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Conserved domains on  [gi|6323273|ref|NP_013345|]
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methionine aminopeptidase MAP1 [Saccharomyces cerevisiae S288C]

Protein Classification

M24 family metallopeptidase( domain architecture ID 320)

M24 family metallopeptidase cleaves amido-, imido-, or amidino-containing bonds, exhibiting a fairly narrow substrate specificity compared to other metallo-aminopeptidases, possibly playing roles in regulation of biological processes

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
APP_MetAP super family cl00279
A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as ...
23-379 2.04e-166

A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.


The actual alignment was detected with superfamily member PLN03158:

Pssm-ID: 469704 [Multi-domain]  Cd Length: 396  Bit Score: 471.24  E-value: 2.04e-166
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    23 SGLQCGR-ETSSQMKCPVCLKQGI---VSIFCDTSCYENNYKAHKALHNAKDGLEGAY--------------------DP 78
Cdd:PLN03158   8 SPLACARcSKPAHLQCPKCLELKLpreGASFCSQDCFKAAWSSHKSVHTKAKLSSIGQnsdapaegwlyclkkgqartSK 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    79 FPKFKYSGKVKAsYPLTPRRYVPEDIPKPDWAANGLPVSEQRNDRLNNIPIYKKDQIKKIRKACMLGREVLDIAAAHVRP 158
Cdd:PLN03158  88 LPDFDWTGPLRP-YPISPRRVVPDHIPKPDWALDGTPKIEPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKP 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   159 GITTDELDEIVHNETIKRGAYPSPLNYYNFPKSLCTSVNEVICHGVPDKTVLKEGDIVNLDVSLYYQGYHADLNETYYVG 238
Cdd:PLN03158 167 GVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFVG 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   239 eNISKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATENKCSVVRTYCGHGVGEFFHCSPNIPHYAKNRTPGVM 318
Cdd:PLN03158 247 -NVDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGLSVVKSYCGHGIGELFHCAPNIPHYARNKAVGVM 325
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6323273   319 KPGMVFTIEPMINEGTWKDMTWPDDWTSTTQDGKLSAQFEHTLLVTEHGVEILTARNKKSP 379
Cdd:PLN03158 326 KAGQVFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTARLPSSP 386
 
Name Accession Description Interval E-value
PLN03158 PLN03158
methionine aminopeptidase; Provisional
23-379 2.04e-166

methionine aminopeptidase; Provisional


Pssm-ID: 215607 [Multi-domain]  Cd Length: 396  Bit Score: 471.24  E-value: 2.04e-166
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    23 SGLQCGR-ETSSQMKCPVCLKQGI---VSIFCDTSCYENNYKAHKALHNAKDGLEGAY--------------------DP 78
Cdd:PLN03158   8 SPLACARcSKPAHLQCPKCLELKLpreGASFCSQDCFKAAWSSHKSVHTKAKLSSIGQnsdapaegwlyclkkgqartSK 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    79 FPKFKYSGKVKAsYPLTPRRYVPEDIPKPDWAANGLPVSEQRNDRLNNIPIYKKDQIKKIRKACMLGREVLDIAAAHVRP 158
Cdd:PLN03158  88 LPDFDWTGPLRP-YPISPRRVVPDHIPKPDWALDGTPKIEPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKP 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   159 GITTDELDEIVHNETIKRGAYPSPLNYYNFPKSLCTSVNEVICHGVPDKTVLKEGDIVNLDVSLYYQGYHADLNETYYVG 238
Cdd:PLN03158 167 GVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFVG 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   239 eNISKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATENKCSVVRTYCGHGVGEFFHCSPNIPHYAKNRTPGVM 318
Cdd:PLN03158 247 -NVDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGLSVVKSYCGHGIGELFHCAPNIPHYARNKAVGVM 325
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6323273   319 KPGMVFTIEPMINEGTWKDMTWPDDWTSTTQDGKLSAQFEHTLLVTEHGVEILTARNKKSP 379
Cdd:PLN03158 326 KAGQVFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTARLPSSP 386
met_pdase_I TIGR00500
methionine aminopeptidase, type I; Methionine aminopeptidase is a cobalt-binding enzyme. ...
127-374 1.50e-148

methionine aminopeptidase, type I; Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine. [Protein fate, Protein modification and repair]


Pssm-ID: 129591 [Multi-domain]  Cd Length: 247  Bit Score: 420.22  E-value: 1.50e-148
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    127 IPIYKKDQIKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAYPSPLNYYNFPKSLCTSVNEVICHGVPD 206
Cdd:TIGR00500   1 ISLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    207 KTVLKEGDIVNLDVSLYYQGYHADLNETYYVGEnISKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATENKCS 286
Cdd:TIGR00500  81 KKVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGK-ISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFS 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    287 VVRTYCGHGVGEFFHCSPNIPHYAKNRTPGVMKPGMVFTIEPMINEGTWKDMTWPDDWTSTTQDGKLSAQFEHTLLVTEH 366
Cdd:TIGR00500 160 VVREYCGHGIGRKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITDN 239

                  ....*...
gi 6323273    367 GVEILTAR 374
Cdd:TIGR00500 240 GPEILTER 247
MetAP1 cd01086
Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and ...
135-372 3.08e-142

Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.


