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Conserved domains on  [gi|6320662|ref|NP_010742|]
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guanylate kinase [Saccharomyces cerevisiae S288C]

Protein Classification

guanylate kinase( domain architecture ID 10799078)

guanylate kinase (GMP kinase) catalyzes the transfer of a phosphate group from ATP to guanosine monophosphate (GMP) to form guanosine diphosphate (GDP) and ADP

EC:  2.7.4.8
Gene Ontology:  GO:0004385|GO:0006163|GO:0005524

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
guanyl_kin TIGR03263
guanylate kinase; Members of this family are the enzyme guanylate kinase, also called GMP ...
 3-185 1.43e-99

guanylate kinase; Members of this family are the enzyme guanylate kinase, also called GMP kinase. This enzyme transfers a phosphate from ATP to GMP, yielding ADP and GDP. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions]


:

Pssm-ID: 213788  Cd Length: 179  Bit Score: 285.16  E-value: 1.43e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662      3 RPIVISGPSGTGKSTLLKKLFAEYPDsFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGST 82
Cdd:TIGR03263   1 LLIVISGPSGAGKSTLVKALLEEDPN-LKFSISATTRKPRPGEVDGVDYFFVSKEEFEEMIKAGEFLEWAEVHGNYYGTP 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662     83 VASVKQVSKSGKTCILDIDMQGVKSVKAIPeLNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAETga 162
Cdd:TIGR03263  80 KSPVEEALAAGKDVLLEIDVQGARQVKKKF-PDAVSIFILPPSLEELERRLRKRGTDSEEVIERRLAKAKKEIAHADE-- 156

                         170       180
                  ....*....|....*....|...
gi 6320662    163 HDKVIVNDDLDKAYKELKDFIFA 185
Cdd:TIGR03263 157 FDYVIVNDDLEKAVEELKSIILA 179
 
Name Accession Description Interval E-value
guanyl_kin TIGR03263
guanylate kinase; Members of this family are the enzyme guanylate kinase, also called GMP ...
 3-185 1.43e-99

guanylate kinase; Members of this family are the enzyme guanylate kinase, also called GMP kinase. This enzyme transfers a phosphate from ATP to GMP, yielding ADP and GDP. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions]


Pssm-ID: 213788  Cd Length: 179  Bit Score: 285.16  E-value: 1.43e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662      3 RPIVISGPSGTGKSTLLKKLFAEYPDsFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGST 82
Cdd:TIGR03263   1 LLIVISGPSGAGKSTLVKALLEEDPN-LKFSISATTRKPRPGEVDGVDYFFVSKEEFEEMIKAGEFLEWAEVHGNYYGTP 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662     83 VASVKQVSKSGKTCILDIDMQGVKSVKAIPeLNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAETga 162
Cdd:TIGR03263  80 KSPVEEALAAGKDVLLEIDVQGARQVKKKF-PDAVSIFILPPSLEELERRLRKRGTDSEEVIERRLAKAKKEIAHADE-- 156

                         170       180
                  ....*....|....*....|...
gi 6320662    163 HDKVIVNDDLDKAYKELKDFIFA 185
Cdd:TIGR03263 157 FDYVIVNDDLEKAVEELKSIILA 179
Guanylate_kin pfam00625
Guanylate kinase;
1-186 1.79e-93

Guanylate kinase;


Pssm-ID: 395500  Cd Length: 182  Bit Score: 269.64  E-value: 1.79e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662      1 MSRPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYG 80
Cdd:pfam00625   1 SRRPVVLSGPSGVGKSHIKKALLSEYPDKFGYSVPHTTRPPRKGEVDGKDYYFVSKEEMERDISANEFLEYAQFSGNMYG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662     81 STVASVKQVSKSGKTCILDIDMQGVKSVKAIpELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAEt 160
Cdd:pfam00625  81 TSVETIEQIHEQGKIVILDVDPQGVKQLRKA-ELSPISVFIKPPSLKVLQRRLKGRGKEQEEKINKRMAAAEQEFQHYE- 158

                         170       180
                  ....*....|....*....|....*.
gi 6320662    161 gaHDKVIVNDDLDKAYKELKDFIFAE 186
Cdd:pfam00625 159 --FDVIIVNDDLEEAYKKLKEALEAE 182
Gmk COG0194
Guanylate kinase [Nucleotide transport and metabolism];
5-187 1.07e-90

Guanylate kinase [Nucleotide transport and metabolism];


Pssm-ID: 439964  Cd Length: 190  Bit Score: 263.08  E-value: 1.07e-90
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662    5 IVISGPSGTGKSTLLKKLFAEYPDsFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTVA 84
Cdd:COG0194   5 IVLSGPSGAGKTTLVKALLERDPD-LRFSVSATTRPPRPGEVDGVDYHFVSREEFERMIENGEFLEWAEVHGNYYGTPKA 83

