|
Name |
Accession |
Description |
Interval |
E-value |
| NUP214 |
pfam16755 |
Nucleoporin or Nuclear pore complex subunit NUP214=Nup159; NUP214 is a family of nucleoporins ... |
24-380 |
0e+00 |
|
Nucleoporin or Nuclear pore complex subunit NUP214=Nup159; NUP214 is a family of nucleoporins or nuclear pore complex subunit 214 in vertebrates and 159 in yeast found in eukaryotes. It participates in allowing family 2 of DEAD-box ATPases Dbp5/DDX19 to localize to the nuclear pore complex where it takes part in mRNA export and re-modelling. NUP214 helps to regulate DEAD-box ATPase activity.
:
Pssm-ID: 407023 Cd Length: 359 Bit Score: 607.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 24 KQILPSFNEKLPFASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITS-DSTPLTFKWEKEIPDVIFVCFHGDQ-VLV 101
Cdd:pfam16755 1 ARILPSYNEKLPFASLQNLDISNHKSLYVAASGGKTVIGDLQLLRDFITNdDNAELTFKWEKEISDVIAVKFHGDEkVIV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 102 STRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDR 181
Cdd:pfam16755 81 NTKGQLYSIDLESLSEPETIHSFEKDLVQLKLFQSTLILLDSNNQLFGLDLSQKLLKPLAENVASFDVLDDKLVALLKDR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 182 SFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGNVISETDDEVSYDQKMYIIKHIDGSASFQE 261
Cdd:pfam16755 161 SVQVFEIQNGVQNEFKEFSLPSELSEELVDGYEPISIKVLSKNEYLVVFGNPVSETEEDVSYDHKMYIVRKKDEEVTFQE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 262 TFDITPPFGQIVRFPYMYKVTLSGLIEPDANVNVLASSCSSEVSIWDSKQVIEPSQDSERAVLPISEETDKDTNPIGVAV 341
Cdd:pfam16755 241 SFDITPAFGSVLRYPTYYNIILPGLIEEDKNVNILASACSSEITIWDSKEVVQPSQDSERAVLPISKETDNDTNPIGIAL 320
|
330 340 350
....*....|....*....|....*....|....*....
gi 6322076 342 DVVTSGTILEPCSGVDTIERLPLVYILNNEGSLQIVGLF 380
Cdd:pfam16755 321 DVVTSGVIPEPCPGVDKIDRLPLIYILNNEGNLQIVGLY 359
|
|
| Herpes_BLLF1 super family |
cl37540 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
448-700 |
1.25e-08 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
The actual alignment was detected with superfamily member pfam05109:
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 59.93 E-value: 1.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 448 TQPAAANSLQSQSSSTFGAPSFGSSAFKIDLPSVSSTSTGVASSEQDATDPASA----KPVFGKPAFGAIAKEPSTSEYA 523
Cdd:pfam05109 459 TAPASTGPTVSTADVTSPTPAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAvttpTPNATSPTPAVTTPTPNATSPT 538
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 524 FGKPSFGA------PSFGSGKSSVESPASGSAFgkPSFGTPSFGSGNSSVEPPASGSAFGK--PSFGTPSFGSGNSSAEP 595
Cdd:pfam05109 539 LGKTSPTSavttptPNATSPTPAVTTPTPNATI--PTLGKTSPTSAVTTPTPNATSPTVGEtsPQANTTNHTLGGTSSTP 616
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 596 PASGSafgkPSFGTSAFGTASSNETNSG--SIFGKAAFGSSSFAPANNE--------------LFGSNFTISKPTVDSPK 659
Cdd:pfam05109 617 VVTSP----PKNATSAVTTGQHNITSSStsSMSLRPSSISETLSPSTSDnstshmplltsahpTGGENITQVTPASTSTH 692
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 6322076 660 EVDSTSPFPSSGDQSEDESKSDVDSSSTP------FGTKPNTSTKPK 700
Cdd:pfam05109 693 HVSTSSPAPRPGTTSQASGPGNSSTSTKPgevnvtKGTPPKNATSPQ 739
|
|
| PTZ00395 super family |
cl33180 |
Sec24-related protein; Provisional |
558-874 |
7.02e-05 |
|
Sec24-related protein; Provisional
The actual alignment was detected with superfamily member PTZ00395:
Pssm-ID: 185594 [Multi-domain] Cd Length: 1560 Bit Score: 47.76 E-value: 7.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 558 PSFGSGNSSVEPPASGSAFGKP---SFGTPSFGSGN-------SSAEPPASGSAFGKPSFGTSAFGTASSNETNSGSIFG 627
Cdd:PTZ00395 326 NSFDRGNEKTYQIYGGFHDGSPnaaSAGAPFNGLGNqadgghiNQVHPDARGAWAGGPHSNASYNCAAYSNAAQSNAAQS 405