Pssm-ID: 238519 [Multi-domain]  Cd Length: 238  Bit Score: 403.80  E-value: 3.08e-142
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  135 IKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAYPSPLNYYNFPKSLCTSVNEVICHGVPDKTVLKEGD 214
Cdd:cd01086   1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGD 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  215 IVNLDVSLYYQGYHADLNETYYVGEnISKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATENKCSVVRTYCGH 294
Cdd:cd01086  81 IVNIDVGVELDGYHGDSARTFIVGE-VSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREFGGH 159
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6323273  295 GVGEFFHCSPNIPHYAKNRTPGVMKPGMVFTIEPMINEGTWKDMTWPDDWTSTTQDGKLSAQFEHTLLVTEHGVEILT 372
Cdd:cd01086 160 GIGRKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGPEILT 237
Map COG0024
Methionine aminopeptidase [Translation, ribosomal structure and biogenesis];
127-376 6.61e-132

Methionine aminopeptidase [Translation, ribosomal structure and biogenesis];


Pssm-ID: 439795 [Multi-domain]  Cd Length: 250  Bit Score: 377.81  E-value: 6.61e-132
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  127 IPIYKKDQIKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAYPSPLNYYNFPKSLCTSVNEVICHGVPD 206
Cdd:COG0024   1 IEIKTPEEIEKMREAGRIVAEVLDELAEAVKPGVTTLELDRIAEEFIRDHGAIPAFLGYYGFPKSICTSVNEVVVHGIPS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  207 KTVLKEGDIVNLDVSLYYQGYHADLNETYYVGEnISKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATENKCS 286
Cdd:COG0024  81 DRVLKDGDIVNIDVGAILDGYHGDSARTFVVGE-VSPEARRLVEVTEEALYAGIAAAKPGNRLGDIGHAIQSYAESNGYS 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  287 VVRTYCGHGVGEFFHCSPNIPHYAKNRTPGVMKPGMVFTIEPMINEGTWKDMTWPDDWTSTTQDGKLSAQFEHTLLVTEH 366
Cdd:COG0024 160 VVREFVGHGIGREMHEEPQVPNYGRPGRGPRLKPGMVLAIEPMINAGTPEVKVLDDGWTVVTKDGSLSAQFEHTVAVTED 239
                       250
                ....*....|
gi 6323273  367 GVEILTARNK 376
Cdd:COG0024 240 GPEILTLPDG 249
Peptidase_M24 pfam00557
Metallopeptidase family M24; This family contains metallopeptidases. It also contains ...
136-365 6.10e-61

Metallopeptidase family M24; This family contains metallopeptidases. It also contains non-peptidase homologs such as the N terminal domain of Spt16 which is a histone H3-H4 binding module.


Pssm-ID: 459852 [Multi-domain]  Cd Length: 208  Bit Score: 195.54  E-value: 6.10e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    136 KKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAYpsplNYYNFPKSLCTSVNEVICHGVPDKTVLKEGDI 215
Cdd:pfam00557   1 ELMRKAARIAAAALEAALAAIRPGVTERELAAELEAARLRRGGA----RGPAFPPIVASGPNAAIPHYIPNDRVLKPGDL 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    216 VNLDVSLYYQ-GYHADLNETYYVGEnISKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATENK-CSVVRTYCG 293
Cdd:pfam00557  77 VLIDVGAEYDgGYCSDITRTFVVGK-PSPEQRELYEAVLEAQEAAIAAVKPGVTGGDVDAAAREVLEEAGlGEYFPHGLG 155
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6323273    294 HGVGEFFHCSPNIPHyakNRTPGVMKPGMVFTIEPMINEgtwkdmtwpddwtsttQDGKLSAQFEHTLLVTE 365
Cdd:pfam00557 156 HGIGLEVHEGPYISR---GGDDRVLEPGMVFTIEPGIYF----------------IPGWGGVRIEDTVLVTE 208
 
Name Accession Description Interval E-value
PLN03158 PLN03158
methionine aminopeptidase; Provisional
23-379 2.04e-166

methionine aminopeptidase; Provisional


Pssm-ID: 215607 [Multi-domain]  Cd Length: 396  Bit Score: 471.24  E-value: 2.04e-166
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    23 SGLQCGR-ETSSQMKCPVCLKQGI---VSIFCDTSCYENNYKAHKALHNAKDGLEGAY--------------------DP 78
Cdd:PLN03158   8 SPLACARcSKPAHLQCPKCLELKLpreGASFCSQDCFKAAWSSHKSVHTKAKLSSIGQnsdapaegwlyclkkgqartSK 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    79 FPKFKYSGKVKAsYPLTPRRYVPEDIPKPDWAANGLPVSEQRNDRLNNIPIYKKDQIKKIRKACMLGREVLDIAAAHVRP 158
Cdd:PLN03158  88 LPDFDWTGPLRP-YPISPRRVVPDHIPKPDWALDGTPKIEPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKP 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   159 GITTDELDEIVHNETIKRGAYPSPLNYYNFPKSLCTSVNEVICHGVPDKTVLKEGDIVNLDVSLYYQGYHADLNETYYVG 238
Cdd:PLN03158 167 GVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFVG 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   239 eNISKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATENKCSVVRTYCGHGVGEFFHCSPNIPHYAKNRTPGVM 318
Cdd:PLN03158 247 -NVDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGLSVVKSYCGHGIGELFHCAPNIPHYARNKAVGVM 325
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6323273   319 KPGMVFTIEPMINEGTWKDMTWPDDWTSTTQDGKLSAQFEHTLLVTEHGVEILTARNKKSP 379
Cdd:PLN03158 326 KAGQVFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTARLPSSP 386
met_pdase_I TIGR00500
methionine aminopeptidase, type I; Methionine aminopeptidase is a cobalt-binding enzyme. ...
127-374 1.50e-148

methionine aminopeptidase, type I; Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine. [Protein fate, Protein modification and repair]