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662   85 SVKQVSKSGKTCILDIDMQGVKSVK-AIPElnARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAetGAH 163
Cdd:COG0194  84 EVEEALAAGKDVLLEIDVQGARQVKkKFPD--AVSIFILPPSLEELERRLRGRGTDSEEVIERRLAKAREELAHA--DEF 159

                       170       180
                ....*....|....*....|....
gi 6320662  164 DKVIVNDDLDKAYKELKDFIFAEK 187
Cdd:COG0194 160 DYVVVNDDLDRAVEELKAIIRAER 183
gmk PRK00300
guanylate kinase; Provisional
 5-187 9.90e-88

guanylate kinase; Provisional


Pssm-ID: 234719  Cd Length: 205  Bit Score: 256.17  E-value: 9.90e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662     5 IVISGPSGTGKSTLLKKLFAEyPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTVA 84
Cdd:PRK00300   8 IVLSGPSGAGKSTLVKALLER-DPNLQLSVSATTRAPRPGEVDGVDYFFVSKEEFEEMIENGEFLEWAEVFGNYYGTPRS 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662    85 SVKQVSKSGKTCILDIDMQGVKSVK-AIPElnARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAetGAH 163
Cdd:PRK00300  87 PVEEALAAGKDVLLEIDWQGARQVKkKMPD--AVSIFILPPSLEELERRLRGRGTDSEEVIARRLAKAREEIAHA--SEY 162

                        170       180
                 ....*....|....*....|....
gi 6320662   164 DKVIVNDDLDKAYKELKDFIFAEK 187
Cdd:PRK00300 163 DYVIVNDDLDTALEELKAIIRAER 186
GuKc smart00072
Guanylate kinase homologues; Active enzymes catalyze ATP-dependent phosphorylation of GMP to ...
 11-187 4.01e-79

Guanylate kinase homologues; Active enzymes catalyze ATP-dependent phosphorylation of GMP to GDP. Structure resembles that of adenylate kinase. So-called membrane-associated guanylate kinase homologues (MAGUKs) do not possess guanylate kinase activities; instead at least some possess protein-binding functions.


Pssm-ID: 214504 [Multi-domain]  Cd Length: 174  Bit Score: 233.34  E-value: 4.01e-79
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662      11 SGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTVASVKQVS 90
Cdd:smart00072   1 SGVGKGTLLAELIQEIPDAFERVVSHTTRPPRPGEVNGVDYHFVSKEEFEDDIKSGLFLEWGEYEGNYYGTSKETIRQVA 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662      91 KSGKTCILDIDMQGVKSVKAiPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAElaYAETGAHDKVIVND 170
Cdd:smart00072  81 EKGKHCLLDIDPQGVKQLRK-AQLYPIVIFIAPPSSEELERRLRQRGTETSERIQKRLAAAQKE--AQEYHLFDYVIVND 157

                          170
                   ....*....|....*..
gi 6320662     171 DLDKAYKELKDFIFAEK 187
Cdd:smart00072 158 DLEDAYEELKEILEAEQ 174
GMPK cd00071
Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), ...
 4-180 1.69e-72

Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to guanosine monophosphate (GMP) to yield adenosine diphosphate (ADP) and guanosine diphosphate (GDP). It plays an essential role in the biosynthesis of guanosine triphosphate (GTP). This enzyme is also important for the activation of some antiviral and anticancer agents, such as acyclovir, ganciclovir, carbovir, and thiopurines.


Pssm-ID: 238026  Cd Length: 137  Bit Score: 215.09  E-value: 1.69e-72
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662    4 PIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTV 83
Cdd:cd00071   1 LIVLSGPSGVGKSTLLKRLLEEFDPNFGFSVSHTTRKPRPGEVDGVDYHFVSKEEFERLIENGEFLEWAEFHGNYYGTSK 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662   84 ASVKQVSKSGKTCILDIDMQGVKSVKAiPELNARFLFIAPPsvedlkkrlegrgteteesinkrlsaaqaelayaetgah 163
Cdd:cd00071  81 AAVEEALAEGKIVILEIDVQGARQVKK-SYPDAVSIFILPP--------------------------------------- 120

                       170
                ....*....|....*..
gi 6320662  164 DKVIVNDDLDKAYKELK 180
Cdd:cd00071 121 DYVIVNDDLEKAYEELK 137
 
Name Accession Description Interval E-value
guanyl_kin TIGR03263
guanylate kinase; Members of this family are the enzyme guanylate kinase, also called GMP ...
 3-185 1.43e-99

guanylate kinase; Members of this family are the enzyme guanylate kinase, also called GMP kinase. This enzyme transfers a phosphate from ATP to GMP, yielding ADP and GDP. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions]