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 628 KAAFGSSSFAPANNELFGSNftiSKPTVDSPKEVDSTSPFPSSGDQSEDESKSDVDSSSTPFgTKPNTSTKPKTNAFDFG 707
Cdd:PTZ00395 406 NAGFSNAGYSNPGNSNPGYN---NAPNSNTPYNNPPNSNTPYSNPPNSNPPYSNLPYSNTPY-SNAPLSNAPPSSAKDHH 481
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 708 SSSFGSGFSKALESVGSDTTFKFGTQASPFSSQLGN-------KSPFSSftkdDTENGSLSKGSTSEINDDNEEHESNGP 780
Cdd:PTZ00395 482 SAYHAAYQHRAANQPAANLPTANQPAANNFHGAAGNsvgnpfaSRPFGS----APYGGNAATTADPNGIAKREDHPEGGT 557
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 781 NVSGNDLTD-STVEQTSSTRLPETPSDEDGEVVeeeaqkspigKLTETIKKSAN-IDMAGLKNPVFgNHVKAKSESPFSA 858
Cdd:PTZ00395 558 NRQKYEQSDeESVESSSSENSSENENEVTDKGE----------EIYSLLKKTINrIDMNKIPRPII-NTQEKKKKKNLKV 626
|
330
....*....|....*...
gi 6322076 859 FAT--NITKPSSTTPAFS 874
Cdd:PTZ00395 627 FETckYISPPSYYQPYIS 644
|
|
| PRK08581 super family |
cl35718 |
amidase domain-containing protein; |
751-1006 |
4.40e-03 |
|
amidase domain-containing protein;
The actual alignment was detected with superfamily member PRK08581:
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 41.70 E-value: 4.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 751 TKDDTENGSLSKGSTSEINDDNEEHESNGPNVSGNDLTDSTVEQTSSTRLPETPSDedgevveeeaqkspigklTETIKK 830
Cdd:PRK08581 26 YADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFSTI------------------DSSTSD 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 831 SANIdmaglKNPVFGNHVKAKSESPF--SAFATNITKPSSTTPAFSFGNST--MNKSNTSTVSPMEEADTKETSEKGPIT 906
Cdd:PRK08581 88 SNNI-----IDFIYKNLPQTNINQLLtkNKYDDNYSLTTLIQNLFNLNSDIsdYEQPRNSEKSTNDSNKNSDSSIKNDTD 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 907 LKSVENPFLPAKEERTGESSKKDHNDDPKDGYVSGSEISVRTSESAFDTTANEEipKSQDVNNHEKSETDP---KYSQHA 983
Cdd:PRK08581 163 TQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPNQSNSQPASDDTANQKS--SSKDNQSMSDSALDSildQYSEDA 240
|
250 260
....*....|....*....|....*
gi 6322076 984 VVDHDN--KSKEMNETSKNNERSGQ 1006
Cdd:PRK08581 241 KKTQKDyaSQSKKDKTETSNTKNPQ 265
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| NUP214 |
pfam16755 |
Nucleoporin or Nuclear pore complex subunit NUP214=Nup159; NUP214 is a family of nucleoporins ... |
24-380 |
0e+00 |
|
Nucleoporin or Nuclear pore complex subunit NUP214=Nup159; NUP214 is a family of nucleoporins or nuclear pore complex subunit 214 in vertebrates and 159 in yeast found in eukaryotes. It participates in allowing family 2 of DEAD-box ATPases Dbp5/DDX19 to localize to the nuclear pore complex where it takes part in mRNA export and re-modelling. NUP214 helps to regulate DEAD-box ATPase activity.
Pssm-ID: 407023 Cd Length: 359 Bit Score: 607.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 24 KQILPSFNEKLPFASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITS-DSTPLTFKWEKEIPDVIFVCFHGDQ-VLV 101
Cdd:pfam16755 1 ARILPSYNEKLPFASLQNLDISNHKSLYVAASGGKTVIGDLQLLRDFITNdDNAELTFKWEKEISDVIAVKFHGDEkVIV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 102 STRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDR 181
Cdd:pfam16755 81 NTKGQLYSIDLESLSEPETIHSFEKDLVQLKLFQSTLILLDSNNQLFGLDLSQKLLKPLAENVASFDVLDDKLVALLKDR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 182 SFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGNVISETDDEVSYDQKMYIIKHIDGSASFQE 261
Cdd:pfam16755 161 SVQVFEIQNGVQNEFKEFSLPSELSEELVDGYEPISIKVLSKNEYLVVFGNPVSETEEDVSYDHKMYIVRKKDEEVTFQE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 262 TFDITPPFGQIVRFPYMYKVTLSGLIEPDANVNVLASSCSSEVSIWDSKQVIEPSQDSERAVLPISEETDKDTNPIGVAV 341
Cdd:pfam16755 241 SFDITPAFGSVLRYPTYYNIILPGLIEEDKNVNILASACSSEITIWDSKEVVQPSQDSERAVLPISKETDNDTNPIGIAL 320
|
330 340 350
....*....|....*....|....*....|....*....