Pssm-ID: 129591 [Multi-domain]  Cd Length: 247  Bit Score: 420.22  E-value: 1.50e-148
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    127 IPIYKKDQIKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAYPSPLNYYNFPKSLCTSVNEVICHGVPD 206
Cdd:TIGR00500   1 ISLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    207 KTVLKEGDIVNLDVSLYYQGYHADLNETYYVGEnISKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATENKCS 286
Cdd:TIGR00500  81 KKVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGK-ISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFS 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    287 VVRTYCGHGVGEFFHCSPNIPHYAKNRTPGVMKPGMVFTIEPMINEGTWKDMTWPDDWTSTTQDGKLSAQFEHTLLVTEH 366
Cdd:TIGR00500 160 VVREYCGHGIGRKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITDN 239

                  ....*...
gi 6323273    367 GVEILTAR 374
Cdd:TIGR00500 240 GPEILTER 247
MetAP1 cd01086
Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and ...
135-372 3.08e-142

Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.


Pssm-ID: 238519 [Multi-domain]  Cd Length: 238  Bit Score: 403.80  E-value: 3.08e-142
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  135 IKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAYPSPLNYYNFPKSLCTSVNEVICHGVPDKTVLKEGD 214
Cdd:cd01086   1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGD 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  215 IVNLDVSLYYQGYHADLNETYYVGEnISKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATENKCSVVRTYCGH 294
Cdd:cd01086  81 IVNIDVGVELDGYHGDSARTFIVGE-VSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREFGGH 159
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 6323273  295 GVGEFFHCSPNIPHYAKNRTPGVMKPGMVFTIEPMINEGTWKDMTWPDDWTSTTQDGKLSAQFEHTLLVTEHGVEILT 372
Cdd:cd01086 160 GIGRKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGPEILT 237
Map COG0024
Methionine aminopeptidase [Translation, ribosomal structure and biogenesis];
127-376 6.61e-132

Methionine aminopeptidase [Translation, ribosomal structure and biogenesis];


Pssm-ID: 439795 [Multi-domain]  Cd Length: 250  Bit Score: 377.81  E-value: 6.61e-132
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  127 IPIYKKDQIKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAYPSPLNYYNFPKSLCTSVNEVICHGVPD 206
Cdd:COG0024   1 IEIKTPEEIEKMREAGRIVAEVLDELAEAVKPGVTTLELDRIAEEFIRDHGAIPAFLGYYGFPKSICTSVNEVVVHGIPS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  207 KTVLKEGDIVNLDVSLYYQGYHADLNETYYVGEnISKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATENKCS 286
Cdd:COG0024  81 DRVLKDGDIVNIDVGAILDGYHGDSARTFVVGE-VSPEARRLVEVTEEALYAGIAAAKPGNRLGDIGHAIQSYAESNGYS 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  287 VVRTYCGHGVGEFFHCSPNIPHYAKNRTPGVMKPGMVFTIEPMINEGTWKDMTWPDDWTSTTQDGKLSAQFEHTLLVTEH 366
Cdd:COG0024 160 VVREFVGHGIGREMHEEPQVPNYGRPGRGPRLKPGMVLAIEPMINAGTPEVKVLDDGWTVVTKDGSLSAQFEHTVAVTED 239
                       250
                ....*....|
gi 6323273  367 GVEILTARNK 376
Cdd:COG0024 240 GPEILTLPDG 249
PRK05716 PRK05716
methionine aminopeptidase; Validated
127-377 2.37e-129

methionine aminopeptidase; Validated


Pssm-ID: 235576 [Multi-domain]  Cd Length: 252  Bit Score: 371.39  E-value: 2.37e-129
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   127 IPIYKKDQIKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAYPSPLNYYNFPKSLCTSVNEVICHGVPD 206
Cdd:PRK05716   3 ITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIPS 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   207 KTVLKEGDIVNLDVSLYYQGYHADLNETYYVGEnISKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATENKCS 286
Cdd:PRK05716  83 DKVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGE-ISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFS 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   287 VVRTYCGHGVGEFFHCSPNIPHYAKNRTPGVMKPGMVFTIEPMINEGTWKDMTWPDDWTSTTQDGKLSAQFEHTLLVTEH 366
Cdd:PRK05716 162 VVREYCGHGIGRKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTED 241
                        250
                 ....*....|.
gi 6323273   367 GVEILTARNKK 377
Cdd:PRK05716 242 GPEILTLRPEE 252
PRK12896 PRK12896
methionine aminopeptidase; Reviewed
133-374 9.71e-96

methionine aminopeptidase; Reviewed


Pssm-ID: 237252 [Multi-domain]  Cd Length: 255  Bit Score: 286.35  E-value: 9.71e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   133 DQIKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAYPSPLNYYNFPKSLCTSVNEVICHGVPDKTVLKE 212
Cdd:PRK12896  14 RELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEEVAHGIPGPRVIKD 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   213 GDIVNLDVSLYYQGYHADLNETYYVGeNISKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATENKCSVVRTYC 292
Cdd:PRK12896  94 GDLVNIDVSAYLDGYHGDTGITFAVG-PVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGYSVVRDLT 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   293 GHGVGEFFHCSPN-IPHYAKNRTPGVMKPGMVFTIEPMINEGTWKDMTWPDDWTSTTQDGKLSAQFEHTLLVTEHGVEIL 371
Cdd:PRK12896 173 GHGVGRSLHEEPSvILTYTDPLPNRLLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVVTRDGPEIL 252