Pssm-ID: 213788  Cd Length: 179  Bit Score: 285.16  E-value: 1.43e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662      3 RPIVISGPSGTGKSTLLKKLFAEYPDsFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGST 82
Cdd:TIGR03263   1 LLIVISGPSGAGKSTLVKALLEEDPN-LKFSISATTRKPRPGEVDGVDYFFVSKEEFEEMIKAGEFLEWAEVHGNYYGTP 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662     83 VASVKQVSKSGKTCILDIDMQGVKSVKAIPeLNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAETga 162
Cdd:TIGR03263  80 KSPVEEALAAGKDVLLEIDVQGARQVKKKF-PDAVSIFILPPSLEELERRLRKRGTDSEEVIERRLAKAKKEIAHADE-- 156

                         170       180
                  ....*....|....*....|...
gi 6320662    163 HDKVIVNDDLDKAYKELKDFIFA 185
Cdd:TIGR03263 157 FDYVIVNDDLEKAVEELKSIILA 179
Guanylate_kin pfam00625
Guanylate kinase;
1-186 1.79e-93

Guanylate kinase;


Pssm-ID: 395500  Cd Length: 182  Bit Score: 269.64  E-value: 1.79e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662      1 MSRPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYG 80
Cdd:pfam00625   1 SRRPVVLSGPSGVGKSHIKKALLSEYPDKFGYSVPHTTRPPRKGEVDGKDYYFVSKEEMERDISANEFLEYAQFSGNMYG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662     81 STVASVKQVSKSGKTCILDIDMQGVKSVKAIpELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAEt 160
Cdd:pfam00625  81 TSVETIEQIHEQGKIVILDVDPQGVKQLRKA-ELSPISVFIKPPSLKVLQRRLKGRGKEQEEKINKRMAAAEQEFQHYE- 158

                         170       180
                  ....*....|....*....|....*.
gi 6320662    161 gaHDKVIVNDDLDKAYKELKDFIFAE 186
Cdd:pfam00625 159 --FDVIIVNDDLEEAYKKLKEALEAE 182
Gmk COG0194
Guanylate kinase [Nucleotide transport and metabolism];
5-187 1.07e-90

Guanylate kinase [Nucleotide transport and metabolism];


Pssm-ID: 439964  Cd Length: 190  Bit Score: 263.08  E-value: 1.07e-90
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662    5 IVISGPSGTGKSTLLKKLFAEYPDsFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTVA 84
Cdd:COG0194   5 IVLSGPSGAGKTTLVKALLERDPD-LRFSVSATTRPPRPGEVDGVDYHFVSREEFERMIENGEFLEWAEVHGNYYGTPKA 83

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662   85 SVKQVSKSGKTCILDIDMQGVKSVK-AIPElnARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAetGAH 163
Cdd:COG0194  84 EVEEALAAGKDVLLEIDVQGARQVKkKFPD--AVSIFILPPSLEELERRLRGRGTDSEEVIERRLAKAREELAHA--DEF 159

                       170       180
                ....*....|....*....|....
gi 6320662  164 DKVIVNDDLDKAYKELKDFIFAEK 187
Cdd:COG0194 160 DYVVVNDDLDRAVEELKAIIRAER 183
gmk PRK00300
guanylate kinase; Provisional
 5-187 9.90e-88

guanylate kinase; Provisional


Pssm-ID: 234719  Cd Length: 205  Bit Score: 256.17  E-value: 9.90e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662     5 IVISGPSGTGKSTLLKKLFAEyPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTVA 84
Cdd:PRK00300   8 IVLSGPSGAGKSTLVKALLER-DPNLQLSVSATTRAPRPGEVDGVDYFFVSKEEFEEMIENGEFLEWAEVFGNYYGTPRS 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662    85 SVKQVSKSGKTCILDIDMQGVKSVK-AIPElnARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAetGAH 163
Cdd:PRK00300  87 PVEEALAAGKDVLLEIDWQGARQVKkKMPD--AVSIFILPPSLEELERRLRGRGTDSEEVIARRLAKAREEIAHA--SEY 162

                        170       180
                 ....*....|....*....|....
gi 6320662   164 DKVIVNDDLDKAYKELKDFIFAEK 187
Cdd:PRK00300 163 DYVIVNDDLDTALEELKAIIRAER 186
GuKc smart00072
Guanylate kinase homologues; Active enzymes catalyze ATP-dependent phosphorylation of GMP to ...
 11-187 4.01e-79

Guanylate kinase homologues; Active enzymes catalyze ATP-dependent phosphorylation of GMP to GDP. Structure resembles that of adenylate kinase. So-called membrane-associated guanylate kinase homologues (MAGUKs) do not possess guanylate kinase activities; instead at least some possess protein-binding functions.


