|
Name |
Accession |
Description |
Interval |
E-value |
| PLN02381 |
PLN02381 |
valyl-tRNA synthetase |
10-172 |
2.04e-79 |
|
valyl-tRNA synthetase
Pssm-ID: 215214 [Multi-domain] Cd Length: 1066 Bit Score: 255.98 E-value: 2.04e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 10 TVYAWWQYQFCDVFIEAIKPYFSADTQR----RIHAQDALWVCLETGLRLLHPFMPYITEELWQRLPSSQDSERKASIMI 85
Cdd:PLN02381 805 TVYSWWQYQFCDVFIEAIKPYFAGDNPEfaseRAAAQDTLWICLDTGLRLLHPFMPFVTEELWQRLPQPKDHTRKDSIMI 884
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 86 CDYPSSIEMWTNEKVETEMDMVLATVKTLRALRaAESLKRQRNEKFHAFALSGNALTLGIVKPHELEIRTLANLSSFEVM 165
Cdd:PLN02381 885 SEYPSAVEAWTNEKVEYEMDLVLSTVKCLRSLR-AEVLEKQKNERLPAFALCRNQEIAAIIKSHQLEILTLANLSSLKVL 963
|
....*..
gi 15223442 166 LRGEDKA 172
Cdd:PLN02381 964 LSENDAP 970
|
|
| ValS |
COG0525 |
Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Valyl-tRNA synthetase ... |
18-184 |
2.24e-34 |
|
Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Valyl-tRNA synthetase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 440291 [Multi-domain] Cd Length: 877 Bit Score: 128.63 E-value: 2.24e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 18 QFCDVFIEAIKP-YFSADTQRRIHAQDALWVCLETGLRLLHPFMPYITEELWQRLPSSQDSErkaSIMICDYPSSIEMWT 96
Cdd:COG0525 642 EFCDWYLELAKPrLYGGDEAAKRETRATLVYVLEQILRLLHPFMPFITEEIWQKLPPRKEGE---SIMLAPWPEADEELI 718
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 97 NEKVETEMDMVLATVKTLRALRAAESLKrqRNEKFHAFALSGNALTLGIVKPHELEIRTLANLSSFEVMLRGEDK---AF 173
Cdd:COG0525 719 DEEAEAEFEWLKEVISAIRNIRAEMNIP--PSKKLPLLLKGADEADRARLEENAAYIKRLARLEEITILVDEKPEgaaSA 796
|
170
....*....|.
gi 15223442 174 VVcwEEIEIWI 184
Cdd:COG0525 797 VV--GGAEVFL 805
|
|
| Anticodon_Ia_Val |
cd07962 |
Anticodon-binding domain of valyl tRNA synthetases; This domain is found in valyl tRNA ... |
10-71 |
6.50e-25 |
|
Anticodon-binding domain of valyl tRNA synthetases; This domain is found in valyl tRNA synthetases (ValRS), which belong to the class Ia aminoacyl tRNA synthetases. It lies C-terminal to the catalytic core domain, and recognizes and specifically binds to the tRNA anticodon. ValRS catalyzes the transfer of valine to the 3'-end of its tRNA.
Pssm-ID: 153416 [Multi-domain] Cd Length: 135 Bit Score: 94.16 E-value: 6.50e-25
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15223442 10 TVYAWWQYQFCDVFIEAIKP-YFSADTQRRIHAQDALWVCLETGLRLLHPFMPYITEELWQRL 71
Cdd:cd07962 73 ALYEFFWNDFCDWYLELVKPrLYGEDEEEKKAARATLYYVLETILRLLHPFMPFITEELWQRL 135
|
|
| valS |
TIGR00422 |
valyl-tRNA synthetase; The valyl-tRNA synthetase (ValS) is a class I amino acyl-tRNA ligase ... |
11-164 |
1.01e-24 |
|
valyl-tRNA synthetase; The valyl-tRNA synthetase (ValS) is a class I amino acyl-tRNA ligase and is particularly closely related to the isoleucyl tRNA synthetase. [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 273070 [Multi-domain] Cd Length: 861 Bit Score: 100.90 E-value: 1.01e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 11 VYAWWQYQFCDVFIEAIKPYF-SADTQRRIHAQDALWVCLETGLRLLHPFMPYITEELWQRLPssqdsERKASIMICDYP 89
Cdd:TIGR00422 637 LYEFIWNDFCDWYIELVKYRLyNGNEAEKKAARDTLYYVLDKALRLLHPFMPFITEEIWQHFK-----EGADSIMLQSYP 711
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15223442 90 SSIEMWTNEKVETEMDMVLATVKTLRALRAAESLKRQRNEKfhaFALSG-NALTLGIVKPHELEIRTLANLSSFEV 164
Cdd:TIGR00422 712 VVDAEFVDEEAEKAFELLKEIIVSIRNLKAESNIPPNAPLK---VLLIYtEAETAERLKLNAVDIKGAINFSEVEV 784
|
|
| Anticodon_1 |
pfam08264 |
Anticodon-binding domain of tRNA ligase; This domain is found mainly hydrophobic tRNA ... |
11-125 |
1.43e-23 |
|
Anticodon-binding domain of tRNA ligase; This domain is found mainly hydrophobic tRNA synthetases. The domain binds to the anticodon of the tRNA ligase.