                 ...
gi 6323273   372 TAR 374
Cdd:PRK12896 253 TDR 255
PRK12318 PRK12318
methionyl aminopeptidase;
126-376 4.99e-78

methionyl aminopeptidase;


Pssm-ID: 183434 [Multi-domain]  Cd Length: 291  Bit Score: 242.42  E-value: 4.99e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   126 NIPIYKKDQIKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAYPSPLNYYN--FPKSLCTSVNEVICHG 203
Cdd:PRK12318  40 DIIIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIPAPLNYGSppFPKTICTSLNEVICHG 119
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   204 VPDKTVLKEGDIVNLDVSLYYQGYHADLNETYYVGEnISKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATEN 283
Cdd:PRK12318 120 IPNDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGE-VSEIKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKY 198
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   284 KCSVVRTYCGHGVGEFFHCSPNIPHYaKNRTPGVMKPGMVFTIEPMINEGTWKDMTWPDD-WTSTTQDGKLSAQFEHTLL 362
Cdd:PRK12318 199 GFSVVDQFVGHGVGIKFHENPYVPHH-RNSSKIPLAPGMIFTIEPMINVGKKEGVIDPINhWEARTCDNQPSAQWEHTIL 277
                        250
                 ....*....|....
gi 6323273   363 VTEHGVEILTARNK 376
Cdd:PRK12318 278 ITETGYEILTLLDK 291
Peptidase_M24 pfam00557
Metallopeptidase family M24; This family contains metallopeptidases. It also contains ...
136-365 6.10e-61

Metallopeptidase family M24; This family contains metallopeptidases. It also contains non-peptidase homologs such as the N terminal domain of Spt16 which is a histone H3-H4 binding module.


Pssm-ID: 459852 [Multi-domain]  Cd Length: 208  Bit Score: 195.54  E-value: 6.10e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    136 KKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAYpsplNYYNFPKSLCTSVNEVICHGVPDKTVLKEGDI 215
Cdd:pfam00557   1 ELMRKAARIAAAALEAALAAIRPGVTERELAAELEAARLRRGGA----RGPAFPPIVASGPNAAIPHYIPNDRVLKPGDL 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    216 VNLDVSLYYQ-GYHADLNETYYVGEnISKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATENK-CSVVRTYCG 293
Cdd:pfam00557  77 VLIDVGAEYDgGYCSDITRTFVVGK-PSPEQRELYEAVLEAQEAAIAAVKPGVTGGDVDAAAREVLEEAGlGEYFPHGLG 155
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6323273    294 HGVGEFFHCSPNIPHyakNRTPGVMKPGMVFTIEPMINEgtwkdmtwpddwtsttQDGKLSAQFEHTLLVTE 365
Cdd:pfam00557 156 HGIGLEVHEGPYISR---GGDDRVLEPGMVFTIEPGIYF----------------IPGWGGVRIEDTVLVTE 208
PRK12897 PRK12897
type I methionyl aminopeptidase;
127-372 7.63e-44

type I methionyl aminopeptidase;


Pssm-ID: 171806  Cd Length: 248  Bit Score: 152.50  E-value: 7.63e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   127 IPIYKKDQIKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAYPSPLNYYNFPKSLCTSVNEVICHGVPD 206
Cdd:PRK12897   2 ITIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDEMCHAFPA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   207 KTVLKEGDIVNLDVSLYYQGYHADLNETYYVGeNISKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATENKCS 286
Cdd:PRK12897  82 DVPLTEGDIVTIDMVVNLNGGLSDSAWTYRVG-KVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   287 VVRTYCGHGVGEFFHCSPNIPHYAKNRTPGVMKPGMVFTIEPMINEGTWKDMTWPDDWTSTTQDGKLSAQFEHTLLVTEH 366
Cdd:PRK12897 161 VARDFTGHGIGKEIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITKD 240

                 ....*.
gi 6323273   367 GVEILT 372
Cdd:PRK12897 241 GPIILT 246
APP_MetAP cd01066
A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as ...
135-367 8.08e-40

A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.


Pssm-ID: 238514 [Multi-domain]  Cd Length: 207  Bit Score: 140.67  E-value: 8.08e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  135 IKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAYPSPLNyynfpkslCTSVNEV--ICHGVPDKTVLKE 212
Cdd:cd01066   1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGGYPAGPT--------IVGSGARtaLPHYRPDDRRLQE 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  213 GDIVNLDVSLYYQGYHADLNETYYVGENiSKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATENKCSVVRT-Y 291
Cdd:cd01066  73 GDLVLVDLGGVYDGYHADLTRTFVIGEP-SDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGhR 151
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 6323273  292 CGHGVGEFFHCSPniphYAKNRTPGVMKPGMVFTIEPMINEgtwkdmtwpddwtsttqDGKLSAQFEHTLLVTEHG 367
Cdd:cd01066 152 TGHGIGLEIHEPP----VLKAGDDTVLEPGMVFAVEPGLYL-----------------PGGGGVRIEDTVLVTEDG 206
PRK07281 PRK07281
methionyl aminopeptidase;
156-374 1.11e-36

methionyl aminopeptidase;


