNIVLVAKPPAPSDYVHANFVGCPMVPdKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIET 186
Cdd:pfam00102   1 NLEKNRYKDVLPYDHTRVKLTGDPGPSDYINASYIDGYKKP-KKYIATQGPLPNTVEDFWRMVWEEKVTIIVMLTELEEK 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 187 GKYKCAQYWPLAMGEKKEVkGGIVVENVSGTkpmDRDAEIQITTLQVSFGDQKMS--VRHLHWSDWPDRGVPPCKLTSLE 264
Cdd:pfam00102  80 GREKCAQYWPEEEGESLEY-GDFTVTLKKEK---EDEKDYTVRTLEVSNGGSEETrtVKHFHYTGWPDHGVPESPNSLLD 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 265 LLSAVR-----GSRVPIVVHCSAGIGRTGTIVAIEYILERIaENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHRVMLN 339
Cdd:pfam00102 156 LLRKVRkssldGRSGPIVVHCSAGIGRTGTFIAIDIALQQL-EAEGEVDIFQIVKELRSQRPGMVQTLEQYIFLYDAILE 234
PTPc cd00047
catalytic domain of protein tyrosine phosphatases; Protein tyrosine phosphatases (PTP, EC 3.1. ...
135-335 4.72e-70

catalytic domain of protein tyrosine phosphatases; Protein tyrosine phosphatases (PTP, EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr (pTyr) residues, instead of pSer or pThr. This family has a distinctive active site signature motif, HCSAGxGRxG, and are characterized as either transmembrane, receptor-like or non-transmembrane (soluble) PTPs. Receptor-like PTP domains tend to occur in two copies in the cytoplasmic region of the transmembrane proteins, only one copy may be active.


Pssm-ID: 350343 [Multi-domain]  Cd Length: 200  Bit Score: 218.31  E-value: 4.72e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 135 YVHANFVGCPMVPdKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLAMGEKKEvKGGIVVENV 214
Cdd:cd00047     1 YINASYIDGYRGP-KEYIATQGPLPNTVEDFWRMVWEQKVSVIVMLTNLVEKGREKCERYWPEEGGKPLE-YGDITVTLV 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 215 SgtkpMDRDAEIQITTLQVSFGDQKMS--VRHLHWSDWPDRGVPPCKLTSLELLSAVRGSRV----PIVVHCSAGIGRTG 288
Cdd:cd00047    79 S----EEELSDYTIRTLELSPKGCSESreVTHLHYTGWPDHGVPSSPEDLLALVRRVRKEARkpngPIVVHCSAGVGRTG 154
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1972266719 289 TIVAIEYILERIaENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHR 335
Cdd:cd00047   155 TFIAIDILLERL-EAEGEVDVFEIVKALRKQRPGMVQTLEQYEFIYE 200
PTPc-N9 cd14543
catalytic domain of tyrosine-protein phosphatase non-receptor type 9; Tyrosine-protein ...
107-334 1.03e-60

catalytic domain of tyrosine-protein phosphatase non-receptor type 9; Tyrosine-protein phosphatase non-receptor type 9 (PTPN9), also called protein-tyrosine phosphatase MEG2, belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPN9 plays an important role in promoting intracellular secretary vesicle fusion in hematopoietic cells and promotes the dephosphorylation of ErbB2 and EGFR in breast cancer cells, leading to impaired activation of STAT5 and STAT3. It also directly dephosphorylates STAT3 at the Tyr705 residue, resulting in its inactivation. PTPN9 has been found to be dysregulated in various human cancers, including breast, colorectal, and gastric cancer.


Pssm-ID: 350391 [Multi-domain]  Cd Length: 271  Bit Score: 196.82  E-value: 1.03e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 107 NETKNRYADVPCQDQNIVLVAKP--PAPSDYVHANFVgcpmvpD-----KRFICTQGPLDHTVDDFWWMIVQQKVEQIVM 179
Cdd:cd14543    29 NQEKNRYGDVLCLDQSRVKLPKRngDERTDYINANFM------DgykqkNAYIATQGPLPKTYSDFWRMVWEQKVLVIVM 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 180 LCKTIETGKYKCAQYWPLAmGEKKEVKGGIVVENVSgtkpMDRDAEIQITTLQV--SFGDQKMSVRHLHWSDWPDRGVPP 257
Cdd:cd14543   103 TTRVVERGRVKCGQYWPLE-EGSSLRYGDLTVTNLS----VENKEHYKKTTLEIhnTETDESRQVTHFQFTSWPDFGVPS 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 258 CKLTSLELLSAVR----------GSR-------VPIVVHCSAGIGRTGTIVAIEYILERIAENKQCPPMpDLVKSLRDQR 320
Cdd:cd14543   178 SAAALLDFLGEVRqqqalavkamGDRwkghppgPPIVVHCSAGIGRTGTFCTLDICLSQLEDVGTLNVM-QTVRRMRTQR 256
                         250
                  ....*....|....
gi 1972266719 321 AYSIQTDMQYLYIH 334
Cdd:cd14543   257 AFSIQTPDQYYFCY 270
PTP_fungal cd18533
fungal protein tyrosine phosphatases; This subfamily contains Saccharomyces cerevisiae ...
135-334 4.55e-56

fungal protein tyrosine phosphatases; This subfamily contains Saccharomyces cerevisiae protein-tyrosine phosphatases 1 (PTP1) and 2 (PTP2), Schizosaccharomyces pombe PTP1, PTP2, and PTP3, and similar fungal proteins. PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. PTP2, together with PTP3, is the major phosphatase that dephosphorylates and inactivates the MAP kinase HOG1 and also modulates its subcellular localization.


Pssm-ID: 350509 [Multi-domain]  Cd Length: 212  Bit Score: 182.45  E-value: 4.55e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 135 YVHANFVGCPMVPDKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPlaMGEKKEVKGGIVVENV 214
Cdd:cd18533     1 YINASYITLPGTSSKRYIATQGPLPATIGDFWKMIWQNNVGVIVMLTPLVENGREKCDQYWP--SGEYEGEYGDLTVELV 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 215 SGTKpmDRDAEIQITTLQVSFGDQKM-SVRHLHWSDWPDRGVPPCKLTSLELLSAVR------GSRVPIVVHCSAGIGRT 287
Cdd:cd18533    79 SEEE--NDDGGFIVREFELSKEDGKVkKVYHIQYKSWPDFGVPDSPEDLLTLIKLKRelndsaSLDPPIIVHCSAGVGRT 156
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1972266719 288 GTIVAIEYI---LERIAENKQCPPMPD-----LVKSLRDQRAYSIQTDMQYLYIH 334
Cdd:cd18533   157 GTFIALDSLldeLKRGLSDSQDLEDSEdpvyeIVNQLRKQRMSMVQTLRQYIFLY 211
R3-PTPc cd14548
catalytic domain of R3 subfamily receptor-type tyrosine-protein phosphatases and similar ...
112-334 3.49e-55

catalytic domain of R3 subfamily receptor-type tyrosine-protein phosphatases and similar proteins; R3 subfamily receptor-type phosphotyrosine phosphatases (RPTP) are characterized by a unique modular composition consisting of multiple extracellular fibronectin type III (FN3) repeats and a single (most RPTP subtypes have two) cytoplasmic catalytic PTP domain. Vertebrate members include receptor-type tyrosine-protein phosphatase-like O (PTPRO), J (PTPRJ), Q (PTPRQ), B (PTPRB), V (PTPRV) and H (PTPRH). They belong to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. Most members are PTPs, except for PTPRQ, which dephosphorylates phosphatidylinositide substrates. PTPRV is characterized only in rodents; its function has been lost in humans. Both vertebrate and invertebrate R3 subfamily RPTPs are involved in the control of a variety of cellular processes, including cell growth, differentiation, mitotic cycle and oncogenic transformation.


Pssm-ID: 350396 [Multi-domain]  Cd Length: 222  Bit Score: 180.63  E-value: 3.49e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 112 RYADVPCQDQNIV-LVAKPPAP-SDYVHANFVGCPMVPdKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKY 189
Cdd:cd14548     1 RYTNILPYDHSRVkLIPINEEEgSDYINANYIPGYNSP-REFIATQGPLPGTKDDFWRMVWEQNSHTIVMLTQCMEKGRV 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 190 KCAQYWPLAmgEKKEVKGGIVVENVSgtkpMDRDAEIQITTLQVSFGDQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAV 269
Cdd:cd14548    80 KCDHYWPFD--QDPVYYGDITVTMLS----ESVLPDWTIREFKLERGDEVRSVRQFHFTAWPDHGVPEAPDSLLRFVRLV 153
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1972266719 270 RGSRV----PIVVHCSAGIGRTGTIVAIEYILERIaENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIH 334
Cdd:cd14548   154 RDYIKqekgPTIVHCSAGVGRTGTFIALDRLLQQI-ESEDYVDIFGIVYDLRKHRPLMVQTEAQYIFLH 221
PTPc-N18 cd14603
catalytic domain of tyrosine-protein phosphatase non-receptor type 18; Tyrosine-protein ...
107-341 4.92e-53

catalytic domain of tyrosine-protein phosphatase non-receptor type 18; Tyrosine-protein phosphatase non-receptor type 18 (PTPN18), also called brain-derived phosphatase, belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPN18 regulates HER2-mediated cellular functions through defining both its phosphorylation and ubiquitination states. The N-terminal catalytic PTP domain of PTPN18 blocks lysosomal routing and delays the degradation of HER2 by dephosphorylation, and its C-terminal PEST domain promotes K48-linked HER2 ubiquitination and its destruction via the proteasome pathway.


Pssm-ID: 350451 [Multi-domain]  Cd Length: 266  Bit Score: 176.55  E-value: 4.92e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 107 NETKNRYADVPCQDQNIVLVA--KPPAPSDYVHANFVGCPmVPDKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTI 184
Cdd:cd14603    30 NVKKNRYKDILPYDQTRVILSllQEEGHSDYINANFIKGV-DGSRAYIATQGPLSHTVLDFWRMIWQYGVKVILMACREI 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 185 ETGKYKCAQYWPLAmgEKKEVKGGIVVENVSGTKPmdrDAEIQITTLQVSFGDQKMSVRHLHWSDWPDRGVPP---CKLT 261
Cdd:cd14603   109 EMGKKKCERYWAQE--QEPLQTGPFTITLVKEKRL---NEEVILRTLKVTFQKESRSVSHFQYMAWPDHGIPDspdCMLA 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 262 SLELLSAVRGS-RVPIVVHCSAGIGRTGTIVAIEYIlERIAENKQCPP---MPDLVKSLRDQRAYSIQTDMQYLYIHRVM 337
Cdd:cd14603   184 MIELARRLQGSgPEPLCVHCSAGCGRTGVICTVDYV-RQLLLTQRIPPdfsIFDVVLEMRKQRPAAVQTEEQYEFLYHTV 262

                  ....
gi 1972266719 338 LNYF 341
Cdd:cd14603   263 AQMF 266
PTPc-N22_18_12 cd14542
catalytic domain of tyrosine-protein phosphatase non-receptor type 22, type 18 and type 12; ...
135-335 5.21e-51

catalytic domain of tyrosine-protein phosphatase non-receptor type 22, type 18 and type 12; Tyrosine-protein phosphatase non-receptor type 22 (PTPN22), type 18 (PTPN18) and type 12 (PTPN12) belong to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPN22 is expressed in hematopoietic cells and it functions as a key regulator of immune homeostasis by inhibiting T-cell receptor signaling through the direct dephosphorylation of Src family kinases (Lck and Fyn), ITAMs of the TCRz/CD3 complex, and other signaling molecules. TPN18 regulates HER2-mediated cellular functions through defining both its phosphorylation and ubiquitination states. PTPN12 is characterized as a tumor suppressor and a pivotal regulator of EGFR/HER2 signaling.


Pssm-ID: 350390 [Multi-domain]  Cd Length: 202  Bit Score: 169.14  E-value: 5.21e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 135 YVHANFVGCPMVPdKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLAMGEKKEVkGGIVVENV 214
Cdd:cd14542     1 YINANFIKGVSGS-KAYIATQGPLPNTVLDFWRMIWEYNVQVIVMACREFEMGKKKCERYWPEEGEEQLQF-GPFKISLE 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 215 SgTKPMDRDaeIQITTLQVSFGDQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAVR---GSR-VPIVVHCSAGIGRTGTI 290
Cdd:cd14542    79 K-EKRVGPD--FLIRTLKVTFQKESRTVYQFHYTAWPDHGVPSSVDPILDLVRLVRdyqGSEdVPICVHCSAGCGRTGTI 155
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1972266719 291 VAIEYI-----LERIAENKQcppMPDLVKSLRDQRAYSIQTDMQYLYIHR 335
Cdd:cd14542   156 CAIDYVwnllkTGKIPEEFS---LFDLVREMRKQRPAMVQTKEQYELVYR 202
PTPc-N11_6 cd14544
catalytic domain of tyrosine-protein phosphatase non-receptor type 11 and type 6; ...
107-340 4.57e-49

catalytic domain of tyrosine-protein phosphatase non-receptor type 11 and type 6; Tyrosine-protein phosphatase non-receptor type 11 (PTPN11) and type 6 (PTPN6) belong to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPN11 and PTPN6, are also called SH2 domain-containing tyrosine phosphatase 2 (SHP2) and 1 (SHP1), respectively. They contain two tandem SH2 domains: a catalytic PTP domain, and a C-terminal tail with regulatory properties. Although structurally similar, they have different localization and different roles in signal transduction. PTPN11/SHP2 is expressed ubiquitously and plays a positive role in cell signaling, leading to cell activation, while PTPN6/SHP1 expression is restricted mainly to hematopoietic and epithelial cells and functions as a negative regulator of signaling events.


Pssm-ID: 350392 [Multi-domain]  Cd Length: 251  Bit Score: 165.71  E-value: 4.57e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 107 NETKNRYAD-VPCQDQNIVLVAKPPAP--SDYVHANFV------GCPMVPDKRFICTQGPLDHTVDDFWWMIVQQKVEQI 177
Cdd:cd14544     1 NKGKNRYKNiLPFDHTRVILKDRDPNVpgSDYINANYIrnenegPTTDENAKTYIATQGCLENTVSDFWSMVWQENSRVI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 178 VMLCKTIETGKYKCAQYWPlAMGEKKEVkGGIVVENVSGTKPMDrdaeIQITTLQVSFGDQKMS---VRHLHWSDWPDRG 254
Cdd:cd14544    81 VMTTKEVERGKNKCVRYWP-DEGMQKQY-GPYRVQNVSEHDTTD----YTLRELQVSKLDQGDPireIWHYQYLSWPDHG 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 255 VPP---CKLTSLELLSAVRGSRV---PIVVHCSAGIGRTGTIVAIEYILERIAENK-QCP-PMPDLVKSLRDQRAYSIQT 326
Cdd:cd14544   155 VPSdpgGVLNFLEDVNQRQESLPhagPIVVHCSAGIGRTGTFIVIDMLLDQIKRKGlDCDiDIQKTIQMVRSQRSGMVQT 234
                         250
                  ....*....|....
gi 1972266719 327 DMQYLYIHRVMLNY 340
Cdd:cd14544   235 EAQYKFIYVAVAQY 248
R-PTPc-LAR-1 cd14553
catalytic domain of LAR family receptor-type tyrosine-protein phosphatases, repeat 1; The LAR ...
106-338 8.14e-48

catalytic domain of LAR family receptor-type tyrosine-protein phosphatases, repeat 1; The LAR (leukocyte common antigen-related) family of receptor-type tyrosine-protein phosphatases (RPTPs) include three vertebrate members: LAR (or PTPRF), R-PTP-delta (or PTPRD), and R-PTP-sigma (or PTPRS). They belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. LAR-RPTPs are synaptic adhesion molecules; they bind to distinct synaptic membrane proteins and are physiologically responsible for mediating presynaptic development by shaping various synaptic adhesion pathways. They play roles in various aspects of neuronal development, including axon guidance, neurite extension, and synapse formation and function. LAR-RPTPs contain an extracellular region with three immunoglobulin-like (Ig) domains and four to eight fibronectin type III (FN3) repeats (determined by alternative splicing), a single transmembrane domain, followed by an intracellular region with a membrane-proximal catalytic PTP domain (repeat 1, also called D1) and a membrane-distal non-catalytic PTP-like domain (repeat 2, also called D2). This model represents the catalytic PTP domain (repeat 1).


Pssm-ID: 350401 [Multi-domain]  Cd Length: 238  Bit Score: 162.18  E-value: 8.14e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 106 INETKNRYADVPCQDQN-IVLVAKPPAP-SDYVHANFVGCPMVPDKrFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKT 183
Cdd:cd14553     2 VNKPKNRYANVIAYDHSrVILQPIEGVPgSDYINANYCDGYRKQNA-YIATQGPLPETFGDFWRMVWEQRSATIVMMTKL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 184 IETGKYKCAQYWPlamGEKKEVKGGIVVeNVSGTKPMdrdAEIQITTLQVSFG--DQKMSVRHLHWSDWPDRGVPPCKLT 261
Cdd:cd14553    81 EERSRVKCDQYWP---TRGTETYGLIQV-TLLDTVEL---ATYTVRTFALHKNgsSEKREVRQFQFTAWPDHGVPEHPTP 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 262 SLELLSAVRGSRV----PIVVHCSAGIGRTGTIVAIEYILERIAENKQCppmpDL---VKSLRDQRAYSIQTDMQYLYIH 334
Cdd:cd14553   154 FLAFLRRVKACNPpdagPIVVHCSAGVGRTGCFIVIDSMLERIKHEKTV----DIyghVTCLRAQRNYMVQTEDQYIFIH 229

                  ....
gi 1972266719 335 RVML 338
Cdd:cd14553   230 DALL 233
PTPc-KIM cd14547
catalytic domain of the kinase interaction motif (KIM) family of protein-tyrosine phosphatases; ...
111-335 2.57e-46

catalytic domain of the kinase interaction motif (KIM) family of protein-tyrosine phosphatases; The kinase interaction motif (KIM) family of protein-tyrosine phosphatases (PTPs) includes tyrosine-protein phosphatases non-receptor type 7 (PTPN7) and non-receptor type 5 (PTPN5), and protein-tyrosine phosphatase receptor type R (PTPRR). PTPN7 is also called hematopoietic protein-tyrosine phosphatase (HePTP) while PTPN5 is also called striatal-enriched protein-tyrosine phosphatase (STEP). They belong to the family of classical tyrosine-specific PTPs (EC 3.1.3.48) that catalyze the dephosphorylation of phosphotyrosine peptides. KIM-PTPs are characterized by the presence of a 16-amino-acid KIM that binds specifically to members of the MAPK (mitogen-activated protein kinase) family. They are highly specific to the MAPKs ERK1/2 (extracellular-signal-regulated kinase 1/2) and p38, over JNK (c-Jun N-terminal kinase); they dephosphorylate these kinases and thereby critically modulate cell proliferation and differentiation.


Pssm-ID: 350395 [Multi-domain]  Cd Length: 224  Bit Score: 157.94  E-value: 2.57e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 111 NRYADV-PCQDQNIVLVAKPPAP-SDYVHANFVGCPMVPDKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIEtGK 188
Cdd:cd14547     1 NRYKTIlPNEHSRVCLPSVDDDPlSSYINANYIRGYDGEEKAYIATQGPLPNTVADFWRMVWQEKTPIIVMITNLTE-AK 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 189 YKCAQYWPLAMGEKkevKGGIVVeNVSGTKPMDrdaEIQITTLQVSFGDQKMSVRHLHWSDWPDRGVPPCKLTSLELLSA 268
Cdd:cd14547    80 EKCAQYWPEEENET---YGDFEV-TVQSVKETD---GYTVRKLTLKYGGEKRYLKHYWYTSWPDHKTPEAAQPLLSLVQE 152
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1972266719 269 VRGSRV------PIVVHCSAGIGRTGTIVAIEYILERIAENKQCPPMpDLVKSLRDQRAYSIQTDMQYLYIHR 335
Cdd:cd14547   153 VEEARQtephrgPIVVHCSAGIGRTGCFIATSIGCQQLREEGVVDVL-GIVCQLRLDRGGMVQTAEQYEFVHR 224
R5-PTPc-1 cd14549
catalytic domain of R5 subfamily receptor-type tyrosine-protein phosphatases, repeat 1; The R5 ...
135-334 1.54e-45

catalytic domain of R5 subfamily receptor-type tyrosine-protein phosphatases, repeat 1; The R5 subfamily of receptor-type phosphotyrosine phosphatases (RPTP) is composed of receptor-type tyrosine-protein phosphatase Z (PTPRZ) and G (PTPRG). They belong to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. They are type 1 integral membrane proteins consisting of an extracellular region with a carbonic anhydrase-like (CAH) and a fibronectin type III (FN3) domains, and an intracellular region with a catalytic PTP domain (repeat 1) proximal to the membrane, and a catalytically inactive PTP-fold domain (repeat 2) distal to the membrane. This model represents the catalytic PTP domain (repeat 1).


Pssm-ID: 350397 [Multi-domain]  Cd Length: 204  Bit Score: 155.20  E-value: 1.54e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 135 YVHANFVGcPMVPDKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLamgEKKEVKGGIVVENV 214
Cdd:cd14549     1 YINANYVD-GYNKARAYIATQGPLPSTFDDFWRMVWEQNSAIIVMITNLVERGRRKCDQYWPK---EGTETYGNIQVTLL 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 215 SgTKPMdrdAEIQITTLQV--------SFGDQKMSVRHLHWSDWPDRGVPPcklTSLELLSAVRGSRV-------PIVVH 279
Cdd:cd14549    77 S-TEVL---ATYTVRTFSLknlklkkvKGRSSERVVYQYHYTQWPDHGVPD---YTLPVLSFVRKSSAanppgagPIVVH 149
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1972266719 280 CSAGIGRTGTIVAIEYILERIAEnKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIH 334
Cdd:cd14549   150 CSAGVGRTGTYIVIDSMLQQIQD-KGTVNVFGFLKHIRTQRNYLVQTEEQYIFIH 203
PTPc-N11 cd14605
catalytic domain of tyrosine-protein phosphatase non-receptor type 11; Tyrosine-protein ...
107-340 2.41e-45

catalytic domain of tyrosine-protein phosphatase non-receptor type 11; Tyrosine-protein phosphatase non-receptor type 11 (PTPN11), also called SH2 domain-containing tyrosine phosphatase 2 (SHP-2 or SHP2), belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPN11 promotes the activation of the RAS/Mitogen-Activated Protein Kinases (MAPK) Extracellular-Regulated Kinases 1/2 (ERK1/2) pathway, a canonical signaling cascade that plays key roles in various cellular processes, including proliferation, survival, differentiation, migration, or metabolism. It also regulates the phosphoinositide 3-kinase (PI3K)/AKT pathway, a fundamental cascade that functions in cell survival, proliferation, migration, morphogenesis, and metabolism. PTPN11 dysregulation is associated with several developmental diseases and malignancies, such as Noonan syndrome and juvenile myelomonocytic leukemia. It contains two tandem SH2 domains, a catalytic PTP domain, and a C-terminal tail with regulatory properties.