Pssm-ID: 400523 [Multi-domain] Cd Length: 141 Bit Score: 90.93 E-value: 1.43e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 11 VYAWWQYQFCDVFIEAIKPYFSADTqRRIHAQDALWVCLETGLRLLHPFMPYITEELWQRLpssqdserkaSIMICDYPS 90
Cdd:pfam08264 31 LYEFFWNDLSDWYLELIKDRLYGEE-PDSRAQTTLYEVLETLLRLLAPFMPFITEELWQKE----------SIHLAPWPE 99
|
90 100 110
....*....|....*....|....*....|....*
gi 15223442 91 SIEMWTNEKvETEMDMVLATVKTLRALRAAESLKR 125
Cdd:pfam08264 100 DAELEEAEL-EEAFELRQEIVQAIRKLRSELKIKK 133
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN02381 |
PLN02381 |
valyl-tRNA synthetase |
10-172 |
2.04e-79 |
|
valyl-tRNA synthetase
Pssm-ID: 215214 [Multi-domain] Cd Length: 1066 Bit Score: 255.98 E-value: 2.04e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 10 TVYAWWQYQFCDVFIEAIKPYFSADTQR----RIHAQDALWVCLETGLRLLHPFMPYITEELWQRLPSSQDSERKASIMI 85
Cdd:PLN02381 805 TVYSWWQYQFCDVFIEAIKPYFAGDNPEfaseRAAAQDTLWICLDTGLRLLHPFMPFVTEELWQRLPQPKDHTRKDSIMI 884
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 86 CDYPSSIEMWTNEKVETEMDMVLATVKTLRALRaAESLKRQRNEKFHAFALSGNALTLGIVKPHELEIRTLANLSSFEVM 165
Cdd:PLN02381 885 SEYPSAVEAWTNEKVEYEMDLVLSTVKCLRSLR-AEVLEKQKNERLPAFALCRNQEIAAIIKSHQLEILTLANLSSLKVL 963
|
....*..
gi 15223442 166 LRGEDKA 172
Cdd:PLN02381 964 LSENDAP 970
|
|
| PTZ00419 |
PTZ00419 |
valyl-tRNA synthetase-like protein; Provisional |
11-176 |
1.15e-47 |
|
valyl-tRNA synthetase-like protein; Provisional
Pssm-ID: 240411 [Multi-domain] Cd Length: 995 Bit Score: 166.72 E-value: 1.15e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 11 VYAWWQYQFCDVFIEAIKPYFS--ADTQRRIHAQDALWVCLETGLRLLHPFMPYITEELWQRLPssQDSERKASIMICDY 88
Cdd:PTZ00419 741 TYNFWLYELCDVYLELIKPRLSkqSDGERKQHAQDVLHTVLDIGLRLLHPMMPFITEELYQRLP--NYLRKSESISIAKY 818
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 89 PSSIEMWTNEKVETEMDMVLATVKTLRALRAAESLKrqRNEKFHAFALSGNALTLGIVKPHELEIRTLANLSSFEVMLRG 168
Cdd:PTZ00419 819 PQPNPGWNNEALDEEMKIIMSIVKSIRSLIATLGIP--NKTKPDCYVTAKDAELIELIESAENLISTLAKIGSVSVIPPI 896
|
....*...