Pssm-ID: 214504 [Multi-domain]  Cd Length: 174  Bit Score: 233.34  E-value: 4.01e-79
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662      11 SGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTVASVKQVS 90
Cdd:smart00072   1 SGVGKGTLLAELIQEIPDAFERVVSHTTRPPRPGEVNGVDYHFVSKEEFEDDIKSGLFLEWGEYEGNYYGTSKETIRQVA 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662      91 KSGKTCILDIDMQGVKSVKAiPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAElaYAETGAHDKVIVND 170
Cdd:smart00072  81 EKGKHCLLDIDPQGVKQLRK-AQLYPIVIFIAPPSSEELERRLRQRGTETSERIQKRLAAAQKE--AQEYHLFDYVIVND 157

                          170
                   ....*....|....*..
gi 6320662     171 DLDKAYKELKDFIFAEK 187
Cdd:smart00072 158 DLEDAYEELKEILEAEQ 174
GMPK cd00071
Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), ...
 4-180 1.69e-72

Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to guanosine monophosphate (GMP) to yield adenosine diphosphate (ADP) and guanosine diphosphate (GDP). It plays an essential role in the biosynthesis of guanosine triphosphate (GTP). This enzyme is also important for the activation of some antiviral and anticancer agents, such as acyclovir, ganciclovir, carbovir, and thiopurines.


Pssm-ID: 238026  Cd Length: 137  Bit Score: 215.09  E-value: 1.69e-72
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662    4 PIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTV 83
Cdd:cd00071   1 LIVLSGPSGVGKSTLLKRLLEEFDPNFGFSVSHTTRKPRPGEVDGVDYHFVSKEEFERLIENGEFLEWAEFHGNYYGTSK 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662   84 ASVKQVSKSGKTCILDIDMQGVKSVKAiPELNARFLFIAPPsvedlkkrlegrgteteesinkrlsaaqaelayaetgah 163
Cdd:cd00071  81 AAVEEALAEGKIVILEIDVQGARQVKK-SYPDAVSIFILPP--------------------------------------- 120

                       170
                ....*....|....*..
gi 6320662  164 DKVIVNDDLDKAYKELK 180
Cdd:cd00071 121 DYVIVNDDLEKAYEELK 137
PLN02772 PLN02772
guanylate kinase
 3-180 1.35e-67

guanylate kinase


Pssm-ID: 215414 [Multi-domain]  Cd Length: 398  Bit Score: 211.23  E-value: 1.35e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662     3 RPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGST 82
Cdd:PLN02772 136 KPIVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPREMEKDGVHYHFTERSVMEKEIKDGKFLEFASVHGNLYGTS 215

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662    83 VASVKQVSKSGKTCILDIDMQGVKSVKAiPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAET-G 161
Cdd:PLN02772 216 IEAVEVVTDSGKRCILDIDVQGARSVRA-SSLEAIFIFICPPSMEELEKRLRARGTETEEQIQKRLRNAEAELEQGKSsG 294

                        170
                 ....*....|....*....
gi 6320662   162 AHDKVIVNDDLDKAYKELK 180
Cdd:PLN02772 295 IFDHILYNDNLEECYKNLK 313
gmk PRK14738
guanylate kinase; Provisional
 5-187 7.02e-56

guanylate kinase; Provisional


Pssm-ID: 237809  Cd Length: 206  Bit Score: 175.30  E-value: 7.02e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662     5 IVISGPSGTGKSTLLKKLfAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTVA 84
Cdd:PRK14738  16 VVISGPSGVGKDAVLARM-RERKLPFHFVVTATTRPKRPGEIDGVDYHFVTPEEFREMISQNELLEWAEVYGNYYGVPKA 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662    85 SVKQVSKSGKTCILDIDMQGVKSVKAI-PelNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELayAETGAH 163
Cdd:PRK14738  95 PVRQALASGRDVIVKVDVQGAASIKRLvP--EAVFIFLAPPSMDELTRRLELRRTESPEELERRLATAPLEL--EQLPEF 170

                        170       180
                 ....*....|....*....|....*.
gi 6320662   164 DKVIVN--DDLDKAYKELKDFIFAEK 187
Cdd:PRK14738 171 DYVVVNpeDRLDEAVAQIMAIISAEK 196
gmk PRK14737
guanylate kinase; Provisional
 6-187 2.65e-48

guanylate kinase; Provisional


Pssm-ID: 173199  Cd Length: 186  Bit Score: 155.54  E-value: 2.65e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662     6 VISGPSGTGKSTLLKKLFAEYPDsFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTVAS 85
Cdd:PRK14737   8 IISSVAGGGKSTIIQALLEEHPD-FLFSISCTTRAPRPGDEEGKTYFFLTIEEFKKGIADGEFLEWAEVHDNYYGTPKAF 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662    86 VKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELayAETGAHDK 165
Cdd:PRK14737  87 IEDAFKEGRSAIMDIDVQGAKIIKEKFPERIVTIFIEPPSEEEWEERLIHRGTDSEESIEKRIENGIIEL--DEANEFDY 164