Pssm-ID: 180918  Cd Length: 286  Bit Score: 134.59  E-value: 1.11e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   156 VRPGITTDELDEIVHNETIKRGAYPSPL----NYYNFPKSLCTSVNEVICHGVPDKTVLKEGDIVNLDVSL--------- 222
Cdd:PRK07281  31 IKPGVDMWEVEEYVRRRCKEENVLPLQIgvdgAMMDYPYATCCGLNDEVAHAFPRHYILKEGDLLKVDMVLsepldksiv 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   223 ------------------YYQGYHADLNETYYVGEnISKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATENK 284
Cdd:PRK07281 111 dvsklnfdnveqmkkyteSYRGGLADSCWAYAVGT-PSDEVKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRG 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   285 CSVVRTYCGHGVGEFFHCSPNIPHYAKNRTPGVMKPGMVFTIEPMINEGTWK-DMTWPDDWTSTTQDGKLSAQFEHTLLV 363
Cdd:PRK07281 190 YGVVRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTIEPMINTGTWEiDTDMKTGWAHKTLDGGLSCQYEHQFVI 269
                        250
                 ....*....|.
gi 6323273   364 TEHGVEILTAR 374
Cdd:PRK07281 270 TKDGPVILTSQ 280
PepP COG0006
Xaa-Pro aminopeptidase [Amino acid transport and metabolism];
133-373 1.70e-33

Xaa-Pro aminopeptidase [Amino acid transport and metabolism];


Pssm-ID: 439777 [Multi-domain]  Cd Length: 299  Bit Score: 126.47  E-value: 1.70e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  133 DQIKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAypsplNYYNFPKSLCTSVNEVICHGVPDKTVLKE 212
Cdd:COG0006  77 EEIELMRKAARIADAAHEAALAALRPGVTEREVAAELEAAMRRRGA-----EGPSFDTIVASGENAAIPHYTPTDRPLKP 151
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  213 GDIVNLDVSLYYQGYHADLNETYYVGEnISKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATENKcsvVRTY- 291
Cdd:COG0006 152 GDLVLIDAGAEYDGYTSDITRTVAVGE-PSDEQREIYEAVLEAQEAAIAALKPGVTGGEVDAAARDVLAEAG---YGEYf 227
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  292 ---CGHGVGEFFHCSPNIphYAKNRTPgvMKPGMVFTIEPMInegtwkdmtwpddwtstTQDGKLSAQFEHTLLVTEHGV 368
Cdd:COG0006 228 phgTGHGVGLDVHEGPQI--SPGNDRP--LEPGMVFTIEPGI-----------------YIPGIGGVRIEDTVLVTEDGA 286

                ....*
gi 6323273  369 EILTA 373
Cdd:COG0006 287 EVLTR 291
APP-like cd01092
Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse ...
135-330 6.84e-30

Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.


Pssm-ID: 238525 [Multi-domain]  Cd Length: 208  Bit Score: 114.14  E-value: 6.84e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  135 IKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAY-PSplnyynFPKSLCTSVNEVICHGVPDKTVLKEG 213
Cdd:cd01092   1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEgPS------FDTIVASGPNSALPHGVPSDRKIEEG 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  214 DIVNLDVSLYYQGYHADLNETYYVGEnISKEALNTTETSRECLKLAIKMCKPGTTFQELgDH-----IEK--------HA 280
Cdd:cd01092  75 DLVLIDFGAIYDGYCSDITRTVAVGE-PSDELKEIYEIVLEAQQAAIKAVKPGVTAKEV-DKaardvIEEagygeyfiHR 152
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|
gi 6323273  281 TenkcsvvrtycGHGVGEFFHCSPNIPHYAKnrtpGVMKPGMVFTIEPMI 330
Cdd:cd01092 153 T-----------GHGVGLEVHEAPYISPGSD----DVLEEGMVFTIEPGI 187
MetAP2 cd01088
Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and ...
135-373 7.80e-28

Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.


Pssm-ID: 238521 [Multi-domain]  Cd Length: 291  Bit Score: 110.80  E-value: 7.80e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  135 IKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAYPSplnyynFPKSLctSVNEVICHGVP---DKTVLK 211
Cdd:cd01088   1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGPA------FPVNL--SINECAAHYTPnagDDTVLK 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  212 EGDIVNLDVSLYYQGYHADLNETYYVGENI------SKEALNTtetsreclklAIKMCKPGTTFQELGDHIEKHATENKC 285
Cdd:cd01088  73 EGDVVKLDFGAHVDGYIADSAFTVDFDPKYddlleaAKEALNA----------AIKEAGPDVRLGEIGEAIEEVIESYGF 142
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  286 SVVRTYCGHGVGEF-FHCSPNIPHYaKNRTPGVMKPGMVFTIEP-------MINEGTW-------KDMT----------- 339
Cdd:cd01088 143 KPIRNLTGHSIERYrLHAGKSIPNV-KGGEGTRLEEGDVYAIEPfattgkgYVHDGPEcsiymlnRDKPlrlprarklld 221
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  340 --------------WPDDWTSTT----------------------QDGKLSAQFEHTLLVTEHGVEILTA 373
Cdd:cd01088 222 viyenfgtlpfarrWLDRLGETKllmalknlckagivypypvlkeISGGYVAQFEHTIIVREDGKEVTTR 291
met_pdase_II TIGR00501
methionine aminopeptidase, type II; Methionine aminopeptidase (map) is a cobalt-binding enzyme. ...
135-372 4.41e-25

methionine aminopeptidase, type II; Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation. [Protein fate, Protein modification and repair]