gi 15223442 169 EDKAFVVC 176
Cdd:PTZ00419 897 EEEAEVPK 904
|
|
| ValS |
COG0525 |
Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Valyl-tRNA synthetase ... |
18-184 |
2.24e-34 |
|
Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Valyl-tRNA synthetase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 440291 [Multi-domain] Cd Length: 877 Bit Score: 128.63 E-value: 2.24e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 18 QFCDVFIEAIKP-YFSADTQRRIHAQDALWVCLETGLRLLHPFMPYITEELWQRLPSSQDSErkaSIMICDYPSSIEMWT 96
Cdd:COG0525 642 EFCDWYLELAKPrLYGGDEAAKRETRATLVYVLEQILRLLHPFMPFITEEIWQKLPPRKEGE---SIMLAPWPEADEELI 718
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 97 NEKVETEMDMVLATVKTLRALRAAESLKrqRNEKFHAFALSGNALTLGIVKPHELEIRTLANLSSFEVMLRGEDK---AF 173
Cdd:COG0525 719 DEEAEAEFEWLKEVISAIRNIRAEMNIP--PSKKLPLLLKGADEADRARLEENAAYIKRLARLEEITILVDEKPEgaaSA 796
|
170
....*....|.
gi 15223442 174 VVcwEEIEIWI 184
Cdd:COG0525 797 VV--GGAEVFL 805
|
|
| valS |
PRK05729 |
valyl-tRNA synthetase; Reviewed |
18-171 |
1.76e-29 |
|
valyl-tRNA synthetase; Reviewed
Pssm-ID: 235582 [Multi-domain] Cd Length: 874 Bit Score: 114.43 E-value: 1.76e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 18 QFCDVFIEAIKPYFSADTQRRihAQDALWVCLETGLRLLHPFMPYITEELWQRLPssqDSERKASIMICDYPSSIEMWtN 97
Cdd:PRK05729 640 EFCDWYLELAKPVLQEAAKRA--TRATLAYVLEQILRLLHPFMPFITEELWQKLA---PLGIEESIMLAPWPEADEAI-D 713
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15223442 98 EKVETEMDMVLATVKTLRALRAAESLKRQRNEKfhAFALSGNALTLGIVKPHELEIRTLANLSSFEVMLRGEDK 171
Cdd:PRK05729 714 EAAEAEFEWLKELITAIRNIRAEMNIPPSKKLP--LLLKGADAEDRARLEANEAYIKRLARLESLEILADDEEA 785
|
|
| Anticodon_Ia_Val |
cd07962 |
Anticodon-binding domain of valyl tRNA synthetases; This domain is found in valyl tRNA ... |
10-71 |
6.50e-25 |
|
Anticodon-binding domain of valyl tRNA synthetases; This domain is found in valyl tRNA synthetases (ValRS), which belong to the class Ia aminoacyl tRNA synthetases. It lies C-terminal to the catalytic core domain, and recognizes and specifically binds to the tRNA anticodon. ValRS catalyzes the transfer of valine to the 3'-end of its tRNA.