Pssm-ID: 350453 [Multi-domain]  Cd Length: 253  Bit Score: 156.33  E-value: 2.41e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 107 NETKNRYADV-PCQDQNIVLV-AKPPAP-SDYVHANFV-------GCPMVPDKRFICTQGPLDHTVDDFWWMIVQQKVEQ 176
Cdd:cd14605     2 NKNKNRYKNIlPFDHTRVVLHdGDPNEPvSDYINANIImpefetkCNNSKPKKSYIATQGCLQNTVNDFWRMVFQENSRV 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 177 IVMLCKTIETGKYKCAQYWPLAMGEKKevKGGIVVENVSGTKPMDRD-AEIQITtlQVSFGDQKMSVRHLHWSDWPDRGV 255
Cdd:cd14605    82 IVMTTKEVERGKSKCVKYWPDEYALKE--YGVMRVRNVKESAAHDYIlRELKLS--KVGQGNTERTVWQYHFRTWPDHGV 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 256 PPCKLTSLELLSAVRGSRV------PIVVHCSAGIGRTGTIVAIEYILERIAENK-QCP-PMPDLVKSLRDQRAYSIQTD 327
Cdd:cd14605   158 PSDPGGVLDFLEEVHHKQEsimdagPVVVHCSAGIGRTGTFIVIDILIDIIREKGvDCDiDVPKTIQMVRSQRSGMVQTE 237
                         250
                  ....*....|...
gi 1972266719 328 MQYLYIHRVMLNY 340
Cdd:cd14605   238 AQYRFIYMAVQHY 250
PTPc-N20_13 cd14538
catalytic domain of tyrosine-protein phosphatase non-receptor type 20 and type 13; ...
135-338 5.27e-45

catalytic domain of tyrosine-protein phosphatase non-receptor type 20 and type 13; Tyrosine-protein phosphatase non-receptor type 20 (PTPN20) and type 13 (PTPN13, also known as PTPL1) belong to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. Human PTPN20 is a widely expressed phosphatase with a dynamic subcellular distribution that is targeted to sites of actin polymerization. Human PTPN13 is an important regulator of tumor aggressiveness.


Pssm-ID: 350386 [Multi-domain]  Cd Length: 207  Bit Score: 153.68  E-value: 5.27e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 135 YVHANFVGCPMVPDK-RFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLAMGEKKEVKGGIVVEN 213
Cdd:cd14538     1 YINASHIRIPVGGDTyHYIACQGPLPNTTGDFWQMVWEQKSEVIAMVTQDVEGGKVKCHRYWPDSLNKPLICGGRLEVSL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 214 VSGTKPMDRDAEIqITTLQVSFGDQKmSVRHLHWSDWPDRGVPpckLTSLELLSAVRGSRV-----PIVVHCSAGIGRTG 288
Cdd:cd14538    81 EKYQSLQDFVIRR-ISLRDKETGEVH-HITHLNFTTWPDHGTP---QSADPLLRFIRYMRRihnsgPIVVHCSAGIGRTG 155
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1972266719 289 TIVAIEYILERIAENKQCPPMpDLVKSLRDQRAYSIQTDMQYLYIHRVML 338
Cdd:cd14538   156 VLITIDVALGLIERDLPFDIQ-DIVKDLREQRQGMIQTKDQYIFCYKACL 204
R-PTPc-G-1 cd17667
catalytic domain of receptor-type tyrosine-protein phosphatase G, repeat 1; Receptor-type ...
80-342 6.78e-45

catalytic domain of receptor-type tyrosine-protein phosphatase G, repeat 1; Receptor-type tyrosine-protein phosphatase G (PTPRG), also called protein-tyrosine phosphatase gamma (R-PTP-gamma), belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRG is an important tumor suppressor gene in multiple human cancers such as lung, ovarian, and breast cancers. It is widely expressed in many tissues, including the central nervous system, where it plays a role during neuroinflammation processes. It can dephosphorylate platelet-derived growth factor receptor beta (PDGFRB) and may play a role in PDGFRB-related infantile myofibromatosis. PTPRG has four splicing isoforms: three transmembrane isoforms, PTPRG-A, B, and C, and one secretory isoform, PTPRG-S, which are expressed in many tissues including the brain. PTPRG is a type 1 integral membrane protein consisting of an extracellular region with a carbonic anhydrase-like (CAH) and a fibronectin type III (FN3) domains, and an intracellular region with a catalytic PTP domain (repeat 1) proximal to the membrane, and a catalytically inactive PTP-fold domain (repeat 2) distal to the membrane. This model represents the catalytic PTP domain (repeat 1).


Pssm-ID: 350505 [Multi-domain]  Cd Length: 274  Bit Score: 155.58  E-value: 6.78e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  80 DEFRQMAKYTrPDMTQNAFNANQSANinETKNRYADVPCQDQNIV----LVAKPPAPSDYVHANFVGCPMVPdKRFICTQ 155
Cdd:cd17667     3 EDFEEVQRCT-ADMNITAEHSNHPDN--KHKNRYINILAYDHSRVklrpLPGKDSKHSDYINANYVDGYNKA-KAYIATQ 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 156 GPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPlamGEKKEVKGGIVVeNVSGTKPMD----RDAEIQITTL 231
Cdd:cd17667    79 GPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWP---TENSEEYGNIIV-TLKSTKIHAcytvRRFSIRNTKV 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 232 Q-VSFGDQK-----MSVRHLHWSDWPDRGVPPCKLTSLELL---SAVRGSRV-PIVVHCSAGIGRTGTIVAIEYILERIa 301
Cdd:cd17667   155 KkGQKGNPKgrqneRTVIQYHYTQWPDMGVPEYALPVLTFVrrsSAARTPEMgPVLVHCSAGVGRTGTYIVIDSMLQQI- 233
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1972266719 302 ENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHRVMLNYFL 342
Cdd:cd17667   234 KDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAIL 274
PTPc-N3_4 cd14541
catalytic domain of tyrosine-protein phosphatase non-receptor type 21 and type 14; ...
134-333 7.62e-45

catalytic domain of tyrosine-protein phosphatase non-receptor type 21 and type 14; Tyrosine-protein phosphatase non-receptor type 3 (PTPN3) and type 4 (PTPN4) belong to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPN3 and PTPN4 are large modular proteins containing an N-terminal FERM domain, a PDZ domain and a C-terminal catalytic PTP domain. PTPN3 interacts with mitogen-activated protein kinase p38gamma and serves as its specific phosphatase. PTPN4 functions in TCR cell signaling, apoptosis, cerebellar synaptic plasticity, and innate immune responses.


Pssm-ID: 350389 [Multi-domain]  Cd Length: 212  Bit Score: 153.64  E-value: 7.62e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 134 DYVHANFV-----GCPMVpdKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPlAMGEKKEVKGG 208
Cdd:cd14541     1 DYINANYVnmeipGSGIV--NRYIAAQGPLPNTCADFWQMVWEQKSTLIVMLTTLVERGRVKCHQYWP-DLGETMQFGNL 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 209 IVVENVSGTKPMDRDAEIQITTLQVSfgdQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAVRGSRV----PIVVHCSAGI 284
Cdd:cd14541    78 QITCVSEEVTPSFAFREFILTNTNTG---EERHITQMQYLAWPDHGVPDDSSDFLDFVKRVRQNRVgmvePTVVHCSAGI 154
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1972266719 285 GRTGTIVAIEYILERIAENKQCPPMpDLVKSLRDQRAYSIQTDMQYLYI 333
Cdd:cd14541   155 GRTGVLITMETAMCLIEANEPVYPL-DIVRTMRDQRAMLIQTPSQYRFV 202
R-PTPc-O cd14614
catalytic domain of receptor-type tyrosine-protein phosphatase O; Receptor-type ...
106-335 9.71e-44

catalytic domain of receptor-type tyrosine-protein phosphatase O; Receptor-type tyrosine-protein phosphatase O (PTPRO or R-PTP-O), also known as glomerular epithelial protein 1 or protein tyrosine phosphatase U2 (PTP-U2), belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRO is a member of the R3 subfamily of receptor-type phosphotyrosine phosphatases (RPTP), characterized by a unique modular composition consisting of multiple extracellular fibronectin type III (FN3) repeats and a single (most RPTP subtypes have two) cytoplasmic catalytic PTP domain. It is essential for sustaining the structure and function of foot processes by regulating tyrosine phosphorylation of podocyte proteins. It has been identified as a synaptic cell adhesion molecule (CAM) that serves as a potent initiator of synapse formation. It is also a tumor suppressor in several types of cancer, such as hepatocellular carcinoma, lung cancer, and breast cancer.


Pssm-ID: 350462 [Multi-domain]  Cd Length: 245  Bit Score: 151.96  E-value: 9.71e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 106 INETKNRYADV-PCQDQNIVLVA-KPPAPSDYVHANFVGCPMVPdKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKT 183
Cdd:cd14614    11 VNRCKNRYTNIlPYDFSRVKLVSmHEEEGSDYINANYIPGYNSP-QEYIATQGPLPETRNDFWKMVLQQKSQIIVMLTQC 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 184 IETGKYKCAQYWPLAmgEKKEVKGGIVVENVSGTKpmdrDAEIQITTLQVSFGDQKMSVRHLHWSDWPDRGVPPCKLTS- 262
Cdd:cd14614    90 NEKRRVKCDHYWPFT--EEPVAYGDITVEMLSEEE----QPDWAIREFRVSYADEVQDVMHFNYTAWPDHGVPTANAAEs 163
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1972266719 263 -LELLSAVRGSRV----PIVVHCSAGIGRTGTIVAIEYILERIAENKQCPPMpDLVKSLRDQRAYSIQTDMQYLYIHR 335
Cdd:cd14614   164 iLQFVQMVRQQAVkskgPMIIHCSAGVGRTGTFIALDRLLQHIRDHEFVDIL-GLVSEMRSYRMSMVQTEEQYIFIHQ 240
PTPc-N12 cd14604
catalytic domain of tyrosine-protein phosphatase non-receptor type 12; Tyrosine-protein ...
62-341 1.11e-43

catalytic domain of tyrosine-protein phosphatase non-receptor type 12; Tyrosine-protein phosphatase non-receptor type 12 (PTPN12), also called PTP-PEST or protein-tyrosine phosphatase G1 (PTPG1), belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPN12 is characterized as a tumor suppressor and a pivotal regulator of EGFR/HER2 signaling. It regulates various physiological processes, including cell migration, immune response, and neuronal activity, by dephosphorylating multiple substrates including HER2, FAK, PYK2, PSTPIP, WASP, p130Cas, paxillin, Shc, catenin, c-Abl, ArgBP2, p190RhoGAP, RhoGDI, cell adhesion kinase beta, and Rho GTPase.


Pssm-ID: 350452 [Multi-domain]  Cd Length: 297  Bit Score: 153.16  E-value: 1.11e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  62 IVEQFVQR--ALDYGVEKLRDEF-------RQMAKYTRPDMTQNAFNANQSANINetKNRYADV-PCQDQNIVLVAK-PP 130
Cdd:cd14604     5 ILKKFIERvqAMKSTDHNGEDNFasdfmrlRRLSTKYRTEKIYPTATGEKEENVK--KNRYKDIlPFDHSRVKLTLKtSS 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 131 APSDYVHANFVGCPMVPdKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLaMGEKKEVKGGIV 210
Cdd:cd14604    83 QDSDYINANFIKGVYGP-KAYIATQGPLANTVIDFWRMIWEYNVAIIVMACREFEMGRKKCERYWPL-YGEEPMTFGPFR 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 211 VENVSGTKPMDrdaeIQITTLQVSFGDQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAVRGSR----VPIVVHCSAGIGR 286
Cdd:cd14604   161 ISCEAEQARTD----YFIRTLLLEFQNETRRLYQFHYVNWPDHDVPSSFDSILDMISLMRKYQehedVPICIHCSAGCGR 236
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1972266719 287 TGTIVAIEYILERIAENKqcppMPD------LVKSLRDQRAYSIQTDMQYLYIHRVMLNYF 341
Cdd:cd14604   237 TGAICAIDYTWNLLKAGK----IPEefnvfnLIQEMRTQRHSAVQTKEQYELVHRAIAQLF 293
PTPc_plant_PTP1 cd17658
protein tyrosine phosphatase 1 from Arabidopsis thaliana and similar plant PTPs; Arabidopsis ...
135-334 4.74e-43

protein tyrosine phosphatase 1 from Arabidopsis thaliana and similar plant PTPs; Arabidopsis thaliana protein tyrosine phosphatase 1 (AtPTP1) belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. AtPTP1 dephosphorylates and inhibits MAP kinase 6 (MPK6) in non-oxidative stress conditions. Together with MAP kinase phosphatase 1 (MKP1) it expresses salicylic acid (SA) and camalexin biosynthesis, and therefore, modulating defense response.


Pssm-ID: 350496 [Multi-domain]  Cd Length: 206  Bit Score: 148.77  E-value: 4.74e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 135 YVHANFVGCPMVPD-KRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKY-KCAQYWPLAMGEKKEVkGGIVVE 212
Cdd:cd17658     1 YINASLVETPASESlPKFIATQGPLPHTFEDFWEMVIQQRCPVIIMLTRLVDNYSTaKCADYFPAEENESREF-GRISVT 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 213 N----VSGTKPMDRDAEIQittlQVSFGDQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAVRG---SRVPIVVHCSAGIG 285
Cdd:cd17658    80 NkklkHSQHSITLRVLEVQ----YIESEEPPLSVLHIQYPEWPDHGVPKDTRSVRELLKRLYGippSAGPIVVHCSAGIG 155
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1972266719 286 RTGTIVAIEYILERIAE-NKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIH 334
Cdd:cd17658   156 RTGAYCTIHNTIRRILEgDMSAVDLSKTVRKFRSQRIGMVQTQDQYIFCY 205
PTPc-N1_2 cd14545
catalytic domain of tyrosine-protein phosphatase non-receptor type 1 and type 2; ...
110-329 1.04e-42

catalytic domain of tyrosine-protein phosphatase non-receptor type 1 and type 2; Tyrosine-protein phosphatase non-receptor type 1 (PTPN1) type 2 (PTPN2) belong to the family of classical tyrosine-specific protein tyrosine phosphatases, (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPN1 (or PTP-1B) is the first PTP to be purified and characterized and is the prototypical intracellular PTP found in a wide variety of human tissues. It dephosphorylates and regulates the activity of a number of receptor tyrosine kinases, including the insulin receptor, the EGF receptor, and the PDGF receptor. PTPN2 (or TCPTP), a tumor suppressor, dephosphorylates and inactivates EGFRs, Src family kinases, Janus-activated kinases (JAKs)-1 and -3, and signal transducer and activators of transcription (STATs)-1, -3 and -5, in a cell type and context-dependent manner.


Pssm-ID: 350393 [Multi-domain]  Cd Length: 231  Bit Score: 148.69  E-value: 1.04e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 110 KNRYADVPCQDQNIVLVAKPPAPSDYVHANFVGCPMVpDKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKY 189
Cdd:cd14545     1 LNRYRDRDPYDHDRSRVKLKQGDNDYINASLVEVEEA-KRSYILTQGPLPNTSGHFWQMVWEQNSKAVIMLNKLMEKGQI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 190 KCAQYWPLAMGEKKEVK-GGIVVENVSgtkpMDRDAEIQITTLQVS--FGDQKMSVRHLHWSDWPDRGVPPCKLTSLELL 266
Cdd:cd14545    80 KCAQYWPQGEGNAMIFEdTGLKVTLLS----EEDKSYYTVRTLELEnlKTQETREVLHFHYTTWPDFGVPESPAAFLNFL 155
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1972266719 267 SAVRGSRV------PIVVHCSAGIGRTGTIVAIEYILERIAENKqcPPMPDLVKSLRDQRAYS---IQTDMQ 329
Cdd:cd14545   156 QKVRESGSlssdvgPPVVHCSAGIGRSGTFCLVDTCLVLIEKGN--PSSVDVKKVLLEMRKYRmglIQTPDQ 225
PTPc-N3 cd14600
catalytic domain of tyrosine-protein phosphatase non-receptor type 3; Tyrosine-protein ...
100-343 1.07e-42

catalytic domain of tyrosine-protein phosphatase non-receptor type 3; Tyrosine-protein phosphatase non-receptor type 3 (PTPN3), also called protein-tyrosine phosphatase H1 (PTP-H1), belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPN3 interacts with mitogen-activated protein kinase p38gamma and serves as its specific phosphatase. PTPN3 and p38gamma cooperate to promote Ras-induced oncogenesis. PTPN3 is a large modular protein containing an N-terminal FERM domain, a PDZ domain and a C-terminal catalytic PTP domain. Its PDZ domain binds with the PDZ-binding motif of p38gamma and enables efficient tyrosine dephosphorylation.


Pssm-ID: 350448 [Multi-domain]  Cd Length: 274  Bit Score: 150.00  E-value: 1.07e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 100 ANQSANINetKNRYADVPCQDQNIVLVAkppAPSDYVHANFV-----GCPMVpdKRFICTQGPLDHTVDDFWWMIVQQKV 174
Cdd:cd14600    35 AKLPQNMD--KNRYKDVLPYDATRVVLQ---GNEDYINASYVnmeipSANIV--NKYIATQGPLPHTCAQFWQVVWEQKL 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 175 EQIVMLCKTIETGKYKCAQYWPlamgEKKEVK--GGIVVENVS---GTKPMDRdaEIQITTLQVsfGDQKmSVRHLHWSD 249
Cdd:cd14600   108 SLIVMLTTLTERGRTKCHQYWP----DPPDVMeyGGFRVQCHSedcTIAYVFR--EMLLTNTQT--GEER-TVTHLQYVA 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 250 WPDRGVPPCKLTSLELLSAVRGSRV---PIVVHCSAGIGRTGTIVAIEYILERIAENKQCPPMpDLVKSLRDQRAYSIQT 326
Cdd:cd14600   179 WPDHGVPDDSSDFLEFVNYVRSKRVenePVLVHCSAGIGRTGVLVTMETAMCLTERNQPVYPL-DIVRKMRDQRAMMVQT 257
                         250
                  ....*....|....*..
gi 1972266719 327 DMQYLYIHRVMLNYFLE 343
Cdd:cd14600   258 SSQYKFVCEAILRVYEE 274
PTPc-N6 cd14606
catalytic domain of tyrosine-protein phosphatase non-receptor type 6; Tyrosine-protein ...
107-340 1.25e-42

catalytic domain of tyrosine-protein phosphatase non-receptor type 6; Tyrosine-protein phosphatase non-receptor type 6 (PTPN6), also called SH2 domain-containing protein-tyrosine phosphatase 1 (SHP1 or SHP-1), belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPN6 expression is restricted mainly to hematopoietic and epithelial cells. It is an important regulator of hematopoietic cells, downregulating pathways that promote cell growth, survival, adhesion, and activation. It regulates glucose homeostasis by modulating insulin signalling in the liver and muscle, and it also negatively regulates bone resorption, affecting both the formation and the function of osteoclasts. PTPN6 contains two tandem SH2 domains, a catalytic PTP domain, and a C-terminal tail with regulatory properties.


Pssm-ID: 350454 [Multi-domain]  Cd Length: 266  Bit Score: 149.65  E-value: 1.25e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 107 NETKNRYADVPCQDQNIVLV--AKPPAP-SDYVHANFVG----CPMVPDKRFICTQGPLDHTVDDFWWMIVQQKVEQIVM 179
Cdd:cd14606    18 NKSKNRYKNILPFDHSRVILqgRDSNIPgSDYINANYVKnqllGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVM 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 180 LCKTIETGKYKCAQYWPLAMGEKKevKGGIVVENVSgtkpmDRDA-EIQITTLQVSFGDQKMSVR---HLHWSDWPDRGV 255
Cdd:cd14606    98 TTREVEKGRNKCVPYWPEVGMQRA--YGPYSVTNCG-----EHDTtEYKLRTLQVSPLDNGELIReiwHYQYLSWPDHGV 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 256 PPCKLTSLELLSAVRG------SRVPIVVHCSAGIGRTGTIVAIEYILERIaENKQCPPMPDLVKSL---RDQRAYSIQT 326
Cdd:cd14606   171 PSEPGGVLSFLDQINQrqeslpHAGPIIVHCSAGIGRTGTIIVIDMLMENI-STKGLDCDIDIQKTIqmvRAQRSGMVQT 249
                         250
                  ....*....|....
gi 1972266719 327 DMQYLYIHRVMLNY 340
Cdd:cd14606   250 EAQYKFIYVAIAQF 263
R-PTPc-F-1 cd14626
catalytic domain of receptor-type tyrosine-protein phosphatase F, repeat 1; Receptor-type ...
75-338 2.10e-42

catalytic domain of receptor-type tyrosine-protein phosphatase F, repeat 1; Receptor-type tyrosine-protein phosphatase F (PTPRF), also known as leukocyte common antigen related (LAR), is the prototypical member of the LAR family of receptor-type tyrosine-protein phosphatases (RPTPs), which belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRF/LAR plays a role for LAR in cadherin complexes where it associates with and dephosphorylates beta-catenin, a pathway which may be critical for cadherin complex stability and cell-cell association. It also regulates focal adhesions through cyclin-dependent kinase-1 and is involved in axon guidance in the developing nervous system. It also functions in regulating insulin signaling. PTPRF contains an extracellular region with three immunoglobulin-like (Ig) domains and four to eight fibronectin type III (FN3) repeats (determined by alternative splicing), a single transmembrane domain, followed by an intracellular region with a membrane-proximal catalytic PTP domain (repeat 1, also called D1) and a membrane-distal non-catalytic PTP-like domain (repeat 2, also called D2). This model represents the catalytic PTP domain (repeat 1).