                        170       180
                 ....*....|....*....|..
gi 6320662   166 VIVNDDLDKAYKELKDFIFAEK 187
Cdd:PRK14737 165 KIINDDLEDAIADLEAIICGKK 186
ExeA COG3267
Type II secretory pathway ATPase component GspA/ExeA/MshM [Intracellular trafficking, ...
 5-30 4.92e-05

Type II secretory pathway ATPase component GspA/ExeA/MshM [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 442498 [Multi-domain]  Cd Length: 261  Bit Score: 42.47  E-value: 4.92e-05
                        10        20
                ....*....|....*....|....*.
gi 6320662    5 IVISGPSGTGKSTLLKKLFAEYPDSF 30
Cdd:COG3267  46 VVLTGEVGTGKTTLLRRLLERLPDDV 71
PhnL COG4778
Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [Inorganic ion ...
 5-29 6.79e-05

Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [Inorganic ion transport and metabolism];


Pssm-ID: 443809 [Multi-domain]  Cd Length: 229  Bit Score: 42.04  E-value: 6.79e-05
                        10        20
                ....*....|....*....|....*.
gi 6320662    5 IVISGPSGTGKSTLLKKLFAEY-PDS 29
Cdd:COG4778  40 VALTGPSGAGKSTLLKCIYGNYlPDS 65
AAA smart00382
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a ...
 3-73 1.82e-04

ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.


Pssm-ID: 214640 [Multi-domain]  Cd Length: 148  Bit Score: 40.05  E-value: 1.82e-04
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6320662       3 RPIVISGPSGTGKSTLLKKLFAEYPDSFG--FSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQ 73
Cdd:smart00382   3 EVILIVGPPGSGKTTLARALARELGPPGGgvIYIDGEDILEEVLDQLLLIIVGGKKASGSGELRLRLALALAR 75
FetA COG4619
ABC-type iron transporter FetAB, ATPase component [Inorganic ion transport and metabolism];
5-63 3.24e-04

ABC-type iron transporter FetAB, ATPase component [Inorganic ion transport and metabolism];


Pssm-ID: 443661 [Multi-domain]  Cd Length: 209  Bit Score: 39.80  E-value: 3.24e-04
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6320662    5 IVISGPSGTGKSTLLKKLFAEYPdsfgfsvssttrtPRAGEV--NGKDYNFVSVDEFKSMI 63
Cdd:COG4619  29 VAITGPSGSGKSTLLRALADLDP-------------PTSGEIylDGKPLSAMPPPEWRRQV 76
FtsE COG2884
Cell division ATPase FtsE [Cell cycle control, cell division, chromosome partitioning];
7-50 4.42e-04

Cell division ATPase FtsE [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442130 [Multi-domain]  Cd Length: 223  Bit Score: 39.65  E-value: 4.42e-04
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*.
gi 6320662    7 ISGPSGTGKSTLLKKLFAEYPdsfgfsvssttrtPRAGE--VNGKD 50
Cdd:COG2884  33 LTGPSGAGKSTLLKLLYGEER-------------PTSGQvlVNGQD 65
NACHT COG5635
Predicted NTPase, NACHT family domain [Signal transduction mechanisms];
2-98 4.83e-04

Predicted NTPase, NACHT family domain [Signal transduction mechanisms];


Pssm-ID: 444362 [Multi-domain]  Cd Length: 935  Bit Score: 40.17  E-value: 4.83e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662    2 SRPIVISGPSGTGKSTLLKKLFAEYPDSFGFsvsSTTRTPrageVngkdynFVSVDEFKsmiKNNEFIEW-AQFSGNYYG 80
Cdd:COG5635 180 KKRLLILGEPGSGKTTLLRYLALELAERYLD---AEDPIP----I------LIELRDLA---EEASLEDLlAEALEKRGG 243

                        90
                ....*....|....*...
gi 6320662   81 STVASVKQVSKSGKTCIL 98
Cdd:COG5635 244 EPEDALERLLRNGRLLLL 261
ModF COG1119
ABC-type molybdenum transport system, ATPase component ModF/photorepair protein PhrA ...
 6-63 6.25e-04

ABC-type molybdenum transport system, ATPase component ModF/photorepair protein PhrA [Inorganic ion transport and metabolism];


Pssm-ID: 440736 [Multi-domain]  Cd Length: 250  Bit Score: 39.30  E-value: 6.25e-04
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 6320662    6 VISGPSGTGKSTLLKKLFAEYPDSFGFSVssttrtpragEVNGKDYNFVSVDEFKSMI 63
Cdd:COG1119  33 AILGPNGAGKSTLLSLITGDLPPTYGNDV----------RLFGERRGGEDVWELRKRI 80
AAA_33 pfam13671
AAA domain; This family of domains contain only a P-loop motif, that is characteriztic of the ...
 5-159 8.18e-04

AAA domain; This family of domains contain only a P-loop motif, that is characteriztic of the AAA superfamily. Many of the proteins in this family are just short fragments so there is no Walker B motif.


