|
Name |
Accession |
Description |
Interval |
E-value |
| SOGA |
pfam11365 |
Protein SOGA; The SOGA (suppressor of glucose by autophagy) family consists of proteins SOGA1, ... |
521-615 |
1.38e-36 |
|
Protein SOGA; The SOGA (suppressor of glucose by autophagy) family consists of proteins SOGA1, SOGA2, and SOGA3. SOGA1 regulates autophagy by playing a role in the reduction of glucose production in an adiponectin and insulin dependent manner.
Pssm-ID: 463264 [Multi-domain] Cd Length: 95 Bit Score: 132.81 E-value: 1.38e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 521 DNEDLKCQLQFVKEEAALMRKKMAKIDKEKDRFEHELQKYRSFYGDLDSPLPKGEAGGPPSTREAELKLRLRLVEEEANI 600
Cdd:pfam11365 1 SSAELRRQLQFVEEEAELLRRSLSEIEDHNKQLTNELNKYKSKYGPDESSLSDGEGGGSDSSREAELQEELKLARLQINE 80
|
90
....*....|....*
gi 2182782248 601 LGRKIVELEVENRGL 615
Cdd:pfam11365 81 LSGKVMKLQYENRVL 95
|
|
| SOGA |
pfam11365 |
Protein SOGA; The SOGA (suppressor of glucose by autophagy) family consists of proteins SOGA1, ... |
641-729 |
8.88e-36 |
|
Protein SOGA; The SOGA (suppressor of glucose by autophagy) family consists of proteins SOGA1, SOGA2, and SOGA3. SOGA1 regulates autophagy by playing a role in the reduction of glucose production in an adiponectin and insulin dependent manner.
Pssm-ID: 463264 [Multi-domain] Cd Length: 95 Bit Score: 130.50 E-value: 8.88e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 641 SLSELRQHLQLVEDETELLRRNVADLEEQNKRITAELNKYKYKSGGHDSARHH------DNAKTEALQEELKAARLQINE 714
Cdd:pfam11365 1 SSAELRRQLQFVEEEAELLRRSLSEIEDHNKQLTNELNKYKSKYGPDESSLSDgegggsDSSREAELQEELKLARLQINE 80
|
90
....*....|....*
gi 2182782248 715 LSGKVMQLQYENRVL 729
Cdd:pfam11365 81 LSGKVMKLQYENRVL 95
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
454-723 |
9.54e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 69.32 E-value: 9.54e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 454 ELENVEEKRTTTEDENEKLRQQLIEVEIAKQALQNELEKMKELSLKRR-----GSKDLPKSEKKAQQTptEEDNEDLKCQ 528
Cdd:TIGR02168 678 EIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSrqisaLRKDLARLEAEVEQL--EERIAQLSKE 755
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 529 LQFVKEEAALMRKKMAKIDKEKDRFEHELQKYRSFYGDLDSPLPKG-EAGGPPSTREAELKLRLRLVEEEANILGRKIVE 607
Cdd:TIGR02168 756 LTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALrEALDELRAELTLLNEEAANLRERLESLERRIAA 835
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 608 LEVENRGLKAELDDLRGDdfNGSANPLMREQSESLSELRQHLQLVEDETELLRRNVADLEEQNKRITAELNKykyksggH 687
Cdd:TIGR02168 836 TERRLEDLEEQIEELSED--IESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRE-------L 906
|
250 260 270
....*....|....*....|....*....|....*.
gi 2182782248 688 DSARHHDNAKTEALQEELKAARLQINELSGKVMQLQ 723
Cdd:TIGR02168 907 ESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQ 942
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
367-673 |
2.01e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 68.16 E-value: 2.01e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 367 KNEIDELRTEMDEMRDTFFEEDAcQLQEMRHELERANKNCRILQYRLRKAERkrlryaQTGEIDGELLRSLEQDLKVAKD 446
Cdd:TIGR02168 676 RREIEELEEKIEELEEKIAELEK-ALAELRKELEELEEELEQLRKELEELSR------QISALRKDLARLEAEVEQLEER 748
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 447 VSvRLHHELENVEEKRTTTEDENEKLRQQLIEVEIAKQALQNELEKMKElslkRRGSKDLPKSEKKAQQTPTEEDNEDLK 526
Cdd:TIGR02168 749 IA-QLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKE----ELKALREALDELRAELTLLNEEAANLR 823
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 527 CQLQFVKEEAALMRKKMAKIDKEKDRFEHELQKYRSFYGDLDSPLPKGEAG--------GPPSTREAELKLRLRLVEEEA 598
Cdd:TIGR02168 824 ERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESEleallnerASLEEALALLRSELEELSEEL 903
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 599 NILGRKIVELEVENRGLKAELDDLRGD------DFNGSANPLMREQSESLSELRQHLQLVEDETELLRRNVADLEEQNKR 672
Cdd:TIGR02168 904 RELESKRSELRRELEELREKLAQLELRleglevRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKE 983
|
.
gi 2182782248 673 I 673
Cdd:TIGR02168 984 L 984
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
408-725 |
2.28e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 58.14 E-value: 2.28e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 408 ILQYRLRK--AERKrlryaqtgeidgelLRSLEQDLKVAKDVSVRLHHELENVEEKRTTTEDENEkLRQQLIEVEIAKQA 485
Cdd:TIGR02168 167 ISKYKERRkeTERK--------------LERTRENLDRLEDILNELERQLKSLERQAEKAERYKE-LKAELRELELALLV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 486 LQ-NEL-EKMKELSLKRRGSKDLPKSEKKAQQTpTEEDNEDLKCQLQFVKEEAALMRKKMAKIDKEKDRFEHELQKYRSF 563
Cdd:TIGR02168 232 LRlEELrEELEELQEELKEAEEELEELTAELQE-LEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRER 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 564 YGDLDSPLPKGEAggppstREAELKLRLRLVEEEANILGRKIVELEVENRGLKAELDDLRGDdfngsanplmreqsesLS 643
Cdd:TIGR02168 311 LANLERQLEELEA------QLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAE----------------LE 368
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 644 ELRQHLQLVEDETELLRRNVADLEEQNKRITAELNkyKYKSGGHDSARHHDNAKTEALQEELKAARLQINELSGKVMQLQ 723
Cdd:TIGR02168 369 ELESRLEELEEQLETLRSKVAQLELQIASLNNEIE--RLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELE 446
|
..
gi 2182782248 724 YE 725
Cdd:TIGR02168 447 EE 448
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
358-625 |
4.70e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 53.79 E-value: 4.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 358 KLREENETLKNEIDELRTEMDEMRDTFFEEDAcQLQEMRHELERANKNCRILQYRLRKAERKRLRYAQTGEIDGELLRSL 437
Cdd:COG1196 250 ELEAELEELEAELAELEAELEELRLELEELEL-ELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAEL 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 438 EQDLKVAKDVSVRLHHELENVEEKRTTTEDENEKLRQQLIEVEIAKQALQNELEKMKELSLkrrgskdlpksEKKAQQTP 517
Cdd:COG1196 329 EEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELL-----------EALRAAAE 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 518 TEEDNEDLKCQLQFVKEEAALMRKKMAKIDKEKDRFEHELQKYRSfygdldsplpkgeaggppstREAELKLRLRLVEEE 597
Cdd:COG1196 398 LAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEE--------------------ALEEAAEEEAELEEE 457
|
250 260
....*....|....*....|....*...