gi 6322076 342 DVVTSGTILEPCSGVDTIERLPLVYILNNEGSLQIVGLF 380
Cdd:pfam16755 321 DVVTSGVIPEPCPGVDKIDRLPLIYILNNEGNLQIVGLY 359
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
448-700 |
1.25e-08 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 59.93 E-value: 1.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 448 TQPAAANSLQSQSSSTFGAPSFGSSAFKIDLPSVSSTSTGVASSEQDATDPASA----KPVFGKPAFGAIAKEPSTSEYA 523
Cdd:pfam05109 459 TAPASTGPTVSTADVTSPTPAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAvttpTPNATSPTPAVTTPTPNATSPT 538
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 524 FGKPSFGA------PSFGSGKSSVESPASGSAFgkPSFGTPSFGSGNSSVEPPASGSAFGK--PSFGTPSFGSGNSSAEP 595
Cdd:pfam05109 539 LGKTSPTSavttptPNATSPTPAVTTPTPNATI--PTLGKTSPTSAVTTPTPNATSPTVGEtsPQANTTNHTLGGTSSTP 616
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 596 PASGSafgkPSFGTSAFGTASSNETNSG--SIFGKAAFGSSSFAPANNE--------------LFGSNFTISKPTVDSPK 659
Cdd:pfam05109 617 VVTSP----PKNATSAVTTGQHNITSSStsSMSLRPSSISETLSPSTSDnstshmplltsahpTGGENITQVTPASTSTH 692
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 6322076 660 EVDSTSPFPSSGDQSEDESKSDVDSSSTP------FGTKPNTSTKPK 700
Cdd:pfam05109 693 HVSTSSPAPRPGTTSQASGPGNSSTSTKPgevnvtKGTPPKNATSPQ 739
|
|
| dermokine |
cd21118 |
dermokine; Dermokine, also known as epidermis-specific secreted protein SK30/SK89, is a ... |
459-643 |
3.12e-05 |
|
dermokine; Dermokine, also known as epidermis-specific secreted protein SK30/SK89, is a skin-specific glycoprotein that may play a regulatory role in the crosstalk between barrier dysfunction and inflammation, and therefore play a role in inflammatory diseases such as psoriasis. Dermokine is one of the most highly expressed proteins in differentiating keratinocytes, found mainly in the spinous and granular layers of the epidermis, but also in the epithelia of the small intestine, macrophages of the lung, and endothelial cells of the lung. Mouse dermokine has been reported to be encoded by 22 exons, and its expression leads to alpha, beta, and gamma transcripts.
Pssm-ID: 411053 [Multi-domain] Cd Length: 495 Bit Score: 48.46 E-value: 3.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 459 QSSSTfGAPSFGSSAfkidLPSVSSTSTG-VASSEQDA---TDPASAKPVFGKPAFGAIAKEPSTSEYAFGKPSFGAPSF 534
Cdd:cd21118 168 QGGNG-GPLNYGTNS----QGAVAQPGYGtVRGNNQNSgctNPPPSGSHESFSNSGGSSSSGSSGSQGSHGSNGQGSSGS 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 535 GSGKSSVESPASGSAFGKPSFGTPSFGSGNSSvePPASGSAFGKPSFGTPSFGSGNSSAEPPASGSAFGKPSFGTSAFGT 614
Cdd:cd21118 243 SGGQGNGGNNGSSSSNSGNSGGSNGGSSGNSG--SGSGGSSSGGSNGWGGSSSSGGSGGSGGGNKPECNNPGNDVRMAGG 320
|
170 180
....*....|....*....|....*....