Pssm-ID: 350474 [Multi-domain]  Cd Length: 276  Bit Score: 149.42  E-value: 2.10e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  75 VEKLR--DEFRQMAKYTRPDMTQNAFNANQSANINETKNRYADVPCQDQN-IVLVAKPPAP-SDYVHANFVGcPMVPDKR 150
Cdd:cd14626     7 IERLKanDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYDHSrVILTSVDGVPgSDYINANYID-GYRKQNA 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 151 FICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLamgEKKEVKGGIVVENVSGTKPMDRdaEIQITT 230
Cdd:cd14626    86 YIATQGPLPETLSDFWRMVWEQRTATIVMMTRLEEKSRVKCDQYWPI---RGTETYGMIQVTLLDTVELATY--SVRTFA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 231 LQVSFGDQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAVRGSRV----PIVVHCSAGIGRTGTIVAIEYILERIAENKQC 306
Cdd:cd14626   161 LYKNGSSEKREVRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPpdagPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTV 240
                         250       260       270
                  ....*....|....*....|....*....|..
gi 1972266719 307 pPMPDLVKSLRDQRAYSIQTDMQYLYIHRVML 338
Cdd:cd14626   241 -DIYGHVTCMRSQRNYMVQTEDQYIFIHEALL 271
R-PTPc-H cd14619
catalytic domain of receptor-type tyrosine-protein phosphatase H; Receptor-type ...
111-340 3.69e-42

catalytic domain of receptor-type tyrosine-protein phosphatase H; Receptor-type tyrosine-protein phosphatase H (PTPRH or R-PTP-H), also known as stomach cancer-associated protein tyrosine phosphatase 1 (SAP-1), belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRH is a member of the R3 subfamily of receptor-type phosphotyrosine phosphatases (RPTP), characterized by a unique modular composition consisting of multiple extracellular fibronectin type III (FN3) repeats and a single (most RPTP subtypes have two) cytoplasmic catalytic PTP domain. It is localized specifically at microvilli of the brush border in gastrointestinal epithelial cells. It plays a role in intestinal immunity by regulating CEACAM20 through tyrosine dephosphorylation. It is also a negative regulator of integrin-mediated signaling and may contribute to contact inhibition of cell growth and motility.


Pssm-ID: 350467 [Multi-domain]  Cd Length: 233  Bit Score: 147.34  E-value: 3.69e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 111 NRYADVPCQDQNIVLVA--KPPAPSDYVHANFVGCPMVPdKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGK 188
Cdd:cd14619     1 NRFRNVLPYDWSRVPLKpiHEEPGSDYINANYMPGYWSS-QEFIATQGPLPQTVGDFWRMIWEQQSSTIVMLTNCMEAGR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 189 YKCAQYWPLamgEKKEVKGGIVVENVSGTKPMDRDAEIQITTLQVSFGDQKmSVRHLHWSDWPDRGVPPCKLTSLELLSA 268
Cdd:cd14619    80 VKCEHYWPL---DYTPCTYGHLRVTVVSEEVMENWTVREFLLKQVEEQKTL-SVRHFHFTAWPDHGVPSSTDTLLAFRRL 155
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1972266719 269 VRG------SRVPIVVHCSAGIGRTGTIVAIEYILERIAENKQCPPMpDLVKSLRDQRAYSIQTDMQYLYIHRVMLNY 340
Cdd:cd14619   156 LRQwldqtmSGGPTVVHCSAGVGRTGTLIALDVLLQQLQSEGLLGPF-SFVQKMRENRPLMVQTESQYVFLHQCILDF 232
R-PTPc-T-1 cd14630
catalytic domain of receptor-type tyrosine-protein phosphatase T, repeat 1; Receptor-type ...
107-338 1.24e-41

catalytic domain of receptor-type tyrosine-protein phosphatase T, repeat 1; Receptor-type tyrosine-protein phosphatase T (PTPRT), also known as receptor-type tyrosine-protein phosphatase rho (RPTP-rho or PTPrho), belongs to the type IIb subfamily of receptor protein tyrosine phosphatases (RPTPs), which belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRT is highly expressed in the nervous system and it plays a critical role in regulation of synaptic formation and neuronal development. It dephosphorylates a specific tyrosine residue in syntaxin-binding protein 1, a key component of synaptic vesicle fusion machinery, and regulates its binding to syntaxin 1. PTPRT has been identified as a potential candidate gene for autism spectrum disorder (ASD) susceptibility. It contains an extracellular region with an Meprin-A5 (neuropilin)-mu (MAM) domain, an immunoglobulin (Ig) domain, and four fibronectin type III (FN3) repeats, a transmembrane domain, and an intracellular segment with a juxtamembrane domain similar to the cytoplasmic domain of classical cadherins and two tandem PTP domains. This model represents the first (repeat 1) PTP domain.


Pssm-ID: 350478 [Multi-domain]  Cd Length: 237  Bit Score: 145.94  E-value: 1.24e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 107 NETKNRYADVPCQDQNIV--LVAKPPAPSDYVHANFVGCPMVPdKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTI 184
Cdd:cd14630     3 NRNKNRYGNIISYDHSRVrlQLLDGDPHSDYINANYIDGYHRP-RHYIATQGPMQETVKDFWRMIWQENSASVVMVTNLV 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 185 ETGKYKCAQYWPlamgEKKEVKGGIVVENVSgTKPMdRDAEIQITTLQVSFGDQKMSVRHLHWSDWPDRGVpPCKLTSle 264
Cdd:cd14630    82 EVGRVKCVRYWP----DDTEVYGDIKVTLIE-TEPL-AEYVIRTFTVQKKGYHEIREIRQFHFTSWPDHGV-PCYATG-- 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 265 LLSAVRGSRV-------PIVVHCSAGIGRTGTIVAIEYILErIAENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHRVM 337
Cdd:cd14630   153 LLGFVRQVKFlnppdagPIVVHCSAGAGRTGCFIAIDIMLD-MAENEGVVDIFNCVRELRAQRVNMVQTEEQYVFVHDAI 231

                  .
gi 1972266719 338 L 338
Cdd:cd14630   232 L 232
R-PTPc-J cd14615
catalytic domain of receptor-type tyrosine-protein phosphatase J; Receptor-type ...
111-339 1.61e-41

catalytic domain of receptor-type tyrosine-protein phosphatase J; Receptor-type tyrosine-protein phosphatase J (PTPRJ or R-PTP-J), also known as receptor-type tyrosine-protein phosphatase eta (R-PTP-eta) or density-enhanced phosphatase 1 (DEP-1) OR CD148, belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRJ is a member of the R3 subfamily of receptor-type phosphotyrosine phosphatases (RPTP), characterized by a unique modular composition consisting of multiple extracellular fibronectin type III (FN3) repeats (eight in PTPRJ) and a single (most RPTP subtypes have two) cytoplasmic catalytic PTP domain. It is expressed in various cell types including epithelial, hematopoietic, and endothelial cells. It plays a role in cell adhesion, migration, proliferation and differentiation. It dephosphorylates or contributes to the dephosphorylation of various substrates including protein kinases such as FLT3, PDGFRB, MET, RET (variant MEN2A), VEGFR-2, LYN, SRC, MAPK1, MAPK3, and EGFR, as well as PIK3R1 and PIK3R2.


Pssm-ID: 350463 [Multi-domain]  Cd Length: 229  Bit Score: 145.34  E-value: 1.61e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 111 NRYADVPCQDQNIVLVAKPPAP-SDYVHANFVGCPMVPdKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKY 189
Cdd:cd14615     1 NRYNNVLPYDISRVKLSVQSHStDDYINANYMPGYNSK-KEFIAAQGPLPNTVKDFWRMVWEKNVYAIVMLTKCVEQGRT 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 190 KCAQYWPlamGEKKEVKGGIVVENVSGTKPMD---RDAEIQ-ITTlqvsfgDQKMSVRHLHWSDWPDRGVPpcklTSLEL 265
Cdd:cd14615    80 KCEEYWP---SKQKKDYGDITVTMTSEIVLPEwtiRDFTVKnAQT------NESRTVRHFHFTSWPDHGVP----ETTDL 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 266 LSAVRG----------SRVPIVVHCSAGIGRTGTIVAIEYILERIaENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHR 335
Cdd:cd14615   147 LINFRHlvreymkqnpPNSPILVHCSAGVGRTGTFIAIDRLIYQI-ENENVVDVYGIVYDLRMHRPLMVQTEDQYVFLNQ 225

                  ....
gi 1972266719 336 VMLN 339
Cdd:cd14615   226 CALD 229
R-PTPc-Q cd14616
catalytic domain of receptor-type tyrosine-protein phosphatase Q; Receptor-type ...
111-335 5.92e-41

catalytic domain of receptor-type tyrosine-protein phosphatase Q; Receptor-type tyrosine-protein phosphatase Q (PTPRQ or R-PTP-Q), also called phosphatidylinositol phosphatase PTPRQ, belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRQ is a member of the R3 subfamily of receptor-type phosphotyrosine phosphatases (RPTP), characterized by a unique modular composition consisting of multiple extracellular fibronectin type III (FN3) repeats (18 in PTPRQ) and a single (most RPTP subtypes have two) cytoplasmic catalytic PTP domain. It displays low tyrosine-protein phosphatase activity; rather, it functions as a phosphatidylinositol phosphatase required for auditory processes. It regulates the levels of phosphatidylinositol 4,5-bisphosphate (PIP2) in the basal region of hair bundles. It can dephosphorylate a broad range of phosphatidylinositol phosphates, including phosphatidylinositol 3,4,5-trisphosphate and most phosphatidylinositol monophosphates and diphosphates.


Pssm-ID: 350464 [Multi-domain]  Cd Length: 224  Bit Score: 143.89  E-value: 5.92e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 111 NRYADV-PCQDQNIVLVAKPPAP-SDYVHANFVGCPMVPDKrFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGK 188
Cdd:cd14616     1 NRFPNIkPYNNNRVKLIADAGVPgSDYINASYISGYLCPNE-FIATQGPLPGTVGDFWRMVWETRAKTIVMLTQCFEKGR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 189 YKCAQYWPlAMGEKKEVKGGIVVENVSgtkpMDRDAEIQITTLQVSFGDQKMSVRHLHWSDWPDRGVPPCKLTSLELLSA 268
Cdd:cd14616    80 IRCHQYWP-EDNKPVTVFGDIVITKLM----EDVQIDWTIRDLKIERHGDYMMVRQCNFTSWPEHGVPESSAPLIHFVKL 154
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1972266719 269 VRGSR----VPIVVHCSAGIGRTGTIVAIEYILERIAENKQCpPMPDLVKSLRDQRAYSIQTDMQYLYIHR 335
Cdd:cd14616   155 VRASRahdnTPMIVHCSAGVGRTGVFIALDHLTQHINDHDFV-DIYGLVAELRSERMCMVQNLAQYIFLHQ 224
PTPc-N13 cd14597
catalytic domain of tyrosine-protein phosphatase non-receptor type 13; Tyrosine-protein ...
107-338 1.15e-40

catalytic domain of tyrosine-protein phosphatase non-receptor type 13; Tyrosine-protein phosphatase non-receptor type 13 (PTPN13, also known as PTPL1) belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. Human PTPN13 is an important regulator of tumor aggressiveness. It regulates breast cancer cell aggressiveness through direct inactivation of Src kinase. In hepatocellular carcinoma, PTPN13 is a tumor suppressor. PTPN13 contains a FERM domain, five PDZ domains, and a C-terminal catalytic PTP domain. With its PDZ domains, PTPN13 has numerous interacting partners that can actively participate in the regulation of its phosphatase activity or can permit direct or indirect recruitment of tyrosine phosphorylated substrates. Its FERM domain is necessary for localization to the membrane.


Pssm-ID: 350445 [Multi-domain]  Cd Length: 234  Bit Score: 143.43  E-value: 1.15e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 107 NETKNRYADVPCQDQNIVLVAkppAPSDYVHANFVGCPmVPDKRF--ICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTI 184
Cdd:cd14597     3 NRKKNRYKNILPYDTTRVPLG---DEGGYINASFIKMP-VGDEEFvyIACQGPLPTTVADFWQMVWEQKSTVIAMMTQEV 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 185 ETGKYKCAQYWPLAMGekkevKGGIVVENVSGTKPMDRDAE---IQITTLQVSFGDQKMSVRHLHWSDWPDRGVPPCKLT 261
Cdd:cd14597    79 EGGKIKCQRYWPEILG-----KTTMVDNRLQLTLVRMQQLKnfvIRVLELEDIQTREVRHITHLNFTAWPDHDTPSQPEQ 153
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1972266719 262 SLELLSAVRG--SRVPIVVHCSAGIGRTGTIVAIEYILERIAENKQCpPMPDLVKSLRDQRAYSIQTDMQYLYIHRVML 338
Cdd:cd14597   154 LLTFISYMRHihKSGPIITHCSAGIGRSGTLICIDVVLGLISKDLDF-DISDIVRTMRLQRHGMVQTEDQYIFCYQVIL 231
R-PTPc-B cd14617
catalytic domain of receptor-type tyrosine-protein phosphatase B; Receptor-type ...
111-335 1.24e-40

catalytic domain of receptor-type tyrosine-protein phosphatase B; Receptor-type tyrosine-protein phosphatase B (PTPRB), also known as receptor-type tyrosine-protein phosphatase beta (R-PTP-beta) or vascular endothelial protein tyrosine phosphatase(VE-PTP), belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRB/VE-PTP is a member of the R3 subfamily of receptor-type phosphotyrosine phosphatases (RPTP), characterized by a unique modular composition consisting of multiple extracellular fibronectin type III (FN3) repeats and a single (most RPTP subtypes have two) cytoplasmic catalytic PTP domain. It is expressed specifically in vascular endothelial cells and it plays an important role in blood vessel remodeling and angiogenesis.


Pssm-ID: 350465 [Multi-domain]  Cd Length: 228  Bit Score: 143.14  E-value: 1.24e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 111 NRYADV-PCQDQNIVLVAKPPAP-SDYVHANFV-GCPMvpDKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETG 187
Cdd:cd14617     1 NRYNNIlPYDSTRVKLSNVDDDPcSDYINASYIpGNNF--RREYIATQGPLPGTKDDFWKMVWEQNVHNIVMVTQCVEKG 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 188 KYKCAQYWPlaMGEKKEVKGGIVVENVS-GTKPmdrdaEIQITTLQVSFGDQ---KMSVRHLHWSDWPDRGVPPCKLTSL 263
Cdd:cd14617    79 RVKCDHYWP--ADQDSLYYGDLIVQMLSeSVLP-----EWTIREFKICSEEQldaPRLVRHFHYTVWPDHGVPETTQSLI 151
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1972266719 264 ELLSAVRG------SRVPIVVHCSAGIGRTGTIVAIEYILERIaENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHR 335
Cdd:cd14617   152 QFVRTVRDyinrtpGSGPTVVHCSAGVGRTGTFIALDRILQQL-DSKDSVDIYGAVHDLRLHRVHMVQTECQYVYLHQ 228
PTPc-N21_14 cd14540
catalytic domain of tyrosine-protein phosphatase non-receptor type 21 and type 14; ...
135-340 1.82e-40

catalytic domain of tyrosine-protein phosphatase non-receptor type 21 and type 14; Tyrosine-protein phosphatase non-receptor type 21 (PTPN21) and type 14 (PTPN14) belong to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. Both PTPN21 and PTPN14 contain an N-terminal FERM domain and a C-terminal catalytic PTP domain, separated by a long intervening sequence.


Pssm-ID: 350388 [Multi-domain]  Cd Length: 219  Bit Score: 142.21  E-value: 1.82e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 135 YVHANFVGCpMVPDK--RFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLAMGEKKEVKGGIVve 212
Cdd:cd14540     1 YINASHITA-TVGGKqrFYIAAQGPLQNTVGDFWQMVWEQGVYLVVMVTAEEEGGREKCFRYWPTLGGEHDALTFGEY-- 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 213 NVSGTKPMDRDAEIqITTLQVS--FGDQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAVRGSRV-------------PIV 277
Cdd:cd14540    78 KVSTKFSVSSGCYT-TTGLRVKhtLSGQSRTVWHLQYTDWPDHGCPEDVSGFLDFLEEINSVRRhtnqdvaghnrnpPTL 156
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1972266719 278 VHCSAGIGRTGTIVAIEYILERIaENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHRVMLNY 340
Cdd:cd14540   157 VHCSAGVGRTGVVILADLMLYCL-DHNEELDIPRVLALLRHQRMLLVQTLAQYKFVYNVLIQY 218
PTPc-N22 cd14602
catalytic domain of tyrosine-protein phosphatase non-receptor type 22; Tyrosine-protein ...
110-341 2.90e-40

catalytic domain of tyrosine-protein phosphatase non-receptor type 22; Tyrosine-protein phosphatase non-receptor type 22 (PTPN22), also called lymphoid phosphatase (LyP), PEST-domain phosphatase (PEP), or hematopoietic cell protein-tyrosine phosphatase 70Z-PEP, belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPN22 is expressed in hematopoietic cells and it functions as a key regulator of immune homeostasis by inhibiting T-cell receptor signaling through the direct dephosphorylation of Src family kinases (Lck and Fyn), ITAMs of the TCRz/CD3 complex, and other signaling molecules. Mutations in the PTPN22 gene are associated with multiple connective tissue and autoimmune diseases including type 1 diabetes mellitus, rheumatoid arthritis, and systemic lupus erythematosus. PTPN22 contains an N-terminal catalytic PTP domain and four proline-rich regions at the C-terminus.


Pssm-ID: 350450 [Multi-domain]  Cd Length: 234  Bit Score: 142.29  E-value: 2.90e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 110 KNRYADVPCQDQNIVLVA--KPPAPSDYVHANFVGCPMVPdKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETG 187
Cdd:cd14602     1 KNRYKDILPYDHSRVELSliTSDEDSDYINANFIKGVYGP-RAYIATQGPLSTTLLDFWRMIWEYSVLIIVMACMEFEMG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 188 KYKCAQYWpLAMGEKKEVKG--GIVVENvsgtkpMDRDAEIQITTLQVSFGDQKMSVRHLHWSDWPDRGVPPCKLTSLEL 265
Cdd:cd14602    80 KKKCERYW-AEPGEMQLEFGpfSVTCEA------EKRKSDYIIRTLKVKFNSETRTIYQFHYKNWPDHDVPSSIDPILEL 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 266 LSAVR----GSRVPIVVHCSAGIGRTGTIVAIEYILERIAEN--KQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHRVMLN 339
Cdd:cd14602   153 IWDVRcyqeDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGiiPENFSVFSLIQEMRTQRPSLVQTKEQYELVYNAVIE 232

                  ..
gi 1972266719 340 YF 341
Cdd:cd14602   233 LF 234
PHA02742 PHA02742
protein tyrosine phosphatase; Provisional
97-340 3.17e-40

protein tyrosine phosphatase; Provisional


Pssm-ID: 165109 [Multi-domain]  Cd Length: 303  Bit Score: 144.37  E-value: 3.17e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  97 AFNANQS-ANINETKNRYADVPCQDQNIVLVAKPPAPSDYVHANFV-GCPMvpDKRFICTQGPLDHTVDDFWWMIVQQKV 174
Cdd:PHA02742   41 AFSCNESlELKNMKKCRYPDAPCFDRNRVILKIEDGGDDFINASYVdGHNA--KGRFICTQAPLEETALDFWQAIFQDQV 118
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 175 EQIVMLCKTIETGKYKCAQYWpLAMGEKKEVKGGIVVEnvsgTKPMDRDAEIQITTLQVSFGDQKMS--VRHLHWSDWPD 252
Cdd:PHA02742  119 RVIVMITKIMEDGKEACYPYW-MPHERGKATHGEFKIK----TKKIKSFRNYAVTNLCLTDTNTGASldIKHFAYEDWPH 193
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 253 RGVPPCKLTSLELLSAVR------------GSRV---PIVVHCSAGIGRTGTIVAIEYILERIAENKQCpPMPDLVKSLR 317
Cdd:PHA02742  194 GGLPRDPNKFLDFVLAVReadlkadvdikgENIVkepPILVHCSAGLDRAGAFCAIDICISKYNERAII-PLLSIVRDLR 272
                         250       260
                  ....*....|....*....|...
gi 1972266719 318 DQRAYSIQTDMQYLYIHRVMLNY 340
Cdd:PHA02742  273 KQRHNCLSLPQQYIFCYFIVLIF 295
R-PTPc-Z-1 cd17668
catalytic domain of receptor-type tyrosine-protein phosphatase Z, repeat 1; Receptor-type ...
135-334 2.16e-39

catalytic domain of receptor-type tyrosine-protein phosphatase Z, repeat 1; Receptor-type tyrosine-protein phosphatase Z (PTPRZ), also called receptor-type tyrosine-protein phosphatase zeta (R-PTP-zeta), belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. Three isoforms are generated by alternative splicing from a single PTPRZ gene: two transmembrane isoforms, PTPRZ-A and PTPRZ-B, and one secretory isoform, PTPRZ-S (also known as phosphacan); all are preferentially expressed in the central nervous system (CNS) as chondroitin sulfate (CS) proteoglycans. PTPRZ isoforms play important roles in maintaining oligodendrocyte precursor cells in an undifferentiated state. PTPRZ is a type 1 integral membrane protein consisting of an extracellular region with a carbonic anhydrase-like (CAH) and a fibronectin type III (FN3) domains, and an intracellular region with a catalytic PTP domain (repeat 1) proximal to the membrane, and a catalytically inactive PTP-fold domain (repeat 2) distal to the membrane. This model represents the catalytic PTP domain (repeat 1).


Pssm-ID: 350506 [Multi-domain]  Cd Length: 209  Bit Score: 139.34  E-value: 2.16e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 135 YVHANFVGCPMVPdKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLAMGEkkEVKGGIVVENV 214
Cdd:cd17668     1 YINANYVDGYNKP-KAYIAAQGPLKSTAEDFWRMIWEHNVEVIVMITNLVEKGRRKCDQYWPADGSE--EYGNFLVTQKS 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 215 SGTKPMDRDAEIQITTLQVSFGDQK-----MSVRHLHWSDWPDRGVPPcklTSLELLSAVRGSRV-------PIVVHCSA 282
Cdd:cd17668    78 VQVLAYYTVRNFTLRNTKIKKGSQKgrpsgRVVTQYHYTQWPDMGVPE---YTLPVLTFVRKASYakrhavgPVVVHCSA 154
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1972266719 283 GIGRTGTIVAIEYILERIAENKQCPPMpDLVKSLRDQRAYSIQTDMQYLYIH 334
Cdd:cd17668   155 GVGRTGTYIVLDSMLQQIQHEGTVNIF-GFLKHIRSQRNYLVQTEEQYVFIH 205
R-PTPc-A-E-2 cd14552
catalytic domain of receptor-type tyrosine-protein phosphatase A and E, repeat 2; ...
135-337 2.36e-39

catalytic domain of receptor-type tyrosine-protein phosphatase A and E, repeat 2; Receptor-type tyrosine-protein phosphatase A (PTPRA) and E (PTPRE) belong to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRA and PTPRE share several functions including regulation of Src family kinases and voltage-gated potassium (Kv) channels. They both contain a small extracellular domain, a transmembrane segment, and an intracellular region containing two tandem catalytic PTP domains. This model represents the second PTP domain (repeat 2).