gi 2182782248 598 ANILGRKIVELEVENRGLKAELDDLRGD 625
Cdd:COG1196 458 EEALLELLAELLEEAALLEAALAELLEE 485
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
360-677 |
5.71e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 53.79 E-value: 5.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 360 REENETLKNEIDELRTEMDEMRDTFFEEDAcQLQEMRHELERANKNCRILQYRLRKAERKRLRYAQTGEIDGELLRSLEQ 439
Cdd:COG1196 308 EERRRELEERLEELEEELAELEEELEELEE-ELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAE 386
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 440 DLKVAKDVSVRLHHELENVEEKRTTTEDENEKLRQQLIEVEIAKQALQNELEKMKELSLKRRgskdlpkSEKKAQQTPTE 519
Cdd:COG1196 387 ELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAA-------EEEAELEEEEE 459
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 520 EDNEDLKCQLQFVKEEAALMRKKMAKIDKEKDRFEHELQKYRSFYGDLDSPLPKGEAGGPPSTREAELKLRLRLVEEEAN 599
Cdd:COG1196 460 ALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAA 539
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 600 I---LGRKIVELEVENRGLKAELDDLRGDDFNGSAN--PLMREQSESLSELRQHLQLVEDETELLRRNVADLEEQNKRIT 674
Cdd:COG1196 540 LeaaLAAALQNIVVEDDEVAAAAIEYLKAAKAGRATflPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLG 619
|
...
gi 2182782248 675 AEL 677
Cdd:COG1196 620 DTL 622
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
358-732 |
1.07e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 52.46 E-value: 1.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 358 KLREENETLKNEIDELRTEMDEMrdtffeEDACQLQEMRHELERANKNCRILQYRLRKAERKRLRYAQTGEIdgelLRSL 437
Cdd:COG4717 99 ELEEELEELEAELEELREELEKL------EKLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEE----LEEL 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 438 EQDLKVAKDVSVRLHHELENVEEKR-TTTEDENEKLRQQLIEVEIAKQALQNELE----KMKELSLKRRGSKDLPKSEKK 512
Cdd:COG4717 169 EAELAELQEELEELLEQLSLATEEElQDLAEELEELQQRLAELEEELEEAQEELEeleeELEQLENELEAAALEERLKEA 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 513 AQ-------------QTPTEEDNED------------LKCQLQFVKEEAALMRKKMAKIDKEKDRFEHELQKYRSFYgdl 567
Cdd:COG4717 249 RLllliaaallallgLGGSLLSLILtiagvlflvlglLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELL--- 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 568 dsplpkgeaggppstreAELKLRLRLVEEEANILGRKIVELEVENRGLKAELDDLRGDDFNGSANPLMRE-QSESLSELR 646
Cdd:COG4717 326 -----------------AALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLAEaGVEDEEELR 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 647 QHLQLVEDETELLRRnvadLEEQNKRITAELNKYKYKSGGHDSARHhdNAKTEALQEELKAARLQINELSGKVMQLQYEN 726
Cdd:COG4717 389 AALEQAEEYQELKEE----LEELEEQLEELLGELEELLEALDEEEL--EEELEELEEELEELEEELEELREELAELEAEL 462
|
....*.
gi 2182782248 727 RVLMSN 732
Cdd:COG4717 463 EQLEED 468
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
358-561 |
3.58e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 51.21 E-value: 3.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 358 KLREENETLKNEIDELRTEMDEMRDTFFEEDAcQLQEMRHELERANKNCRILQYRLRKAERKRLRYA-------QTGEID 430
Cdd:TIGR02168 257 ELTAELQELEEKLEELRLEVSELEEEIEELQK-ELYALANEISRLEQQKQILRERLANLERQLEELEaqleeleSKLDEL 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 431 GELLRSLEQDLKVAKDVSVRLHHELENVEEKRTTTEDENEKLRQQLIEVEIAKQALQNELEK-MKELSLKRRGSKDLPKS 509
Cdd:TIGR02168 336 AEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASlNNEIERLEARLERLEDR 415
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 2182782248 510 EKKAQQTPTEEDNEDLKCQLQFVKEEAALMRKKMAKIDKEKDRFEHELQKYR 561
Cdd:TIGR02168 416 RERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELR 467
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
368-723 |
4.21e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 50.89 E-value: 4.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 368 NEIDELRTEmdemRDTFFEEDAC---QLQEMRHELERANKncrilQYRLRKAERKRLRYAQTG----------EIDGELL 434
Cdd:pfam15921 356 SELTEARTE----RDQFSQESGNlddQLQKLLADLHKREK-----ELSLEKEQNKRLWDRDTGnsitidhlrrELDDRNM 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 435 --RSLEQDLKVAKD----------VSVRLHHE-LENVEEKRTTTEDENEKLRQQLIEVEIAKQALQNELEKMKELslkrr 501
Cdd:pfam15921 427 evQRLEALLKAMKSecqgqmerqmAAIQGKNEsLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDL----- 501
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 502 gSKDLPKSEKKAQQTPTE----EDNEDLKCQ-----------LQFVKEEAALMRKKMAKIDKEKDRFEHELQKYRSFYGD 566
Cdd:pfam15921 502 -TASLQEKERAIEATNAEitklRSRVDLKLQelqhlknegdhLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQ 580
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 567 ldsplpKGEAGGPPSTREAELKLRL---RLVEEEANIL----GRKIVELEVENRGLKAELDDL--RGDDFNGSANPLMRE 637
Cdd:pfam15921 581 ------HGRTAGAMQVEKAQLEKEIndrRLELQEFKILkdkkDAKIRELEARVSDLELEKVKLvnAGSERLRAVKDIKQE 654
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 638 QSESLSEL---RQHLQLVEDETELLRRNVAD-----------LEEQNKRITAELNKYKYKSGGHDSARHHDNAKTEALQE 703
Cdd:pfam15921 655 RDQLLNEVktsRNELNSLSEDYEVLKRNFRNkseemetttnkLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQK 734
|
410 420
....*....|....*....|
gi 2182782248 704 ELKAARLQINELSGKVMQLQ 723
Cdd:pfam15921 735 QITAKRGQIDALQSKIQFLE 754
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
358-503 |
4.38e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.68 E-value: 4.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 358 KLREENETLKNEIDELRTEMDEMRDTFFEEDACQLQEMRHELERANKncrilqyRLRKAERKRLRYAQtgeidgeLLRSL 437
Cdd:COG4913 306 RLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLER-------ELEERERRRARLEA-------LLAAL 371
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2182782248 438 EQDLKVAKDVSVRLHHElenVEEKRTTTEDENEKLRQQLIEVEIAKQALQNEL-EKMKEL-SLKRRGS 503
Cdd:COG4913 372 GLPLPASAEEFAALRAE---AAALLEALEEELEALEEALAEAEAALRDLRRELrELEAEIaSLERRKS 436
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
358-681 |
4.62e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 50.83 E-value: 4.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 358 KLREENETLKNEIDELRTEMDEMrdtffEEDACQLQEMRHELERANKNCRILQYRLRKAERKRLRYaqtgEIDGELLRSL 437
Cdd:PRK03918 235 ELKEEIEELEKELESLEGSKRKL-----EEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEY----IKLSEFYEEY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 438 EQDLKVAKDVSVRLHHELENVEEKRTTTEDENEKLRqqliEVEIAKQALQNELEKMKELSLKRRGSKDLPKSEKKAQQTP 517
Cdd:PRK03918 306 LDELREIEKRLSRLEEEINGIEERIKELEEKEERLE----ELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 518 TEEDNEDLKCQLQFVKEEAALMRKKMAKIDKEKDRFEHELQKYRSFYGDLDSPLPKGEAGGPPSTREAELKLRLRLVEEE 597
Cdd:PRK03918 382 TGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELLEEYTAEL 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 598 ANILGRKIvELEVENRGLKAELDDLRGDDFNGSANPLMREQSESLSELRQHLQLV--------EDETELLRRNVADLEEQ 669
Cdd:PRK03918 462 KRIEKELK-EIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYnleelekkAEEYEKLKEKLIKLKGE 540
|
330
....*....|..