Pssm-ID: 153416 [Multi-domain] Cd Length: 135 Bit Score: 94.16 E-value: 6.50e-25
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15223442 10 TVYAWWQYQFCDVFIEAIKP-YFSADTQRRIHAQDALWVCLETGLRLLHPFMPYITEELWQRL 71
Cdd:cd07962 73 ALYEFFWNDFCDWYLELVKPrLYGEDEEEKKAARATLYYVLETILRLLHPFMPFITEELWQRL 135
|
|
| valS |
TIGR00422 |
valyl-tRNA synthetase; The valyl-tRNA synthetase (ValS) is a class I amino acyl-tRNA ligase ... |
11-164 |
1.01e-24 |
|
valyl-tRNA synthetase; The valyl-tRNA synthetase (ValS) is a class I amino acyl-tRNA ligase and is particularly closely related to the isoleucyl tRNA synthetase. [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 273070 [Multi-domain] Cd Length: 861 Bit Score: 100.90 E-value: 1.01e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 11 VYAWWQYQFCDVFIEAIKPYF-SADTQRRIHAQDALWVCLETGLRLLHPFMPYITEELWQRLPssqdsERKASIMICDYP 89
Cdd:TIGR00422 637 LYEFIWNDFCDWYIELVKYRLyNGNEAEKKAARDTLYYVLDKALRLLHPFMPFITEEIWQHFK-----EGADSIMLQSYP 711
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15223442 90 SSIEMWTNEKVETEMDMVLATVKTLRALRAAESLKRQRNEKfhaFALSG-NALTLGIVKPHELEIRTLANLSSFEV 164
Cdd:TIGR00422 712 VVDAEFVDEEAEKAFELLKEIIVSIRNLKAESNIPPNAPLK---VLLIYtEAETAERLKLNAVDIKGAINFSEVEV 784
|
|
| Anticodon_1 |
pfam08264 |
Anticodon-binding domain of tRNA ligase; This domain is found mainly hydrophobic tRNA ... |
11-125 |
1.43e-23 |
|
Anticodon-binding domain of tRNA ligase; This domain is found mainly hydrophobic tRNA synthetases. The domain binds to the anticodon of the tRNA ligase.
Pssm-ID: 400523 [Multi-domain] Cd Length: 141 Bit Score: 90.93 E-value: 1.43e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 11 VYAWWQYQFCDVFIEAIKPYFSADTqRRIHAQDALWVCLETGLRLLHPFMPYITEELWQRLpssqdserkaSIMICDYPS 90
Cdd:pfam08264 31 LYEFFWNDLSDWYLELIKDRLYGEE-PDSRAQTTLYEVLETLLRLLAPFMPFITEELWQKE----------SIHLAPWPE 99
|
90 100 110
....*....|....*....|....*....|....*
gi 15223442 91 SIEMWTNEKvETEMDMVLATVKTLRALRAAESLKR 125
Cdd:pfam08264 100 DAELEEAEL-EEAFELRQEIVQAIRKLRSELKIKK 133
|
|
| valS |
PRK14900 |
valyl-tRNA synthetase; Provisional |
10-174 |
3.10e-23 |
|
valyl-tRNA synthetase; Provisional
Pssm-ID: 237855 [Multi-domain] Cd Length: 1052 Bit Score: 96.60 E-value: 3.10e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 10 TVYAWWQYQFCDVFIEAIK-PYFSADTQRRIHAQDALWVCLETGLRLLHPFMPYITEELWQRLPSSQDSERKA-SIMICD 87
Cdd:PRK14900 651 AVYAFVWHELCDWYIELAKeALASEDPEARRSVQAVLVHCLQTSYRLLHPFMPFITEELWHVLRAQVGASAWAdSVLAAE 730
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 88 YPSSIEMwtNEKVETEMDMVLATVKTLRALRAAESL--KRQRNEKFHAFALSGNALTLGIVKPHEL-EIRTLANLSSFEV 164
Cdd:PRK14900 731 YPRKGEA--DEAAEAAFRPVLGIIDAVRNIRGEMGIpwKVKLGAQAPVEIAVADPALRDLLQAGELaRVHRVAGVEGSRL 808
|
170
....*....|....*.
gi 15223442 165 ML------RGEDKAFV 174
Cdd:PRK14900 809 VVaaatapAPQSAVGV 824
|
|
| IleS |
COG0060 |
Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Isoleucyl-tRNA ... |
33-184 |
9.55e-20 |
|
Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Isoleucyl-tRNA synthetase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 439830 [Multi-domain] Cd Length: 931 Bit Score: 86.29 E-value: 9.55e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 33 ADTQRRIHAQDALWVCLETGLRLLHPFMPYITEELWQRLPssqdSERKASIMICDYPSSIEMWTNEKVETEMDMVLATV- 111
Cdd:COG0060 741 ADSLDRRAAQTTLYEVLETLVRLLAPILPFTAEEIWQNLP----GEAEESVHLADWPEVDEELIDEELEAKWDLVREVRs 816
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 112 ---KTLRALRAAE----SLKRqrnekfhAFALSGNALTLGIVKPHELEIRTLANLSSFEVM----LRGEDKAFVVCWEEI 180
Cdd:COG0060 817 avlKALEAARKEKlirqPLEA-------AVVLYADEELAAALESLGDLLAEELNVSEVELVddaeDLGKDALKALDVEGI 889
|
....