gi 6322076 615 ASSNETNSGSiFGKAAFGSSSFAPANNEL 643
Cdd:cd21118 321 GGSQGSKESS-GSHGSNGGNGQAEAVGGL 348
|
|
| PTZ00395 |
PTZ00395 |
Sec24-related protein; Provisional |
558-874 |
7.02e-05 |
|
Sec24-related protein; Provisional
Pssm-ID: 185594 [Multi-domain] Cd Length: 1560 Bit Score: 47.76 E-value: 7.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 558 PSFGSGNSSVEPPASGSAFGKP---SFGTPSFGSGN-------SSAEPPASGSAFGKPSFGTSAFGTASSNETNSGSIFG 627
Cdd:PTZ00395 326 NSFDRGNEKTYQIYGGFHDGSPnaaSAGAPFNGLGNqadgghiNQVHPDARGAWAGGPHSNASYNCAAYSNAAQSNAAQS 405
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 628 KAAFGSSSFAPANNELFGSNftiSKPTVDSPKEVDSTSPFPSSGDQSEDESKSDVDSSSTPFgTKPNTSTKPKTNAFDFG 707
Cdd:PTZ00395 406 NAGFSNAGYSNPGNSNPGYN---NAPNSNTPYNNPPNSNTPYSNPPNSNPPYSNLPYSNTPY-SNAPLSNAPPSSAKDHH 481
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 708 SSSFGSGFSKALESVGSDTTFKFGTQASPFSSQLGN-------KSPFSSftkdDTENGSLSKGSTSEINDDNEEHESNGP 780
Cdd:PTZ00395 482 SAYHAAYQHRAANQPAANLPTANQPAANNFHGAAGNsvgnpfaSRPFGS----APYGGNAATTADPNGIAKREDHPEGGT 557
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 781 NVSGNDLTD-STVEQTSSTRLPETPSDEDGEVVeeeaqkspigKLTETIKKSAN-IDMAGLKNPVFgNHVKAKSESPFSA 858
Cdd:PTZ00395 558 NRQKYEQSDeESVESSSSENSSENENEVTDKGE----------EIYSLLKKTINrIDMNKIPRPII-NTQEKKKKKNLKV 626
|
330
....*....|....*...
gi 6322076 859 FAT--NITKPSSTTPAFS 874
Cdd:PTZ00395 627 FETckYISPPSYYQPYIS 644
|
|
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
751-1006 |
4.40e-03 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 41.70 E-value: 4.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 751 TKDDTENGSLSKGSTSEINDDNEEHESNGPNVSGNDLTDSTVEQTSSTRLPETPSDedgevveeeaqkspigklTETIKK 830
Cdd:PRK08581 26 YADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFSTI------------------DSSTSD 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 831 SANIdmaglKNPVFGNHVKAKSESPF--SAFATNITKPSSTTPAFSFGNST--MNKSNTSTVSPMEEADTKETSEKGPIT 906
Cdd:PRK08581 88 SNNI-----IDFIYKNLPQTNINQLLtkNKYDDNYSLTTLIQNLFNLNSDIsdYEQPRNSEKSTNDSNKNSDSSIKNDTD 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 907 LKSVENPFLPAKEERTGESSKKDHNDDPKDGYVSGSEISVRTSESAFDTTANEEipKSQDVNNHEKSETDP---KYSQHA 983
Cdd:PRK08581 163 TQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPNQSNSQPASDDTANQKS--SSKDNQSMSDSALDSildQYSEDA 240
|
250 260
....*....|....*....|....*
gi 6322076 984 VVDHDN--KSKEMNETSKNNERSGQ 1006
Cdd:PRK08581 241 KKTQKDyaSQSKKDKTETSNTKNPQ 265
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| NUP214 |
pfam16755 |
Nucleoporin or Nuclear pore complex subunit NUP214=Nup159; NUP214 is a family of nucleoporins ... |
24-380 |
0e+00 |
|
Nucleoporin or Nuclear pore complex subunit NUP214=Nup159; NUP214 is a family of nucleoporins or nuclear pore complex subunit 214 in vertebrates and 159 in yeast found in eukaryotes. It participates in allowing family 2 of DEAD-box ATPases Dbp5/DDX19 to localize to the nuclear pore complex where it takes part in mRNA export and re-modelling. NUP214 helps to regulate DEAD-box ATPase activity.
Pssm-ID: 407023 Cd Length: 359 Bit Score: 607.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 24 KQILPSFNEKLPFASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITS-DSTPLTFKWEKEIPDVIFVCFHGDQ-VLV 101
Cdd:pfam16755 1 ARILPSYNEKLPFASLQNLDISNHKSLYVAASGGKTVIGDLQLLRDFITNdDNAELTFKWEKEISDVIAVKFHGDEkVIV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 102 STRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDR 181
Cdd:pfam16755 81 NTKGQLYSIDLESLSEPETIHSFEKDLVQLKLFQSTLILLDSNNQLFGLDLSQKLLKPLAENVASFDVLDDKLVALLKDR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 182 SFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGNVISETDDEVSYDQKMYIIKHIDGSASFQE 261
Cdd:pfam16755 161 SVQVFEIQNGVQNEFKEFSLPSELSEELVDGYEPISIKVLSKNEYLVVFGNPVSETEEDVSYDHKMYIVRKKDEEVTFQE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 262 TFDITPPFGQIVRFPYMYKVTLSGLIEPDANVNVLASSCSSEVSIWDSKQVIEPSQDSERAVLPISEETDKDTNPIGVAV 341
Cdd:pfam16755 241 SFDITPAFGSVLRYPTYYNIILPGLIEEDKNVNILASACSSEITIWDSKEVVQPSQDSERAVLPISKETDNDTNPIGIAL 320
|
330 340 350
....*....|....*....|....*....|....*....