gi 2182782248 670 NKRITAELNKYK 681
Cdd:PRK03918 541 IKSLKKELEKLE 552
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
359-617 |
7.34e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 49.74 E-value: 7.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 359 LREENETLKNEIDELRTEMDEMRDtffEEDACQLQEMRH----ELERANKNCRILQ-------YRLRKAERKRLRYAQTG 427
Cdd:pfam17380 344 MERERELERIRQEERKRELERIRQ---EEIAMEISRMRElerlQMERQQKNERVRQeleaarkVKILEEERQRKIQQQKV 420
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 428 E---IDGELLRSLEQDLKVAKDVSVRlhhELENVEEKRTTTEDENEKLRQQLIEVEIAKQALQNELEKMKELSLKRRgsK 504
Cdd:pfam17380 421 EmeqIRAEQEEARQREVRRLEEERAR---EMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRR--K 495
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 505 DLPKSEKKAQQTPTEEDNEDLKCQLQFVKEEAALMRKKMAKIDKEKDRFEHELQKYRSFYGDLdsplpkgeaggppsTRE 584
Cdd:pfam17380 496 ILEKELEERKQAMIEEERKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQM--------------RKA 561
|
250 260 270
....*....|....*....|....*....|...
gi 2182782248 585 AELKLRLRLVEEEANILgRKIVELEVENRGLKA 617
Cdd:pfam17380 562 TEERSRLEAMEREREMM-RQIVESEKARAEYEA 593
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
358-722 |
9.40e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 49.63 E-value: 9.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 358 KLREENETLKNEIDELRTEMDEMRDTF-------------FEEDACQLQEMRHELERANKNCRILQYRLR--KAERKRLR 422
Cdd:TIGR04523 222 ELKKQNNQLKDNIEKKQQEINEKTTEIsntqtqlnqlkdeQNKIKKQLSEKQKELEQNNKKIKELEKQLNqlKSEISDLN 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 423 YAQTGEIDGEL----------LRSLEQDLKVAKDVSVRLHHELENVEEKRTTTEDENEKLRQQLIE-------------- 478
Cdd:TIGR04523 302 NQKEQDWNKELkselknqekkLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEkqneieklkkenqs 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 479 -------VEIAKQALQNELEKMKELSLKRRG---SKDLPKSEKKAQQTPTEEDNEDLKCQLQFVKEEAALMRKKMAKIDK 548
Cdd:TIGR04523 382 ykqeiknLESQINDLESKIQNQEKLNQQKDEqikKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDN 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 549 EKDRFEHELQKYRSFYGDLDSPLPKGEAGGPPSTRE-AELKLRLRLVEEEANILGRKIVELEVENRGLKAEL-------- 619
Cdd:TIGR04523 462 TRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKElKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKkekeskis 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 620 ---DDLRGDDFNGSANPL---MREQSESLSELRQHLQLVEDETELLRRNVADLEEQNKRITAELNKYKYKSGGHDSARHH 693
Cdd:TIGR04523 542 dleDELNKDDFELKKENLekeIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEK 621
|
410 420
....*....|....*....|....*....
gi 2182782248 694 DNAKTEALQEELKaarlQINELSGKVMQL 722
Cdd:TIGR04523 622 AKKENEKLSSIIK----NIKSKKNKLKQE 646
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
359-715 |
1.87e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.91 E-value: 1.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 359 LREENETLKNEIDELRTEMDEMRDtffeedacQLQEMRHELERANKNCRILQYRLRKAERKrlryaqtgeidgelLRSLE 438
Cdd:TIGR02169 693 LQSELRRIENRLDELSQELSDASR--------KIGEIEKEIEQLEQEEEKLKERLEELEED--------------LSSLE 750
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 439 QDLKVAKDVSVRLHHELENVEEKRTTTEDENEKLRQQLIEVEIakQALQNELEKMKELSLKRRGS-----KDLPKSEKKA 513
Cdd:TIGR02169 751 QEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRI--PEIQAELSKLEEEVSRIEARlreieQKLNRLTLEK 828
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 514 QQTPTE-----EDNEDLKCQLQFVKEEAALMRKKMAKIDKEKDRFEHELQKYRSFYGDLDSPLPKGEAGGppstreAELK 588
Cdd:TIGR02169 829 EYLEKEiqelqEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQL------RELE 902
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 589 LRLRLVEEEANILGRKIVELEVENRGLKAELDDLRGDDFNGSANPlmrEQSESLSELRQHLQLVEDETELLRRNVADLEE 668
Cdd:TIGR02169 903 RKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIP---EEELSLEDVQAELQRVEEEIRALEPVNMLAIQ 979
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2182782248 669 QNKRITAELNKYKyksgghdsarhhdnAKTEALQEELKAARLQINEL 715
Cdd:TIGR02169 980 EYEEVLKRLDELK--------------EKRAKLEEERKAILERIEEY 1012
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
361-725 |
3.44e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 47.75 E-value: 3.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 361 EENETLKNEIDELRTEMDEMRDtffeedacQLQEMRHELERANKNCRILQYRLRKAERKRLRYAQTGEIDGELLRS---L 437
Cdd:PRK03918 286 KELKEKAEEYIKLSEFYEEYLD--------ELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRleeL 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 438 EQDLKVAKDVSVRLhHELENVEEKRttTEDENEKLRQQLIEVEIAKQALQNELEKMKEL--SLKRRGS---KDLPKSEKK 512
Cdd:PRK03918 358 EERHELYEEAKAKK-EELERLKKRL--TGLTPEKLEKELEELEKAKEEIEEEISKITARigELKKEIKelkKAIEELKKA 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 513 AQQTP------TEEDNEDLKcqlqfvkeeaALMRKKMAKIDKEKDRFEHELQKYRSFYGDLDSPLPKgeagGPPSTREAE 586
Cdd:PRK03918 435 KGKCPvcgrelTEEHRKELL----------EEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKK----ESELIKLKE 500
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 587 LKLRLRLVEEEANILGRKIVELEVEN-RGLKAELDDLRGDDFN-----GSANPLMREQSESLSELRQ-HLQLVEDETELL 659
Cdd:PRK03918 501 LAEQLKELEEKLKKYNLEELEKKAEEyEKLKEKLIKLKGEIKSlkkelEKLEELKKKLAELEKKLDElEEELAELLKELE 580
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2182782248 660 RRNVADLEEQNKRItAELNKYKYKSGGHDSARHHDNAKTEAL---QEELKAARLQINELSGKVMQLQYE 725