Pssm-ID: 350400 [Multi-domain]  Cd Length: 202  Bit Score: 138.94  E-value: 2.36e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 135 YVHANFVGCPMVPDKrFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPlamGEKKEVKGGIVVENV 214
Cdd:cd14552     1 YINASFIDGYRQKDA-YIATQGPLDHTVEDFWRMIWEWKSCSIVMLTEIKERSQNKCAQYWP---EDGSVSSGDITVELK 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 215 SGTKPMDrdaeIQITTLQVSFG--DQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAVRGSRV-----PIVVHCSAGIGRT 287
Cdd:cd14552    77 DQTDYED----YTLRDFLVTKGkgGSTRTVRQFHFHGWPEVGIPDNGKGMIDLIAAVQKQQQqsgnhPITVHCSAGAGRT 152
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1972266719 288 GTIVAIEYILERIAENKQCPPMpDLVKSLRDQRAYSIQTDMQYLYIHRVM 337
Cdd:cd14552   153 GTFCALSTVLERVKAEGVLDVF-QVVKSLRLQRPHMVQTLEQYEFCYKVV 201
R-PTPc-E-2 cd14622
catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 2; Receptor-type ...
134-340 4.81e-39

catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 2; Receptor-type tyrosine-protein phosphatase E (PTPRE), also known as receptor-type tyrosine-protein phosphatase epsilon (R-PTP-epsilon), belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. The PTPRE gene contains two distinct promoters that generate the two major isoforms: transmembrane (receptor type RPTPe or PTPeM) and cytoplasmic (cyt-PTPe or PTPeC). Receptor type RPTPe plays a critical role in signaling transduction pathways and phosphoprotein network topology in red blood cells, and may also play a role in osteoclast formation and function. It also negatively regulates PDGFRbeta-mediated signaling pathways that are crucial for the pathogenesis of atherosclerosis. cyt-PTPe acts as a negative regulator of insulin receptor signaling in skeletal muscle. It regulates insulin-induced phosphorylation of proteins downstream of the insulin receptor. Receptor type RPTPe contains a small extracellular region, a single transmembrane segment, and an intracellular region two tandem catalytic PTP domains. This model represents the second PTP domain (repeat 2).


Pssm-ID: 350470 [Multi-domain]  Cd Length: 205  Bit Score: 138.21  E-value: 4.81e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 134 DYVHANFVGCPMVPDkRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPlamGEKKEVKGGIVVEn 213
Cdd:cd14622     1 DYINASFIDGYRQKD-YFIATQGPLAHTVEDFWRMVWEWKCHTIVMLTELQEREQEKCVQYWP---SEGSVTHGEITIE- 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 214 vsgtkpMDRDA---EIQITTLQVSFGDQKMS--VRHLHWSDWPDRGVPPCKLTSLELLSAVRGSRV-----PIVVHCSAG 283
Cdd:cd14622    76 ------IKNDTlleTISIRDFLVTYNQEKQTrlVRQFHFHGWPEIGIPAEGKGMIDLIAAVQKQQQqtgnhPIVVHCSAG 149
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1972266719 284 IGRTGTIVAIEYILERI-AENkqcppMPDL---VKSLRDQRAYSIQTDMQYLYIHRVMLNY 340
Cdd:cd14622   150 AGRTGTFIALSNILERVkAEG-----LLDVfqtVKSLRLQRPHMVQTLEQYEFCYRVVQDF 205
R-PTPc-C-1 cd14557
catalytic domain of receptor-type tyrosine-protein phosphatase C, repeat 1; Receptor-type ...
135-335 6.67e-39

catalytic domain of receptor-type tyrosine-protein phosphatase C, repeat 1; Receptor-type tyrosine-protein phosphatase C (PTPRC), also known as CD45, leukocyte common antigen (LCA) or GP180, belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRC/CD45 is found in all nucleated hematopoietic cells and is an essential regulator of T- and B-cell antigen receptor signaling. It controls immune response, both positively and negatively, by dephosphorylating a number of signaling molecules such as the Src family kinases, the CD3zeta chain of TCY, and ZAP-70 kinase. Mutations in the human PTPRC/CD45 gene are associated with severe combined immunodeficiency (SCID) and multiple sclerosis. PTPRC/CD45 contains an extracellular receptor-like region with fibronectin type III (FN3) repeats, a short transmembrane segment, and a cytoplasmic region comprising of a membrane proximal catalytically active PTP domain (repeat 1 or D1) and a membrane distal catalytically impaired PTP-like domain (repeat 2, or D2). This model represents repeat 1.


Pssm-ID: 350405 [Multi-domain]  Cd Length: 201  Bit Score: 137.65  E-value: 6.67e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 135 YVHANFVGCPMVPdKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPlAMGEKKEVKGGIVVEnV 214
Cdd:cd14557     1 YINASYIDGFKEP-RKYIAAQGPKDETVDDFWRMIWEQKSTVIVMVTRCEEGNRNKCAQYWP-SMEEGSRAFGDVVVK-I 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 215 SGTKPMdrdAEIQITTLQVSFGDQKMSVR---HLHWSDWPDRGVPPCKLTSLELLSAVRGSR----VPIVVHCSAGIGRT 287
Cdd:cd14557    78 NEEKIC---PDYIIRKLNINNKKEKGSGRevtHIQFTSWPDHGVPEDPHLLLKLRRRVNAFNnffsGPIVVHCSAGVGRT 154
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 1972266719 288 GTIVAIEYILERIaENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHR 335
Cdd:cd14557   155 GTYIGIDAMLEGL-EAEGRVDVYGYVVKLRRQRCLMVQVEAQYILIHQ 201
R-PTPc-V cd14618
catalytic domain of receptor-type tyrosine-protein phosphatase V; Receptor-type ...
111-338 1.00e-38

catalytic domain of receptor-type tyrosine-protein phosphatase V; Receptor-type tyrosine-protein phosphatase V (PTPRV or R-PTP-V), also known as embryonic stem cell protein-tyrosine phosphatase (ES cell phosphatase) or osteotesticular protein-tyrosine phosphatase (OST-PTP), belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRV is a member of the R3 subfamily of receptor-type phosphotyrosine phosphatases (RPTP), characterized by a unique modular composition consisting of multiple extracellular fibronectin type III (FN3) repeats and a single (most RPTP subtypes have two) cytoplasmic catalytic PTP domain. In rodents, it may play a role in the maintenance of pluripotency and may function in signaling pathways during bone remodeling. It is the only PTP whose function has been lost between rodent and human. The human OST-PTP gene is a pseudogene.


Pssm-ID: 350466 [Multi-domain]  Cd Length: 230  Bit Score: 138.15  E-value: 1.00e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 111 NRYADV-PCQDQNIVLVAKPPAP-SDYVHANFVGCPMVPdKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGK 188
Cdd:cd14618     1 NRYPHVlPYDHSRVRLSQLGGEPhSDYINANFIPGYTSP-QEFIATQGPLKKTIEDFWRLVWEQQVCNIIMLTVGMENGR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 189 YKCAQYWPlamGEKKEVKGGIVVENVSGTKPMD----RDAEIQITTLQvsfgdQKMSVRHLHWSDWPDRGVPPCKLTSLE 264
Cdd:cd14618    80 VLCDHYWP---SESTPVSYGHITVHLLAQSSEDewtrREFKLWHEDLR-----KERRVKHLHYTAWPDHGIPESTSSLMA 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 265 LLSAVRG------SRVPIVVHCSAGIGRTGTIVAIEYILERIAENKQCPPMpDLVKSLRDQRAYSIQTDMQYLYIHRVML 338
Cdd:cd14618   152 FRELVREhvqatkGKGPTLVHCSAGVGRSGTFIALDRLLRQLKEEKVVDVF-NTVYILRMHRYLMIQTLSQYIFLHSCIL 230
PTPc-N20 cd14596
catalytic domain of tyrosine-protein phosphatase non-receptor type 20; Tyrosine-protein ...
135-338 2.13e-38

catalytic domain of tyrosine-protein phosphatase non-receptor type 20; Tyrosine-protein phosphatase non-receptor type 20 (PTPN20) belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. Human PTPN20 is a widely expressed phosphatase with a dynamic subcellular distribution that is targeted to sites of actin polymerization.


Pssm-ID: 350444 [Multi-domain]  Cd Length: 207  Bit Score: 136.42  E-value: 2.13e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 135 YVHANFVGCPMVPDKRF-ICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLAMGEKKEVKG-GIVVE 212
Cdd:cd14596     1 YINASYITMPVGEEELFyIATQGPLPSTIDDFWQMVWENRSDVIAMMTREVERGKVKCHRYWPETLQEPMELENyQLRLE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 213 NVSgtkpMDRDAEIQITTLQVSFGDQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAVRGSRV--PIVVHCSAGIGRTGTI 290
Cdd:cd14596    81 NYQ----ALQYFIIRIIKLVEKETGENRLIKHLQFTTWPDHGTPQSSDQLVKFICYMRKVHNtgPIVVHCSAGIGRAGVL 156
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 1972266719 291 VAIEYILERIAENKQCPPMpDLVKSLRDQRAYSIQTDMQYLYIHRVML 338
Cdd:cd14596   157 ICVDVLLSLIEKDLSFNIK-DIVREMRQQRYGMIQTKDQYLFCYKVVL 203
R-PTPc-typeIIb-1 cd14555
catalytic domain of type IIb (or R2B) subfamily receptor-type tyrosine-protein phosphatases, ...
135-338 2.86e-38

catalytic domain of type IIb (or R2B) subfamily receptor-type tyrosine-protein phosphatases, repeat 1; The type II (or R2B) subfamily of receptor protein tyrosine phosphatases (RPTPs) include the prototypical member PTPmu (or PTPRM), PCP-2 (or PTPRU), PTPrho (or PTPRT), and PTPkappa (or PTPRK). They belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. Type IIb RPTPs mediate cell-cell adhesion though homophilic interactions; their ligand is an identical molecule on an adjacent cell. No heterophilic interactions between the subfamily members have been observed. They also commonly function as tumor suppressors. They contain an extracellular region with an Meprin-A5 (neuropilin)-mu (MAM) domain, an immunoglobulin (Ig) domain, and four fibronectin type III (FN3) repeats, a transmembrane domain, and an intracellular segment with a juxtamembrane domain similar to the cytoplasmic domain of classical cadherins and two tandem PTP domains. This model represents the first (repeat 1) PTP domain.


Pssm-ID: 350403 [Multi-domain]  Cd Length: 204  Bit Score: 136.20  E-value: 2.86e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 135 YVHANFVGCPMVPdKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPlamgEKKEVKGGIVVENV 214
Cdd:cd14555     1 YINANYIDGYHRP-NHYIATQGPMQETVYDFWRMVWQENSASIVMVTNLVEVGRVKCSRYWP----DDTEVYGDIKVTLV 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 215 SgTKPMdrdAE--IQITTLQVSFGDQKMSVRHLHWSDWPDRGVpPCKLTSleLLSAVRGSRV-------PIVVHCSAGIG 285
Cdd:cd14555    76 E-TEPL---AEyvVRTFALERRGYHEIREVRQFHFTGWPDHGV-PYHATG--LLGFIRRVKAsnppsagPIVVHCSAGAG 148
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1972266719 286 RTGTIVAIEYILErIAENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHRVML 338
Cdd:cd14555   149 RTGCYIVIDIMLD-MAEREGVVDIYNCVKELRSRRVNMVQTEEQYIFIHDAIL 200
R-PTPc-S-1 cd14625
catalytic domain of receptor-type tyrosine-protein phosphatase S, repeat 1; Receptor-type ...
77-338 6.64e-38

catalytic domain of receptor-type tyrosine-protein phosphatase S, repeat 1; Receptor-type tyrosine-protein phosphatase S (PTPRS), also known as receptor-type tyrosine-protein phosphatase sigma (R-PTP-sigma), belongs to the LAR (leukocyte common antigen-related) family of receptor-type tyrosine-protein phosphatases (RPTPs), which belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRS is a receptor for glycosaminoglycans, including heparan sulfate proteoglycan and neural chondroitin sulfate proteoglycans (CSPGs), which present a barrier to axon regeneration. It also plays a role in stimulating neurite outgrowth in response to the heparan sulfate proteoglycan GPC2. PTPRS contains an extracellular region with three immunoglobulin-like (Ig) domains and four to eight fibronectin type III (FN3) repeats (determined by alternative splicing), a single transmembrane domain, followed by an intracellular region with a membrane-proximal catalytic PTP domain (repeat 1, also called D1) and a membrane-distal non-catalytic PTP-like domain (repeat 2, also called D2). This model represents the catalytic PTP domain (repeat 1).


Pssm-ID: 350473 [Multi-domain]  Cd Length: 282  Bit Score: 137.53  E-value: 6.64e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  77 KLRDEFRQMAKYTRPDMTQNAFNANQSANINETKNRYADVPCQDQN--IVLVAKPPAPSDYVHANFVGcPMVPDKRFICT 154
Cdd:cd14625    17 KANDNLKLSQEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSrvILQPIEGIMGSDYINANYID-GYRKQNAYIAT 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 155 QGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPlamGEKKEVKGGIVVENVSGTKPMdrDAEIQITTLQVS 234
Cdd:cd14625    96 QGPLPETFGDFWRMVWEQRSATVVMMTKLEEKSRIKCDQYWP---SRGTETYGMIQVTLLDTIELA--TFCVRTFSLHKN 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 235 FGDQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAVRGSRV----PIVVHCSAGIGRTGTIVAIEYILERIAENKQCpPMP 310
Cdd:cd14625   171 GSSEKREVRQFQFTAWPDHGVPEYPTPFLAFLRRVKTCNPpdagPIVVHCSAGVGRTGCFIVIDAMLERIKHEKTV-DIY 249
                         250       260
                  ....*....|....*....|....*...
gi 1972266719 311 DLVKSLRDQRAYSIQTDMQYLYIHRVML 338
Cdd:cd14625   250 GHVTLMRSQRNYMVQTEDQYSFIHDALL 277
PTPc-N4 cd14601
catalytic domain of tyrosine-protein phosphatase non-receptor type 4; Tyrosine-protein ...
134-343 1.40e-37

catalytic domain of tyrosine-protein phosphatase non-receptor type 4; Tyrosine-protein phosphatase non-receptor type 4 (PTPN4), also called protein-tyrosine phosphatase MEG1, belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPN4 functions in TCR cell signaling, apoptosis, cerebellar synaptic plasticity, and innate immune responses. It specifically inhibits the TRIF-dependent TLR4 pathway by suppressing tyrosine phosphorylation of TRAM. It is a large modular protein containing an N-terminal FERM domain, a PDZ domain and a C-terminal catalytic PTP domain; the PDZ domain regulates the catalytic activity of PTPN4.


Pssm-ID: 350449 [Multi-domain]  Cd Length: 212  Bit Score: 134.69  E-value: 1.40e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 134 DYVHANFVGCPmVPDK----RFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLAMGEKKEVKGGI 209
Cdd:cd14601     1 DYINANYINME-IPSSsiinRYIACQGPLPNTCSDFWQMTWEQGSSMVVMLTTQVERGRVKCHQYWPEPSGSSSYGGFQV 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 210 VVENVSGTkPMDRDAEIQITTLQvsfGDQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAVRGSRV----PIVVHCSAGIG 285
Cdd:cd14601    80 TCHSEEGN-PAYVFREMTLTNLE---KNESRPLTQIQYIAWPDHGVPDDSSDFLDFVCLVRNKRAgkdePVVVHCSAGIG 155
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1972266719 286 RTGTIVAIEYILERIAENKQCPPMpDLVKSLRDQRAYSIQTDMQYLYIHRVMLNYFLE 343
Cdd:cd14601   156 RTGVLITMETAMCLIECNQPVYPL-DIVRTMRDQRAMMIQTPSQYRFVCEAILKVYEE 212
R-PTP-LAR-2 cd14554
PTP-like domain of the LAR family receptor-type tyrosine-protein phosphatases, repeat 2; The ...
106-338 1.62e-37

PTP-like domain of the LAR family receptor-type tyrosine-protein phosphatases, repeat 2; The LAR (leukocyte common antigen-related) family of receptor-type tyrosine-protein phosphatases (RPTPs) include three vertebrate members: LAR (or PTPRF), R-PTP-delta (or PTPRD), and R-PTP-sigma (or PTPRS). They belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. LAR-RPTPs are synaptic adhesion molecules; they bind to distinct synaptic membrane proteins and are physiologically responsible for mediating presynaptic development by shaping various synaptic adhesion pathways. They play roles in various aspects of neuronal development, including axon guidance, neurite extension, and synapse formation and function. LAR-RPTPs contain an extracellular region with three immunoglobulin-like (Ig) domains and four to eight fibronectin type III (FN3) repeats (determined by alternative splicing), a single transmembrane domain, followed by an intracellular region with a membrane-proximal catalytic PTP domain (repeat 1, also called D1) and a membrane-distal non-catalytic PTP-like domain (repeat 2, also called D2). This model represents the non-catalytic PTP-like domain (repeat 2).


Pssm-ID: 350402 [Multi-domain]  Cd Length: 238  Bit Score: 135.34  E-value: 1.62e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 106 INETKNRYADVPCQDQNIVLVAKPPAP--SDYVHANFVgcpmvpD-----KRFICTQGPLDHTVDDFWWMIVQQKVEQIV 178
Cdd:cd14554     5 CNKFKNRLVNILPYESTRVCLQPIRGVegSDYINASFI------DgyrqrGAYIATQGPLAETTEDFWRMLWEHNSTIIV 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 179 MLCKTIETGKYKCAQYWPLamgEKKEVKGGIVVENVSG-TKPMDRDAEIQITTLQvsfGDQKMSVRHLHWSDWPDRGVPP 257
Cdd:cd14554    79 MLTKLREMGREKCHQYWPA---ERSARYQYFVVDPMAEyNMPQYILREFKVTDAR---DGQSRTVRQFQFTDWPEQGVPK 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 258 CKLTSLELLSAVR------GSRVPIVVHCSAGIGRTGTIVAIEYILERIaenkQCPPMPDL---VKSLRDQRAYSIQTDM 328
Cdd:cd14554   153 SGEGFIDFIGQVHktkeqfGQEGPITVHCSAGVGRTGVFITLSIVLERM----RYEGVVDVfqtVKLLRTQRPAMVQTED 228
                         250
                  ....*....|
gi 1972266719 329 QYLYIHRVML 338
Cdd:cd14554   229 QYQFCYRAAL 238
PTP-N23 cd14539
PTP-like domain of tyrosine-protein phosphatase non-receptor type 23; Tyrosine-protein ...
135-334 4.01e-37

PTP-like domain of tyrosine-protein phosphatase non-receptor type 23; Tyrosine-protein phosphatase non-receptor type 23 (PTPN23), also called His domain-containing protein tyrosine phosphatase (HD-PTP) or protein tyrosine phosphatase TD14 (PTP-TD14), is a catalytically inactive member of the tyrosine-specific protein tyrosine phosphatase (PTP) family. Human PTPN23 may be involved in the regulation of small nuclear ribonucleoprotein assembly and pre-mRNA splicing by modifying the survival motor neuron (SMN) complex. It plays a role in ciliogenesis and is part of endosomal sorting complex required for transport (ESCRT) pathways. PTPN23 contains five domains: a BRO1-like domain that plays a role in endosomal sorting; a V-domain that interacts with Lys63-linked polyubiquitinated substrates; a central proline-rich region that might recruit SH3-containing proteins; a PTP-like domain; and a proteolytic degradation-targeting motif, also known as a PEST sequence.


Pssm-ID: 350387 [Multi-domain]  Cd Length: 205  Bit Score: 133.28  E-value: 4.01e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 135 YVHANFV-----GCPmvpdkRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLAMGEKKeVKGGI 209
Cdd:cd14539     1 YINASLIedltpYCP-----RFIATQAPLPGTAADFWLMVYEQQVSVIVMLVSEQENEKQKVHRYWPTERGQAL-VYGAI 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 210 VVeNVSGTKPMDRDAE--IQITTLQVSfgdQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAV-------RGSRVPIVVHC 280
Cdd:cd14539    75 TV-SLQSVRTTPTHVEriISIQHKDTR---LSRSVVHLQFTTWPELGLPDSPNPLLRFIEEVhshylqqRSLQTPIVVHC 150
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1972266719 281 SAGIGRTGTIVAIEYILERIAENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIH 334
Cdd:cd14539   151 SSGVGRTGAFCLLYAAVQEIEAGNGIPDLPQLVRKMRQQRKYMLQEKEHLKFCY 204
PTPc-N7 cd14612
catalytic domain of tyrosine-protein phosphatase non-receptor type 7; Tyrosine-protein ...
109-340 5.83e-37

catalytic domain of tyrosine-protein phosphatase non-receptor type 7; Tyrosine-protein phosphatase non-receptor type 7 (PTPN7), also called hematopoietic protein-tyrosine phosphatase (HePTP) or LC-PTP. belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPN7/HePTP is a kinase interaction motif (KIM)-PTP, characterized by the presence of a 16-amino-acid KIM that binds specifically to members of the MAPK (mitogen-activated protein kinase) family. PTPN7/HePTP is found exclusively in the white blood cells in bone marrow, thymus, spleen, lymph nodes and all myeloid and lymphoid cell lines. It negatively regulates T-cell activation and proliferation, and is often dysregulated in the preleukemic disorder myelodysplastic syndrome, as well as in acute myelogenous leukemia.


