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Conserved domains on  [gi|398366279|ref|NP_013541|]
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Dif1p [Saccharomyces cerevisiae S288C]

Protein Classification

RNR_inhib superfamily-containing protein( domain architecture ID 15195)

RNR_inhib superfamily-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
RNR_inhib super family cl07271
Ribonucleotide reductase inhibitor; This family includes S. pombe Spd1. Spd1p inhibits fission ...
 38-66 1.31e-03

Ribonucleotide reductase inhibitor; This family includes S. pombe Spd1. Spd1p inhibits fission yeast RNR activity by interacting with the Cdc22p.


The actual alignment was detected with superfamily member pfam08591:

Pssm-ID: 430095  Cd Length: 101  Bit Score: 35.88  E-value: 1.31e-03
                          10        20
                  ....*....|....*....|....*....
gi 398366279   38 QLMTVGMRIRQRVDQGYasRTPSTSDASL 66
Cdd:pfam08591   1 SLLSVGMRVRKSVPEGY--KTGSYSAFKL 27
 
Name Accession Description Interval E-value
RNR_inhib pfam08591
Ribonucleotide reductase inhibitor; This family includes S. pombe Spd1. Spd1p inhibits fission ...
 38-66 1.31e-03

Ribonucleotide reductase inhibitor; This family includes S. pombe Spd1. Spd1p inhibits fission yeast RNR activity by interacting with the Cdc22p.


Pssm-ID: 430095  Cd Length: 101  Bit Score: 35.88  E-value: 1.31e-03
                          10        20
                  ....*....|....*....|....*....
gi 398366279   38 QLMTVGMRIRQRVDQGYasRTPSTSDASL 66
Cdd:pfam08591   1 SLLSVGMRVRKSVPEGY--KTGSYSAFKL 27
 
Name Accession Description Interval E-value
RNR_inhib pfam08591
Ribonucleotide reductase inhibitor; This family includes S. pombe Spd1. Spd1p inhibits fission ...
 38-66 1.31e-03

Ribonucleotide reductase inhibitor; This family includes S. pombe Spd1. Spd1p inhibits fission yeast RNR activity by interacting with the Cdc22p.


Pssm-ID: 430095  Cd Length: 101  Bit Score: 35.88  E-value: 1.31e-03
                          10        20
                  ....*....|....*....|....*....
gi 398366279   38 QLMTVGMRIRQRVDQGYasRTPSTSDASL 66
Cdd:pfam08591   1 SLLSVGMRVRKSVPEGY--KTGSYSAFKL 27
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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