Cdd:PRK03918 581 ELGFESVEELEERL-KELEPFYNEYLELKDAEKELEREEKELkklEEELDKAFEELAETEKRLEELRKE 648
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
414-723 |
6.49e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 46.85 E-value: 6.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 414 RKAER-KRLRyAQTGEIDGEL----LRSLEQDLKVAKDVSVRLHHELENVEEKRTTTEDENEKLRQQLIEVEIAKQALQN 488
Cdd:COG1196 210 EKAERyRELK-EELKELEAELlllkLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 489 ELekmkelslkRRGSKDLPKSEKkaQQTPTEEDNEDLKCQLQFVKEEAALMRKKMAKIDKEKDRFEHELqkyrsfygdld 568
Cdd:COG1196 289 EE---------YELLAELARLEQ--DIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEEL----------- 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 569 splpkgeaggppstreAELKLRLRLVEEEANILGRKIVELEVENRGLKAELDDLRGDDFNgsanpLMREQSESLSELRQH 648
Cdd:COG1196 347 ----------------EEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLE-----ALRAAAELAAQLEEL 405
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2182782248 649 LQLVEDETELLRRNVADLEEQNKRITAELNKYKYKSgghdSARHHDNAKTEALQEELKAARLQINELSGKVMQLQ 723
Cdd:COG1196 406 EEAEEALLERLERLEEELEELEEALAELEEEEEEEE----EALEEAAEEEAELEEEEEALLELLAELLEEAALLE 476
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
365-735 |
9.29e-05 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 46.35 E-value: 9.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 365 TLKNEIDELRTEMDEmRDTFFEEDACQLQEMRHELERANKNCRILQYRLRKAERKRLRYAQTGEIDGELLRSLEQDLKVA 444
Cdd:pfam10174 342 ILQTEVDALRLRLEE-KESFLNKKTKQLQDLTEEKSTLAGEIRDLKDMLDVKERKINVLQKKIENLQEQLRDKDKQLAGL 420
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 445 KDVSVRLHHELENVEEKRTTTED---ENEKLRQQLIEveiakQALQNELEKMKELSLKRRGSKDLPK--SEKKAQQTPTE 519
Cdd:pfam10174 421 KERVKSLQTDSSNTDTALTTLEEalsEKERIIERLKE-----QREREDRERLEELESLKKENKDLKEkvSALQPELTEKE 495
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 520 EDNEDLKcqlqfvkEEAALMRKKMAKIDKEKDRFEHELQKYRSFYGDLDSPLPKGEAGGPPSTREAELKLRLRLVEEEan 599
Cdd:pfam10174 496 SSLIDLK-------EHASSLASSGLKKDSKLKSLEIAVEQKKEECSKLENQLKKAHNAEEAVRTNPEINDRIRLLEQE-- 566
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 600 ilgrkiVELEVENRG-LKAELDDLRGddfngsanpLMREqseslselrqhlqlVEDETELLRRNVADLEEQNKRITAELN 678
Cdd:pfam10174 567 ------VARYKEESGkAQAEVERLLG---------ILRE--------------VENEKNDKDKKIAELESLTLRQMKEQN 617
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2182782248 679 KYKYKsgghdsARHHDNAKTEALQEELKAARLQINELSGKVMQLQYENrvLMSNMQR 735
Cdd:pfam10174 618 KKVAN------IKHGQQEMKKKGAQLLEEARRREDNLADNSQQLQLEE--LMGALEK 666
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
358-714 |
1.01e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.17 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 358 KLREENETLKNEIDELRTEMDEMRDTF--FEEDACQLQEMRHELErankncriLQYRLRKAERKRLRyaQTGEIDGELLR 435
Cdd:TIGR04523 374 KLKKENQSYKQEIKNLESQINDLESKIqnQEKLNQQKDEQIKKLQ--------QEKELLEKEIERLK--ETIIKNNSEIK 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 436 SLEQDLKVAKDVsvrlhhelenVEEKRTTTEDENEKLRQQLIEVEIAKQALQNeleKMKELSLKRRGSKDLpksekKAQQ 515
Cdd:TIGR04523 444 DLTNQDSVKELI----------IKNLDNTRESLETQLKVLSRSINKIKQNLEQ---KQKELKSKEKELKKL-----NEEK 505
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 516 TPTEEDNEDLKCQLQFVKEEAALMRKKMAKIDKEKDRFEHELQKyrsfygdLDSPLPKgeaggppstreaelklrlRLVE 595
Cdd:TIGR04523 506 KELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNK-------DDFELKK------------------ENLE 560
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 596 EEANILGRKIVELEVENRGLKAElddlrgddfNGSANPLMREQSESLSELRQHLQLVEDETELLRRNVADLEEQNKRITA 675
Cdd:TIGR04523 561 KEIDEKNKEIEELKQTQKSLKKK---------QEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSS 631
|
330 340 350
....*....|....*....|....*....|....*....
gi 2182782248 676 ELNKYKYKSgghdsarhhdnaktEALQEELKAARLQINE 714
Cdd:TIGR04523 632 IIKNIKSKK--------------NKLKQEVKQIKETIKE 656
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
358-715 |
1.04e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 46.21 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 358 KLREENETLKNEIDELRTEMDEMRDTFFEEDAcQLQEMRHELERANKNCRILQYRLRKAERKRLRY--------AQTGEI 429
Cdd:TIGR02169 361 ELKEELEDLRAELEEVDKEFAETRDELKDYRE-KLEKLKREINELKRELDRLQEELQRLSEELADLnaaiagieAKINEL 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 430 DGEL------LRSLEQDLKVAKDVSVRLHHELENVEEKRTTTEDENEKLRQQLIEVEIAKQALQNELEKMK--ELSLKRR 501
Cdd:TIGR02169 440 EEEKedkaleIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRavEEVLKAS 519
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 502 GS------KDLPKSEKKAQ-----------QTPTEEDNEDLKCQLQFVKEEAA-----LMRKKMAKIDKEKD-------- 551
Cdd:TIGR02169 520 IQgvhgtvAQLGSVGERYAtaievaagnrlNNVVVEDDAVAKEAIELLKRRKAgratfLPLNKMRDERRDLSilsedgvi 599
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 552 -------RFEHELQ------------------------KYR--SFYGDLdspLPKGEAGGPPSTREAELKLRLRLVEEEA 598
Cdd:TIGR02169 600 gfavdlvEFDPKYEpafkyvfgdtlvvedieaarrlmgKYRmvTLEGEL---FEKSGAMTGGSRAPRGGILFSRSEPAEL 676
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 599 NILGRKIVELEVENRGLKAELDDLRGDDFngSANPLMREQSESLSELRQHLQLVEDETELLRRNVADLEEQNKRITAELN 678
Cdd:TIGR02169 677 QRLRERLEGLKRELSSLQSELRRIENRLD--ELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIE 754
|
410 420 430
....*....|....*....|....*....|....*..