Pssm-ID: 350460 [Multi-domain]  Cd Length: 247  Bit Score: 134.19  E-value: 5.83e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 109 TKNRYADVPCQDQNIVLVAKPPAP---SDYVHANFVGCPMVPDKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIE 185
Cdd:cd14612    17 SKDRYKTILPNPQSRVCLRRAGSQeeeGSYINANYIRGYDGKEKAYIATQGPMLNTVSDFWEMVWQEECPIIVMITKLKE 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 186 tGKYKCAQYWPlamgEKKEVKGGIVVEnVSGTKPMDrdaEIQITTLQVSFGDQKMSVRHLHWSDWPDRGVPPCKLTSLEL 265
Cdd:cd14612    97 -KKEKCVHYWP----EKEGTYGRFEIR-VQDMKECD---GYTIRDLTIQLEEESRSVKHYWFSSWPDHQTPESAGPLLRL 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 266 LSAVR------GSRVPIVVHCSAGIGRTGTIVAIEYILERIAENKQCPPMpDLVKSLRDQRAYSIQTDMQYLYIHRVMLN 339
Cdd:cd14612   168 VAEVEesrqtaASPGPIVVHCSAGIGRTGCFIATSIGCQQLKDTGKVDIL-GIVCQLRLDRGGMIQTSEQYQFLHHTLAL 246

                  .
gi 1972266719 340 Y 340
Cdd:cd14612   247 Y 247
R-PTPc-D-1 cd14624
catalytic domain of receptor-type tyrosine-protein phosphatase D, repeat 1; Receptor-type ...
75-338 5.84e-37

catalytic domain of receptor-type tyrosine-protein phosphatase D, repeat 1; Receptor-type tyrosine-protein phosphatase D (PTPRD), also known as receptor-type tyrosine-protein phosphatase delta (R-PTP-delta), belongs to the LAR (leukocyte common antigen-related) family of receptor-type tyrosine-protein phosphatases (RPTPs), which belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. LAR-RPTPs are synaptic adhesion molecules that play roles in various aspects of neuronal development, including axon guidance, neurite extension, and synapse formation and function. PTPRD is involved in pre-synaptic differentiation through interaction with SLITRK2. It contains an extracellular region with three immunoglobulin-like (Ig) domains and four to eight fibronectin type III (FN3) repeats (determined by alternative splicing), a single transmembrane domain, followed by an intracellular region with a membrane-proximal catalytic PTP domain (repeat 1, also called D1) and a membrane-distal non-catalytic PTP-like domain (repeat 2, also called D2). This model represents the catalytic PTP domain (repeat 1).


Pssm-ID: 350472 [Multi-domain]  Cd Length: 284  Bit Score: 135.24  E-value: 5.84e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  75 VEKLR--DEFRQMAKYTRPDMTQNAFNANQSANINETKNRYADVPCQDQNIVLVAKPPA--PSDYVHANFVGcPMVPDKR 150
Cdd:cd14624    13 IERLKanDNLKFSQEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVLLSAIEGipGSDYINANYID-GYRKQNA 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 151 FICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLAMGEKKevkgGIVVENVSGTKPMDRDAeIQITT 230
Cdd:cd14624    92 YIATQGALPETFGDFWRMIWEQRSATVVMMTKLEERSRVKCDQYWPSRGTETY----GLIQVTLLDTVELATYC-VRTFA 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 231 LQVSFGDQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAVRGSRV----PIVVHCSAGIGRTGTIVAIEYILERIAENKQC 306
Cdd:cd14624   167 LYKNGSSEKREVRQFQFTAWPDHGVPEHPTPFLAFLRRVKTCNPpdagPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTV 246
                         250       260       270
                  ....*....|....*....|....*....|..
gi 1972266719 307 pPMPDLVKSLRDQRAYSIQTDMQYLYIHRVML 338
Cdd:cd14624   247 -DIYGHVTLMRAQRNYMVQTEDQYIFIHDALL 277
PTPc-N14 cd14599
catalytic domain of tyrosine-protein phosphatase non-receptor type 14; Tyrosine-protein ...
107-343 4.13e-36

catalytic domain of tyrosine-protein phosphatase non-receptor type 14; Tyrosine-protein phosphatase non-receptor type 14 (PTPN14), also called protein-tyrosine phosphatase pez, belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPN14 is a potential tumor suppressor and plays a regulatory role in the Hippo and Wnt/beta-catenin signaling pathways. It contains an N-terminal FERM domain and a C-terminal catalytic PTP domain, separated by a long intervening sequence.


Pssm-ID: 350447 [Multi-domain]  Cd Length: 287  Bit Score: 132.81  E-value: 4.13e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 107 NETKNRYADV-PCQDQNIVLVAKPPAPSDYVHANFVGCPMV-PDKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTI 184
Cdd:cd14599    38 NAERNRIREVvPYEENRVELVPTKENNTGYINASHIKVTVGgEEWHYIATQGPLPHTCHDFWQMVWEQGVNVIAMVTAEE 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 185 ETGKYKCAQYWP-LAMGEKKEVKGGIVVenvsgTKPMDRDAEIQITT-LQVS--FGDQKMSVRHLHWSDWPDRGVPPCK- 259
Cdd:cd14599   118 EGGRSKSHRYWPkLGSKHSSATYGKFKV-----TTKFRTDSGCYATTgLKVKhlLSGQERTVWHLQYTDWPDHGCPEEVq 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 260 --LTSLELLSAVR-----------GSRVPIVVHCSAGIGRTGTIVAIEYILeRIAENKQCPPMPDLVKSLRDQRAYSIQT 326
Cdd:cd14599   193 gfLSYLEEIQSVRrhtnsmldstkNCNPPIVVHCSAGVGRTGVVILTELMI-GCLEHNEKVEVPVMLRHLREQRMFMIQT 271
                         250
                  ....*....|....*..
gi 1972266719 327 DMQYLYIHRVMLnYFLE 343
Cdd:cd14599   272 IAQYKFVYQVLI-QFLK 287
R-PTPc-A-E-1 cd14551
catalytic domain of receptor-type tyrosine-protein phosphatase A and E, repeat 1; ...
135-335 7.51e-36

catalytic domain of receptor-type tyrosine-protein phosphatase A and E, repeat 1; Receptor-type tyrosine-protein phosphatase A (PTPRA) and E (PTPRE) belong to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRA and PTPRE share several functions including regulation of Src family kinases and voltage-gated potassium (Kv) channels. They both contain a small extracellular domain, a transmembrane segment, and an intracellular region containing two tandem catalytic PTP domains. This model represents the first catalytic PTP domain (repeat 1).


Pssm-ID: 350399 [Multi-domain]  Cd Length: 202  Bit Score: 129.65  E-value: 7.51e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 135 YVHANFVGCPMVPDKrFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPlAMGEKkeVKGGIVVENV 214
Cdd:cd14551     1 YINASYIDGYQEKNK-FIAAQGPKDETVNDFWRMIWEQGSATIVMVTNLKERKEKKCSQYWP-DQGCW--TYGNLRVRVE 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 215 SGTKPMD---RDAEIQittlQVSFGDQKMSVR---HLHWSDWPDRGVPPCKLTSLELLSAVRGSRV----PIVVHCSAGI 284
Cdd:cd14551    77 DTVVLVDyttRKFCIQ----KVNRGIGEKRVRlvtQFHFTSWPDFGVPFTPIGMLKFLKKVKSANPpragPIVVHCSAGV 152
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1972266719 285 GRTGTIVAIEYILERI-AENKQcpPMPDLVKSLRDQRAYSIQTDMQYLYIHR 335
Cdd:cd14551   153 GRTGTFIVIDAMLDMMhAEGKV--DVFGFVSRIRQQRSQMVQTDMQYVFIYQ 202
PTPc_DSPc smart00012
Protein tyrosine phosphatase, catalytic domain, undefined specificity; Protein tyrosine ...
241-339 1.01e-35

Protein tyrosine phosphatase, catalytic domain, undefined specificity; Protein tyrosine phosphatases. Homologues detected by this profile and not by those of "PTPc" or "DSPc" are predicted to be protein phosphatases with a similar fold to DSPs and PTPs, yet with unpredicted specificities.


Pssm-ID: 214469 [Multi-domain]  Cd Length: 105  Bit Score: 125.93  E-value: 1.01e-35
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  241 SVRHLHWSDWPDRGVPPCKLTSLELLSAVR------GSRVPIVVHCSAGIGRTGTIVAIEYILERIAENKQCPPMPDLVK 314
Cdd:smart00012   1 TVKHYHYTGWPDHGVPESPDSILELLRAVKknlnqsESSGPVVVHCSAGVGRTGTFVAIDILLQQLEAEAGEVDIFDTVK 80
                           90       100
                   ....*....|....*....|....*
gi 1972266719  315 SLRDQRAYSIQTDMQYLYIHRVMLN 339
Cdd:smart00012  81 ELRSQRPGMVQTEEQYLFLYRALLE 105
PTPc_motif smart00404
Protein tyrosine phosphatase, catalytic domain motif;
241-339 1.01e-35

Protein tyrosine phosphatase, catalytic domain motif;


Pssm-ID: 214649 [Multi-domain]  Cd Length: 105  Bit Score: 125.93  E-value: 1.01e-35
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  241 SVRHLHWSDWPDRGVPPCKLTSLELLSAVR------GSRVPIVVHCSAGIGRTGTIVAIEYILERIAENKQCPPMPDLVK 314
Cdd:smart00404   1 TVKHYHYTGWPDHGVPESPDSILELLRAVKknlnqsESSGPVVVHCSAGVGRTGTFVAIDILLQQLEAEAGEVDIFDTVK 80
                           90       100
                   ....*....|....*....|....*
gi 1972266719  315 SLRDQRAYSIQTDMQYLYIHRVMLN 339
Cdd:smart00404  81 ELRSQRPGMVQTEEQYLFLYRALLE 105
R-PTPc-K-1 cd14631
catalytic domain of receptor-type tyrosine-protein phosphatase K, repeat 1; Receptor-type ...
133-338 2.85e-35

catalytic domain of receptor-type tyrosine-protein phosphatase K, repeat 1; Receptor-type tyrosine-protein phosphatase K (PTPRK), also known as receptor-type tyrosine-protein phosphatase kappa (RPTP-kappa or PTPkappa), belongs to the type IIb subfamily of receptor protein tyrosine phosphatases (RPTPs), which belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRK is widely expressed and has been shown to stimulate cell motility and neurite outgrowth. It is required for anti-proliferative and pro-migratory effects of TGF-beta, suggesting a role in regulation, maintenance, and restoration of cell adhesion. It is a potential tumour suppressor in primary central nervous system lymphomas, colorectal cancer, and breast cancer. It contains an extracellular region with an Meprin-A5 (neuropilin)-mu (MAM) domain, an immunoglobulin (Ig) domain, and four fibronectin type III (FN3) repeats, a transmembrane domain, and an intracellular segment with a juxtamembrane domain similar to the cytoplasmic domain of classical cadherins and two tandem PTP domains. This model represents the first (repeat 1) PTP domain.


Pssm-ID: 350479 [Multi-domain]  Cd Length: 218  Bit Score: 128.60  E-value: 2.85e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 133 SDYVHANFVGCPMVPdKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPlamgEKKEVKGGIVVE 212
Cdd:cd14631    13 SDYINANYIDGYQRP-SHYIATQGPVHETVYDFWRMIWQEQSACIVMVTNLVEVGRVKCYKYWP----DDTEVYGDFKVT 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 213 NVSgTKPMdRDAEIQITTLQVSFGDQKMSVRHLHWSDWPDRGVPpckLTSLELLSAVRGSRV-------PIVVHCSAGIG 285
Cdd:cd14631    88 CVE-MEPL-AEYVVRTFTLERRGYNEIREVKQFHFTGWPDHGVP---YHATGLLSFIRRVKLsnppsagPIVVHCSAGAG 162
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1972266719 286 RTGTIVAIEYILErIAENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHRVML 338
Cdd:cd14631   163 RTGCYIVIDIMLD-MAEREGVVDIYNCVKALRSRRINMVQTEEQYIFIHDAIL 214
PHA02747 PHA02747
protein tyrosine phosphatase; Provisional
78-346 6.74e-35

protein tyrosine phosphatase; Provisional


Pssm-ID: 165114 [Multi-domain]  Cd Length: 312  Bit Score: 130.51  E-value: 6.74e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  78 LRDEFRQMAkyTRPdmtQNAFNANQSANINETKNRYADVPCQDQN-IVLVAKPPAPSDYVHANFVGcPMVPDKRFICTQG 156
Cdd:PHA02747   27 IRDEHHQII--LKP---FDGLIANFEKPENQPKNRYWDIPCWDHNrVILDSGGGSTSDYIHANWID-GFEDDKKFIATQG 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 157 PLDHTVDDFWWMIVQQKVEQIVMLCKTIET-GKYKCAQYWPLAMGEKKEVKgGIVVENVSGT-KPMDRDAEIQITTlQVS 234
Cdd:PHA02747  101 PFAETCADFWKAVWQEHCSIIVMLTPTKGTnGEEKCYQYWCLNEDGNIDME-DFRIETLKTSvRAKYILTLIEITD-KIL 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 235 FGDQKMSvrHLHWSDWPDRGVPPCKLTSLELLSAVRGSR--------------VPIVVHCSAGIGRTGTIVAIEYILERI 300
Cdd:PHA02747  179 KDSRKIS--HFQCSEWFEDETPSDHPDFIKFIKIIDINRkksgklfnpkdallCPIVVHCSDGVGKTGIFCAVDICLNQL 256
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1972266719 301 AENKQCpPMPDLVKSLRDQRAYSIQTDMQYLYIHRV--MLNYFLEKYK 346
Cdd:PHA02747  257 VKRKAI-CLAKTAEKIREQRHAGIMNFDDYLFIQPGyeVLHYFLSKIK 303
PTPc-N2 cd14607
catalytic domain of tyrosine-protein phosphatase non-receptor type 2; Tyrosine-protein ...
107-329 9.22e-35

catalytic domain of tyrosine-protein phosphatase non-receptor type 2; Tyrosine-protein phosphatase non-receptor type 2 (PTPN2), also called T-cell protein-tyrosine phosphatase (TCPTP), belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPN2, a tumor suppressor, dephosphorylates and inactivates EGFRs, Src family kinases, Janus-activated kinases (JAKs)-1 and -3, and signal transducer and activators of transcription (STATs)-1, -3 and -5, in a cell type and context-dependent manner. It is deleted in 6% of all T-cell acute lymphoblastic leukemias and is associated with constitutive JAK1/STAT5 signaling and tumorigenesis.


Pssm-ID: 350455 [Multi-domain]  Cd Length: 257  Bit Score: 128.55  E-value: 9.22e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 107 NETKNRYADVPCQDQNIVLVAKppAPSDYVHANFVGCPMVpDKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIET 186
Cdd:cd14607    24 NRNRNRYRDVSPYDHSRVKLQN--TENDYINASLVVIEEA-QRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEK 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 187 GKYKCAQYWPLAMGEKKEVK-GGIVVENVSgtKPMDRDAEIQITTLQ-VSFGDQKMsVRHLHWSDWPDRGVPPCKLTSLE 264
Cdd:cd14607   101 DSVKCAQYWPTDEEEVLSFKeTGFSVKLLS--EDVKSYYTVHLLQLEnINSGETRT-ISHFHYTTWPDFGVPESPASFLN 177
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1972266719 265 LLSAVRGSRV------PIVVHCSAGIGRTGTIVAIEYILerIAENKQCPPMPDLVKSLRDQRAYS---IQTDMQ 329
Cdd:cd14607   178 FLFKVRESGSlspehgPAVVHCSAGIGRSGTFSLVDTCL--VLMEKKDPDSVDIKQVLLDMRKYRmglIQTPDQ 249
R-PTPc-A-2 cd14623
catalytic domain of receptor-type tyrosine-protein phosphatase A, repeat 2; Receptor-type ...
123-337 5.36e-34

catalytic domain of receptor-type tyrosine-protein phosphatase A, repeat 2; Receptor-type tyrosine-protein phosphatase A (PTPRA), also known as receptor-type tyrosine-protein phosphatase alpha (R-PTP-alpha), belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRA is a positive regulator of Src and Src family kinases via dephosphorylation of the Src-inhibitory tyrosine 527. Thus, it affects transformation and tumorigenesis, inhibition of proliferation, cell cycle arrest, integrin signaling, neuronal differentiation and outgrowth, and ion channel activity. It is also involved in interleukin-1 signaling in fibroblasts through its interaction with the focal adhesion targeting domain of focal adhesion kinase. PTPRA comprises a small extracellular domain, a transmembrane segment, and an intracellular region containing two tandem catalytic PTP domains. This model represents the second PTP domain (repeat 2).


Pssm-ID: 350471 [Multi-domain]  Cd Length: 228  Bit Score: 125.54  E-value: 5.36e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 123 IVLVAKPPAPSDYVHANFVGCPMVPDKrFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPlamGEK 202
Cdd:cd14623    14 IIPVKRGEENTDYVNASFIDGYRQKDS-YIASQGPLQHTIEDFWRMIWEWKSCSIVMLTELEERGQEKCAQYWP---SDG 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 203 KEVKGGIVVEnvsgtkpMDRDAEIQITTLQ-----VSFGDQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAVRGSRV--- 274
Cdd:cd14623    90 SVSYGDITIE-------LKKEEECESYTVRdllvtNTRENKSRQIRQFHFHGWPEVGIPSDGKGMINIIAAVQKQQQqsg 162
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1972266719 275 --PIVVHCSAGIGRTGTIVAIEYILERIaENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHRVM 337
Cdd:cd14623   163 nhPITVHCSAGAGRTGTFCALSTVLERV-KAEGILDVFQTVKSLRLQRPHMVQTLEQYEFCYKVV 226
PHA02738 PHA02738
hypothetical protein; Provisional
95-340 6.12e-34

hypothetical protein; Provisional


Pssm-ID: 222923 [Multi-domain]  Cd Length: 320  Bit Score: 128.12  E-value: 6.12e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  95 QNAFNANQSaniNETKNRYADVPCQDQNIVLVAKPPAPSDYVHANFVGcPMVPDKRFICTQGPLDHTVDDFWWMIVQQKV 174
Cdd:PHA02738   40 DGTFNAEKK---NRKLNRYLDAVCFDHSRVILPAERNRGDYINANYVD-GFEYKKKFICGQAPTRQTCYDFYRMLWMEHV 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 175 EQIVMLCKTIETGKYKCAQYWplamgekKEVKGGIVV--ENVSGTKPMDRDAEIQITTLQVSFGDQKM-SVRHLHWSDWP 251
Cdd:PHA02738  116 QIIVMLCKKKENGREKCFPYW-------SDVEQGSIRfgKFKITTTQVETHPHYVKSTLLLTDGTSATqTVTHFNFTAWP 188
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 252 DRGVPPCKLTSLELLSAVRGSR-----------------VPIVVHCSAGIGRTGTIVAIEYILERIAENKQCpPMPDLVK 314
Cdd:PHA02738  189 DHDVPKNTSEFLNFVLEVRQCQkelaqeslqighnrlqpPPIVVHCNAGLGRTPCYCVVDISISRFDACATV-SIPSIVS 267
                         250       260
                  ....*....|....*....|....*.
gi 1972266719 315 SLRDQRAYSIQTDMQYLYIHRVMLNY 340
Cdd:PHA02738  268 SIRNQRYYSLFIPFQYFFCYRAVKRY 293
PTPc-N1 cd14608
catalytic domain of tyrosine-protein phosphatase non-receptor type 1; Tyrosine-protein ...
107-329 6.64e-34

catalytic domain of tyrosine-protein phosphatase non-receptor type 1; Tyrosine-protein phosphatase non-receptor type 1 (PTPN1), also called protein-tyrosine phosphatase 1B (PTP-1B), belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPN1/PTP-1B is the first PTP to be purified and characterized and is the prototypical intracellular PTP found in a wide variety of human tissues. It contains an N-terminal catalytic PTP domain, followed by two tandem proline-rich motifs that mediate interaction with SH3-domain-containing proteins, and a small hydrophobic stretch that localizes the enzyme to the endoplasmic reticulum (ER). It dephosphorylates and regulates the activity of a number of receptor tyrosine kinases, including the insulin receptor, the EGF receptor, and the PDGF receptor.


Pssm-ID: 350456 [Multi-domain]  Cd Length: 277  Bit Score: 126.68  E-value: 6.64e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 107 NETKNRYADVPCQDQNIVLVAKppAPSDYVHANFVGCPMVpDKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIET 186
Cdd:cd14608    25 NKNRNRYRDVSPFDHSRIKLHQ--EDNDYINASLIKMEEA-QRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEK 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 187 GKYKCAQYWPL-----AMGEKKEVKGGIVVENVSGTKPMdRDAEIQITTLQvsfgdQKMSVRHLHWSDWPDRGVPPCKLT 261
Cdd:cd14608   102 GSLKCAQYWPQkeekeMIFEDTNLKLTLISEDIKSYYTV-RQLELENLTTQ-----ETREILHFHYTTWPDFGVPESPAS 175
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1972266719 262 SLELLSAVRGSRV------PIVVHCSAGIGRTGTIVAIEYILERIAENKQcPPMPDLVKSLRDQRAYS---IQTDMQ 329
Cdd:cd14608   176 FLNFLFKVRESGSlspehgPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD-PSSVDIKKVLLEMRKFRmglIQTADQ 251
R-PTPc-E-1 cd14620
catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 1; Receptor-type ...
132-338 8.79e-34

catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 1; Receptor-type tyrosine-protein phosphatase E (PTPRE), also known as receptor-type tyrosine-protein phosphatase epsilon (R-PTP-epsilon), belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. The PTPRE gene contains two distinct promoters that generate the two major isoforms: transmembrane (receptor type RPTPe or PTPeM) and cytoplasmic (cyt-PTPe or PTPeC). Receptor type RPTPe plays a critical role in signaling transduction pathways and phosphoprotein network topology in red blood cells, and may also play a role in osteoclast formation and function. It also negatively regulates PDGFRbeta-mediated signaling pathways that are crucial for the pathogenesis of atherosclerosis. cyt-PTPe acts as a negative regulator of insulin receptor signaling in skeletal muscle. It regulates insulin-induced phosphorylation of proteins downstream of the insulin receptor. Receptor type RPTPe contains a small extracellular region, a single transmembrane segment, and an intracellular region two tandem catalytic PTP domains. This model represents the first PTP domain (repeat 1).


Pssm-ID: 350468 [Multi-domain]  Cd Length: 229  Bit Score: 125.05  E-value: 8.79e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 132 PSDYVHANFVGCPMVPDKrFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPlamGEKKEVKGGI-- 209
Cdd:cd14620    22 CSDYINASYIDGYKEKNK-FIAAQGPKQETVNDFWRMVWEQKSATIVMLTNLKERKEEKCYQYWP---DQGCWTYGNIrv 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 210 VVENVSgtkpMDRDAEIQITTLQVSFGDQKMSVR---HLHWSDWPDRGVPPCKLTSLELLSAVRGSRV----PIVVHCSA 282
Cdd:cd14620    98 AVEDCV----VLVDYTIRKFCIQPQLPDGCKAPRlvtQLHFTSWPDFGVPFTPIGMLKFLKKVKSVNPvhagPIVVHCSA 173
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1972266719 283 GIGRTGTIVAIEYILERIAENKQCPPMpDLVKSLRDQRAYSIQTDMQYLYIHRVML 338
Cdd:cd14620   174 GVGRTGTFIVIDAMIDMMHAEQKVDVF-EFVSRIRNQRPQMVQTDMQYSFIYQALL 228
R-PTPc-U-1 cd14632
catalytic domain of receptor-type tyrosine-protein phosphatase U, repeat 1; Receptor-type ...
135-338 9.89e-34

catalytic domain of receptor-type tyrosine-protein phosphatase U, repeat 1; Receptor-type tyrosine-protein phosphatase U (PTPRU), also known as pancreatic carcinoma phosphatase 2 (PCP-2), belongs to the type IIb subfamily of receptor protein tyrosine phosphatases (RPTPs), which belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRU/PCP-2 is the most distant member of the type IIb subfamily and may have a distinct biological function other than cell-cell aggregation. It localizes to the adherens junctions and directly binds and dephosphorylates beta-catenin, and regulates the balance between signaling and adhesive beta-catenin. It plays an important role in the maintenance of epithelial integrity. PTPRU contains an extracellular region with an Meprin-A5 (neuropilin)-mu (MAM) domain, an immunoglobulin (Ig) domain, and four fibronectin type III (FN3) repeats, a transmembrane domain, and an intracellular segment with a juxtamembrane domain similar to the cytoplasmic domain of classical cadherins and two tandem PTP domains. This model represents the first (repeat 1) PTP domain.