gi 6322076 342 DVVTSGTILEPCSGVDTIERLPLVYILNNEGSLQIVGLF 380
Cdd:pfam16755 321 DVVTSGVIPEPCPGVDKIDRLPLIYILNNEGNLQIVGLY 359
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
448-700 |
1.25e-08 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 59.93 E-value: 1.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 448 TQPAAANSLQSQSSSTFGAPSFGSSAFKIDLPSVSSTSTGVASSEQDATDPASA----KPVFGKPAFGAIAKEPSTSEYA 523
Cdd:pfam05109 459 TAPASTGPTVSTADVTSPTPAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAvttpTPNATSPTPAVTTPTPNATSPT 538
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 524 FGKPSFGA------PSFGSGKSSVESPASGSAFgkPSFGTPSFGSGNSSVEPPASGSAFGK--PSFGTPSFGSGNSSAEP 595
Cdd:pfam05109 539 LGKTSPTSavttptPNATSPTPAVTTPTPNATI--PTLGKTSPTSAVTTPTPNATSPTVGEtsPQANTTNHTLGGTSSTP 616
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 596 PASGSafgkPSFGTSAFGTASSNETNSG--SIFGKAAFGSSSFAPANNE--------------LFGSNFTISKPTVDSPK 659
Cdd:pfam05109 617 VVTSP----PKNATSAVTTGQHNITSSStsSMSLRPSSISETLSPSTSDnstshmplltsahpTGGENITQVTPASTSTH 692
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 6322076 660 EVDSTSPFPSSGDQSEDESKSDVDSSSTP------FGTKPNTSTKPK 700
Cdd:pfam05109 693 HVSTSSPAPRPGTTSQASGPGNSSTSTKPgevnvtKGTPPKNATSPQ 739
|
|
| NupH_GANP |
pfam16768 |
Nucleoporin homology of Germinal-centre associated nuclear protein; NupH_GANP is the ... |
432-697 |
1.97e-06 |
|
Nucleoporin homology of Germinal-centre associated nuclear protein; NupH_GANP is the nucleoporin-homology domain at the N-terminus of human GANP or germinal-centre associated nuclear proteins. GANP is part of the TREX-2 complex that links transcription with nuclear messenger RNA export, and it associates with the mRNP particle through the interaction of the NupH_GANP with NXF1, the export factor. This attachment mediates efficient delivery of mRNPs to nuclear pore complexes.
Pssm-ID: 435572 [Multi-domain] Cd Length: 292 Bit Score: 51.45 E-value: 1.97e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 432 ENPFTSANTSGFTFLKTQPAAANSLQSQSSSTFG---APSFGSSAFKIDLPSVSSTSTGVASSeqdatdpasakpVFGKP 508
Cdd:pfam16768 41 QNNTLSGKNSGFSQVSSFPTTSGVSHSSSGQTLGftqTSGVGLFSGLEHTPSFVATSGPSSSS------------VPSNP 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 509 AFgaiAKEPSTSEYAFGKPsfgaPSFGSGKSSVespaSGSAFGKPSFgtpsfgsgnsSVEPPAsgSAFGKPSFGTPSfgs 588
Cdd:pfam16768 109 GF---SFKSPTNLGAFPST----STFGPESGEV----ASSGFGKTEF----------SFKPPE--NAVFRPIFGAES--- 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 589 gnssaEPPASGSAFGKPSFGTSAFGTAssnetnsgsifGKAAFGSSSFAPA-NNELFGSNFTISKPTVDSpkevDSTSPF 667
Cdd:pfam16768 163 -----EPEKTQSQITSGFFTFSHPVSS-----------GPGGLAPFSFSQVtSSSATSSNFTFSKPVSSN----NSSSAF 222
|
250 260 270
....*....|....*....|....*....|....*
gi 6322076 668 P--SSGDQSEDE---SKSDVDSSSTPFGTKPNTST 697
Cdd:pfam16768 223 ApaLSSQNVEEEkrgPKSFFGSSNSSFTSFPNSSS 257
|
|
| Nucleoporin_FG2 |
pfam15967 |
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ... |
498-696 |
4.10e-06 |
|
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.