gi 2182782248 679 KYKyksgghdSARHHDNAKTEALQEELKAARLQINEL 715
Cdd:TIGR02169 755 NVK-------SELKELEARIEELEEDLHKLEEALNDL 784
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
356-714 |
1.22e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.83 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 356 MEKLREENETLKNEIDELRTEMDEM------------------RDTFFEEDACQLQEMRHELERANKNCRILQYRLRK-- 415
Cdd:PRK03918 407 ISKITARIGELKKEIKELKKAIEELkkakgkcpvcgrelteehRKELLEEYTAELKRIEKELKEIEEKERKLRKELREle 486
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 416 ----AERKRLRYAQTgeidGELLRSLEQDLKVakdvsvrlhHELENVEEKrtttEDENEKLRQQLIEVEIAKQALQNELE 491
Cdd:PRK03918 487 kvlkKESELIKLKEL----AEQLKELEEKLKK---------YNLEELEKK----AEEYEKLKEKLIKLKGEIKSLKKELE 549
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 492 KMKELslkrrgskdlpKSEKKAqqtpteednedLKCQLQFVKEEAALMRKKMAKID-KEKDRFEHELQKYRSFYGDLDsp 570
Cdd:PRK03918 550 KLEEL-----------KKKLAE-----------LEKKLDELEEELAELLKELEELGfESVEELEERLKELEPFYNEYL-- 605
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 571 lpkgEAGGPPSTREAELKlRLRLVEEEANILGRKIVELEVENRGLKAELDDLRG----DDFNGSANpLMREQSESLSELR 646
Cdd:PRK03918 606 ----ELKDAEKELEREEK-ELKKLEEELDKAFEELAETEKRLEELRKELEELEKkyseEEYEELRE-EYLELSRELAGLR 679
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2182782248 647 QHLQLVEDETELLRRNVADLEEQNKritaELNKYKYKSGGHDSARhhdnAKTEALQEELKAARLQINE 714
Cdd:PRK03918 680 AELEELEKRREEIKKTLEKLKEELE----EREKAKKELEKLEKAL----ERVEELREKVKKYKALLKE 739
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
464-736 |
1.23e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.83 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 464 TTEDENEKLRQQLIEVEIAKQALQNELEKMKELSLKRRGSKDLPKSEkkaqqtpteednEDLKCQLQFVKEEAALMRKKM 543
Cdd:PRK03918 142 ESDESREKVVRQILGLDDYENAYKNLGEVIKEIKRRIERLEKFIKRT------------ENIEELIKEKEKELEEVLREI 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 544 AKIDKEKDRFEHELQKYRSFYGDLDSplpkgeaggppsTRE--AELKLRLRLVEEEANILGRKIVELEVENRGLKAELDD 621
Cdd:PRK03918 210 NEISSELPELREELEKLEKEVKELEE------------LKEeiEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEE 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 622 LRGddfNGSANPLMREQSESLSELRQHLQLVEDETELLRRNVADLEEQNKRITAELNKykyksgghdsaRHHDNAKTEAL 701
Cdd:PRK03918 278 LEE---KVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKE-----------LEEKEERLEEL 343
|
250 260 270
....*....|....*....|....*....|....*
gi 2182782248 702 QEELKAARLQINELSGKVMQLQyENRVLMSNMQRY 736
Cdd:PRK03918 344 KKKLKELEKRLEELEERHELYE-EAKAKKEELERL 377
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
367-681 |
1.64e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.90 E-value: 1.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 367 KNEIDELRtEMDEMRDTffeEDACQLQEMRHELERANKNCRILQyRLRKAERKRLR-----YAQTGEIDGELLRSLEQDL 441
Cdd:PTZ00121 1545 KKKADELK-KAEELKKA---EEKKKAEEAKKAEEDKNMALRKAE-EAKKAEEARIEevmklYEEEKKMKAEEAKKAEEAK 1619
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 442 KVAKdvsvrlhhELENVEEKRTTTEDENEKLRQQLIEVEIAKQAlqNELEKMKELSLKRRGSKDlpksEKKAQQTPTEED 521
Cdd:PTZ00121 1620 IKAE--------ELKKAEEEKKKVEQLKKKEAEEKKKAEELKKA--EEENKIKAAEEAKKAEED----KKKAEEAKKAEE 1685
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 522 NEDLKCQLQFVKEEAALMRKKMAKIDKEKDRFEHELQKYRSFYGDLDSPLPKGEAggpPSTREAElklRLRLVEEEANil 601
Cdd:PTZ00121 1686 DEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAE---EDKKKAE---EAKKDEEEKK-- 1757
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 602 grKIVELEVEnrglkaelDDLRGDDFNGSANPLMREQSESLSELRQhlQLVEDETELLRRNVADLEEQNKRITAELNKYK 681
Cdd:PTZ00121 1758 --KIAHLKKE--------EEKKAEEIRKEKEAVIEEELDEEDEKRR--MEVDKKIKDIFDNFANIIEGGKEGNLVINDSK 1825
|
|
| Golgin_A5 |
pfam09787 |
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining ... |
359-500 |
1.69e-04 |
|
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining Golgi structure. They stimulate the formation of Golgi stacks and ribbons, and are involved in intra-Golgi retrograde transport. Two main interactions have been characterized: one with RAB1A that has been activated by GTP-binding and another with isoform CASP of CUTL1.
Pssm-ID: 462900 [Multi-domain] Cd Length: 305 Bit Score: 44.75 E-value: 1.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 359 LREENETLKNEIDELRTEMDEMRDTFFEEdacqLQEMRHELERANKNCRILQYRLRKAERKRLRYAQTgeidgelLRSLE 438
Cdd:pfam09787 59 LREEIQKLRGQIQQLRTELQELEAQQQEE----AESSREQLQELEEQLATERSARREAEAELERLQEE-------LRYLE 127
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2182782248 439 QDLKVAKDVSVRLHHELENVEEK----------RTTTEDENEKLRQQLIEVEIAKQALQNELEKMKE---LSLKR 500
Cdd:pfam09787 128 EELRRSKATLQSRIKDREAEIEKlrnqltsksqSSSSQSELENRLHQLTETLIQKQTMLEALSTEKNslvLQLER 202
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
359-562 |
1.70e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 45.48 E-value: 1.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 359 LREENETLKNEIDELRTEMDEMRDtffeedacqlqEMRHELERANKNCRILQYRLRKAERKRLRYAQTG-------EIDG 431
Cdd:pfam05483 539 LEEKEMNLRDELESVREEFIQKGD-----------EVKCKLDKSEENARSIEYEVLKKEKQMKILENKCnnlkkqiENKN 607
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 432 ELLRSLEQDLKVAKDVSVRLHHELENVEEKRTTTEDENEKLRQQLIEVEIAKQalqnelekmKELSLKRRGSKDLPKSEK 511
Cdd:pfam05483 608 KNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQ---------KEIEDKKISEEKLLEEVE 678
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2182782248 512 KAQQTPTE----EDNEDLKCQLQfVKEEAALMRKKMAKIDKEKDRFEHELQKYRS 562
Cdd:pfam05483 679 KAKAIADEavklQKEIDKRCQHK-IAEMVALMEKHKHQYDKIIEERDSELGLYKN 732
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
358-672 |
3.31e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 44.83 E-value: 3.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 358 KLREENETLKNEIDELRTEMDEMRDTFFEEDACQLQEMRHELERANKNCRI-LQYRLRKAERKRLRYAQTGEIDGellrs 436
Cdd:pfam12128 238 KIRPEFTKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELnQLLRTLDDQWKEKRDELNGELSA----- 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 437 leQDLKVAKDvsvrlHHELENVEEKRTTTEDENeklrqqlieVEIAKQALQNELEKMKELSLKRRGSKDLPKSEKKAQQ- 515
Cdd:pfam12128 313 --ADAAVAKD-----RSELEALEDQHGAFLDAD---------IETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAk 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 516 TPTEEDNEDLKCqlqfvKEEAALMRKKMAKIDKEKDRfehELQKYRSFYGDLDSPLPKGEAGGPPSTREAELKLRLRLVE 595
Cdd:pfam12128 377 YNRRRSKIKEQN-----NRDIAGIKDKLAKIREARDR---QLAVAEDDLQALESELREQLEAGKLEFNEEEYRLKSRLGE 448
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2182782248 596 EEANILGRKIVELEVENRGLKAELDDlRGDDFNGSANplmREQSESLSELRQHLQLVEDETELLRRNVADLEEQNKR 672
Cdd:pfam12128 449 LKLRLNQATATPELLLQLENFDERIE-RAREEQEAAN---AEVERLQSELRQARKRRDQASEALRQASRRLEERQSA 521
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
360-677 |
3.91e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 44.26 E-value: 3.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 360 REENETLKNEIDELRTEMDEMRDTF------FEEDACQLQEMRHELERANKNCRILQYRLRKAeRKRLRYAQtgeidgEL 433
Cdd:PRK02224 376 REAVEDRREEIEELEEEIEELRERFgdapvdLGNAEDFLEELREERDELREREAELEATLRTA-RERVEEAE------AL 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 434 LRS-----LEQDLKVAKDVSVrlhheLENVEEKRTTTEDENEKLRQQLIEVEIAKQALQNELEKMKELSLKRRGSKDLpk 508
Cdd:PRK02224 449 LEAgkcpeCGQPVEGSPHVET-----IEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERREDL-- 521
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 509 SEKKAQQTPTEEDNEDlkcQLQFVKEEAALMRKKMAKIDKEKDRFEHELQKYRSFYGDLDSPLPKGEaggppSTREAELK 588
Cdd:PRK02224 522 EELIAERRETIEEKRE---RAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELK-----ERIESLER 593
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 589 LRLRLVEEEAniLGRKIVELEvENRGLKAELDDLRGDDfngsanplMREQSESLSELRQHLQlvEDETELLRRNVADLEE 668
Cdd:PRK02224 594 IRTLLAAIAD--AEDEIERLR-EKREALAELNDERRER--------LAEKRERKRELEAEFD--EARIEEAREDKERAEE 660
|
....*....