Pssm-ID: 350480 [Multi-domain]  Cd Length: 205  Bit Score: 124.39  E-value: 9.89e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 135 YVHANFVGcPMVPDKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPlamgEKKEVKGGIVVENV 214
Cdd:cd14632     1 YINANYID-GYHRSNHFIATQGPKQEMVYDFWRMVWQEHCSSIVMITKLVEVGRVKCSKYWP----DDSDTYGDIKITLL 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 215 SgTKPMdrdAEIQITTLQVSFG--DQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAVRGSRV----PIVVHCSAGIGRTG 288
Cdd:cd14632    76 K-TETL---AEYSVRTFALERRgySARHEVKQFHFTSWPEHGVPYHATGLLAFIRRVKASTPpdagPVVVHCSAGAGRTG 151
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1972266719 289 TIVAIEYILErIAENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHRVML 338
Cdd:cd14632   152 CYIVLDVMLD-MAECEGVVDIYNCVKTLCSRRINMIQTEEQYIFIHDAIL 200
R-PTPc-A-1 cd14621
catalytic domain of receptor-type tyrosine-protein phosphatase A, repeat 1; Receptor-type ...
75-342 1.23e-33

catalytic domain of receptor-type tyrosine-protein phosphatase A, repeat 1; Receptor-type tyrosine-protein phosphatase A (PTPRA), also known as receptor-type tyrosine-protein phosphatase alpha (R-PTP-alpha), belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRA is a positive regulator of Src and Src family kinases via dephosphorylation of the Src-inhibitory tyrosine 527. Thus, it affects transformation and tumorigenesis, inhibition of proliferation, cell cycle arrest, integrin signaling, neuronal differentiation and outgrowth, and ion channel activity. It is also involved in interleukin-1 signaling in fibroblasts through its interaction with the focal adhesion targeting domain of focal adhesion kinase. PTPRA comprises a small extracellular domain, a transmembrane segment, and an intracellular region containing two tandem catalytic PTP domains. This model represents the first catalytic PTP domain (repeat 1).


Pssm-ID: 350469 [Multi-domain]  Cd Length: 296  Bit Score: 126.68  E-value: 1.23e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  75 VEKLRDEF-RQMAKYTRpdMTQNAFNANQSANI-----------NETKNRYADV-PCQDQNIVLVAKPPAP-SDYVHANF 140
Cdd:cd14621    10 VDKLEEEInRRMADDNK--LFREEFNALPACPIqatceaaskeeNKEKNRYVNIlPYDHSRVHLTPVEGVPdSDYINASF 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 141 VGCPMVPDKrFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPlamGEKKEVKGGIVVENVSGTKPM 220
Cdd:cd14621    88 INGYQEKNK-FIAAQGPKEETVNDFWRMIWEQNTATIVMVTNLKERKECKCAQYWP---DQGCWTYGNIRVSVEDVTVLV 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 221 D---RDAEIQITTLQVSFGDQKMsVRHLHWSDWPDRGVPPCKLTSLELLSAVRGSRV----PIVVHCSAGIGRTGTIVAI 293
Cdd:cd14621   164 DytvRKFCIQQVGDVTNKKPQRL-ITQFHFTSWPDFGVPFTPIGMLKFLKKVKNCNPqyagAIVVHCSAGVGRTGTFIVI 242
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1972266719 294 EYILERIAENKQCPPMpDLVKSLRDQRAYSIQTDMQYLYIHRVMLNYFL 342
Cdd:cd14621   243 DAMLDMMHAERKVDVY-GFVSRIRAQRCQMVQTDMQYVFIYQALLEHYL 290
R-PTPc-R cd14611
catalytic domain of receptor-type tyrosine-protein phosphatase R; Receptor-type ...
109-334 5.46e-33

catalytic domain of receptor-type tyrosine-protein phosphatase R; Receptor-type tyrosine-protein phosphatase-like R (PTPRR or R-PTP-R), also called protein-tyrosine phosphatase PCPTP1, belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRR is a kinase interaction motif (KIM)-PTP, characterized by the presence of a 16-amino-acid KIM that binds specifically to members of the MAPK (mitogen-activated protein kinase) family. The human and mouse PTPRR gene produces multiple neuronal protein isoforms of varying sizes (in human, PTPPBS-alpha, beta, gamma and delta). All isoforms contain the KIM motif and the catalytic PTP domain. PTPRR-deficient mice show significant defects in fine motor coordination and balance skills that are reminiscent of a mild ataxia.


Pssm-ID: 350459 [Multi-domain]  Cd Length: 226  Bit Score: 122.72  E-value: 5.46e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 109 TKNRYADV-PCQDQNIVLvaKPPAPSD----YVHANFVGCPMVPDKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKT 183
Cdd:cd14611     1 TKNRYKTIlPNPHSRVCL--KPKNSNDslstYINANYIRGYGGKEKAFIATQGPMINTVNDFWQMVWQEDSPVIVMITKL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 184 IETGKyKCAQYWPlamgEKKEVKGGIVVEnVSGTKPMDrdaEIQITTLQVSFGDQKMSVRHLHWSDWPDRGVPPCKLTSL 263
Cdd:cd14611    79 KEKNE-KCVLYWP----EKRGIYGKVEVL-VNSVKECD---NYTIRNLTLKQGSQSRSVKHYWYTSWPDHKTPDSAQPLL 149
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1972266719 264 ELLSAVRGSRV------PIVVHCSAGIGRTGTIVAIEYILERIAENKQCPPMpDLVKSLRDQRAYSIQTDMQYLYIH 334
Cdd:cd14611   150 QLMLDVEEDRLaspgrgPVVVHCSAGIGRTGCFIATTIGCQQLKEEGVVDVL-SIVCQLRVDRGGMVQTSEQYEFVH 225
R-PTP-D-2 cd14628
PTP-like domain of receptor-type tyrosine-protein phosphatase D, repeat 2; Receptor-type ...
63-341 1.14e-32

PTP-like domain of receptor-type tyrosine-protein phosphatase D, repeat 2; Receptor-type tyrosine-protein phosphatase-like D (PTPRD), also known as receptor-type tyrosine-protein phosphatase delta (R-PTP-delta), belongs to the LAR (leukocyte common antigen-related) family of receptor-type tyrosine-protein phosphatases (RPTPs), which belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. LAR-RPTPs are synaptic adhesion molecules that play roles in various aspects of neuronal development, including axon guidance, neurite extension, and synapse formation and function. PTPRD is involved in pre-synaptic differentiation through interaction with SLITRK2. It contains an extracellular region with three immunoglobulin-like (Ig) domains and four to eight fibronectin type III (FN3) repeats (determined by alternative splicing), a single transmembrane domain, followed by an intracellular region with a membrane-proximal catalytic PTP domain (repeat 1, also called D1) and a membrane-distal non-catalytic PTP-like domain (repeat 2, also called D2). This model represents the non-catalytic PTP-like domain (repeat 2). Although described as non-catalytic, this domain contains the catalytic cysteine and the active site signature motif, HCSAGxGRxG.


Pssm-ID: 350476 [Multi-domain]  Cd Length: 292  Bit Score: 123.69  E-value: 1.14e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  63 VEQFVQRALDYGVEKLRDEFRQMAkyTRPDMTQNAFNANQSANinETKNRYADV-PCQDQNIVLVA-KPPAPSDYVHANF 140
Cdd:cd14628    12 IQKLTQIETGENVTGMELEFKRLA--SSKAHTSRFISANLPCN--KFKNRLVNImPYESTRVCLQPiRGVEGSDYINASF 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 141 VGcPMVPDKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPlamGEKKEVKGGIVVENVSG-TKP 219
Cdd:cd14628    88 ID-GYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWP---AERSARYQYFVVDPMAEyNMP 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 220 MDRDAEIQITTLQvsfGDQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAVR------GSRVPIVVHCSAGIGRTGTIVAI 293
Cdd:cd14628   164 QYILREFKVTDAR---DGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHktkeqfGQDGPISVHCSAGVGRTGVFITL 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1972266719 294 EYILERIaENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHRVMLNYF 341
Cdd:cd14628   241 SIVLERM-RYEGVVDIFQTVKMLRTQRPAMVQTEDQYQFCYRAALEYL 287
R-PTPc-M-1 cd14633
catalytic domain of receptor-type tyrosine-protein phosphatase M, repeat 1; Receptor-type ...
107-338 1.73e-32

catalytic domain of receptor-type tyrosine-protein phosphatase M, repeat 1; Receptor-type tyrosine-protein phosphatase M (PTPRM), also known as protein-tyrosine phosphatase mu (R-PTP-mu or PTPmu), belongs to the type IIb subfamily of receptor protein tyrosine phosphatases (RPTPs), which belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRM/PTPmu is a homophilic cell adhesion molecule expressed in CNS neurons and glia. It is required for E-, N-, and R-cadherin-dependent neurite outgrowth. Loss of PTPmu contributes to tumor cell migration and dispersal of human glioblastomas. PTPRM contains an extracellular region with an Meprin-A5 (neuropilin)-mu (MAM) domain, an immunoglobulin (Ig) domain, and four fibronectin type III (FN3) repeats, a transmembrane domain, and an intracellular segment with a juxtamembrane domain similar to the cytoplasmic domain of classical cadherins and two tandem PTP domains. This model represents the first (repeat 1) PTP domain.


Pssm-ID: 350481 [Multi-domain]  Cd Length: 273  Bit Score: 122.84  E-value: 1.73e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 107 NETKNRYADVPCQDQNIVLVA--KPPAPSDYVHANFVGCPMVPDkRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTI 184
Cdd:cd14633    40 NRMKNRYGNIIAYDHSRVRLQpiEGETSSDYINGNYIDGYHRPN-HYIATQGPMQETIYDFWRMVWHENTASIIMVTNLV 118
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 185 ETGKYKCAQYWPLAMGEKKEVKGGIVVENVSgtkpmdrdAEIQITTLQVS--FGDQKMSVRHLHWSDWPDRGVPPCKLTS 262
Cdd:cd14633   119 EVGRVKCCKYWPDDTEIYKDIKVTLIETELL--------AEYVIRTFAVEkrGVHEIREIRQFHFTGWPDHGVPYHATGL 190
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 263 LELLSAVRG----SRVPIVVHCSAGIGRTGTIVAIEYILErIAENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHRVML 338
Cdd:cd14633   191 LGFVRQVKSksppNAGPLVVHCSAGAGRTGCFIVIDIMLD-MAEREGVVDIYNCVRELRSRRVNMVQTEEQYVFIHDAIL 269
R-PTP-F-2 cd14629
PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2; Receptor-type ...
103-341 3.97e-32

PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2; Receptor-type tyrosine-protein phosphatase F (PTPRF), also known as leukocyte common antigen related (LAR), is the prototypical member of the LAR family of receptor-type tyrosine-protein phosphatases (RPTPs), which belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRF/LAR plays a role for LAR in cadherin complexes where it associates with and dephosphorylates beta-catenin, a pathway which may be critical for cadherin complex stability and cell-cell association. It also regulates focal adhesions through cyclin-dependent kinase-1 and is involved in axon guidance in the developing nervous system. It also functions in regulating insulin signaling. PTPRF contains an extracellular region with three immunoglobulin-like (Ig) domains and four to eight fibronectin type III (FN3) repeats (determined by alternative splicing), a single transmembrane domain, followed by an intracellular region with a membrane-proximal catalytic PTP domain (repeat 1, also called D1) and a membrane-distal non-catalytic PTP-like domain (repeat 2, also called D2). This model represents the non-catalytic PTP-like domain (repeat 2). Although described as non-catalytic, this domain contains the catalytic cysteine and the active site signature motif, HCSAGxGRxG.


Pssm-ID: 350477 [Multi-domain]  Cd Length: 291  Bit Score: 122.53  E-value: 3.97e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 103 SANI--NETKNRYADV-PCQDQNIVLVA-KPPAPSDYVHANFVGcPMVPDKRFICTQGPLDHTVDDFWWMIVQQKVEQIV 178
Cdd:cd14629    47 SANLpcNKFKNRLVNImPYELTRVCLQPiRGVEGSDYINASFID-GYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVV 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 179 MLCKTIETGKYKCAQYWPlamGEKKEVKGGIVVENVSG-TKPMDRDAEIQITTLQvsfGDQKMSVRHLHWSDWPDRGVPP 257
Cdd:cd14629   126 MLTKLREMGREKCHQYWP---AERSARYQYFVVDPMAEyNMPQYILREFKVTDAR---DGQSRTIRQFQFTDWPEQGVPK 199
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 258 CKLTSLELLSAVR------GSRVPIVVHCSAGIGRTGTIVAIEYILERIaENKQCPPMPDLVKSLRDQRAYSIQTDMQYL 331
Cdd:cd14629   200 TGEGFIDFIGQVHktkeqfGQDGPITVHCSAGVGRTGVFITLSIVLERM-RYEGVVDMFQTVKTLRTQRPAMVQTEDQYQ 278
                         250
                  ....*....|
gi 1972266719 332 YIHRVMLNYF 341
Cdd:cd14629   279 LCYRAALEYL 288
R-PTP-N-N2 cd14546
PTP-like domain of receptor-type tyrosine-protein phosphatase-like N and N2; Receptor-type ...
135-330 1.65e-31

PTP-like domain of receptor-type tyrosine-protein phosphatase-like N and N2; Receptor-type tyrosine-protein phosphatase-like N (PTPRN) and N2 (PTPRN2) belong to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). They consist of a large ectodomain that contains a RESP18HD (regulated endocrine-specific protein 18 homology domain), followed by a transmembrane segment, and a single, catalytically-impaired, PTP domain. They are mainly expressed in neuropeptidergic neurons and peptide-secreting endocrine cells, including insulin-producing pancreatic beta-cells, and are involved in involved in the generation, cargo storage, traffic, exocytosis and recycling of insulin secretory granules, as well as in beta-cell proliferation. They also are major autoantigens in type 1 diabetes and are involved in the regulation of insulin secretion.


Pssm-ID: 350394 [Multi-domain]  Cd Length: 208  Bit Score: 118.32  E-value: 1.65e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 135 YVHANFVgcpMVPDKR---FICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPlamGEKKEVKGGIVV 211
Cdd:cd14546     1 YINASTI---YDHDPRnpaYIATQGPLPHTIADFWQMIWEQGCVVIVMLTRLQENGVKQCARYWP---EEGSEVYHIYEV 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 212 ENVSGTKPMDrDAEIQITTLQVSFGDQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAV----RGSRVPIVVHCSAGIGRT 287
Cdd:cd14546    75 HLVSEHIWCD-DYLVRSFYLKNLQTSETRTVTQFHFLSWPDEGIPASAKPLLEFRRKVnksyRGRSCPIVVHCSDGAGRT 153
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1972266719 288 GTIVAIEYILERIAENKQCPPMPDLVKSLRDQRAYSIQTDMQY 330
Cdd:cd14546   154 GTYILIDMVLNRMAKGAKEIDIAATLEHLRDQRPGMVKTKDQF 196
R-PTP-S-2 cd14627
PTP-like domain of receptor-type tyrosine-protein phosphatase S, repeat 2; Receptor-type ...
103-341 2.32e-31

PTP-like domain of receptor-type tyrosine-protein phosphatase S, repeat 2; Receptor-type tyrosine-protein phosphatase S (PTPRS), also known as receptor-type tyrosine-protein phosphatase sigma (R-PTP-sigma), belongs to the LAR (leukocyte common antigen-related) family of receptor-type tyrosine-protein phosphatases (RPTPs), which belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRS is a receptor for glycosaminoglycans, including heparan sulfate proteoglycan and neural chondroitin sulfate proteoglycans (CSPGs), which present a barrier to axon regeneration. It also plays a role in stimulating neurite outgrowth in response to the heparan sulfate proteoglycan GPC2. PTPRS contains an extracellular region with three immunoglobulin-like (Ig) domains and four to eight fibronectin type III (FN3) repeats (determined by alternative splicing), a single transmembrane domain, followed by an intracellular region with a membrane-proximal catalytic PTP domain (repeat 1, also called D1) and a membrane-distal non-catalytic PTP-like domain (repeat 2, also called D2). This model represents the non-catalytic PTP-like domain (repeat 2). Although described as non-catalytic, this domain contains the catalytic cysteine and the active site signature motif, HCSAGxGRxG.


Pssm-ID: 350475 [Multi-domain]  Cd Length: 290  Bit Score: 120.22  E-value: 2.32e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 103 SANI--NETKNRYADV-PCQDQNIVLVA-KPPAPSDYVHANFVGcPMVPDKRFICTQGPLDHTVDDFWWMIVQQKVEQIV 178
Cdd:cd14627    47 SANLpcNKFKNRLVNImPYETTRVCLQPiRGVEGSDYINASFID-GYRQQKAYIATQGPLAETTEDFWRMLWENNSTIVV 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 179 MLCKTIETGKYKCAQYWPlamGEKKEVKGGIVVENVSG-TKPMDRDAEIQITTLQvsfGDQKMSVRHLHWSDWPDRGVPP 257
Cdd:cd14627   126 MLTKLREMGREKCHQYWP---AERSARYQYFVVDPMAEyNMPQYILREFKVTDAR---DGQSRTVRQFQFTDWPEQGVPK 199
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 258 CKLTSLELLSAVR------GSRVPIVVHCSAGIGRTGTIVAIEYILERIaENKQCPPMPDLVKSLRDQRAYSIQTDMQYL 331
Cdd:cd14627   200 SGEGFIDFIGQVHktkeqfGQDGPISVHCSAGVGRTGVFITLSIVLERM-RYEGVVDIFQTVKMLRTQRPAMVQTEDEYQ 278
                         250
                  ....*....|
gi 1972266719 332 YIHRVMLNYF 341
Cdd:cd14627   279 FCYQAALEYL 288
R-PTP-C-2 cd14558
PTP-like domain of receptor-type tyrosine-protein phosphatase C, repeat 2; Receptor-type ...
135-332 2.63e-31

PTP-like domain of receptor-type tyrosine-protein phosphatase C, repeat 2; Receptor-type tyrosine-protein phosphatase C (PTPRC), also known as CD45, leukocyte common antigen (LCA) or GP180, belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRC/CD45 is found in all nucleated hematopoietic cells and is an essential regulator of T- and B-cell antigen receptor signaling. It controls immune response, both positively and negatively, by dephosphorylating a number of signaling molecules such as the Src family kinases, the CD3zeta chain of TCY, and ZAP-70 kinase. Mutations in the human PTPRC/CD45 gene are associated with severe combined immunodeficiency (SCID) and multiple sclerosis. PTPRC/CD45 contains an extracellular receptor-like region with fibronectin type III (FN3) repeats, a short transmembrane segment, and a cytoplasmic region comprising of a membrane proximal catalytically active PTP domain (repeat 1 or D1) and a membrane distal catalytically impaired PTP-like domain (repeat 2, or D2). This model represents repeat 2.


Pssm-ID: 350406 [Multi-domain]  Cd Length: 203  Bit Score: 117.49  E-value: 2.63e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 135 YVHANFVG---CPmvpdKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWplamGEKKEVKGGIVV 211
Cdd:cd14558     1 YINASFIDgywGP----KSLIATQGPLPDTIADFWQMIFQKKVKVIVMLTELKEGDQEQCAQYW----GDEKKTYGDIEV 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 212 ENVSGTKPmdRDAEIQITTLQVSFGDQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAVR----------GSRVPIVVHCS 281
Cdd:cd14558    73 ELKDTEKS--PTYTVRVFEITHLKRKDSRTVYQYQYHKWKGEELPEKPKDLVDMIKSIKqklpyknskhGRSVPIVVHCS 150
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1972266719 282 AGIGRTGTIVAIEYILERiAENKQCPPMPDLVKSLRDQRAYSIQTDMQY--LY 332
Cdd:cd14558   151 DGSSRTGIFCALWNLLES-AETEKVVDVFQVVKALRKQRPGMVSTLEQYqfLY 202
COG5599 COG5599
Protein tyrosine phosphatase [Signal transduction mechanisms];
95-330 4.08e-31

Protein tyrosine phosphatase [Signal transduction mechanisms];


Pssm-ID: 444335 [Multi-domain]  Cd Length: 282  Bit Score: 119.43  E-value: 4.08e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  95 QNAFNAN----QSANINETKNRYADVPCQDQNIVlvakpPAPSDYVHANFVgcpMVPDK-RFICTQGPLDHTVDDFWWMI 169
Cdd:COG5599    26 ELAPSHNdpqyLQNINGSPLNRFRDIQPYKETAL-----RANLGYLNANYI---QVIGNhRYIATQYPLEEQLEDFFQML 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 170 VQQKVEQIVML--CKTIETGKYKCAQYWPLAmGEKKEVKggIVVENVSgTKPMDRDAEIQITTLQVSF-GDQKMSVRHLH 246
Cdd:COG5599    98 FDNNTPVLVVLasDDEISKPKVKMPVYFRQD-GEYGKYE--VSSELTE-SIQLRDGIEARTYVLTIKGtGQKKIEIPVLH 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 247 WSDWPD-RGVPPCKLTSL-----ELLSAVRGSRVPIVVHCSAGIGRTGTIVAIEYILERIAENKQCP-PMPDLVKSLRDQ 319
Cdd:COG5599   174 VKNWPDhGAISAEALKNLadlidKKEKIKDPDKLLPVVHCRAGVGRTGTLIACLALSKSINALVQITlSVEEIVIDMRTS 253
                         250
                  ....*....|..
gi 1972266719 320 RAYSI-QTDMQY 330
Cdd:COG5599   254 RNGGMvQTSEQL 265
PHA02746 PHA02746
protein tyrosine phosphatase; Provisional
107-349 5.24e-31

protein tyrosine phosphatase; Provisional


Pssm-ID: 165113 [Multi-domain]  Cd Length: 323  Bit Score: 120.13  E-value: 5.24e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 107 NETKNRYADVPCQDQNIVL---------------------VAKPPAPSDYVHANFVGCPMVPDKrFICTQGPLDHTVDDF 165
Cdd:PHA02746   51 NLKKNRFHDIPCWDHSRVVinaheslkmfdvgdsdgkkieVTSEDNAENYIHANFVDGFKEANK-FICAQGPKEDTSEDF 129
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 166 WWMIVQQKVEQIVMLCKTiETGKYKCAQYWplAMGEKKEVKGGIVVenvsgTKPMDRDAEIQITTLQVSF----GDQKMS 241
Cdd:PHA02746  130 FKLISEHESQVIVSLTDI-DDDDEKCFELW--TKEEDSELAFGRFV-----AKILDIIEELSFTKTRLMItdkiSDTSRE 201
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 242 VRHLHWSDWPDRGVPPCKLTSLELLSAVRGSRV--------------PIVVHCSAGIGRTGTIVAIEYILERIaENKQCP 307
Cdd:PHA02746  202 IHHFWFPDWPDNGIPTGMAEFLELINKVNEEQAelikqadndpqtlgPIVVHCSAGIGRAGTFCAIDNALEQL-EKEKEV 280
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1972266719 308 PMPDLVKSLRDQRAYSIQTDMQYLYIHRVMLNYFLEKYKDKY 349
Cdd:PHA02746  281 CLGEIVLKIRKQRHSSVFLPEQYAFCYKALKYAIIEEAKKKF 322
R-PTP-N cd14609
PTP-like domain of receptor-type tyrosine-protein phosphatase N; Receptor-type ...
76-330 3.21e-30

PTP-like domain of receptor-type tyrosine-protein phosphatase N; Receptor-type tyrosine-protein phosphatase-like N (PTPRN or R-PTP-N), also called islet cell antigen 512 (ICA512) or PTP IA-2, belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). It consists of a large ectodomain that contains a RESP18HD (regulated endocrine-specific protein 18 homology domain), followed by a transmembrane segment, and a single, catalytically-impaired, PTP domain. PTPRN is located in secretory granules of neuroendocrine cells and is involved in the generation, cargo storage, traffic, exocytosis and recycling of insulin secretory granules, as well as in beta-cell proliferation. It is a major autoantigen in type 1 diabetes and is involved in the regulation of insulin secretion.