Pssm-ID: 435043 [Multi-domain] Cd Length: 586 Bit Score: 51.21 E-value: 4.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 498 PASAKPVFGKPAFGAIAKEPSTSEYAFGKPSFGAPSFGSGKSSVES-----------PASGSAFGKPSFGTPSFGSGNSS 566
Cdd:pfam15967 10 PGSTATAGGGFSFGAAAASNPGSTGGFSFGTLGAAPAATATTTTATlglggglfgqkPATGFTFGTPASSTAATGPTGLT 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 567 VEPPASGSA--------FGKPS-----FGTP---------SFGSGNSSAEPPASGSAFGKPSFGTSAFGTASSNETNSGS 624
Cdd:pfam15967 90 LGTPAATTAastgfslgFNKPAasatpFSLPasstsggglSLGSVLTSTAAQQGATGFTLNLGGTPATTTAVSTGLSLGS 169
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6322076 625 IFgkAAFGSSSFAPANNELFGSnfTISKPTVDSPKEVDSTSPFPSSGDQSEDESKSDVDSSSTPFGTKPNTS 696
Cdd:pfam15967 170 TL--TSLGGSLFQNTNSTGLGQ--TTLGLTLLATSTAPVSAPAASEGLGGLDFSTSSEKKSDKASGTRPEDS 237
|
|
| Nucleoporin_FG |
pfam13634 |
Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in ... |
569-645 |
7.18e-06 |
|
Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in nucleoporin proteins. This family includes the yeast nucleoporins Nup116, Nup100, Nup49, Nup57 and Nup 145.
Pssm-ID: 463941 [Multi-domain] Cd Length: 90 Bit Score: 45.68 E-value: 7.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 569 PPASGSAFG----KPSFGTPSFGSGNSSAEPPASGSAFG---KPSFGTSAFG--TASSNETNSGSIFGKAAfgSSSFAPA 639
Cdd:pfam13634 7 TSTSGGLFGntstTAASGGGLFGAASTATATTSGGGLFGnssSNAPSGGLFGatNTTTQTATGGGLFGNNA--ATTTSTT 84
|
....*.
gi 6322076 640 NNELFG 645
Cdd:pfam13634 85 GGGLFG 90
|
|
| dermokine |
cd21118 |
dermokine; Dermokine, also known as epidermis-specific secreted protein SK30/SK89, is a ... |
459-643 |
3.12e-05 |
|
dermokine; Dermokine, also known as epidermis-specific secreted protein SK30/SK89, is a skin-specific glycoprotein that may play a regulatory role in the crosstalk between barrier dysfunction and inflammation, and therefore play a role in inflammatory diseases such as psoriasis. Dermokine is one of the most highly expressed proteins in differentiating keratinocytes, found mainly in the spinous and granular layers of the epidermis, but also in the epithelia of the small intestine, macrophages of the lung, and endothelial cells of the lung. Mouse dermokine has been reported to be encoded by 22 exons, and its expression leads to alpha, beta, and gamma transcripts.
Pssm-ID: 411053 [Multi-domain] Cd Length: 495 Bit Score: 48.46 E-value: 3.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 459 QSSSTfGAPSFGSSAfkidLPSVSSTSTG-VASSEQDA---TDPASAKPVFGKPAFGAIAKEPSTSEYAFGKPSFGAPSF 534
Cdd:cd21118 168 QGGNG-GPLNYGTNS----QGAVAQPGYGtVRGNNQNSgctNPPPSGSHESFSNSGGSSSSGSSGSQGSHGSNGQGSSGS 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 535 GSGKSSVESPASGSAFGKPSFGTPSFGSGNSSvePPASGSAFGKPSFGTPSFGSGNSSAEPPASGSAFGKPSFGTSAFGT 614
Cdd:cd21118 243 SGGQGNGGNNGSSSSNSGNSGGSNGGSSGNSG--SGSGGSSSGGSNGWGGSSSSGGSGGSGGGNKPECNNPGNDVRMAGG 320
|
170 180
....*....|....*....|....*....
gi 6322076 615 ASSNETNSGSiFGKAAFGSSSFAPANNEL 643
Cdd:cd21118 321 GGSQGSKESS-GSHGSNGGNGQAEAVGGL 348
|
|
| Nucleoporin_FG |
pfam13634 |
Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in ... |
509-603 |
4.68e-05 |
|
Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in nucleoporin proteins. This family includes the yeast nucleoporins Nup116, Nup100, Nup49, Nup57 and Nup 145.