gi 2182782248 669 QNKRITAEL 677
Cdd:PRK02224 661 YLEQVEEKL 669
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
358-727 |
5.75e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 43.90 E-value: 5.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 358 KLREENETlKNEIDELRtemDEMRDTFFEEDACQLQEMRHELERankncrilqyrlrkaerkrlryaqtgeIDGElLRSL 437
Cdd:TIGR02169 202 RLRREREK-AERYQALL---KEKREYEGYELLKEKEALERQKEA---------------------------IERQ-LASL 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 438 EQDLkvaKDVSVRLHHELENVEEKRTTTEDENEKLRqQLIEVEIAkqALQNELEKMK-ELSLKRRGSKdlpksEKKAQQT 516
Cdd:TIGR02169 250 EEEL---EKLTEEISELEKRLEEIEQLLEELNKKIK-DLGEEEQL--RVKEKIGELEaEIASLERSIA-----EKERELE 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 517 PTEEDNEDLKCQLQFVKEEAALMRKKMAKIDKEKDRFEHELQKYRSFYGDLDSPLpkgeagGPPSTREAELKLRLRLVEE 596
Cdd:TIGR02169 319 DAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAEL------EEVDKEFAETRDELKDYRE 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 597 EANILGRKIVELEVENRGLKAELDDLRGDdfngsanplMREQSESLSELRQHLQLVEDETELLRRNVADLEEQNKRITAE 676
Cdd:TIGR02169 393 KLEKLKREINELKRELDRLQEELQRLSEE---------LADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAAD 463
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 2182782248 677 LNKYKYKsgghdsaRHHDNAKTEALQEELKAARLQINELSGKVMQLQYENR 727
Cdd:TIGR02169 464 LSKYEQE-------LYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVR 507
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
361-655 |
2.00e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 361 EENETLKnEIDELRTEMDEMRDTffEEDACQLQEMRHELERANKNC-RILQYRLRKAERKRLRYAQTGEIDGELLRSLEQ 439
Cdd:COG4913 219 EEPDTFE-AADALVEHFDDLERA--HEALEDAREQIELLEPIRELAeRYAAARERLAELEYLRAALRLWFAQRRLELLEA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 440 DLkvakdvsVRLHHELENVEEKRTTTEDENEKLRQQLIEVEiaKQALQNELEKMKELslkrrgskdlpksekkaqqtptE 519
Cdd:COG4913 296 EL-------EELRAELARLEAELERLEARLDALREELDELE--AQIRGNGGDRLEQL----------------------E 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 520 EDNEDLKcqlqfvkeeaalmrkkmakidKEKDRFEHELQKYRSFYGDLDSPLPKGEAG-----GPPSTREAELKLRLRLV 594
Cdd:COG4913 345 REIERLE---------------------RELEERERRRARLEALLAALGLPLPASAEEfaalrAEAAALLEALEEELEAL 403
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2182782248 595 EEEANILGRKIVELEVENRGLKAELDDLRGddfNGSANPlmREQSESLSELRQHLQLVEDE 655
Cdd:COG4913 404 EEALAEAEAALRDLRRELRELEAEIASLER---RKSNIP--ARLLALRDALAEALGLDEAE 459
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
359-661 |
2.56e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.68 E-value: 2.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 359 LREENETLKNEIDELRTEMDEMRDTFFEEDACQLQEMRHELERANKNCRILQYRLRKAE------RKRLRYAQTGEIDGE 432
Cdd:COG4717 161 LEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQeeleelEEELEQLENELEAAA 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 433 LLRSLEQDLKVAKDVSVRLHHELENVE---------------------------EKRTTTEDENEKLRQQLIEVEIAKQA 485
Cdd:COG4717 241 LEERLKEARLLLLIAAALLALLGLGGSllsliltiagvlflvlgllallflllaREKASLGKEAEELQALPALEELEEEE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 486 LQNELEK-MKELSLKRRGSKDLPKSEKKAQQTPTE--EDNEDLKCQlQFVKEEAALM-------RKKMAKIDKEKDRFEH 555
Cdd:COG4717 321 LEELLAAlGLPPDLSPEELLELLDRIEELQELLREaeELEEELQLE-ELEQEIAALLaeagvedEEELRAALEQAEEYQE 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 556 ELQKYRSFYGDLDSpLPKGEAGGPPSTREAELKLRLRLVEEEANILGRKIVELEVENRGLKAELDDLrgddfngsanplm 635
Cdd:COG4717 400 LKEELEELEEQLEE-LLGELEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQL------------- 465
|
330 340
....*....|....*....|....*..
gi 2182782248 636 rEQSESLSELRQHLQLVEDE-TELLRR 661
Cdd:COG4717 466 -EEDGELAELLQELEELKAElRELAEE 491
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
358-500 |
3.11e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.29 E-value: 3.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 358 KLREENETLKNEIDELRTEMDEMRDTFfEEDACQLQEMRHELERANKNCRILQYRLRKAERK-------RLRYAQTGEID 430
Cdd:COG1579 21 RLEHRLKELPAELAELEDELAALEARL-EAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQlgnvrnnKEYEALQKEIE 99
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2182782248 431 gellrSLEQDLKVAKDVSVRLHHELENVEEKRTTTEDENEKLRQQLIEVEIAKQALQNELEK-MKELSLKR 500
Cdd:COG1579 100 -----SLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAeLEELEAER 165
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
391-722 |
3.51e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.29 E-value: 3.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 391 QLQEMRHELERANKNCRILQYRLRKAERKRLRYAQTGEIDGELLRSLEQDLKVAkdvsvRLHHELENVEEKRTTTEDENE 470
Cdd:COG4717 75 ELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLL-----PLYQELEALEAELAELPERLE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 471 KLRQQLIEVEIAKQALQNELEKMKELSLKRRGSKDLPKSEKKAQQTPTEEDNEDLKCQLQFVKEEAALMRKKMAKIDKEK 550
Cdd:COG4717 150 ELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEEL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 551 DRFE---------HELQKYRSFYGDLDSPL----PKGEAGGPPSTREAELKLRLRLVEEEANILGRKIVEL--EVENRGL 615
Cdd:COG4717 230 EQLEneleaaaleERLKEARLLLLIAAALLallgLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLgkEAEELQA 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 616 KAELDDLRGDDFNGSANPLMREQSESLSELRQHLQLVEDETELLRR-----NVADLEEQNKRITAELNKYKYKSGGHDSA 690
Cdd:COG4717 310 LPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREaeeleEELQLEELEQEIAALLAEAGVEDEEELRA 389
|
330 340 350
....*....|....*....|....*....|..
gi 2182782248 691 RHHDNAKTEALQEELKAARLQINELSGKVMQL 722
Cdd:COG4717 390 ALEQAEEYQELKEELEELEEQLEELLGELEEL 421
|
|
| HMMR_N |
pfam15905 |
Hyaluronan mediated motility receptor N-terminal; HMMR_N is the N-terminal region of ... |
360-474 |
3.55e-03 |
|
Hyaluronan mediated motility receptor N-terminal; HMMR_N is the N-terminal region of eukaryotic hyaluronan-mediated motility receptor proteins. The protein is functionally associated with BRCA1 and thus predicted to be a common, low-penetrance breast cancer candidate.