Pssm-ID: 350457 [Multi-domain]  Cd Length: 281  Bit Score: 117.06  E-value: 3.21e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  76 EKLRDEFRQMAKY-TRPDmtqNAFNANQSANINetKNRYAD-VPCQDQNIVLVAK-PPAPSDYVHANfvgcPMVP-DKR- 150
Cdd:cd14609    15 DRLAKEWQALCAYqAEPN---TCSTAQGEANVK--KNRNPDfVPYDHARIKLKAEsNPSRSDYINAS----PIIEhDPRm 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 151 --FICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWP---LAMGEKKEVKggIVVENVSGTKPMDRDAE 225
Cdd:cd14609    86 paYIATQGPLSHTIADFWQMVWENGCTVIVMLTPLVEDGVKQCDRYWPdegSSLYHIYEVN--LVSEHIWCEDFLVRSFY 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 226 IQITTLQvsfgdQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAV----RGSRVPIVVHCSAGIGRTGTIVAIEYILERIA 301
Cdd:cd14609   164 LKNVQTQ-----ETRTLTQFHFLSWPAEGIPSSTRPLLDFRRKVnkcyRGRSCPIIVHCSDGAGRTGTYILIDMVLNRMA 238
                         250       260
                  ....*....|....*....|....*....
gi 1972266719 302 ENKQCPPMPDLVKSLRDQRAYSIQTDMQY 330
Cdd:cd14609   239 KGVKEIDIAATLEHVRDQRPGMVRTKDQF 267
PTPc-N5 cd14613
catalytic domain of tyrosine-protein phosphatase non-receptor type 5; Tyrosine-protein ...
110-337 1.14e-29

catalytic domain of tyrosine-protein phosphatase non-receptor type 5; Tyrosine-protein phosphatase non-receptor type 5 (PTPN5), also called striatum-enriched protein-tyrosine phosphatase (STEP) or neural-specific PTP, belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPN5/STEP is a kinase interaction motif (KIM)-PTP, characterized by the presence of a 16-amino-acid KIM that binds specifically to members of the MAPK (mitogen-activated protein kinase) family. It is a CNS-enriched protein that regulates key signaling proteins required for synaptic strengthening, as well as NMDA and AMPA receptor trafficking. PTPN5 is implicated in multiple neurologic and neuropsychiatric disorders, such as Alzheimer's disease, Parkinson's disease, schizophrenia, and fragile X syndrome.


Pssm-ID: 350461 [Multi-domain]  Cd Length: 258  Bit Score: 114.96  E-value: 1.14e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 110 KNRYADV-PCQDQNIVLVAKPPAP--SDYVHANFVGCPMVPDKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLcKTIET 186
Cdd:cd14613    28 KNRYKTIlPNPHSRVCLTSPDQDDplSSYINANYIRGYGGEEKVYIATQGPTVNTVGDFWRMVWQERSPIIVMI-TNIEE 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 187 GKYKCAQYWPlamgEKKEVKGGIVVeNVSGTKPMDrDAEIQITTLQVsfGDQKMSVRHLHWSDWPDRGVPPCKLTSLELL 266
Cdd:cd14613   107 MNEKCTEYWP----EEQVTYEGIEI-TVKQVIHAD-DYRLRLITLKS--GGEERGLKHYWYTSWPDQKTPDNAPPLLQLV 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 267 SAVRGSR-------VPIVVHCSAGIGRTGTIVAIEYILERIAENKqcppMPDLVKS---LRDQRAYSIQTDMQYLYIHRV 336
Cdd:cd14613   179 QEVEEARqqaepncGPVIVHCSAGIGRTGCFIATSICCKQLRNEG----VVDILRTtcqLRLDRGGMIQTCEQYQFVHHV 254

                  .
gi 1972266719 337 M 337
Cdd:cd14613   255 L 255
PTPc-N21 cd14598
catalytic domain of tyrosine-protein phosphatase non-receptor type 21; Tyrosine-protein ...
151-341 1.73e-29

catalytic domain of tyrosine-protein phosphatase non-receptor type 21; Tyrosine-protein phosphatase non-receptor type 21 (PTPN21), also called protein-tyrosine phosphatase D1, belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPN21 is a component of a multivalent scaffold complex nucleated by focal adhesion kinase (FAK) at specific intracellular sites. It promotes cytoskeleton events that induce cell adhesion and migration by modulating Src-FAK signaling. It can also selectively associate with and stimulate Tec family kinases and modulate Stat3 activation. Human PTPN21 may also play a pathologic role in gastrointestinal tract tumorigenesis. PTPN21 contains an N-terminal FERM domain and a C-terminal catalytic PTP domain, separated by a long intervening sequence.


Pssm-ID: 350446 [Multi-domain]  Cd Length: 220  Bit Score: 113.53  E-value: 1.73e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 151 FICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLAMGEKKEVKGGivveNVSGTKPMDRDAEIQITT 230
Cdd:cd14598    18 YIATQGPLQNTCQDFWQMVWEQGVAIIAMVTAEEEGGREKSFRYWPRLGSRHNTVTYG----RFKITTRFRTDSGCYATT 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 231 -LQVS--FGDQKMSVRHLHWSDWPDRGVP---PCKLTSLELLSAVR----------GSRVPIVVHCSAGIGRTGTIVAIE 294
Cdd:cd14598    94 gLKIKhlLTGQERTVWHLQYTDWPEHGCPedlKGFLSYLEEIQSVRrhtnstidpkSPNPPVLVHCSAGVGRTGVVILSE 173
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1972266719 295 yILERIAENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHRVMLNYF 341
Cdd:cd14598   174 -IMIACLEHNEMLDIPRVLDMLRQQRMMMVQTLSQYTFVYKVLIQFL 219
R-PTP-N2 cd14610
PTP-like domain of receptor-type tyrosine-protein phosphatase N2; Receptor-type ...
76-330 1.44e-28

PTP-like domain of receptor-type tyrosine-protein phosphatase N2; Receptor-type tyrosine-protein phosphatase N2 (PTPRN2 or R-PTP-N2), also called islet cell autoantigen-related protein (IAR), ICAAR, phogrin, or IA-2beta, belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). It consists of a large ectodomain that contains a RESP18HD (regulated endocrine-specific protein 18 homology domain), followed by a transmembrane segment, and a single, catalytically-impaired, PTP domain. It is mainly expressed in neuropeptidergic neurons and peptide-secreting endocrine cells, including insulin-producing pancreatic beta-cells. It may function as a phosphatidylinositol phosphatase to regulate insulin secretion. It is also required for normal accumulation of the neurotransmitters norepinephrine, dopamine and serotonin in the brain.


Pssm-ID: 350458 [Multi-domain]  Cd Length: 283  Bit Score: 112.46  E-value: 1.44e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  76 EKLRDEFRQMAKY-TRPDMTqnaFNANQSANINetKNRYADVPCQDQNIVLVA--KPPAPSDYVHANFVgcpMVPDKR-- 150
Cdd:cd14610    17 NRLEKEWEALCAYqAEPNAT---NVAQREENVQ--KNRSLAVLPYDHSRIILKaeNSHSHSDYINASPI---MDHDPRnp 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 151 -FICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLAMGEKKEV-KGGIVVENVSGTKPMDRdaEIQI 228
Cdd:cd14610    89 aYIATQGPLPATVADFWQMVWESGCVVIVMLTPLAENGVKQCYHYWPDEGSNLYHIyEVNLVSEHIWCEDFLVR--SFYL 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 229 TTLQVsfgDQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAV----RGSRVPIVVHCSAGIGRTGTIVAIEYILERIAENK 304
Cdd:cd14610   167 KNLQT---NETRTVTQFHFLSWNDQGVPASTRSLLDFRRKVnkcyRGRSCPIIVHCSDGAGRSGTYILIDMVLNKMAKGA 243
                         250       260
                  ....*....|....*....|....*.
gi 1972266719 305 QCPPMPDLVKSLRDQRAYSIQTDMQY 330
Cdd:cd14610   244 KEIDIAATLEHLRDQRPGMVQTKEQF 269
R-PTPc-typeIIb-2 cd14556
PTP domain of type IIb (or R2B) subfamily receptor-type tyrosine-protein phosphatases, repeat ...
151-334 5.64e-26

PTP domain of type IIb (or R2B) subfamily receptor-type tyrosine-protein phosphatases, repeat 2; The type IIb (or R2B) subfamily of receptor protein tyrosine phosphatases (RPTPs) include the prototypical member PTPmu (or PTPRM), PCP-2 (or PTPRU), PTPrho (or PTPRT), and PTPkappa (or PTPRK). They belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. Type IIb RPTPs mediate cell-cell adhesion though homophilic interactions; their ligand is an identical molecule on an adjacent cell. No heterophilic interactions between the subfamily members have been observed. They also commonly function as tumor suppressors. They contain an extracellular region with an Meprin-A5 (neuropilin)-mu (MAM) domain, an immunoglobulin (Ig) domain, and four fibronectin type III (FN3) repeats, a transmembrane domain, and an intracellular segment with a juxtamembrane domain similar to the cytoplasmic domain of classical cadherins and two tandem PTP domains. This model represents the second (repeat 2) PTP domain.


Pssm-ID: 350404 [Multi-domain]  Cd Length: 201  Bit Score: 103.26  E-value: 5.64e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 151 FICTQGPLDHTVDDFWWMIVQQKVEQIVMLcKTIETGKYKCAQYWPlamGEKKEVKGGIVVENVSGTKPMD---RDAEIQ 227
Cdd:cd14556    16 FIVTQHPLPNTVTDFWRLVYDYGCTSIVML-NQLDPKDQSCPQYWP---DEGSGTYGPIQVEFVSTTIDEDvisRIFRLQ 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 228 ITTlqvSFGDQKMSVRHLHWSDWP-DRGVPPCKLTSLELLSAV-----RGSRVPIVVHCSAGIGRTGTIVAIEYILERIa 301
Cdd:cd14556    92 NTT---RPQEGYRMVQQFQFLGWPrDRDTPPSKRALLKLLSEVekwqeQSGEGPIVVHCLNGVGRSGVFCAISSVCERI- 167
                         170       180       190
                  ....*....|....*....|....*....|...
gi 1972266719 302 ENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIH 334
Cdd:cd14556   168 KVENVVDVFQAVKTLRNHRPNMVETEEQYKFCY 200
R-PTPc-T-2 cd14634
PTP domain of receptor-type tyrosine-protein phosphatase T, repeat 2; Receptor-type ...
151-339 6.27e-19

PTP domain of receptor-type tyrosine-protein phosphatase T, repeat 2; Receptor-type tyrosine-protein phosphatase T (PTPRT), also known as receptor-type tyrosine-protein phosphatase rho (RPTP-rho or PTPrho), belongs to the type IIb subfamily of receptor protein tyrosine phosphatases (RPTPs), which belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRT is highly expressed in the nervous system and it plays a critical role in regulation of synaptic formation and neuronal development. It dephosphorylates a specific tyrosine residue in syntaxin-binding protein 1, a key component of synaptic vesicle fusion machinery, and regulates its binding to syntaxin 1. PTPRT has been identified as a potential candidate gene for autism spectrum disorder (ASD) susceptibility. It contains an extracellular region with an Meprin-A5 (neuropilin)-mu (MAM) domain, an immunoglobulin (Ig) domain, and four fibronectin type III (FN3) repeats, a transmembrane domain, and an intracellular segment with a juxtamembrane domain similar to the cytoplasmic domain of classical cadherins and two tandem PTP domains. This model represents the second (repeat 2) PTP domain.


Pssm-ID: 350482 [Multi-domain]  Cd Length: 206  Bit Score: 84.30  E-value: 6.27e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 151 FICTQGPLDHTVDDFWWMIVQQKVEQIVMLcKTIETGKYkCAQYWPlamgEKKE-VKGGIVVENVSGTKPMDRDAEIQIT 229
Cdd:cd14634    16 FIVTQHPLPNTVADFWRLVFDYNCSSVVML-NEMDAAQL-CMQYWP----EKTScCYGPIQVEFVSADIDEDIISRIFRI 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 230 TLQVSFGDQKMSVRHLHWSDWPD-RGVPPCKLTSLELLSAVR-------GSRVPIVVHCSAGIGRTGTIVAIEYILERIa 301
Cdd:cd14634    90 CNMARPQDGYRIVQHLQYIGWPAyRDTPPSKRSILKVVRRLEkwqeqydGREGRTVVHCLNGGGRSGTFCAICSVCEMI- 168
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1972266719 302 ENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHRVMLN 339
Cdd:cd14634   169 QQQNIIDVFHTVKTLRNNKSNMVETLEQYKFVYEVALE 206
R-PTPc-U-2 cd14637
PTP domain of receptor-type tyrosine-protein phosphatase U, repeat 2; Receptor-type ...
151-338 1.13e-16

PTP domain of receptor-type tyrosine-protein phosphatase U, repeat 2; Receptor-type tyrosine-protein phosphatase U (PTPRU), also known as pancreatic carcinoma phosphatase 2 (PCP-2), belongs to the type IIb subfamily of receptor protein tyrosine phosphatases (RPTPs), which belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRU/PCP-2 is the most distant member of the type IIb subfamily and may have a distinct biological function other than cell-cell aggregation. It localizes to the adherens junctions and directly binds and dephosphorylates beta-catenin, and regulates the balance between signaling and adhesive beta-catenin. It plays an important role in the maintenance of epithelial integrity. PTPRU contains an extracellular region with an Meprin-A5 (neuropilin)-mu (MAM) domain, an immunoglobulin (Ig) domain, and four fibronectin type III (FN3) repeats, a transmembrane domain, and an intracellular segment with a juxtamembrane domain similar to the cytoplasmic domain of classical cadherins and two tandem PTP domains. This model represents the second (repeat 2) PTP domain.


Pssm-ID: 350485 [Multi-domain]  Cd Length: 207  Bit Score: 77.64  E-value: 1.13e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 151 FICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGK-YKCAQYWPlamGEKKEVKGGIVVENVSGTKPMD---RDAEI 226
Cdd:cd14637    16 FIVTLHPLQNTTTDFWRLVYDYGCTSVVMLNQLNQSNSaWPCLQYWP---EPGLQQYGPMEVEFVSGSADEDivtRLFRV 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 227 Q-ITTLQvsfgDQKMSVRHLHWSDW-PDRGVPPCKLTSLELLSAV-------RGSRVpiVVHCSAGIGRTGTIVAIEYIL 297
Cdd:cd14637    93 QnITRLQ----EGHLMVRHFQFLRWsAYRDTPDSKKAFLHLLASVekwqresGEGRT--VVHCLNGGGRSGTYCASAMIL 166
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1972266719 298 ERIaenkQCPPMPDL---VKSLRDQRAYSIQTDMQYLYIHRVML 338
Cdd:cd14637   167 EMI----RCHNIVDVfyaVKTLRNYKPNMVETLEQYRFCYEIAL 206
R5-PTP-2 cd14550
PTP-like domain of R5 subfamily receptor-type tyrosine-protein phosphatases, repeat 2; The R5 ...
149-283 4.83e-15

PTP-like domain of R5 subfamily receptor-type tyrosine-protein phosphatases, repeat 2; The R5 subfamily of receptor-type phosphotyrosine phosphatases (RPTP) is composed of receptor-type tyrosine-protein phosphatase Z (PTPRZ) and G (PTPRG). They belong to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. They are type 1 integral membrane proteins consisting of an extracellular region with a carbonic anhydrase-like (CAH) and a fibronectin type III (FN3) domains, and an intracellular region with a catalytic PTP domain (repeat 1) proximal to the membrane, and a catalytically inactive PTP-fold domain (repeat 2) distal to the membrane. This model represents the inactive PTP-like domain (repeat 2).


Pssm-ID: 350398 [Multi-domain]  Cd Length: 200  Bit Score: 73.12  E-value: 4.83e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 149 KRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCaqYWPlamGEKKEVKGGIVVENVSGTKPMDRDAEIQI 228
Cdd:cd14550    14 NEFIITQHPLEHTIKDFWQMIWDHNSQTIVMLTDNELNEDEPI--YWP---TKEKPLECETFKVTLSGEDHSCLSNEIRL 88
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1972266719 229 TT----LQVSFGDQKMSVRHLHWSDWPDRGVPPckLTSLELLSAVR---GSRV-PIVVH-----CSAG 283
Cdd:cd14550    89 IVrdfiLESTQDDYVLEVRQFQCPSWPNPCSPI--HTVFELINTVQewaQQRDgPIVVHdryggVQAA 154
R-PTPc-M-2 cd14635
PTP domain of receptor-type tyrosine-protein phosphatase M, repeat 2; Receptor-type ...
151-338 1.38e-11

PTP domain of receptor-type tyrosine-protein phosphatase M, repeat 2; Receptor-type tyrosine-protein phosphatase M (PTPRM), also known as protein-tyrosine phosphatase mu (R-PTP-mu or PTPmu), belongs to the type IIb subfamily of receptor protein tyrosine phosphatases (RPTPs), which belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRM/PTPmu is a homophilic cell adhesion molecule expressed in CNS neurons and glia. It is required for E-, N-, and R-cadherin-dependent neurite outgrowth. Loss of PTPmu contributes to tumor cell migration and dispersal of human glioblastomas. PTPRM contains an extracellular region with an Meprin-A5 (neuropilin)-mu (MAM) domain, an immunoglobulin (Ig) domain, and four fibronectin type III (FN3) repeats, a transmembrane domain, and an intracellular segment with a juxtamembrane domain similar to the cytoplasmic domain of classical cadherins and two tandem PTP domains. This model represents the second (repeat 2) PTP domain.


Pssm-ID: 350483 [Multi-domain]  Cd Length: 206  Bit Score: 63.17  E-value: 1.38e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 151 FICTQGPLDHTVDDFWWMIVQQKVEQIVMLcKTIETGKYkCAQYWPLAMGEKkevKGGIVVENVSGTKPMDRDAEIQITT 230
Cdd:cd14635    16 FIVTQHPLPNTVKDFWRLVLDYHCTSIVML-NDVDPAQL-CPQYWPENGVHR---HGPIQVEFVSADLEEDIISRIFRIY 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 231 LQVSFGDQKMSVRHLHWSDWP-DRGVPPCKLTSLELLSAV-------RGSRVPIVVHCSAGIGRTGTIVAIEYILERIaE 302
Cdd:cd14635    91 NAARPQDGYRMVQQFQFLGWPmYRDTPVSKRSFLKLIRQVdkwqeeyNGGEGRTVVHCLNGGGRSGTFCAISIVCEML-R 169
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1972266719 303 NKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHRVML 338
Cdd:cd14635   170 HQRAVDVFHAVKTLRNNKPNMVDLLDQYKFCYEVAL 205
R-PTP-Z-2 cd17669
catalytic domain of receptor-type tyrosine-protein phosphatase Z, repeat 2; Receptor-type ...
151-338 3.11e-11

catalytic domain of receptor-type tyrosine-protein phosphatase Z, repeat 2; Receptor-type tyrosine-protein phosphatase Z (PTPRZ), also called receptor-type tyrosine-protein phosphatase zeta (R-PTP-zeta), belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. Three isoforms are generated by alternative splicing from a single PTPRZ gene: two transmembrane isoforms, PTPRZ-A and PTPRZ-B, and one secretory isoform, PTPRZ-S (also known as phosphacan); all are preferentially expressed in the central nervous system (CNS) as chondroitin sulfate (CS) proteoglycans. PTPRZ isoforms play important roles in maintaining oligodendrocyte precursor cells in an undifferentiated state. PTPRZ is a type 1 integral membrane protein consisting of an extracellular region with a carbonic anhydrase-like (CAH) and a fibronectin type III (FN3) domains, and an intracellular region with a catalytic PTP domain (repeat 1) proximal to the membrane, and a catalytically inactive PTP-fold domain (repeat 2) distal to the membrane. This model represents the inactive PTP-like domain (repeat 2).