Pssm-ID: 129592  Cd Length: 295  Bit Score: 103.33  E-value: 4.41e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    135 IKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAYPSplnyynFPKSLctSVNEVICHGVP---DKTVLK 211
Cdd:TIGR00501   5 AEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEPA------FPCNI--SINECAAHFTPkagDKTVFK 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    212 EGDIVNLDVSLYYQGYHADLNETYYVGENISkealNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATENKCSVVRTY 291
Cdd:TIGR00501  77 DGDVVKLDLGAHVDGYIADTAITVDLGDQYD----NLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPISNL 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    292 CGHGVGEF-FHCSPNIPHYaKNRTPGVMKPGMVFTIEPMINEG-----------------------------------TW 335
Cdd:TIGR00501 153 TGHSMAPYrLHGGKSIPNV-KERDTTKLEEGDVVAIEPFATDGvgyvtdggevsiyaflaerpvrldsarnllktideNY 231
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6323273    336 KDMTWPDDWTSTTQD--------------------------GKLSAQFEHTLLVTEHGVEILT 372
Cdd:TIGR00501 232 GTLPFARRWLDKLGDekylfalnnlirhgliydypvlneisGGYVAQWEHTILVEEHGKEVTT 294
zf-C6H2 pfam15801
zf-MYND-like zinc finger, mRNA-binding; zf-C6H2 is an unusual zinc-finger similar to zf-MYND, ...
22-66 9.49e-17

zf-MYND-like zinc finger, mRNA-binding; zf-C6H2 is an unusual zinc-finger similar to zf-MYND, pfam01753.This zinc-finger is found at the N-terminus of Pfam families Exo_endo_phos pfam03372 and Peptidase_M24 pfam00557. The domain is missing in prokaryotic methionine aminopeptidases, and is a unique type of zinc-finger domain. It consists of a C2-C2 zinc-finger motif similar to the RING finger family followed by a C2H2 motif similar to zinc-fingers involved in RNA-binding. In yeast the domain chelates zinc in a 2:1 ratio. The domain is found in yeast, plants and mammals. The domain is necessary for the association of the methionine aminopeptidase with the ribosome and the normal processing of the peptidase.


Pssm-ID: 464880 [Multi-domain]  Cd Length: 46  Bit Score: 73.42  E-value: 9.49e-17
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 6323273     22 CSGLQCGRETSSqMKCPVCLKQGI-VSIFCDTSCYENNYKAHKALH 66
Cdd:pfam15801   1 CAGPGCGKEASS-LQCPTCLKLGIkGSFFCSQDCFKKNWKSHKAIH 45
Prolidase cd01087
Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline ...
135-373 1.72e-13

Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.


Pssm-ID: 238520 [Multi-domain]  Cd Length: 243  Bit Score: 69.52  E-value: 1.72e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  135 IKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAYPSplnyYNFPkSLCTSvNEVICHGVPDKTVLKEGD 214
Cdd:cd01087   1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARLA----YSYI-VAAGS-NAAILHYVHNDQPLKDGD 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  215 IVNLDVSLYYQGYHADLNETYYVGENISKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATEN----------- 283
Cdd:cd01087  75 LVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGlkelgilkgdv 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  284 ----KCSVVRTYCGHGVGEFF----HCSPNIPHYakNRTPGVMKPGMVFTIEP---MINEGTWKDMTWP-------DDwt 345
Cdd:cd01087 155 deivESGAYAKFFPHGLGHYLgldvHDVGGYLRY--LRRARPLEPGMVITIEPgiyFIPDLLDVPEYFRgggirieDD-- 230
                       250       260
                ....*....|....*....|....*...
gi 6323273  346 sttqdgklsaqfehtLLVTEHGVEILTA 373
Cdd:cd01087 231 ---------------VLVTEDGPENLTR 243
PRK10879 PRK10879
proline aminopeptidase P II; Provisional
146-379 1.37e-12

proline aminopeptidase P II; Provisional


Pssm-ID: 182804 [Multi-domain]  Cd Length: 438  Bit Score: 68.60  E-value: 1.37e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   146 REVLDIAA-AHVR------PGITTDELDEIVHNETIKRGA-YPSplnyYNfpkslcTSV----NEVICHGVPDKTVLKEG 213
Cdd:PRK10879 183 RRAGEISAlAHTRamekcrPGMFEYQLEGEIHHEFNRHGArYPS----YN------TIVgsgeNGCILHYTENESEMRDG 252
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   214 DIVNLDVSLYYQGYHADLNETYYVGENISKEALNTTETSRECLKLAIKMCKPGTTFQELGDH------------------ 275
Cdd:PRK10879 253 DLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLYRPGTSIREVTGEvvrimvsglvklgilkgd 332
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   276 IEKHATENKcsvVRTYCGHGVGEFF----HcspNIPHYAKNRTPgVMKPGMVFTIEPMINEGTWKDMtwPDDWTSttqdg 351
Cdd:PRK10879 333 VDQLIAENA---HRPFFMHGLSHWLgldvH---DVGVYGQDRSR-ILEPGMVLTVEPGLYIAPDADV--PEQYRG----- 398
                        250       260
                 ....*....|....*....|....*...
gi 6323273   352 kLSAQFEHTLLVTEHGVEILTARNKKSP 379
Cdd:PRK10879 399 -IGIRIEDDIVITETGNENLTASVVKKP 425
PA2G4-like cd01089
Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family ...
137-373 1.73e-12

Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.