Pssm-ID: 463941 [Multi-domain] Cd Length: 90 Bit Score: 43.37 E-value: 4.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 509 AFGAiAKEPSTSeyAFG----KPSFGAPSFGSGKSSVESPASGSAFG---KPSFGTPSFGSGNSSVEPPASGSAfgkpsf 581
Cdd:pfam13634 2 LFGA-ATSTSGG--LFGntstTAASGGGLFGAASTATATTSGGGLFGnssSNAPSGGLFGATNTTTQTATGGGL------ 72
|
90 100
....*....|....*....|..
gi 6322076 582 gtpsFGSGNSSAEPPASGSAFG 603
Cdd:pfam13634 73 ----FGNNAATTTSTTGGGLFG 90
|
|
| PTZ00395 |
PTZ00395 |
Sec24-related protein; Provisional |
558-874 |
7.02e-05 |
|
Sec24-related protein; Provisional
Pssm-ID: 185594 [Multi-domain] Cd Length: 1560 Bit Score: 47.76 E-value: 7.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 558 PSFGSGNSSVEPPASGSAFGKP---SFGTPSFGSGN-------SSAEPPASGSAFGKPSFGTSAFGTASSNETNSGSIFG 627
Cdd:PTZ00395 326 NSFDRGNEKTYQIYGGFHDGSPnaaSAGAPFNGLGNqadgghiNQVHPDARGAWAGGPHSNASYNCAAYSNAAQSNAAQS 405
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 628 KAAFGSSSFAPANNELFGSNftiSKPTVDSPKEVDSTSPFPSSGDQSEDESKSDVDSSSTPFgTKPNTSTKPKTNAFDFG 707
Cdd:PTZ00395 406 NAGFSNAGYSNPGNSNPGYN---NAPNSNTPYNNPPNSNTPYSNPPNSNPPYSNLPYSNTPY-SNAPLSNAPPSSAKDHH 481
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 708 SSSFGSGFSKALESVGSDTTFKFGTQASPFSSQLGN-------KSPFSSftkdDTENGSLSKGSTSEINDDNEEHESNGP 780
Cdd:PTZ00395 482 SAYHAAYQHRAANQPAANLPTANQPAANNFHGAAGNsvgnpfaSRPFGS----APYGGNAATTADPNGIAKREDHPEGGT 557
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 781 NVSGNDLTD-STVEQTSSTRLPETPSDEDGEVVeeeaqkspigKLTETIKKSAN-IDMAGLKNPVFgNHVKAKSESPFSA 858
Cdd:PTZ00395 558 NRQKYEQSDeESVESSSSENSSENENEVTDKGE----------EIYSLLKKTINrIDMNKIPRPII-NTQEKKKKKNLKV 626
|
330
....*....|....*...
gi 6322076 859 FAT--NITKPSSTTPAFS 874
Cdd:PTZ00395 627 FETckYISPPSYYQPYIS 644
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
426-699 |
1.01e-04 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 46.88 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 426 SSKALSENPFTSANTSGFTFLKTQPAAANSLQSQSSSTFGAPSFGS-SAFKIDLPSVSSTSTGVASSEQDA---TDPASA 501
Cdd:pfam17823 77 SAAHLNSTEVTAEHTPHGTDLSEPATREGAADGAASRALAAAASSSpSSAAQSLPAAIAALPSEAFSAPRAaacRANASA 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 502 KPvfGKPAFGAIAKEPSTSEYAFGKPSFGAPSFGSGKSSVESPASGSAfgkPSFGTPSFGSGNSSVeppasgsAFGKPSF 581
Cdd:pfam17823 157 AP--RAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSA---PATLTPARGISTAAT-------ATGHPAA 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 582 GTPSFGSGNSSAEPPASGSAFGKPSFG-----TSAFGTASS--NETNSGSIFGKAAFGS-------SSFAPANNELFGSN 647
Cdd:pfam17823 225 GTALAAVGNSSPAAGTVTAAVGTVTPAalatlAAAAGTVASaaGTINMGDPHARRLSPAkhmpsdtMARNPAAPMGAQAQ 304
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6322076 648 FTISKPTVDSPkeVDST----SPFPSSGDQSEDESKSDVDSSSTPFGT------KPNTSTKP 699
Cdd:pfam17823 305 GPIIQVSTDQP--VHNTagepTPSPSNTTLEPNTPKSVASTNLAVVTTtkaqakEPSASPVP 364
|
|
| Nucleoporin_FG |
pfam13634 |
Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in ... |
523-627 |
2.09e-04 |
|
Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in nucleoporin proteins. This family includes the yeast nucleoporins Nup116, Nup100, Nup49, Nup57 and Nup 145.