Pssm-ID: 350507 [Multi-domain]  Cd Length: 204  Bit Score: 62.32  E-value: 3.11e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 151 FICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAqYWPlAMGEKKEVKGGIVVENVSGTKPMDRDAE--IQI 228
Cdd:cd17669    16 FIITQHPLLHTIKDFWRMIWDHNAQLIVMLPDGQNMAEDEFV-YWP-NKDEPINCETFKVTLIAEEHKCLSNEEKliIQD 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 229 TTLQVSFGDQKMSVRHLHWSDWPDRGVPPCKltSLELLSAVRGSRV----PIVVHCSAGIGRTGTIVAIEYILERIaENK 304
Cdd:cd17669    94 FILEATQDDYVLEVRHFQCPKWPNPDSPISK--TFELISIIKEEAAnrdgPMIVHDEHGGVTAGTFCALTTLMHQL-EKE 170
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1972266719 305 QCPPMPDLVKSLRDQRAySIQTDM-QYLYIHRVML 338
Cdd:cd17669   171 NSVDVYQVAKMINLMRP-GVFTDIeQYQFLYKAIL 204
R-PTPc-K-2 cd14636
PTP domain of receptor-type tyrosine-protein phosphatase K, repeat 2; Receptor-type ...
151-338 4.72e-11

PTP domain of receptor-type tyrosine-protein phosphatase K, repeat 2; Receptor-type tyrosine-protein phosphatase K (PTPRK), also known as receptor-type tyrosine-protein phosphatase kappa (RPTP-kappa or PTPkappa), belongs to the type IIb subfamily of receptor protein tyrosine phosphatases (RPTPs), which belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRK is widely expressed and has been shown to stimulate cell motility and neurite outgrowth. It is required for anti-proliferative and pro-migratory effects of TGF-beta, suggesting a role in regulation, maintenance, and restoration of cell adhesion. It is a potential tumour suppressor in primary central nervous system lymphomas, colorectal cancer, and breast cancer. It contains an extracellular region with an Meprin-A5 (neuropilin)-mu (MAM) domain, an immunoglobulin (Ig) domain, and four fibronectin type III (FN3) repeats, a transmembrane domain, and an intracellular segment with a juxtamembrane domain similar to the cytoplasmic domain of classical cadherins and two tandem PTP domains. This model represents the second (repeat 2) PTP domain.


Pssm-ID: 350484 [Multi-domain]  Cd Length: 206  Bit Score: 61.58  E-value: 4.72e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 151 FICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETgkYKCAQYWPlamgEKKEVK-GGIVVENVSGTKPMDRDAEI--- 226
Cdd:cd14636    16 FIVTQHPLPNTVKDFWRLVYDYGCTSIVMLNEVDLA--QGCPQYWP----EEGMLRyGPIQVECMSCSMDCDVISRIfri 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 227 -QITTLQVSFgdqkMSVRHLHWSDWPD-RGVPPCKLTSLELLSAVRGSRVP-------IVVHCSAGIGRTGTIVAIEYIL 297
Cdd:cd14636    90 cNLTRPQEGY----LMVQQFQYLGWAShREVPGSKRSFLKLILQVEKWQEEcdegegrTIIHCLNGGGRSGMFCAISIVC 165
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1972266719 298 ERIaENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHRVML 338
Cdd:cd14636   166 EMI-KRQNVVDVFHAVKTLRNSKPNMVETPEQYRFCYDVAL 205
R-PTP-G-2 cd17670
PTP-like domain of receptor-type tyrosine-protein phosphatase G, repeat 2; Receptor-type ...
151-339 1.50e-09

PTP-like domain of receptor-type tyrosine-protein phosphatase G, repeat 2; Receptor-type tyrosine-protein phosphatase G (PTPRG), also called protein-tyrosine phosphatase gamma (R-PTP-gamma), belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRG is an important tumor suppressor gene in multiple human cancers such as lung, ovarian, and breast cancers. It is widely expressed in many tissues, including the central nervous system, where it plays a role during neuroinflammation processes. It can dephosphorylate platelet-derived growth factor receptor beta (PDGFRB) and may play a role in PDGFRB-related infantile myofibromatosis. PTPRG is a type 1 integral membrane protein consisting of an extracellular region with a carbonic anhydrase-like (CAH) and a fibronectin type III (FN3) domains, and an intracellular region with a catalytic PTP domain (repeat 1) proximal to the membrane, and a catalytically inactive PTP-fold domain (repeat 2) distal to the membrane. This model represents the inactive PTP-like domain (repeat 2).


Pssm-ID: 350508 [Multi-domain]  Cd Length: 205  Bit Score: 57.38  E-value: 1.50e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 151 FICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAqYWPlAMGEKKEVKGGIVVENVSGTKPMDRDAEIQIT- 229
Cdd:cd17670    16 FIITQHPLPHTTKDFWRMIWDHNAQIIVMLPDNQGLAEDEFV-YWP-SREESMNCEAFTVTLISKDRLCLSNEEQIIIHd 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 230 -TLQVSFGDQKMSVRHLHWSDWPDRGVPPCklTSLELLSAVRGSRV----PIVVHCSAGIGRTGTIVAIEYILERIaENK 304
Cdd:cd17670    94 fILEATQDDYVLEVRHFQCPKWPNPDAPIS--STFELINVIKEEALtrdgPTIVHDEFGAVSAGTLCALTTLSQQL-ENE 170
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1972266719 305 QCPPMPDLVKSLRDQRAySIQTDM-QYLYIHRVMLN 339
Cdd:cd17670   171 NAVDVYQVAKMINLMRP-GVFTDIeQYQFLYKAMLS 205
CDKN3-like cd14505
cyclin-dependent kinase inhibitor 3 and similar proteins; This family is composed of ...
132-335 1.73e-09

cyclin-dependent kinase inhibitor 3 and similar proteins; This family is composed of eukaryotic cyclin-dependent kinase inhibitor 3 (CDKN3) and related archaeal and bacterial proteins. CDKN3 is also known as kinase-associated phosphatase (KAP), CDK2-associated dual-specificity phosphatase, cyclin-dependent kinase interactor 1 (CDI1), or cyclin-dependent kinase-interacting protein 2 (CIP2). It has been characterized as dual-specificity phosphatase, which function as a protein-serine/threonine phosphatase (EC 3.1.3.16) and protein-tyrosine-phosphatase (EC 3.1.3.48). It dephosphorylates CDK2 at a threonine residue in a cyclin-dependent manner, resulting in the inhibition of G1/S cell cycle progression. It also interacts with CDK1 and controls progression through mitosis by dephosphorylating CDC2. CDKN3 may also function as a tumor suppressor; its loss of function was found in a variety of cancers including glioblastoma and hepatocellular carcinoma. However, it has also been found over-expressed in many cancers such as breast, cervical, lung and prostate cancers, and may also have an oncogenic function.


Pssm-ID: 350355 [Multi-domain]  Cd Length: 163  Bit Score: 56.12  E-value: 1.73e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 132 PSDYVHANFVGCPMVPDKRFICTQGPLDHTVDDFWwmivQQKVEQIVMLCKTIETGKYKCAQYwplamGEKKEVKGgivv 211
Cdd:cd14505     6 LSMLGNAGSLGLTPCPGCKFKDHRRDLQADLEELK----DQGVDDVVTLCTDGELEELGVPDL-----LEQYQQAG---- 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 212 envsgtkpmdrdaeiqittlqvsfgdqkMSVRHLhwsDWPDRGVPP----CKLTSLELLSAVRGSRvPIVVHCSAGIGRT 287
Cdd:cd14505    73 ----------------------------ITWHHL---PIPDGGVPSdiaqWQELLEELLSALENGK-KVLIHCKGGLGRT 120
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 1972266719 288 GTIVAIeYILERiaenKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHR 335
Cdd:cd14505   121 GLIAAC-LLLEL----GDTLDPEQAIAAVRALRPGAIQTPKQENFLHQ 163
PTP_YopH-like cd14559
YopH and related bacterial protein tyrosine phosphatases; Yersinia outer protein H (YopH) ...
111-330 2.02e-08

YopH and related bacterial protein tyrosine phosphatases; Yersinia outer protein H (YopH) belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. YopH is an essential virulence determinant of the pathogenic bacterium by dephosphorylating several focal adhesion proteins including p130Cas in human epithelial cells, resulting in the disruption of focal adhesions and cell detachment from the extracellular matrix. It contains an N-terminal domain that contains signals required for TTSS-mediated delivery of YopH into host cells and a C-terminal catalytic PTP domain.


Pssm-ID: 350407 [Multi-domain]  Cd Length: 227  Bit Score: 54.33  E-value: 2.02e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 111 NRYADVPCQDQNIVlvaKPPAPSDYVHANfvgcpmvPDKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYK 190
Cdd:cd14559     1 NRFTNIQTRVSTPV---GKNLNANRVQIG-------NKNVAIACQYPKNEQLEDHLKMLADNRTPCLVVLASNKDIQRKG 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 191 CAQYWplamgeKKEVKGGIVVENVSGTKPMDRDAEIQIT--TLQVSFGDQKMSVRHLHWSDWPDRGVPPC---------- 258
Cdd:cd14559    71 LPPYF------RQSGTYGSVTVKSKKTGKDELVDGLKADmyNLKITDGNKTITIPVVHVTNWPDHTAISSeglkeladlv 144
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 259 ------KLTSLELL--SAVRGSRVPI-VVHCSAGIGRTGTIVAIEYILERiaENKQcpPMPDLVKSLRDQR-AYSIQTDM 328
Cdd:cd14559   145 nksaeeKRNFYKSKgsSAINDKNKLLpVIHCRAGVGRTGQLAAAMELNKS--PNNL--SVEDIVSDMRTSRnGKMVQKDE 220

                  ..
gi 1972266719 329 QY 330
Cdd:cd14559   221 QL 222
CDC14 COG2453
Protein-tyrosine phosphatase [Signal transduction mechanisms];
246-335 3.67e-07

Protein-tyrosine phosphatase [Signal transduction mechanisms];


Pssm-ID: 441989 [Multi-domain]  Cd Length: 140  Bit Score: 48.81  E-value: 3.67e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 246 HWSDWPDRGVPPckLTSL-----ELLSAVRGSRvPIVVHCSAGIGRTGTIVAIeYILERiaenkqCPPMPDLVKSLRDQR 320
Cdd:COG2453    51 LHLPIPDFGAPD--DEQLqeavdFIDEALREGK-KVLVHCRGGIGRTGTVAAA-YLVLL------GLSAEEALARVRAAR 120
                          90
                  ....*....|....*
gi 1972266719 321 AYSIQTDMQYLYIHR 335
Cdd:COG2453   121 PGAVETPAQRAFLER 135
PTP_DSP_cys cd14494
cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily; This ...
275-335 5.26e-07

cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily; This superfamily is composed of cys-based phosphatases, which includes classical protein tyrosine phosphatases (PTPs) as well as dual-specificity phosphatases (DUSPs or DSPs). They are characterized by a CxxxxxR conserved catalytic loop (where C is the catalytic cysteine, x is any amino acid, and R is an arginine). PTPs are part of the tyrosine phosphorylation/dephosphorylation regulatory mechanism, and are important in the response of the cells to physiologic and pathologic changes in their environment. DUSPs show more substrate diversity (including RNA and lipids) and include pTyr, pSer, and pThr phosphatases.


Pssm-ID: 350344 [Multi-domain]  Cd Length: 113  Bit Score: 47.73  E-value: 5.26e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1972266719 275 PIVVHCSAGIGRTGTIVAIeYILERiaenkQCPPMPDLVKSLRDQR-AYSIQTDMQYLYIHR 335
Cdd:cd14494    58 PVLVHCKAGVGRTGTLVAC-YLVLL-----GGMSAEEAVRIVRLIRpGGIPQTIEQLDFLIK 113
DUSP23 cd14504
dual specificity phosphatase 23; Dual specificity phosphatase 23 (DUSP23), also known as ...
275-329 9.78e-07

dual specificity phosphatase 23; Dual specificity phosphatase 23 (DUSP23), also known as VH1-like phosphatase Z (VHZ) or low molecular mass dual specificity phosphatase 3 (LDP-3), functions as a protein-serine/threonine phosphatase (EC 3.1.3.16) and a protein-tyrosine-phosphatase (EC 3.1.3.48). It deactivates its MAPK substrates by dephosphorylating the threonine and tyrosine residues in the conserved Thr-Xaa-Tyr motif residing in their activation sites. DUSP23 is an atypical DUSP; it contains the catalytic dual specificity phosphatase domain but lacks the N-terminal Cdc25/rhodanese-like domain that is present in typical DUSPs or MKPs. It is able to enhance activation of JNK and p38 MAPK, and has been shown to dephosphorylate p44-ERK1 (MAPK3) in vitro. It has been associated with cell growth and human primary cancers. It has also been identified as a cell-cell adhesion regulatory protein; it promotes the dephosphorylation of beta-catenin at Tyr 142 and enhances the interaction between alpha- and beta-catenin.


Pssm-ID: 350354 [Multi-domain]  Cd Length: 142  Bit Score: 47.66  E-value: 9.78e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1972266719 275 PIVVHCSAGIGRTGTIVAIeYIlerIAENKQcpPMPDLVKSLRDQRAYSIQTDMQ 329
Cdd:cd14504    84 AVLVHCLAGKGRTGTMLAC-YL---VKTGKI--SAVDAINEIRRIRPGSIETSEQ 132
PTP_PTPDC1 cd14506
protein tyrosine phosphatase domain of PTP domain-containing protein 1; protein tyrosine ...
250-334 4.66e-06

protein tyrosine phosphatase domain of PTP domain-containing protein 1; protein tyrosine phosphatase domain-containing protein 1 (PTPDC1) is an uncharacterized non-receptor class protein-tyrosine phosphatase (PTP). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. Small interfering RNA (siRNA) knockdown of the ptpdc1 gene is associated with elongated cilia.


Pssm-ID: 350356 [Multi-domain]  Cd Length: 206  Bit Score: 46.96  E-value: 4.66e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 250 WPDRGVPP-------CKLTSLELLSAVRgsrvpIVVHCSAGIGRTGTIVAIEYI-LERIaenkqcpPMPDLVKSLRDQRA 321
Cdd:cd14506    84 WKDYGVPSlttildiVKVMAFALQEGGK-----VAVHCHAGLGRTGVLIACYLVyALRM-------SADQAIRLVRSKRP 151
                          90
                  ....*....|...
gi 1972266719 322 YSIQTDMQYLYIH 334
Cdd:cd14506   152 NSIQTRGQVLCVR 164
PTZ00242 PTZ00242
protein tyrosine phosphatase; Provisional
249-331 3.52e-05

protein tyrosine phosphatase; Provisional


Pssm-ID: 185524 [Multi-domain]  Cd Length: 166  Bit Score: 43.86  E-value: 3.52e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 249 DWP-DRGVPPCK--LTS-LELLSAVRGSRVP----IVVHCSAGIGRTGTIVAIEYIleriaENKQCPPMpDLVKSLRDQR 320
Cdd:PTZ00242   66 DWPfDDGAPPPKavIDNwLRLLDQEFAKQSTppetIAVHCVAGLGRAPILVALALV-----EYGGMEPL-DAVGFVREKR 139
                          90
                  ....*....|..
gi 1972266719 321 AYSI-QTDMQYL 331
Cdd:PTZ00242  140 KGAInQTQLQFL 151
PTP-IVa cd14500
protein tyrosine phosphatase type IVA family; Protein tyrosine phosphatases type IVA (PTP-IVa), ...
244-348 3.67e-04

protein tyrosine phosphatase type IVA family; Protein tyrosine phosphatases type IVA (PTP-IVa), also known as protein-tyrosine phosphatases of regenerating liver (PRLs) constitute a family of small, prenylated phosphatases that are the most oncogenic of all PTPs. They stimulate progression from G1 into S phase during mitosis and enhances cell proliferation, cell motility and invasive activity, and promotes cancer metastasis. They associate with magnesium transporters of the cyclin M (CNNM) family, which results in increased intracellular magnesium levels that promote oncogenic transformation. Vertebrates contain three members: PRL-1, PRL-2, and PRL-3.


Pssm-ID: 350350 [Multi-domain]  Cd Length: 156  Bit Score: 40.67  E-value: 3.67e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719 244 HLHwsDWP--DRGVPPCKLTS--LELLSAV----RGSRVPIVVHCSAGIGRTGTIVA---IEYILERIaenkqcppmpDL 312
Cdd:cd14500    60 KVH--DWPfdDGSPPPDDVVDdwLDLLKTRfkeeGKPGACIAVHCVAGLGRAPVLVAialIELGMKPE----------DA 127
                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1972266719 313 VKSLRDQRAYSI-QTDMQYlyihrvmlnyfLEKYKDK 348
Cdd:cd14500   128 VEFIRKKRRGAInSKQLQF-----------LEKYKPK 153
CDC14_C cd14499
C-terminal dual-specificity phosphatase domain of CDC14 family proteins; The cell division ...
251-292 8.65e-04

C-terminal dual-specificity phosphatase domain of CDC14 family proteins; The cell division control protein 14 (CDC14) family is highly conserved in all eukaryotes, although the roles of its members seem to have diverged during evolution. Yeast Cdc14, the best characterized member of this family, is a dual-specificity phosphatase that plays key roles in cell cycle control. It preferentially dephosphorylates cyclin-dependent kinase (CDK) targets, which makes it the main antagonist of CDK in the cell. Cdc14 functions at the end of mitosis and it triggers the events that completely eliminates the activity of CDK and other mitotic kinases. It is also involved in coordinating the nuclear division cycle with cytokinesis through the cytokinesis checkpoint, and in chromosome segregation. Cdc14 phosphatases also function in DNA replication, DNA damage checkpoint, and DNA repair. Vertebrates may contain more than one Cdc14 homolog; humans have three (CDC14A, CDC14B, and CDC14C). CDC14 family proteins contain a highly conserved N-terminal pseudophosphatase domain that contributes to substrate specificity and a C-terminal catalytic dual-specificity phosphatase domain with the PTP signature motif.


Pssm-ID: 350349 [Multi-domain]  Cd Length: 174  Bit Score: 39.74  E-value: 8.65e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1972266719 251 PDRGVPPCKLTSlELLSAVRGSRVPIVVHCSAGIGRTGTIVA 292
Cdd:cd14499    88 PDGSTPSDDIVK-KFLDICENEKGAIAVHCKAGLGRTGTLIA 128
TpbA-like cd14529
bacterial protein tyrosine and dual-specificity phosphatases related to Pseudomonas aeruginosa ...
275-293 3.57e-03

bacterial protein tyrosine and dual-specificity phosphatases related to Pseudomonas aeruginosa TpbA; This subfamily contains bacterial protein tyrosine phosphatases (PTPs) and dual-specificity phosphatases (DUSPs) related to Pseudomonas aeruginosa TpbA, a DUSP that negatively regulates biofilm formation by converting extracellular quorum sensing signals and to Mycobacterium tuberculosis PtpB, a PTP virulence factor that attenuates host immune defenses by interfering with signal transduction pathways in macrophages. PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides, while DUSPs function as protein-serine/threonine phosphatases (EC 3.1.3.16) and PTPs.


Pssm-ID: 350378 [Multi-domain]  Cd Length: 158  Bit Score: 37.74  E-value: 3.57e-03
                          10
                  ....*....|....*....
gi 1972266719 275 PIVVHCSAGIGRTGTIVAI 293
Cdd:cd14529    91 PVLIHCKHGKDRTGLVSAL 109
PTP_PTEN-like cd14497
protein tyrosine phosphatase-like domain of phosphatase and tensin homolog and similar ...
244-292 3.84e-03

protein tyrosine phosphatase-like domain of phosphatase and tensin homolog and similar proteins; Phosphatase and tensin homolog (PTEN) is a tumor suppressor that acts as a dual-specificity protein phosphatase and as a lipid phosphatase. It dephosphorylates phosphoinositide trisphosphate. In addition to PTEN, this family includes tensins, voltage-sensitive phosphatases (VSPs), and auxilins. They all contain a protein tyrosine phosphatase-like domain although not all are active phosphatases. Tensins are intracellular proteins that act as links between the extracellular matrix and the cytoskeleton, and thereby mediate signaling for cell shape and motility, and they may or may not have phosphatase activity. VSPs are phosphoinositide phosphatases with substrates that include phosphatidylinositol-4,5-diphosphate and phosphatidylinositol-3,4,5-trisphosphate. Auxilins are J domain-containing proteins that facilitate Hsc70-mediated dissociation of clathrin from clathrin-coated vesicles, and they do not exhibit phosphatase activity.


Pssm-ID: 350347 [Multi-domain]  Cd Length: 160  Bit Score: 37.56  E-value: 3.84e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1972266719 244 HLHWSDWPDRGVPPckltsLELLSAV---------RGSRVPIVVHCSAGIGRTGTIVA 292
Cdd:cd14497    62 RVLHYGFPDHHPPP-----LGLLLEIvddidswlsEDPNNVAVVHCKAGKGRTGTVIC 114
DSPc smart00195
Dual specificity phosphatase, catalytic domain;
187-320 4.18e-03

Dual specificity phosphatase, catalytic domain;


Pssm-ID: 214551 [Multi-domain]  Cd Length: 138  Bit Score: 37.26  E-value: 4.18e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972266719  187 GKYKCAQywPLAMGEKKEVKggiVVENVSGTKPMDRDAEIQITTLQVSFgdqkmsvrhlHWSDWPDRGVPPCKltslELL 266
Cdd:smart00195  11 GSYSDAL--NLALLKKLGIT---HVINVTNEVPNYNGSDFTYLGVPIDD----------NTETKISPYFPEAV----EFI 71
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1972266719  267 SAVRGSRVPIVVHCSAGIGRTGTIVaIEYILERiaenKQCpPMPDLVKSLRDQR 320
Cdd:smart00195  72 EDAESKGGKVLVHCQAGVSRSATLI-IAYLMKT----RNM-SLNDAYDFVKDRR 119
DSPc pfam00782
Dual specificity phosphatase, catalytic domain; Ser/Thr and Tyr protein phosphatases. The ...
264-299 4.92e-03

Dual specificity phosphatase, catalytic domain; Ser/Thr and Tyr protein phosphatases. The enzyme's tertiary fold is highly similar to that of tyrosine-specific phosphatases, except for a "recognition" region.


Pssm-ID: 395632 [Multi-domain]  Cd Length: 127  Bit Score: 36.86  E-value: 4.92e-03
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 1972266719 264 ELLSAVRGSRVPIVVHCSAGIGRTGTIVaIEYILER 299
Cdd:pfam00782  60 EFIDDARQKGGKVLVHCQAGISRSATLI-IAYLMKT 94
Y_phosphatase3 pfam13350
Tyrosine phosphatase family; This family is closely related to the pfam00102 and pfam00782 ...
264-293 5.83e-03

Tyrosine phosphatase family; This family is closely related to the pfam00102 and pfam00782 families.


Pssm-ID: 463853 [Multi-domain]  Cd Length: 243  Bit Score: 37.99  E-value: 5.83e-03
                          10        20        30
                  ....*....|....*....|....*....|
gi 1972266719 264 ELLSAVRGSRVPIVVHCSAGIGRTGTIVAI 293
Cdd:pfam13350 120 ALFEALADNDGPVLFHCTAGKDRTGVAAAL 149
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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