Pssm-ID: 464932 [Multi-domain] Cd Length: 329 Bit Score: 40.56 E-value: 3.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 360 REENETLKNEIDELRTEMDEMRDtfFEEDACQLQEMrheLERANKNCRILQYRLRkaERKRLRYAQTGEIDG---ELLRS 436
Cdd:pfam15905 218 KSETEKLLEYITELSCVSEQVEK--YKLDIAQLEEL---LKEKNDEIESLKQSLE--EKEQELSKQIKDLNEkckLLESE 290
|
90 100 110
....*....|....*....|....*....|....*...
gi 2182782248 437 LEQDLKVAKDVSVRLHHELENVEEKRTTTEDENEKLRQ 474
Cdd:pfam15905 291 KEELLREYEEKEQTLNAELEELKEKLTLEEQEHQKLQQ 328
|
|
| HAP1_N |
pfam04849 |
HAP1 N-terminal conserved region; This family represents an N-terminal conserved region found ... |
491-723 |
3.65e-03 |
|
HAP1 N-terminal conserved region; This family represents an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologs. HAP1 binds to huntingtin in a polyglutamine repeat-length-dependent manner. However, its possible role in the pathogenesis of Huntington's disease is unclear. This family also includes a similar N-terminal conserved region from hypothetical protein products of ALS2CR3 genes found in the human juvenile amyotrophic lateral sclerosis critical region 2q33-2q34.
Pssm-ID: 461455 [Multi-domain] Cd Length: 309 Bit Score: 40.39 E-value: 3.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 491 EKMKELSLKRRGSKDLPKsekkaQQTPTEEDNEDLKCQLQFVKEEAALMRkkmakidkekdrfeHELQKYR---SFYGDL 567
Cdd:pfam04849 77 EKERDLELAARIGQSLLK-----QNSVLTERNEALEEQLGSAREEILQLR--------------HELSKKDdllQIYSND 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 568 DSPLPKGEAGGPPSTREAELKLRLRLVEEEAniLGRKIVELEVENRGLKAELDDLR--GDDFNGSANPLMREQSESLSEL 645
Cdd:pfam04849 138 AEESETESSCSTPLRRNESFSSLHGCVQLDA--LQEKLRGLEEENLKLRSEASHLKteTDTYEEKEQQLMSDCVEQLSEA 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 646 RQhlQLVEDETELLRRNvADLEEQNKRIT---AELNKYKYKSGGHdsarhhdNAKTEALQEELKAARLQINELSGKVMQL 722
Cdd:pfam04849 216 NQ--QMAELSEELARKM-EENLRQQEEITsllAQIVDLQHKCKEL-------GIENEELQQHLQASKEAQRQLTSELQEL 285
|
.
gi 2182782248 723 Q 723
Cdd:pfam04849 286 Q 286
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
361-627 |
4.20e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.66 E-value: 4.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 361 EENETLKNEIDELRTEMDEMRDtffeedacQLQEMRHELERANKNCRILQYRLRKAERKrLRYAQtgeidgELLRSLEQD 440
Cdd:COG4372 38 FELDKLQEELEQLREELEQARE--------ELEQLEEELEQARSELEQLEEELEELNEQ-LQAAQ------AELAQAQEE 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 441 LKVAKDVSVRLHHELENVEEKRTTTEDENEKLRQQLIEVEIAKQALQNELEKMK-ELSLKRRGSKDLPKSEKKAQQTPTE 519
Cdd:COG4372 103 LESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEeQLESLQEELAALEQELQALSEAEAE 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 520 EDNEDLKCQLQFVKEEAALMRKKMAKIDKEKDRFEHELQKYRSFYGDLDSPLPKGEAGGPPSTREAELKLRLRLVEEEAN 599
Cdd:COG4372 183 QALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEE 262
|
250 260
....*....|....*....|....*...
gi 2182782248 600 ILGRKIVELEVENRGLKAELDDLRGDDF 627
Cdd:COG4372 263 LELAILVEKDTEEEELEIAALELEALEE 290
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
360-718 |
4.33e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.09 E-value: 4.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 360 REENETLKNEIDELRTEMDEMRDTFFEEDAcQLQEMRHELERANKNCRILQYRLRKAE----RKRLRYAQTGEIDG--EL 433
Cdd:COG3096 277 ANERRELSERALELRRELFGARRQLAEEQY-RLVEMARELEELSARESDLEQDYQAASdhlnLVQTALRQQEKIERyqED 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 434 LRSLEQDLKVAKDVSVRLHHELENVEEKRTTTEDENEKLRQQLIEVEIA-----------KQALQnELEKMKELSlkrrg 502
Cdd:COG3096 356 LEELTERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQAldvqqtraiqyQQAVQ-ALEKARALC----- 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 503 skDLPKSEKKAqqtpTEEDNEDLKCQLQFVKEEAALMRKKMAKIDKEKDRFEHELQKYRSFYGdldsPLPKGEAGGppST 582
Cdd:COG3096 430 --GLPDLTPEN----AEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKIAG----EVERSQAWQ--TA 497
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 583 REAelklrLRLVEEEANILGRKivelevenRGLKAELDDLRgddfngsanPLMREQSES---LSELRQHLQLVEDETELL 659
Cdd:COG3096 498 REL-----LRRYRSQQALAQRL--------QQLRAQLAELE---------QRLRQQQNAerlLEEFCQRIGQQLDAAEEL 555
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2182782248 660 RRNVADLEEQNKRITAELNKykyksgghdsarhhDNAKTEALQEELKAARLQINELSGK 718
Cdd:COG3096 556 EELLAELEAQLEELEEQAAE--------------AVEQRSELRQQLEQLRARIKELAAR 600
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
468-727 |
4.61e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 40.86 E-value: 4.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 468 ENEKLRQQLIEVEIAKQALQNEL-EKMKELSLKRRGSKDLPKSEKKAQQTPTEE--DNEDLKCQLQFVKEEAALMRKKMA 544
Cdd:pfam05483 86 EAEKIKKWKVSIEAELKQKENKLqENRKIIEAQRKAIQELQFENEKVSLKLEEEiqENKDLIKENNATRHLCNLLKETCA 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 545 KIDKEKDRFEHELQKYRSFYGDLDSPLPKGEAGGPPSTREAE---LKLRLRLVEEEANILG-RKIVELEVENRGLKAELD 620
Cdd:pfam05483 166 RSAEKTKKYEYEREETRQVYMDLNNNIEKMILAFEELRVQAEnarLEMHFKLKEDHEKIQHlEEEYKKEINDKEKQVSLL 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 621 DLRGDDFNGSanplMREQSESLSELRQHLQLVEDETELLRRNVADLEEQNKRITAELNKYKYksgghdsARHHDNAKTEA 700
Cdd:pfam05483 246 LIQITEKENK----MKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKM-------SLQRSMSTQKA 314
|
250 260
....*....|....*....|....*...