Pssm-ID: 463952 [Multi-domain]  Cd Length: 143  Bit Score: 38.06  E-value: 8.18e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662      5 IVISGPSGTGKSTLLKKLFAEYPdsfgfsvssttrtpragevngkdYNFVSVDEFKSMIKNNEFI---EWAQFSGNYYGS 81
Cdd:pfam13671   2 ILLVGLPGSGKSTLARRLLEELG-----------------------AVRLSSDDERKRLFGEGRPsisYYTDATDRTYER 58

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6320662     82 TVASVKQVSKSGKTCILD---IDMQGVKSVKAI-PELNARF---LFIAPPSVedLKKRLEGRGTETEESINKRLSAAQAE 154
Cdd:pfam13671  59 LHELARIALRAGRPVILDatnLRRDERARLLALaREYGVPVrivVFEAPEEV--LRERLAARARAGGDPSDVPEEVLDRQ 136


                  ....*
gi 6320662    155 LAYAE 159
Cdd:pfam13671 137 KARFE 141
NK cd02019
Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of ...
 5-26 1.11e-03

Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates to nucleosides/nucleotides, nucleoside monophosphates, or sugars. Members of this family play a wide variety of essential roles in nucleotide metabolism, the biosynthesis of coenzymes and aromatic compounds, as well as the metabolism of sugar and sulfate.


Pssm-ID: 238977 [Multi-domain]  Cd Length: 69  Bit Score: 36.16  E-value: 1.11e-03
                        10        20
                ....*....|....*....|..
gi 6320662    5 IVISGPSGTGKSTLLKKLFAEY 26
Cdd:cd02019   2 IAITGGSGSGKSTVAKKLAEQL 23
AAA_22 pfam13401
AAA domain;
3-27 1.17e-03

AAA domain;


Pssm-ID: 379165 [Multi-domain]  Cd Length: 129  Bit Score: 37.32  E-value: 1.17e-03
                          10        20
                  ....*....|....*....|....*
gi 6320662      3 RPIVISGPSGTGKSTLLKKLFAEYP 27
Cdd:pfam13401   6 GILVLTGESGTGKTTLLRRLLEQLP 30
COG3911 COG3911
Predicted ATPase [General function prediction only];
1-22 1.42e-03

Predicted ATPase [General function prediction only];


Pssm-ID: 443117  Cd Length: 180  Bit Score: 37.87  E-value: 1.42e-03
                        10        20
                ....*....|....*....|..
gi 6320662    1 MSRPIVISGPSGTGKSTLLKKL 22
Cdd:COG3911   2 MTRRIVITGGPGSGKTTLLNAL 23
AAA_28 pfam13521
AAA domain;
5-26 1.43e-03

AAA domain;


Pssm-ID: 433278 [Multi-domain]  Cd Length: 164  Bit Score: 37.63  E-value: 1.43e-03
                          10        20
                  ....*....|....*....|..
gi 6320662      5 IVISGPSGTGKSTLLKKLFAEY 26
Cdd:pfam13521   2 IVITGGPSTGKTTLAEALAARF 23
CydC COG4987
ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease ...
 5-63 1.75e-03

ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 444011 [Multi-domain]  Cd Length: 569  Bit Score: 38.21  E-value: 1.75e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6320662    5 IVISGPSGTGKSTLLKKLFAEYPdsfgfsvssttrtPRAGEV--NGKDYNFVSVDEFKSMI 63
Cdd:COG4987 364 VAIVGPSGSGKSTLLALLLRFLD-------------PQSGSItlGGVDLRDLDEDDLRRRI 411
AAA_14 pfam13173
AAA domain; This family of domains contain a P-loop motif that is characteriztic of the AAA ...
 2-29 1.96e-03

AAA domain; This family of domains contain a P-loop motif that is characteriztic of the AAA superfamily.


