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Conserved domains on  [gi|6321534|ref|NP_011611|]
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Ask10p [Saccharomyces cerevisiae S288C]

Protein Classification

PH domain-containing protein( domain architecture ID 106840)

Pleckstrin homology (PH) domain-containing protein may be involved in targeting a protein to the appropriate cellular location or interacting with a binding partner

CATH:  2.30.29.30
Gene Ontology:  GO:0005515

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
BAR_4 pfam20400
BAR-like domain; This entry represents a BAR-like domain found in a variety of fungal proteins.
251-448 1.10e-83

BAR-like domain; This entry represents a BAR-like domain found in a variety of fungal proteins.


:

Pssm-ID: 466549  Cd Length: 192  Bit Score: 270.22  E-value: 1.10e-83
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321534     251 SGSIQDIQVILKKYHLSLANQQFKISKEITSTVIPKLEELRKDLRYKITEIKDLHGDFKTNIGAHIQLTSQLLKKYIAAV 330
Cdd:pfam20400    1 SGGIQDVQVILRDYHRQIADQHAKLAREIESSIIPALEGLRKDLKQKIKEIKNLSGDFKNSVDKERELTRKLLQKLIASV 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321534     331 KFMNAHgigndrASPTNKKPHKLDPKHDPYLLKLQLDLQLKRQVAEETYLQEAFINLQSSGLQLEKIIYTKIQHALLRYS 410
Cdd:pfam20400   81 KLLDNA------LGSVDKDPSALTGKNDPYLLNLAVDRQLKRQIDEENYLHKAYLNLQSSGREFEKIIVGEIQKALQTYA 154
                          170       180       190
                   ....*....|....*....|....*....|....*...
gi 6321534     411 ALIDSEARLMIKNMCQELQHGIISKPPAFEWDNFVTQH 448
Cdd:pfam20400  155 ELLKREADLAIQNLVEELRQGPISLPPDFEWNSFVARN 192
PH_20 pfam20399
PH domain; This entry represents a PH domain found in a variety of fungal proteins.
472-613 8.51e-17

PH domain; This entry represents a PH domain found in a variety of fungal proteins.


:

Pssm-ID: 466548  Cd Length: 84  Bit Score: 76.44  E-value: 8.51e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321534     472 YPHMKSPLAKCIKAGYFLKKSELLPTYHQGYFVLTSN-YIHEFQSSDFYNLSsstpnstkssaysssvsiadtyananna 550
Cdd:pfam20399    1 YPGKDSPLVKPIRAGYLERKSKYLKSYTEGYYVLTPAgFLHEFKSSDPFKTG---------------------------- 52
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6321534     551 kannhhrqasdvhnsstttggtagangirgirkksyLAPIMSIPLNDCTL-----KDASSTKFVLVGK 613
Cdd:pfam20399   53 ------------------------------------QAPVFSLYLPECTLgppsdPGSSSHKFHLKGK 84
 
Name Accession Description Interval E-value
BAR_4 pfam20400
BAR-like domain; This entry represents a BAR-like domain found in a variety of fungal proteins.
251-448 1.10e-83

BAR-like domain; This entry represents a BAR-like domain found in a variety of fungal proteins.


Pssm-ID: 466549  Cd Length: 192  Bit Score: 270.22  E-value: 1.10e-83
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321534     251 SGSIQDIQVILKKYHLSLANQQFKISKEITSTVIPKLEELRKDLRYKITEIKDLHGDFKTNIGAHIQLTSQLLKKYIAAV 330
Cdd:pfam20400    1 SGGIQDVQVILRDYHRQIADQHAKLAREIESSIIPALEGLRKDLKQKIKEIKNLSGDFKNSVDKERELTRKLLQKLIASV 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321534     331 KFMNAHgigndrASPTNKKPHKLDPKHDPYLLKLQLDLQLKRQVAEETYLQEAFINLQSSGLQLEKIIYTKIQHALLRYS 410
Cdd:pfam20400   81 KLLDNA------LGSVDKDPSALTGKNDPYLLNLAVDRQLKRQIDEENYLHKAYLNLQSSGREFEKIIVGEIQKALQTYA 154
                          170       180       190
                   ....*....|....*....|....*....|....*...
gi 6321534     411 ALIDSEARLMIKNMCQELQHGIISKPPAFEWDNFVTQH 448
Cdd:pfam20400  155 ELLKREADLAIQNLVEELRQGPISLPPDFEWNSFVARN 192
PH_20 pfam20399
PH domain; This entry represents a PH domain found in a variety of fungal proteins.
472-613 8.51e-17

PH domain; This entry represents a PH domain found in a variety of fungal proteins.