gi 2182782248 701 LQEELKAARLQINELS-GKVMQLQYENR 727
Cdd:pfam05483 315 LEEDLQIATKTICQLTeEKEAQMEELNK 342
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
358-684 |
4.66e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.27 E-value: 4.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 358 KLREENETLKNEIDELRTEMDEMRDTFFEEDAcQLQEMRHELERANKNCRILQYRLRKAERKRLRYAQTgeidgelLRSL 437
Cdd:COG4372 49 QLREELEQAREELEQLEEELEQARSELEQLEE-ELEELNEQLQAAQAELAQAQEELESLQEEAEELQEE-------LEEL 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 438 EQDLKVAKDVSVRLHHELENVEEKRTTTEDENEKLRQQLIEVEIAKQALQNELEKMKELSLKRRGSKDLPKSEKKAQQTP 517
Cdd:COG4372 121 QKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELLKEANRNAEKEE 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 518 TEEDNEDLKCQLQFVKEEAALMRKKMAKIdkEKDRFEHELQKYRSFYGDLDSPLPKGEAGGPpsTREAELKLRLRLVEEE 597
Cdd:COG4372 201 ELAEAEKLIESLPRELAEELLEAKDSLEA--KLGLALSALLDALELEEDKEELLEEVILKEI--EELELAILVEKDTEEE 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 598 ANILGRKIVELEVENRGLKAELDDLRGDDFNGSANPLMREQSESLSELRQHLQLVEDETELLRRNVADLEEQNKRITAEL 677
Cdd:COG4372 277 ELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLVGLLDNDVL 356
|
....*..
gi 2182782248 678 NKYKYKS 684
Cdd:COG4372 357 ELLSKGA 363
|
|
| EzrA |
COG4477 |
Septation ring formation regulator EzrA [Cell cycle control, cell division, chromosome ... |
359-561 |
6.04e-03 |
|
Septation ring formation regulator EzrA [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443574 [Multi-domain] Cd Length: 567 Bit Score: 40.21 E-value: 6.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 359 LREENETLKNEIDELRTEMDEMRDT--FFEEDAC--QLQEMRHELERANKNcrILQYRLRKAErKRLRYAQTgEIDgELL 434
Cdd:COG4477 220 LKELQTELPDQLEELKSGYREMKEQgyVLEHLNIekEIEQLEEQLKEALEL--LEELDLDEAE-EELEEIEE-EID-ELY 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 435 RSLEQDLKVAKDVsvrlHHELENVEEKRTTTEDENEKLRqqlIEVEIAKQALQ---NELEKMKEL-----SLKRRGSKDL 506
Cdd:COG4477 295 DLLEKEVEAKKYV----DKNQEELEEYLEHLKEQNRELK---EEIDRVQQSYRlneNELEKVRNLekqieELEKRYDEID 367
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 2182782248 507 PK-SEKKAQQTPTEEDNEDLKCQLQFVKEEAALMRKKMAKIDKEKDRFEHELQKYR 561
Cdd:COG4477 368 ERiEEEKVAYSELQEELEEIEEQLEEIEEEQEEFSEKLKSLRKDELEAREKLDELK 423
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
520-715 |
7.08e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 39.75 E-value: 7.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 520 EDNEDLKCQLQFVKEEAALMRKKMAKIDKEKDRFEHELQKYRSFYGDLdsplpkgeaggppSTREAELKLRLRLVEEEAN 599
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAAL-------------ARRIRALEQELAALEAELA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 600 ILGRKIVELEVENRGLKAELDD-----------------LRGDDFNGSANPLM-------------REQSESLSELRQHL 649
Cdd:COG4942 87 ELEKEIAELRAELEAQKEELAEllralyrlgrqpplallLSPEDFLDAVRRLQylkylaparreqaEELRADLAELAALR 166
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2182782248 650 QLVEDETELLRRNVADLEEQNKRITAELNKYKYKSGGHDSARHHDNAKTEALQEELKAARLQINEL 715
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARL 232
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
360-774 |
7.41e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 40.02 E-value: 7.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 360 REENETLKNEIDELR---TEMDEMRDTFFEEdacqlqemrhelerankncrilqYRLRKAERKRLRYAQTGEIDGELLRS 436
Cdd:PRK02224 250 REELETLEAEIEDLRetiAETEREREELAEE-----------------------VRDLRERLEELEEERDDLLAEAGLDD 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 437 LEQdlkvakdvsvrlhhelENVEEKRTTTEDENEKLRQQLIEVEIAKQALQNELEKMKELSLKRRGSKDLPKSEKK---A 513
Cdd:PRK02224 307 ADA----------------EAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAeleS 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 514 QQTPTEEDNEDLKCQLQFVKEEAALMRKKMAKIDKEKDRFEHELQKYRSfygdldsplPKGEAGGPPSTREAELK-LRLR 592
Cdd:PRK02224 371 ELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELRE---------ERDELREREAELEATLRtARER 441
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 593 LVEEEA------------NILGRKIVELEVENRG----LKAELDDLRgDDFNGSANPLmrEQSESLSELRQHLQLVEDET 656
Cdd:PRK02224 442 VEEAEAlleagkcpecgqPVEGSPHVETIEEDRErveeLEAELEDLE-EEVEEVEERL--ERAEDLVEAEDRIERLEERR 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 657 ELLRRNVAD----LEEQNKRItAELNKYKyksGGHDSARHHDNAKTEALQEELKAARLQINELSGKVMQLQYE----NRV 728
Cdd:PRK02224 519 EDLEELIAErretIEEKRERA-EELRERA---AELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERieslERI 594
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 2182782248 729 LMSNMQRYDLASHLGIRGSPRDSDAESDAGKKESDDDSRppHRKRE 774
Cdd:PRK02224 595 RTLLAAIADAEDEIERLREKREALAELNDERRERLAEKR--ERKRE 638
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
392-681 |
9.17e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 39.94 E-value: 9.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 392 LQEMRHELERANKNCRILQYRLRKAeRKRLRYAQTGEIDGEL-------LRSLEQDLKVAKDVSVRLHHELENVEEKRTT 464
Cdd:PRK04863 309 LVEMARELAELNEAESDLEQDYQAA-SDHLNLVQTALRQQEKieryqadLEELEERLEEQNEVVEEADEQQEENEARAEA 387
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 465 TEDENEKLRQQLIEVEIA-----KQALQ-----NELEKMKELSlkrrGSKDLPKSEKKAQQtpteednEDLKCQLQFVKE 534
Cdd:PRK04863 388 AEEEVDELKSQLADYQQAldvqqTRAIQyqqavQALERAKQLC----GLPDLTADNAEDWL-------EEFQAKEQEATE 456
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2182782248 535 EAALMRKKMAKIDKEKDRFEHELQKYRSFYGDLDSPLPKGEAggppstREAELKLR-LRLVEEEANILGRKIVELEVENR 613
Cdd:PRK04863 457 ELLSLEQKLSVAQAAHSQFEQAYQLVRKIAGEVSRSEAWDVA------RELLRRLReQRHLAEQLQQLRMRLSELEQRLR 530
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2182782248 614 gLKAELDDLRgDDFNG--SANPLMREQSESL-SELRQHLQLVEDETELLRRNVADLEEQNKRITAELNKYK 681
Cdd:PRK04863 531 -QQQRAERLL-AEFCKrlGKNLDDEDELEQLqEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLA 599
|
|
| |