Pssm-ID: 463799 [Multi-domain]  Cd Length: 128  Bit Score: 36.80  E-value: 1.96e-03
                          10        20
                  ....*....|....*....|....*...
gi 6320662      2 SRPIVISGPSGTGKSTLLKKLFAEYPDS 29
Cdd:pfam13173   2 RKILVITGPRQVGKTTLLLQLIKELLPP 29
MK0520 COG2401
ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction ...
 5-53 2.26e-03

ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only];


Pssm-ID: 441957 [Multi-domain]  Cd Length: 222  Bit Score: 37.63  E-value: 2.26e-03
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*....
gi 6320662    5 IVISGPSGTGKSTLLKKLFAEYPDsfgfsvssttrTPRAGEVNGKDYNF 53
Cdd:COG2401  59 VLIVGASGSGKSTLLRLLAGALKG-----------TPVAGCVDVPDNQF 96
MMR_HSR1 pfam01926
50S ribosome-binding GTPase; The full-length GTPase protein is required for the complete ...
 5-57 2.43e-03

50S ribosome-binding GTPase; The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.


Pssm-ID: 460387 [Multi-domain]  Cd Length: 113  Bit Score: 36.06  E-value: 2.43e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 6320662      5 IVISGPSGTGKSTLLKKLFAEYPdsfgfSVSS---TTRTPRAGEVNGKDYNFVSVD 57
Cdd:pfam01926   2 VALVGRPNVGKSTLINALTGAKA-----IVSDypgTTRDPNEGRLELKGKQIILVD 52
AAA_16 pfam13191
AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the ...
 3-35 2.78e-03

AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the AAA superfamily.


Pssm-ID: 433025 [Multi-domain]  Cd Length: 167  Bit Score: 36.71  E-value: 2.78e-03
                          10        20        30
                  ....*....|....*....|....*....|...
gi 6320662      3 RPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVS 35
Cdd:pfam13191  25 PSVLLTGEAGTGKTTLLRELLRALERDGGYFLR 57
VirB11-like_ATPase cd01130
Type IV secretory pathway component VirB11-like; Type IV secretory pathway component VirB11, ...
 5-27 2.90e-03

Type IV secretory pathway component VirB11-like; Type IV secretory pathway component VirB11, and related ATPases. The homohexamer, VirB11 is one of eleven Vir (virulence) proteins, which are required for T-pilus biogenesis and virulence in the transfer of T-DNA from the bacterial Ti (tumor-inducing)-plasmid into plant cells. The pilus is a fibrous cell surface organelle, which mediates adhesion between bacteria during conjugative transfer or between bacteria and host eukaryotic cells during infection. VirB11-related ATPases include Sulfolobus acidocaldarius FlaI, which plays key roles in archaellum (archaeal flagellum) assembly and motility functions, and the pilus assembly proteins CpaF/TadA and TrbB. This alignment contains the C-terminal domain, which is the ATPase.


Pssm-ID: 410874 [Multi-domain]  Cd Length: 177  Bit Score: 36.75  E-value: 2.90e-03
                        10        20
                ....*....|....*....|...
gi 6320662    5 IVISGPSGTGKSTLLKKLFAEYP 27
Cdd:cd01130  15 ILISGGTGSGKTTLLNALLSFIP 37
ABCC_MRP_Like cd03228
ATP-binding cassette domain of multidrug resistance protein-like transporters; The MRP ...
 5-63 3.06e-03

ATP-binding cassette domain of multidrug resistance protein-like transporters; The MRP (Multidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.


Pssm-ID: 213195 [Multi-domain]  Cd Length: 171  Bit Score: 36.59  E-value: 3.06e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6320662    5 IVISGPSGTGKSTLLKKLFAEYPdsfgfsvssttrtPRAGEV--NGKDYNFVSVDEFKSMI 63
Cdd:cd03228  31 VAIVGPSGSGKSTLLKLLLRLYD-------------PTSGEIliDGVDLRDLDLESLRKNI 78
ABC_Org_Solvent_Resistant cd03261
ATP-binding cassette transport system involved in resistance to organic solvents; ABC ...
 5-50 3.41e-03

ATP-binding cassette transport system involved in resistance to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.


Pssm-ID: 213228 [Multi-domain]  Cd Length: 235  Bit Score: 37.10  E-value: 3.41e-03
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*...
gi 6320662    5 IVISGPSGTGKSTLLKKLFAEYpdsfgfsvssttrTPRAGEV--NGKD 50
Cdd:cd03261  29 LAIIGPSGSGKSTLLRLIVGLL-------------RPDSGEVliDGED 63
COG0645 COG0645
Predicted kinase, contains AAA domain [General function prediction only];
5-45 3.57e-03

Predicted kinase, contains AAA domain [General function prediction only];


Pssm-ID: 440410 [Multi-domain]  Cd Length: 164  Bit Score: 36.43  E-value: 3.57e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|..
gi 6320662    5 IVISGPSGTGKSTLLKKLFAEYP----DS-------FGFSVSSTTRTPRAGE 45
Cdd:COG0645   2 ILVCGLPGSGKSTLARALAERLGavrlRSdvvrkrlFGAGLAPLERSPEATA 53
CMPK cd02020
Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine ...
 5-59 4.01e-03

Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor.