Pssm-ID: 466548  Cd Length: 84  Bit Score: 76.44  E-value: 8.51e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321534     472 YPHMKSPLAKCIKAGYFLKKSELLPTYHQGYFVLTSN-YIHEFQSSDFYNLSsstpnstkssaysssvsiadtyananna 550
Cdd:pfam20399    1 YPGKDSPLVKPIRAGYLERKSKYLKSYTEGYYVLTPAgFLHEFKSSDPFKTG---------------------------- 52
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6321534     551 kannhhrqasdvhnsstttggtagangirgirkksyLAPIMSIPLNDCTL-----KDASSTKFVLVGK 613
Cdd:pfam20399   53 ------------------------------------QAPVFSLYLPECTLgppsdPGSSSHKFHLKGK 84
PH_Slm1 cd13311
Slm1 Pleckstrin homology (PH) domain; Slm1 is a component of the target of rapamycin complex 2 ...
483-517 7.03e-04

Slm1 Pleckstrin homology (PH) domain; Slm1 is a component of the target of rapamycin complex 2 (TORC2) signaling pathway. It plays a role in the regulation of actin organization and is a target of sphingolipid signaling during the heat shock response. Slm1 contains a single PH domain that binds PtdIns(4,5)P2, PtdIns(4)P, and dihydrosphingosine 1-phosphate (DHS-1P). Slm1 possesses two binding sites for anionic lipids. The non-canonical binding site of the PH domain of Slm1 is used for ligand binding, and it is proposed that beta-spectrin, Tiam1 and ArhGAP9 also have this type of phosphoinositide binding site. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270121  Cd Length: 110  Bit Score: 40.40  E-value: 7.03e-04
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 6321534   483 IKAGYFLKKSELLPTYHQGYFVLT-SNYIHEFQSSD 517
Cdd:cd13311    4 LISGILERKSKFLKSYSKGYYVLTpAGYLHEFKSSD 39
 
Name Accession Description Interval E-value
BAR_4 pfam20400
BAR-like domain; This entry represents a BAR-like domain found in a variety of fungal proteins.
251-448 1.10e-83

BAR-like domain; This entry represents a BAR-like domain found in a variety of fungal proteins.


Pssm-ID: 466549  Cd Length: 192  Bit Score: 270.22  E-value: 1.10e-83
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321534     251 SGSIQDIQVILKKYHLSLANQQFKISKEITSTVIPKLEELRKDLRYKITEIKDLHGDFKTNIGAHIQLTSQLLKKYIAAV 330
Cdd:pfam20400    1 SGGIQDVQVILRDYHRQIADQHAKLAREIESSIIPALEGLRKDLKQKIKEIKNLSGDFKNSVDKERELTRKLLQKLIASV 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321534     331 KFMNAHgigndrASPTNKKPHKLDPKHDPYLLKLQLDLQLKRQVAEETYLQEAFINLQSSGLQLEKIIYTKIQHALLRYS 410
Cdd:pfam20400   81 KLLDNA------LGSVDKDPSALTGKNDPYLLNLAVDRQLKRQIDEENYLHKAYLNLQSSGREFEKIIVGEIQKALQTYA 154
                          170       180       190
                   ....*....|....*....|....*....|....*...
gi 6321534     411 ALIDSEARLMIKNMCQELQHGIISKPPAFEWDNFVTQH 448
Cdd:pfam20400  155 ELLKREADLAIQNLVEELRQGPISLPPDFEWNSFVARN 192
PH_20 pfam20399
PH domain; This entry represents a PH domain found in a variety of fungal proteins.
472-613 8.51e-17

PH domain; This entry represents a PH domain found in a variety of fungal proteins.


Pssm-ID: 466548  Cd Length: 84  Bit Score: 76.44  E-value: 8.51e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321534     472 YPHMKSPLAKCIKAGYFLKKSELLPTYHQGYFVLTSN-YIHEFQSSDFYNLSsstpnstkssaysssvsiadtyananna 550
Cdd:pfam20399    1 YPGKDSPLVKPIRAGYLERKSKYLKSYTEGYYVLTPAgFLHEFKSSDPFKTG---------------------------- 52
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6321534     551 kannhhrqasdvhnsstttggtagangirgirkksyLAPIMSIPLNDCTL-----KDASSTKFVLVGK 613
Cdd:pfam20399   53 ------------------------------------QAPVFSLYLPECTLgppsdPGSSSHKFHLKGK 84
PH_Slm1 cd13311
Slm1 Pleckstrin homology (PH) domain; Slm1 is a component of the target of rapamycin complex 2 ...
483-517 7.03e-04

Slm1 Pleckstrin homology (PH) domain; Slm1 is a component of the target of rapamycin complex 2 (TORC2) signaling pathway. It plays a role in the regulation of actin organization and is a target of sphingolipid signaling during the heat shock response. Slm1 contains a single PH domain that binds PtdIns(4,5)P2, PtdIns(4)P, and dihydrosphingosine 1-phosphate (DHS-1P). Slm1 possesses two binding sites for anionic lipids. The non-canonical binding site of the PH domain of Slm1 is used for ligand binding, and it is proposed that beta-spectrin, Tiam1 and ArhGAP9 also have this type of phosphoinositide binding site. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270121  Cd Length: 110  Bit Score: 40.40  E-value: 7.03e-04
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 6321534   483 IKAGYFLKKSELLPTYHQGYFVLT-SNYIHEFQSSD 517
Cdd:cd13311    4 LISGILERKSKFLKSYSKGYYVLTpAGYLHEFKSSD 39
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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