Pssm-ID: 238522  Cd Length: 228  Bit Score: 66.20  E-value: 1.73e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  137 KIRKACMLGREVLDIAAAHVRPGITTDEL----DEIVHNET---------IKRG-AYPSplnyynfpkslCTSVNEVICH 202
Cdd:cd01089   3 KYKTAGQIANKVLKQVISLCVPGAKVVDLcekgDKLILEELgkvykkekkLEKGiAFPT-----------CISVNNCVCH 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  203 GVPDK----TVLKEGDIVNLDVSLYYQGYHADLNETYYVGE----NISKEALNTTETSRECLKLAIKMCKPGTTFQELGD 274
Cdd:cd01089  72 FSPLKsdatYTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAeaetPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITE 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  275 HIEKHATENKCSVVRTYCGHGVGEFFHCSPNiphyaKNRTPGVMKPGMVFTIEPMInegtwkdmtwpddwtstTQDGKLS 354
Cdd:cd01089 152 AIQKVIVDYGCTPVEGVLSHQLKRVVSSGEG-----KAKLVECVKHGLLFPYPVLY-----------------EKEGEVV 209
                       250
                ....*....|....*....
gi 6323273  355 AQFEHTLLVTEHGVEILTA 373
Cdd:cd01089 210 AQFKLTVLLTPNGVTVLTG 228
crvDNA_42K TIGR00495
42K curved DNA binding protein; Proteins identified by this model have been identified in a ...
135-294 4.91e-10

42K curved DNA binding protein; Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein. [Unknown function, General]


Pssm-ID: 273105  Cd Length: 390  Bit Score: 60.67  E-value: 4.91e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    135 IKKIRKACMLGREVLDIAaahvrpgittDELDEIVHNETIKrgAYPSPLNYYN---FPKslCTSVNEVICHGVPDKT--- 208
Cdd:TIGR00495  34 LKSVVEACSPGAKVVDIC----------EKGDAFIMEETAK--IFKKEKEMEKgiaFPT--CISVNNCVGHFSPLKSdqd 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    209 -VLKEGDIVNLDVSLYYQGYHADLNETYYVG----ENISKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATEN 283
Cdd:TIGR00495 100 yILKEGDVVKIDLGCHIDGFIALVAHTFVVGvaqeEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQVTEAINKVAHSY 179
                         170
                  ....*....|.
gi 6323273    284 KCSVVRTYCGH 294
Cdd:TIGR00495 180 GCTPVEGMLSH 190
PRK09795 PRK09795
aminopeptidase; Provisional
129-376 5.36e-09

aminopeptidase; Provisional


Pssm-ID: 182080 [Multi-domain]  Cd Length: 361  Bit Score: 57.25  E-value: 5.36e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   129 IYKKDQIKKIRKACmlgrEVLDIAAAHVR----PGITTDELDEIVHNETIKRGAYPSplnyyNFPKSLCTSVNEVICHGV 204
Cdd:PRK09795 127 IKTPEEVEKIRLAC----GIADRGAEHIRrfiqAGMSEREIAAELEWFMRQQGAEKA-----SFDTIVASGWRGALPHGK 197
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   205 PDKTVLKEGDIVNLDVSLYYQGYHADLNETYYV-GENISKEA---LNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHA 280
Cdd:PRK09795 198 ASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVnGEGVSAEShplFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVI 277
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   281 TENKCSVVRTY-CGHGVGEFFHCSPNIphyaKNRTPGVMKPGMVFTIEPMInegtwkdmtwpddwtstTQDGKLSAQFEH 359
Cdd:PRK09795 278 TEAGYGDYFGHnTGHAIGIEVHEDPRF----SPRDTTTLQPGMLLTVEPGI-----------------YLPGQGGVRIED 336
                        250
                 ....*....|....*..
gi 6323273   360 TLLVTEHGVEILTARNK 376
Cdd:PRK09795 337 VVLVTPQGAEVLYAMPK 353
PTZ00053 PTZ00053
methionine aminopeptidase 2; Provisional
60-327 9.07e-07

methionine aminopeptidase 2; Provisional


Pssm-ID: 240246 [Multi-domain]  Cd Length: 470  Bit Score: 50.48  E-value: 9.07e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273    60 KAHKALHNAKDGLEGAYDPFPKFKYSGKVKASYPLT----PRRYVPEDIPKPdwaangLPVSEQRNDR---LNNIPIYKK 132
Cdd:PTZ00053  63 KKKKKKKNLGEAYDLAYDLPVVWSSAAFQDNSHIRKlgnwPEQEWKQTQPPT------IPVSKQFKDGeypVGEIQEYPG 136
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   133 D-------------------QIKKIRKACMLGREVLDIAAAHVRPGIT----TDELD----EIVHNETIKRGaypsplny 185
Cdd:PTZ00053 137 EnssrtsseekreleklseeQYQDLRRAAEVHRQVRRYAQSVIKPGVKlidiCERIEsksrELIEADGLKCG-------- 208
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   186 YNFPKSLctSVNEVICHGVP---DKTVLKEGDIVNLDVSLYYQGYHAD------LNETYYVGENISKEALNTTetsrecL 256
Cdd:PTZ00053 209 WAFPTGC--SLNHCAAHYTPntgDKTVLTYDDVCKLDFGTHVNGRIIDcaftvaFNPKYDPLLQATKDATNTG------I 280
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   257 KLA---IKMCKPGTTFQELgdhIEKHATENKCSV-----VRTYCGHGVGEF-FHCSPNIPHYAKNRTpGVMKPGMVFTIE 327
Cdd:PTZ00053 281 KEAgidVRLSDIGAAIQEV---IESYEVEIKGKTypiksIRNLNGHSIGPYiIHGGKSVPIVKGGEN-TRMEEGELFAIE 356
PRK14576 PRK14576
putative endopeptidase; Provisional
134-376 9.53e-07