Pssm-ID: 238978 [Multi-domain]  Cd Length: 147  Bit Score: 35.93  E-value: 4.01e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 6320662    5 IVISGPSGTGKSTLLKKLfAEYpdsFGFSVSSTT--RTPRAGEVNGKDYNFVSVDEF 59
Cdd:cd02020   2 IAIDGPAGSGKSTVAKLL-AKK---LGLPYLDTGgiRTEEVGKLASEVAAIPEVRKA 54
RNA_helicase pfam00910
RNA helicase; This family includes RNA helicases thought to be involved in duplex unwinding ...
 5-74 4.22e-03

RNA helicase; This family includes RNA helicases thought to be involved in duplex unwinding during viral RNA replication. Members of this family are found in a variety of single stranded RNA viruses.


Pssm-ID: 459992  Cd Length: 102  Bit Score: 35.27  E-value: 4.22e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6320662      5 IVISGPSGTGKSTLLKKLFAEYPDSFGFSVSST-TRTPRAGEVNG-KDYNFVSVDEFKSmikNNEFIEWAQF 74
Cdd:pfam00910   1 IWLYGPPGCGKSTLAKYLARALLKKLGLPKDSVySRNPDDDFWDGyTGQPVVIIDDFGQ---NPDGPDEAEL 69
MlaF COG1127
ATPase subunit MlaF of the ABC-type intermembrane phospholipid transporter Mla [Cell wall ...
 5-20 4.30e-03

ATPase subunit MlaF of the ABC-type intermembrane phospholipid transporter Mla [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440744 [Multi-domain]  Cd Length: 241  Bit Score: 36.50  E-value: 4.30e-03
                        10
                ....*....|....*.
gi 6320662    5 IVISGPSGTGKSTLLK 20
Cdd:COG1127  34 LAIIGGSGSGKSVLLK 49
Tmk COG0125
Thymidylate kinase [Nucleotide transport and metabolism]; Thymidylate kinase is part of the ...
 5-46 4.61e-03

Thymidylate kinase [Nucleotide transport and metabolism]; Thymidylate kinase is part of the Pathway/BioSystem: Thymidylate biosynthesis


Pssm-ID: 439895 [Multi-domain]  Cd Length: 206  Bit Score: 36.29  E-value: 4.61e-03
                        10        20        30        40
                ....*....|....*....|....*....|....*....|..
gi 6320662    5 IVISGPSGTGKSTLLKKLfAEYPDSFGFSVsSTTRTPRAGEV 46
Cdd:COG0125   6 IVFEGIDGSGKSTQIKLL-AEYLEARGYDV-VLTREPGGTPL 45
GlnQ COG1126
ABC-type polar amino acid transport system, ATPase component [Amino acid transport and ...
 5-20 5.01e-03

ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism];


Pssm-ID: 440743 [Multi-domain]  Cd Length: 239  Bit Score: 36.51  E-value: 5.01e-03
                        10
                ....*....|....*.
gi 6320662    5 IVISGPSGTGKSTLLK 20
Cdd:COG1126  30 VVIIGPSGSGKSTLLR 45
Udk COG0572
Uridine kinase [Nucleotide transport and metabolism]; Uridine kinase is part of the Pathway ...
 1-25 8.33e-03

Uridine kinase [Nucleotide transport and metabolism]; Uridine kinase is part of the Pathway/BioSystem: Pyrimidine salvage


Pssm-ID: 440337 [Multi-domain]  Cd Length: 206  Bit Score: 35.59  E-value: 8.33e-03
                        10        20
                ....*....|....*....|....*..
gi 6320662    1 MSRPIV--ISGPSGTGKSTLLKKLFAE 25
Cdd:COG0572   4 SGKPRIigIAGPSGSGKTTFARRLAEQ 30
cdc6 PRK00411
ORC1-type DNA replication protein;
2-26 8.73e-03

ORC1-type DNA replication protein;


Pssm-ID: 234751 [Multi-domain]  Cd Length: 394  Bit Score: 35.98  E-value: 8.73e-03
                         10        20
                 ....*....|....*....|....*..
gi 6320662     2 SRP--IVISGPSGTGKSTLLKKLFAEY 26
Cdd:PRK00411  53 SRPlnVLIYGPPGTGKTTTVKKVFEEL 79
YddA COG4178
ABC-type uncharacterized transport system, permease and ATPase components [General function ...
 5-20 8.89e-03

ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only];


Pssm-ID: 443337 [Multi-domain]  Cd Length: 571  Bit Score: 36.32  E-value: 8.89e-03
                        10
                ....*....|....*.
gi 6320662    5 IVISGPSGTGKSTLLK 20
Cdd:COG4178 392 LLITGPSGSGKSTLLR 407
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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