gi 15223442 181 EIWI 184
Cdd:COG0060 890 SVTV 893
|
|
| valS |
PRK13208 |
valyl-tRNA synthetase; Reviewed |
15-122 |
6.11e-13 |
|
valyl-tRNA synthetase; Reviewed
Pssm-ID: 237306 [Multi-domain] Cd Length: 800 Bit Score: 66.37 E-value: 6.11e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 15 WQYqFCDVFIEAIKP--YFSADTQRRIHAQDALWVCLETGLRLLHPFMPYITEELWQRLPSSqdserkaSIMICDYPSSI 92
Cdd:PRK13208 647 WHV-FCDDYLELVKSraYGEDEEEEQKSARYTLYTVLDTLLRLLAPFLPFITEEVWSWLYGG-------SVHRASWPEPD 718
|
90 100 110
....*....|....*....|....*....|
gi 15223442 93 EMWTNEKVETEMDMVlatVKTLRALRAAES 122
Cdd:PRK13208 719 EELIDEEDEELGELA---KEILSAVRKYKS 745
|
|
| PLN02943 |
PLN02943 |
aminoacyl-tRNA ligase |
11-164 |
1.94e-12 |
|
aminoacyl-tRNA ligase
Pssm-ID: 215509 [Multi-domain] Cd Length: 958 Bit Score: 65.35 E-value: 1.94e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 11 VYAWWQYQFCDVFIEAIKP--YFSADTQRRIHAQDALWVCLETGLRLLHPFMPYITEELWQRLPssqdsERKASIMICDY 88
Cdd:PLN02943 707 IYDFFWSDFADWYIEASKTrlYHSGDNSALSRAQAVLLYVFENILKLLHPFMPFVTEELWQALP-----YRKEALIVSPW 781
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15223442 89 PSSiEMWTNEKVETEMDMVLATVKTLRALRAAESLKRQRneKFHAFALSGNALTLGIVKPHELeirtLANLSSFEV 164
Cdd:PLN02943 782 PQT-SLPKDLKSIKRFENLQSLTRAIRNARAEYSVEPAK--RISASIVASAEVIEYISKEKEV----LALLSRLDL 850
|
|
| Anticodon_Ia_Ile_ABEc |
cd07961 |
Anticodon-binding domain of archaeal, bacterial, and eukaryotic cytoplasmic isoleucyl tRNA ... |
32-111 |
3.46e-10 |
|
Anticodon-binding domain of archaeal, bacterial, and eukaryotic cytoplasmic isoleucyl tRNA synthetases; This domain is found in isoleucyl tRNA synthetases (IleRS), which belong to the class Ia aminoacyl tRNA synthetases. It lies C-terminal to the catalytic core domain, and recognizes and specifically binds to the tRNA anticodon. This family includes bacterial, archaeal, and eukaryotic cytoplasmic members. IleRS catalyzes the transfer of isoleucine to the 3'-end of its tRNA.
Pssm-ID: 153415 [Multi-domain] Cd Length: 183 Bit Score: 56.79 E-value: 3.46e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 32 SADTQRRIHAQDALWVCLETGLRLLHPFMPYITEELWQRL--PSSQDSErkaSIMICDYPSSIEMWTNEKVETEMDMVLA 109
Cdd:cd07961 101 EEGDDDKLAAYATLYEVLLTLSRLMAPFTPFITEEIYQNLrrELGDAPE---SVHLLDWPEVDESLIDEELEEAMELVRE 177
|
..
gi 15223442 110 TV 111
Cdd:cd07961 178 IV 179
|
|
| Anticodon_Ia_Ile_BEm |
cd07960 |
Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases; ... |
17-109 |
2.74e-08 |
|
Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases; This domain is found in isoleucyl tRNA synthetases (IleRS), which belong to the class Ia aminoacyl tRNA synthetases. It lies C-terminal to the catalytic core domain, and recognizes and specifically binds to the tRNA anticodon. This family includes bacterial and eukaryotic mitochondrial members. IleRS catalyzes the transfer of isoleucine to the 3'-end of its tRNA.