Pssm-ID: 463941 [Multi-domain] Cd Length: 90 Bit Score: 41.45 E-value: 2.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 523 AFGKPSFGAPS-FGSGKSSveSPASGSAFGKPS------FGTPSFGSGNSSvePPASGsafgkpsfgtpSFGSGNSSAEP 595
Cdd:pfam13634 2 LFGAATSTSGGlFGNTSTT--AASGGGLFGAAStatattSGGGLFGNSSSN--APSGG-----------LFGATNTTTQT 66
|
90 100 110
....*....|....*....|....*....|..
gi 6322076 596 PASGSAFGKPsfgtsafgTASSNETNSGSIFG 627
Cdd:pfam13634 67 ATGGGLFGNN--------AATTTSTTGGGLFG 90
|
|
| Nucleoporin_FG2 |
pfam15967 |
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ... |
446-604 |
4.15e-04 |
|
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.
Pssm-ID: 435043 [Multi-domain] Cd Length: 586 Bit Score: 44.66 E-value: 4.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 446 LKTQPAAANSLQSQSSSTFGAPSFGSsafkidLPSVSSTSTGVASSEQDATDPASAKPV---FGKPAFGAIAKEPSTSEY 522
Cdd:pfam15967 430 FEAKRAENKKWQSAPRVTTGPAPFST------VPNAAAVAMAATLTQQQQPTTGTQPSLgvsFGAPFASGIGTGLFGSGP 503
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 523 AFGKPSFGAPSFGSGKSSVESPASGSA-FGKPSfgTPSFGSGNSSVEPPAsGSAFGKPSFGTPSFGSGNSSAE---PPAs 598
Cdd:pfam15967 504 GFGSVTSGGSSFGFGSTSKPSGGSLSAgFGSSS--TSGFNFSNPGINASA-GLTFGVSNPPATGFGTGGQLLQlkkPPA- 579
|
....*.
gi 6322076 599 GSAFGK 604
Cdd:pfam15967 580 GNKRGK 585
|
|
| Nucleoporin_FG2 |
pfam15967 |
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ... |
533-701 |
3.53e-03 |
|
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.
Pssm-ID: 435043 [Multi-domain] Cd Length: 586 Bit Score: 41.96 E-value: 3.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 533 SFGSGKSSVESPASGSAFG----KPSFGTPSFGSGNSSVEPPASgsafgkPSFGTPSFG-SGNSSAEPPASGSAFGKPSF 607
Cdd:pfam15967 5 SFGGGPGSTATAGGGFSFGaaaaSNPGSTGGFSFGTLGAAPAAT------ATTTTATLGlGGGLFGQKPATGFTFGTPAS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 608 GTSAFGTAssnetnsGSIFGKAAFGSSSFApannelfGSNFTISKPTVD-SPKEVDSTSPFPSSGDQSEDESKSDVDSSS 686
Cdd:pfam15967 79 STAATGPT-------GLTLGTPAATTAAST-------GFSLGFNKPAASaTPFSLPASSTSGGGLSLGSVLTSTAAQQGA 144
|
170
....*....|....*....
gi 6322076 687 TPF----GTKPNTSTKPKT 701
Cdd:pfam15967 145 TGFtlnlGGTPATTTAVST 163
|
|
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
751-1006 |
4.40e-03 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 41.70 E-value: 4.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 751 TKDDTENGSLSKGSTSEINDDNEEHESNGPNVSGNDLTDSTVEQTSSTRLPETPSDedgevveeeaqkspigklTETIKK 830
Cdd:PRK08581 26 YADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFSTI------------------DSSTSD 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 831 SANIdmaglKNPVFGNHVKAKSESPF--SAFATNITKPSSTTPAFSFGNST--MNKSNTSTVSPMEEADTKETSEKGPIT 906
Cdd:PRK08581 88 SNNI-----IDFIYKNLPQTNINQLLtkNKYDDNYSLTTLIQNLFNLNSDIsdYEQPRNSEKSTNDSNKNSDSSIKNDTD 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322076 907 LKSVENPFLPAKEERTGESSKKDHNDDPKDGYVSGSEISVRTSESAFDTTANEEipKSQDVNNHEKSETDP---KYSQHA 983
Cdd:PRK08581 163 TQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPNQSNSQPASDDTANQKS--SSKDNQSMSDSALDSildQYSEDA 240
|
250 260
....*....|....*....|....*
gi 6322076 984 VVDHDN--KSKEMNETSKNNERSGQ 1006
Cdd:PRK08581 241 KKTQKDyaSQSKKDKTETSNTKNPQ 265
|
|
| |