putative endopeptidase; Provisional


Pssm-ID: 173040 [Multi-domain]  Cd Length: 405  Bit Score: 50.40  E-value: 9.53e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   134 QIKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIkrgAYPSPlnyyNFPKSLCTSVNEVICHGV-PDKTVLKE 212
Cdd:PRK14576 182 EIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVM---SFPET----NFSRFNLISVGDNFSPKIiADTTPAKV 254
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   213 GDIVNLDVSLYYQGYHADLNETYYVGE--NISKEALNTTETSRECLklaIKMCKPGTTFQELGDH-IEKHATENKCSVVR 289
Cdd:PRK14576 255 GDLIKFDCGIDVAGYGADLARTFVLGEpdKLTQQIYDTIRTGHEHM---LSMVAPGVKLKAVFDStMAVIKTSGLPHYNR 331
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   290 TYCGHGVGEFFHCSPniPHYAKNRTPGVMKPGMVFTIEpminegtwkdmtwpddwTSTTQDGKLSAQFEHTLLVTEHGVE 369
Cdd:PRK14576 332 GHLGHGDGVFLGLEE--VPFVSTQATETFCPGMVLSLE-----------------TPYYGIGVGSIMLEDMILITDSGFE 392

                 ....*..
gi 6323273   370 ILTARNK 376
Cdd:PRK14576 393 FLSKLDR 399
PRK15173 PRK15173
peptidase; Provisional
134-327 1.47e-05

peptidase; Provisional


Pssm-ID: 185095 [Multi-domain]  Cd Length: 323  Bit Score: 46.63  E-value: 1.47e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   134 QIKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRgaypSPLNYYNFpkSLCTSVNEVICHGVPDKTVLKEG 213
Cdd:PRK15173 100 EIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSK----SETHFSRF--HLISVGADFSPKLIPSNTKACSG 173
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   214 DIVNLDVSLYYQGYHADLNETYYVGE--NISKEALNTTETSRECLklaIKMCKPGTTFQELGDH----IEKHATENkcsV 287
Cdd:PRK15173 174 DLIKFDCGVDVDGYGADIARTFVVGEppEITRKIYQTIRTGHEHM---LSMVAPGVKMKDVFDStmevIKKSGLPN---Y 247
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 6323273   288 VRTYCGHGVGEFFHC--SPNIPHYAKNRtpgvMKPGMVFTIE 327
Cdd:PRK15173 248 NRGHLGHGNGVFLGLeeSPFVSTHATES----FTSGMVLSLE 285
PRK14575 PRK14575
putative peptidase; Provisional
134-327 2.63e-05

putative peptidase; Provisional


Pssm-ID: 173039 [Multi-domain]  Cd Length: 406  Bit Score: 45.85  E-value: 2.63e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   134 QIKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRgaypSPLNYYNFpkSLCTSVNEVICHGVPDKTVLKEG 213
Cdd:PRK14575 183 EIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSK----SETHFSRF--HLISVGADFSPKLIPSNTKACSG 256
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273   214 DIVNLDVSLYYQGYHADLNETYYVGE--NISKEALNTTETSRECLklaIKMCKPGTTFQELGDH----IEKHATENkcsV 287
Cdd:PRK14575 257 DLIKFDCGVDVDGYGADIARTFVVGEppEITRKIYQTIRTGHEHM---LSMVAPGVKMKDVFDStmevIKKSGLPN---Y 330
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 6323273   288 VRTYCGHGVGEFFHC--SPNIPHYAKNRtpgvMKPGMVFTIE 327
Cdd:PRK14575 331 NRGHLGHGNGVFLGLeeSPFVSTHATES----FTSGMVLSLE 368
Creatinase cd01090
Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
209-330 2.27e-04

Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.


Pssm-ID: 238523 [Multi-domain]  Cd Length: 228  Bit Score: 42.14  E-value: 2.27e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323273  209 VLKEGDIVNLDVSLYYQGYHADLNETYYVGEnISKEALNTTETSRECLKLAIKMCKPGTTFQELGDHIEKHATENKCSVV 288
Cdd:cd01090  76 KVQRGDILSLNCFPMIAGYYTALERTLFLDE-VSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRY 154
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 6323273  289 RTY-CGHGVGEFFHcspnipHYAknRTPG---------VMKPGMVFTIEPMI 330
Cdd:cd01090 155 RTFgYGHSFGVLSH------YYG--REAGlelredidtVLEPGMVVSMEPMI 198
APP cd01085
X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline ...
293-328 2.24e-03

X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.


Pssm-ID: 238518 [Multi-domain]  Cd Length: 224  Bit Score: 39.08  E-value: 2.24e-03
                        10        20        30
                ....*....|....*....|....*....|....*...
gi 6323273  293 GHGVGEFF--HCSPNIPHYAKNRTPgvMKPGMVFTIEP 328
Cdd:cd01085 161 GHGVGSFLnvHEGPQSISPAPNNVP--LKAGMILSNEP 196
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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