Pssm-ID: 153414 [Multi-domain] Cd Length: 180 Bit Score: 51.37 E-value: 2.74e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 17 YQFCDVFIEAIkpYF----------SADTQRRIHAQDALWVCLETGLRLLHPFMPYITEELWQRLPSSQDSErkaSIMIC 86
Cdd:cd07960 77 NNFCTVDLSAF--YLdiikdrlycdAKDSLERRSAQTVLYHILDALLKLLAPILPFTAEEVWEHLPGEKKEE---SVFLE 151
|
90 100
....*....|....*....|...
gi 15223442 87 DYPSSIEMWTNEKVETEMDMVLA 109
Cdd:cd07960 152 DWPELPEEWKDEELEEKWEKLLA 174
|
|
| leuS |
PRK12300 |
leucyl-tRNA synthetase; Reviewed |
42-115 |
1.91e-06 |
|
leucyl-tRNA synthetase; Reviewed
Pssm-ID: 237049 [Multi-domain] Cd Length: 897 Bit Score: 47.56 E-value: 1.91e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15223442 42 QDALWVCLETGLRLLHPFMPYITEELWQRLpssqdsERKASIMICDYPSSIEMWTNEKVETEMDMVLATVKTLR 115
Cdd:PRK12300 701 NKVLREVLEIWIRLLAPFTPHLAEELWHKL------GGEGFVSLEKWPEPDESKIDEEAELAEEYVKRLIEDIR 768
|
|
| PLN02882 |
PLN02882 |
aminoacyl-tRNA ligase |
41-118 |
1.96e-05 |
|
aminoacyl-tRNA ligase
Pssm-ID: 215477 [Multi-domain] Cd Length: 1159 Bit Score: 44.72 E-value: 1.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15223442 41 AQDALWVCLETGLRLLHPFMPYITEELWQ--RLPSSQDSErkaSIMICDYPSSIEMWTNEKVETEMDMVLATVKTLRALR 118
Cdd:PLN02882 769 ALSTLYNVLLTSCKVMAPFTPFFTEVLYQnlRKVLPGSEE---SIHYCSFPQVDEGELDERIEQSVSRMQTVIELARNIR 845
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| Anticodon_Ia_Leu_BEm |
cd07958 |
Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases; ... |
49-71 |
2.63e-05 |
|
Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases; This domain is found in leucyl tRNA synthetases (LeuRS), which belong to the class Ia aminoacyl tRNA synthetases. It lies C-terminal to the catalytic core domain. In contrast to other class Ia enzymes, the anticodon is not used as an identity element in LeuRS (with exceptions such as Saccharomyces cerevisiae and some other eukaryotes). No anticodon-binding site can be defined for this family, which includes bacterial and eukaryotic mitochondrial members, as well as LeuRS from the archaeal Halobacteria. LeuRS catalyzes the transfer of leucine to the 3'-end of its tRNA.
Pssm-ID: 153412 [Multi-domain] Cd Length: 117 Bit Score: 41.82 E-value: 2.63e-05
10 20
....*....|....*....|...
gi 15223442 49 LETGLRLLHPFMPYITEELWQRL 71
Cdd:cd07958 95 LETLVLLLAPFAPHIAEELWEEL 117
|
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| Anticodon_Ia_Leu_AEc |
cd07959 |
Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases; This ... |
43-71 |
5.98e-03 |
|
Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases; This domain is found in leucyl tRNA synthetases (LeuRS), which belong to the class Ia aminoacyl tRNA synthetases. It lies C-terminal to the catalytic core domain. In contrast to other class Ia enzymes, the anticodon is not used as an identity element in LeuRS (with exceptions such as Saccharomyces cerevisiae and some other eukaryotes). No anticodon-binding site can be defined for this family, which includes archaeal and eukaryotic cytoplasmic members. LeuRS catalyzes the transfer of leucine to the 3'-end of its tRNA.
Pssm-ID: 153413 [Multi-domain] Cd Length: 117 Bit Score: 35.26 E-value: 5.98e-03
10 20
....*....|....*....|....*....
gi 15223442 43 DALWVCLETGLRLLHPFMPYITEELWQRL 71
Cdd:cd07959 89 DLLRRFIEVWTRLLAPFAPHLAEEIWHEL 117
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