NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|9630017|ref|NP_046235|]
View 

hypothetical protein OpmnVgp079 [Orgyia pseudotsugata multiple nucleopolyhedrovirus]

Protein Classification

AC76 family protein( domain architecture ID 10530724)

AC76 family protein similar to Autographa californica nucleopolyhedrovirus protein Ac76 (Orf76) that participates in intranuclear microvesicle formation, ODV envelopment, and subsequent embedding of virions into occlusion bodies

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
Ac76 pfam05814
Orf76 (Ac76); This family consists mainly of baculovirus proteins. Family members include ...
 1-82 3.11e-21

Orf76 (Ac76); This family consists mainly of baculovirus proteins. Family members include Autographa californica multiple nucleopolyhedrovirus (AcMNPV), protein AC76. Ac76 has been shown to be involved in intranuclear microvesicle formation. Functional studies suggest that ac76 is essential for both BV (budded virus) and ODV (occlusion-derived virus) development but is not required for viral DNA synthesis.


:

Pssm-ID: 114536  Cd Length: 83  Bit Score: 79.26  E-value: 3.11e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9630017     1 MHLYLLLGALAVFSLVYDKKENG---IVFYFLILVLVFVLISPAFIskNTESAANDLPSHKAKSVRKKLEIEQALDAILN 77
Cdd:pfam05814  1 MLIYFLFIALIVLAFIFDKNEGSselILTLLVLFVLFFCLLNVYYI--NTESTPADLYTEKAKKIKKKQDLEDAFDAILN 78


                 ....*
gi 9630017    78 KNTSS 82
Cdd:pfam05814 79 KNNSS 83
 
Name Accession Description Interval E-value
Ac76 pfam05814
Orf76 (Ac76); This family consists mainly of baculovirus proteins. Family members include ...
 1-82 3.11e-21

Orf76 (Ac76); This family consists mainly of baculovirus proteins. Family members include Autographa californica multiple nucleopolyhedrovirus (AcMNPV), protein AC76. Ac76 has been shown to be involved in intranuclear microvesicle formation. Functional studies suggest that ac76 is essential for both BV (budded virus) and ODV (occlusion-derived virus) development but is not required for viral DNA synthesis.


Pssm-ID: 114536  Cd Length: 83  Bit Score: 79.26  E-value: 3.11e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9630017     1 MHLYLLLGALAVFSLVYDKKENG---IVFYFLILVLVFVLISPAFIskNTESAANDLPSHKAKSVRKKLEIEQALDAILN 77
Cdd:pfam05814  1 MLIYFLFIALIVLAFIFDKNEGSselILTLLVLFVLFFCLLNVYYI--NTESTPADLYTEKAKKIKKKQDLEDAFDAILN 78


                 ....*
gi 9630017    78 KNTSS 82
Cdd:pfam05814 79 KNNSS 83
 
Name Accession Description Interval E-value
Ac76 pfam05814
Orf76 (Ac76); This family consists mainly of baculovirus proteins. Family members include ...
 1-82 3.11e-21

Orf76 (Ac76); This family consists mainly of baculovirus proteins. Family members include Autographa californica multiple nucleopolyhedrovirus (AcMNPV), protein AC76. Ac76 has been shown to be involved in intranuclear microvesicle formation. Functional studies suggest that ac76 is essential for both BV (budded virus) and ODV (occlusion-derived virus) development but is not required for viral DNA synthesis.


Pssm-ID: 114536  Cd Length: 83  Bit Score: 79.26  E-value: 3.11e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9630017     1 MHLYLLLGALAVFSLVYDKKENG---IVFYFLILVLVFVLISPAFIskNTESAANDLPSHKAKSVRKKLEIEQALDAILN 77
Cdd:pfam05814  1 MLIYFLFIALIVLAFIFDKNEGSselILTLLVLFVLFFCLLNVYYI--NTESTPADLYTEKAKKIKKKQDLEDAFDAILN 78


                 ....*
gi 9630017    78 KNTSS 82
Cdd:pfam05814 79 KNNSS 83
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH