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Conserved domains on  [gi|30685162|ref|NP_188532|]
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Leucine-rich repeat (LRR) family protein [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN00113 super family cl33413
leucine-rich repeat receptor-like protein kinase; Provisional
 84-349 4.02e-32

leucine-rich repeat receptor-like protein kinase; Provisional


The actual alignment was detected with superfamily member PLN00113:

Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 134.98  E-value: 4.02e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162   84 KAFYSDPFNTAANW-VGPDVCSYKGVFCApalddpSVLVVAGIDLNHADIAGYLPPELGLLTDVALFHVNSNRFCGVIPK 162
Cdd:PLN00113  38 KSSINDPLKYLSNWnSSADVCLWQGITCN------NSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPD 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  163 SLSKL--TLMYeFDVSNNRFVGPFPTVALswPSLKFLDIRYNDFEGKLPPEI-FDKDLDAIFLNNNRFESTIPETIGKST 239
Cdd:PLN00113 112 DIFTTssSLRY-LNLSNNNFTGSIPRGSI--PNLETLDLSNNMLSGEIPNDIgSFSSLKVLDLGGNVLVGKIPNSLTNLT 188

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  240 A-SVVTFAHNKFSGCIPKTIGQMKNLNEIVFIGNNLSGCLPNEIGSLNNVTVFDASSNGFVGSLPSTLSGLANVEQMDFS 318
Cdd:PLN00113 189 SlEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLY 268

                        250       260       270
                 ....*....|....*....|....*....|.
gi 30685162  319 YNKFTGFVTDNICKLPKLSNFTFSYNFFNGE 349
Cdd:PLN00113 269 QNKLSGPIPPSIFSLQKLISLDLSDNSLSGE 299
PspC_subgroup_2 super family cl41463
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
 420-621 1.12e-12

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


The actual alignment was detected with superfamily member NF033839:

Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 71.72  E-value: 1.12e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  420 PKKEINPPNLEEPSKPKPEESPKPQQPSPKPETPSHEPS-NPKEPKPESPKQESPKTEQPKPKPESPKQESPKQEAPKPE 498
Cdd:NF033839 295 PKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKpQPEKPKPEVKPQLETPKPEVKPQPEKPKPEVKPQPEKPKP 374

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  499 QPKPKPESPKQESSKQEPPKPEESPKPEPPKPEESPkpqpPKQETPKPEESPKPQPPKQETPKPEESPKPQP-PKQETPK 577
Cdd:NF033839 375 EVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEVK----PQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVkPQPEKPK 450

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 30685162  578 PEESPKPQPPKQEQPPKTEAPKMG-SPPLESPVPNDPYDASPIKK 621
Cdd:NF033839 451 PEVKPQPETPKPEVKPQPEKPKPEvKPQPEKPKPDNSKPQADDKK 495
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 84-349 4.02e-32

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 134.98  E-value: 4.02e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162   84 KAFYSDPFNTAANW-VGPDVCSYKGVFCApalddpSVLVVAGIDLNHADIAGYLPPELGLLTDVALFHVNSNRFCGVIPK 162
Cdd:PLN00113  38 KSSINDPLKYLSNWnSSADVCLWQGITCN------NSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPD 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  163 SLSKL--TLMYeFDVSNNRFVGPFPTVALswPSLKFLDIRYNDFEGKLPPEI-FDKDLDAIFLNNNRFESTIPETIGKST 239
Cdd:PLN00113 112 DIFTTssSLRY-LNLSNNNFTGSIPRGSI--PNLETLDLSNNMLSGEIPNDIgSFSSLKVLDLGGNVLVGKIPNSLTNLT 188

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  240 A-SVVTFAHNKFSGCIPKTIGQMKNLNEIVFIGNNLSGCLPNEIGSLNNVTVFDASSNGFVGSLPSTLSGLANVEQMDFS 318
Cdd:PLN00113 189 SlEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLY 268

                        250       260       270
                 ....*....|....*....|....*....|.
gi 30685162  319 YNKFTGFVTDNICKLPKLSNFTFSYNFFNGE 349
Cdd:PLN00113 269 QNKLSGPIPPSIFSLQKLISLDLSDNSLSGE 299
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
50-344 1.67e-21

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 98.47  E-value: 1.67e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  50 NGDLPDDIEYEVDLDLKFANNRLKRAYIALQAWKKAFYSDPFNTAANWVGPDVCSYKGVFCAPALDDPSVLVVAGIDLNH 129
Cdd:COG4886   2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLL 81

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162 130 ADIAGYLPPELGLLTDVALFHVNSNrfcgvipKSLSKLTLMYEFDVSNNRfVGPFPTVALSWPSLKFLDIRYNDFEgKLP 209
Cdd:COG4886  82 LSLLLLGLTDLGDLTNLTELDLSGN-------EELSNLTNLESLDLSGNQ-LTDLPEELANLTNLKELDLSNNQLT-DLP 152

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162 210 PEIFD-KDLDAIFLNNNRFEStIPETIGKSTA-SVVTFAHNKFSGcIPKTIGQMKNLNEIVFIGNNLSGcLPNEIGSLNN 287
Cdd:COG4886 153 EPLGNlTNLKSLDLSNNQLTD-LPEELGNLTNlKELDLSNNQITD-LPEPLGNLTNLEELDLSGNQLTD-LPEPLANLTN 229

                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 30685162 288 VTVFDASSNGFVgSLPStLSGLANVEQMDFSYNKFTGFvtDNICKLPKLSNFTFSYN 344
Cdd:COG4886 230 LETLDLSNNQLT-DLPE-LGNLTNLEELDLSNNQLTDL--PPLANLTNLKTLDLSNN 282
PspC_subgroup_2 NF033839
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
 420-621 1.12e-12

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 71.72  E-value: 1.12e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  420 PKKEINPPNLEEPSKPKPEESPKPQQPSPKPETPSHEPS-NPKEPKPESPKQESPKTEQPKPKPESPKQESPKQEAPKPE 498
Cdd:NF033839 295 PKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKpQPEKPKPEVKPQLETPKPEVKPQPEKPKPEVKPQPEKPKP 374

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  499 QPKPKPESPKQESSKQEPPKPEESPKPEPPKPEESPkpqpPKQETPKPEESPKPQPPKQETPKPEESPKPQP-PKQETPK 577
Cdd:NF033839 375 EVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEVK----PQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVkPQPEKPK 450

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 30685162  578 PEESPKPQPPKQEQPPKTEAPKMG-SPPLESPVPNDPYDASPIKK 621
Cdd:NF033839 451 PEVKPQPETPKPEVKPQPEKPKPEvKPQPEKPKPDNSKPQADDKK 495
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 420-636 3.66e-06

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 50.84  E-value: 3.66e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  420 PKKEINPPNLEEPSKPKPEESPKPQQPSPKPETP--SHEPSNPKEPK-PESPKQESPKTEQPKP-KPESPKqeSPKQEAP 495
Cdd:PTZ00449 582 PKDPKHPKDPEEPKKPKRPRSAQRPTRPKSPKLPelLDIPKSPKRPEsPKSPKRPPPPQRPSSPeRPEGPK--IIKSPKP 659

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  496 KPEQPKPKPESPKQ----ESSKQEPPKPEESPKPEPPKPEESPKPQPPKQETPKPEESPKPQPPKQ--------ETPKPE 563
Cdd:PTZ00449 660 PKSPKPPFDPKFKEkfydDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKLprdeefpfEPIGDP 739

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  564 ESPKPQPPKQETPKPEESPKPQPPKQEQPPK---------------TEAP-----KMGSPPLESPVPNDPYDASPIKKRR 623
Cdd:PTZ00449 740 DAEQPDDIEFFTPPEEERTFFHETPADTPLPdilaeefkeedihaeTGEPdeamkRPDSPSEHEDKPPGDHPSLPKKRHR 819

                        250
                 ....*....|...
gi 30685162  624 PQPPSPSTEETKT 636
Cdd:PTZ00449 820 LDGLALSTTDLES 832
PspC_subgroup_2 NF033839
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
 457-629 2.47e-05

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 48.23  E-value: 2.47e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  457 PSNPKEPKPESPKQESPKTEQPKPKPESPKQESPKQEAPkpeqpkpkpespkqesskqeppkpeespkpeppkpeespkp 536
Cdd:NF033839 284 PKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVK----------------------------------------- 322

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  537 qpPKQETPKPEESPKPQ------PPKQETPKPEESPKPQPPKQ------ETPKPEESPKPQPPKQEQPPKTEAPKMG-SP 603
Cdd:NF033839 323 --PQLEKPKPEVKPQPEkpkpevKPQLETPKPEVKPQPEKPKPevkpqpEKPKPEVKPQPETPKPEVKPQPEKPKPEvKP 400

                        170       180
                 ....*....|....*....|....*....
gi 30685162  604 PLESPVPN---DPYDASPIKKRRPQPPSP 629
Cdd:NF033839 401 QPEKPKPEvkpQPEKPKPEVKPQPEKPKP 429
PspC_subgroup_2 NF033839
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
 539-632 3.64e-05

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 47.46  E-value: 3.64e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  539 PKQETPKPEESPKPQPPKQ------ETPKPE-----ESPKPQP-PKQETPKPEESPKPQPPKQEQPPKTEAPKMG-SPPL 605
Cdd:NF033839 290 KKPSAPKPGMQPSPQPEKKevkpepETPKPEvkpqlEKPKPEVkPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEvKPQP 369

                         90       100
                 ....*....|....*....|....*...
gi 30685162  606 ESPVPN-DPYDASPIKKRRPQPPSPSTE 632
Cdd:NF033839 370 EKPKPEvKPQPETPKPEVKPQPEKPKPE 397
PspC_subgroup_2 NF033839
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
 431-632 2.48e-04

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 44.76  E-value: 2.48e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  431 EPSKPKPEESPKPQQPSPKPET-PSHEPSNPKEPKPE-SPKQESPK----TEQPKPKPESPKQESPKQEAPKPEQPKPKP 504
Cdd:NF033839 158 KPETPQPENPEHQKPTTPAPDTkPSPQPEGKKPSVPDiNQEKEKAKlavaTYMSKILDDIQKHHLQKEKHRQIVALIKEL 237

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  505 ESPKQES-------SKQEPPKPEESPKPEPPKPEESPKPQPPKQETPKPEESPKPqppkqETPKPEESPKPQPPKQ---- 573
Cdd:NF033839 238 DELKKQAlseidnvNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKP-----SAPKPGMQPSPQPEKKevkp 312

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 30685162  574 --ETPKPEESPKPQPPKQEQPPKTEAPKMGSPP-LESPVPN-DPYDASPIKKRRPQPPSPSTE 632
Cdd:NF033839 313 epETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPqLETPKPEvKPQPEKPKPEVKPQPEKPKPE 375
ftsN TIGR02223
cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a ...
 420-580 4.92e-03

cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a number of Proteobacteria. The N-terminal 30 residue region tends to by Lys/Arg-rich, and is followed by a membrane-spanning region. This is followed by an acidic low-complexity region of variable length and a well-conserved C-terminal domain of two tandem regions matched by pfam05036 (Sporulation related repeat), found in several cell division and sporulation proteins. The role of FtsN as a suppressor for other cell division mutations is poorly understood; it may involve cell wall hydrolysis. [Cellular processes, Cell division]


Pssm-ID: 274041 [Multi-domain]  Cd Length: 298  Bit Score: 40.06  E-value: 4.92e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162   420 PKKEINPPNLEEPSKPKPEESPKPQQPSPKPETPSHEPSNPKEPKP-ESPKQESPKTEQPKPKPESPKQESPKQEAPKPE 498
Cdd:TIGR02223  62 PKNQTENGETAADLPPKPEERWSYIEELEAREVLINDPEEPSNGGGvEESAQLTAEQRQLLEQMQADMRAAEKVLATAPS 141

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162   499 QPKPKPESPKQESSKQEPPKpeespkpeppkpeespkpQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKP 578
Cdd:TIGR02223 142 EQTVAVEARKQTAEKKPQKA------------------RTAEAQKTPVETEKIASKVKEAKQKQKALPKQTAETQSNSKP 203


                  ..
gi 30685162   579 EE 580
Cdd:TIGR02223 204 IE 205
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 84-349 4.02e-32

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 134.98  E-value: 4.02e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162   84 KAFYSDPFNTAANW-VGPDVCSYKGVFCApalddpSVLVVAGIDLNHADIAGYLPPELGLLTDVALFHVNSNRFCGVIPK 162
Cdd:PLN00113  38 KSSINDPLKYLSNWnSSADVCLWQGITCN------NSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPD 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  163 SLSKL--TLMYeFDVSNNRFVGPFPTVALswPSLKFLDIRYNDFEGKLPPEI-FDKDLDAIFLNNNRFESTIPETIGKST 239
Cdd:PLN00113 112 DIFTTssSLRY-LNLSNNNFTGSIPRGSI--PNLETLDLSNNMLSGEIPNDIgSFSSLKVLDLGGNVLVGKIPNSLTNLT 188

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  240 A-SVVTFAHNKFSGCIPKTIGQMKNLNEIVFIGNNLSGCLPNEIGSLNNVTVFDASSNGFVGSLPSTLSGLANVEQMDFS 318
Cdd:PLN00113 189 SlEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLY 268

                        250       260       270
                 ....*....|....*....|....*....|.
gi 30685162  319 YNKFTGFVTDNICKLPKLSNFTFSYNFFNGE 349
Cdd:PLN00113 269 QNKLSGPIPPSIFSLQKLISLDLSDNSLSGE 299
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 125-348 8.26e-25

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 111.48  E-value: 8.26e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  125 IDLNHADIAGYLPPEL---GLLTDVALFhvnSNRFCGVIPKSLSKLTLMYEFDVSNNRFVGPFPTVALSWPSLKFLDIRY 201
Cdd:PLN00113 361 LDLSTNNLTGEIPEGLcssGNLFKLILF---SNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISN 437

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  202 NDFEGKLPPEIFD-KDLDAIFLNNNRFESTIPETIGKSTASVVTFAHNKFSGCIPKTIGQMKNLNEIVFIGNNLSGCLPN 280
Cdd:PLN00113 438 NNLQGRINSRKWDmPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPD 517

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 30685162  281 EIGSLNNVTVFDASSNGFVGSLPSTLSGLANVEQMDFSYNKFTGFVTDNICKLPKLSNFTFSYNFFNG 348
Cdd:PLN00113 518 ELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 125-368 5.99e-24

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 108.78  E-value: 5.99e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  125 IDLNHADI-----AGYLPPELGLLTDVALFHVNSNRFCGVIPKSLSKLTLMYEFDVSNNRFVGPFPTVALSWPSLKFLDI 199
Cdd:PLN00113 236 TSLNHLDLvynnlTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHL 315

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  200 RYNDFEGKLPPEIFD-KDLDAIFLNNNRFESTIPETIGK-STASVVTFAHNKFSGCIPKTIGQMKNLNEIVFIGNNLSGC 277
Cdd:PLN00113 316 FSNNFTGKIPVALTSlPRLQVLQLWSNKFSGEIPKNLGKhNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGE 395

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  278 LPNEIGSLNNVTVFDASSNGFVGSLPSTLSGLANVEQMDFSYNKFTGFVTDNICKLPKLSNFTFSYNFFNGEAQSCVpGS 357
Cdd:PLN00113 396 IPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GS 474

                        250
                 ....*....|.
gi 30685162  358 SQEKQFDDTSN 368
Cdd:PLN00113 475 KRLENLDLSRN 485
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 125-349 1.18e-22

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 104.54  E-value: 1.18e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  125 IDLNHADIAGYLPPELGLLTDVALFHVNSNRFCGVIPKSLSKLTLMYEFDVSNNRFVGPFPTVALSWPSLKFLDIRYNDF 204
Cdd:PLN00113 169 LDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNL 248

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  205 EGKLPPEIFD-KDLDAIFLNNNRFESTIPETIGKSTASV-VTFAHNKFSGCIPKTIGQMKNLNEIVFIGNNLSGCLPNEI 282
Cdd:PLN00113 249 TGPIPSSLGNlKNLQYLFLYQNKLSGPIPPSIFSLQKLIsLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVAL 328

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 30685162  283 GSLNNVTVFDASSNGFVGSLPSTLSGLANVEQMDFSYNKFTGFVTDNICKLPKLSNFTFSYNFFNGE 349
Cdd:PLN00113 329 TSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGE 395
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
50-344 1.67e-21

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 98.47  E-value: 1.67e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  50 NGDLPDDIEYEVDLDLKFANNRLKRAYIALQAWKKAFYSDPFNTAANWVGPDVCSYKGVFCAPALDDPSVLVVAGIDLNH 129
Cdd:COG4886   2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLL 81

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162 130 ADIAGYLPPELGLLTDVALFHVNSNrfcgvipKSLSKLTLMYEFDVSNNRfVGPFPTVALSWPSLKFLDIRYNDFEgKLP 209
Cdd:COG4886  82 LSLLLLGLTDLGDLTNLTELDLSGN-------EELSNLTNLESLDLSGNQ-LTDLPEELANLTNLKELDLSNNQLT-DLP 152

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162 210 PEIFD-KDLDAIFLNNNRFEStIPETIGKSTA-SVVTFAHNKFSGcIPKTIGQMKNLNEIVFIGNNLSGcLPNEIGSLNN 287
Cdd:COG4886 153 EPLGNlTNLKSLDLSNNQLTD-LPEELGNLTNlKELDLSNNQITD-LPEPLGNLTNLEELDLSGNQLTD-LPEPLANLTN 229

                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 30685162 288 VTVFDASSNGFVgSLPStLSGLANVEQMDFSYNKFTGFvtDNICKLPKLSNFTFSYN 344
Cdd:COG4886 230 LETLDLSNNQLT-DLPE-LGNLTNLEELDLSNNQLTDL--PPLANLTNLKTLDLSNN 282
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 134-310 1.61e-19

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 94.53  E-value: 1.61e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  134 GYLPPELGLLTDVALFHVNSNRFCGVIPKSLSKLTLMYEFDVSNNRFVGPFPTVALSWPSLKFLDIRYNDFEGKLPPEIF 213
Cdd:PLN00113 394 GEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG 473

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  214 DKDLDAIFLNNNRFESTIPETIGK-----------------------STASVVTF--AHNKFSGCIPKTIGQMKNLNEIV 268
Cdd:PLN00113 474 SKRLENLDLSRNQFSGAVPRKLGSlselmqlklsenklsgeipdelsSCKKLVSLdlSHNQLSGQIPASFSEMPVLSQLD 553

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 30685162  269 FIGNNLSGCLPNEIGSLNNVTVFDASSNGFVGSLPSTLSGLA 310
Cdd:PLN00113 554 LSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLA 595
PspC_subgroup_2 NF033839
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
 420-621 1.12e-12

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 71.72  E-value: 1.12e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  420 PKKEINPPNLEEPSKPKPEESPKPQQPSPKPETPSHEPS-NPKEPKPESPKQESPKTEQPKPKPESPKQESPKQEAPKPE 498
Cdd:NF033839 295 PKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKpQPEKPKPEVKPQLETPKPEVKPQPEKPKPEVKPQPEKPKP 374

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  499 QPKPKPESPKQESSKQEPPKPEESPKPEPPKPEESPkpqpPKQETPKPEESPKPQPPKQETPKPEESPKPQP-PKQETPK 577
Cdd:NF033839 375 EVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEVK----PQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVkPQPEKPK 450

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 30685162  578 PEESPKPQPPKQEQPPKTEAPKMG-SPPLESPVPNDPYDASPIKK 621
Cdd:NF033839 451 PEVKPQPETPKPEVKPQPEKPKPEvKPQPEKPKPDNSKPQADDKK 495
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
136-351 1.53e-10

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 64.18  E-value: 1.53e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162 136 LPPELGLLTDVALFHVNSNRFcGVIPKSLSKLTLMYEFDVSNNRFVGpFPTVALSWPSLKFLDIRYNDFEgKLPPEIFD- 214
Cdd:COG4886 128 LPEELANLTNLKELDLSNNQL-TDLPEPLGNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQIT-DLPEPLGNl 204

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162 215 KDLDAIFLNNNRFeSTIPETIGKSTA-----------------------SVVTFAHNKFSGcIPKtIGQMKNLNEIVFIG 271
Cdd:COG4886 205 TNLEELDLSGNQL-TDLPEPLANLTNletldlsnnqltdlpelgnltnlEELDLSNNQLTD-LPP-LANLTNLKTLDLSN 281

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162 272 NNLSGCLPNEIGSLNNVTVFDASSNGFVGSLPSTLSGLANVEQMDFSYNKFTGFVTDNICKLPKLSNFTFSYNFFNGEAQ 351
Cdd:COG4886 282 NQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSL 361
PLN03150 PLN03150
hypothetical protein; Provisional
 206-285 8.29e-08

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 55.98  E-value: 8.29e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  206 GKLPPEIFD-KDLDAIFLNNNRFESTIPETIGKSTA-SVVTFAHNKFSGCIPKTIGQMKNLNEIVFIGNNLSGCLPNEIG 283
Cdd:PLN03150 432 GFIPNDISKlRHLQSINLSGNSIRGNIPPSLGSITSlEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALG 511


                 ..
gi 30685162  284 SL 285
Cdd:PLN03150 512 GR 513
PLN03150 PLN03150
hypothetical protein; Provisional
 252-326 7.62e-07

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 52.90  E-value: 7.62e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30685162  252 GCIPKTIGQMKNLNEIVFIGNNLSGCLPNEIGSLNNVTVFDASSNGFVGSLPSTLSGLANVEQMDFSYNKFTGFV 326
Cdd:PLN03150 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRV 506
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 420-636 3.66e-06

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 50.84  E-value: 3.66e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  420 PKKEINPPNLEEPSKPKPEESPKPQQPSPKPETP--SHEPSNPKEPK-PESPKQESPKTEQPKP-KPESPKqeSPKQEAP 495
Cdd:PTZ00449 582 PKDPKHPKDPEEPKKPKRPRSAQRPTRPKSPKLPelLDIPKSPKRPEsPKSPKRPPPPQRPSSPeRPEGPK--IIKSPKP 659

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  496 KPEQPKPKPESPKQ----ESSKQEPPKPEESPKPEPPKPEESPKPQPPKQETPKPEESPKPQPPKQ--------ETPKPE 563
Cdd:PTZ00449 660 PKSPKPPFDPKFKEkfydDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKLprdeefpfEPIGDP 739

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  564 ESPKPQPPKQETPKPEESPKPQPPKQEQPPK---------------TEAP-----KMGSPPLESPVPNDPYDASPIKKRR 623
Cdd:PTZ00449 740 DAEQPDDIEFFTPPEEERTFFHETPADTPLPdilaeefkeedihaeTGEPdeamkRPDSPSEHEDKPPGDHPSLPKKRHR 819

                        250
                 ....*....|...
gi 30685162  624 PQPPSPSTEETKT 636
Cdd:PTZ00449 820 LDGLALSTTDLES 832
PLN03150 PLN03150
hypothetical protein; Provisional
 274-357 8.02e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 49.81  E-value: 8.02e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  274 LSGCLPNEIGSLNNVTVFDASSNGFVGSLPSTLSGLANVEQMDFSYNKFTGFVTDNICKLPKLSNFTFSYNFFNGEaqsc 353
Cdd:PLN03150 430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGR---- 505


                 ....
gi 30685162  354 VPGS 357
Cdd:PLN03150 506 VPAA 509
PspC_subgroup_2 NF033839
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
 457-629 2.47e-05

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 48.23  E-value: 2.47e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  457 PSNPKEPKPESPKQESPKTEQPKPKPESPKQESPKQEAPkpeqpkpkpespkqesskqeppkpeespkpeppkpeespkp 536
Cdd:NF033839 284 PKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVK----------------------------------------- 322

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  537 qpPKQETPKPEESPKPQ------PPKQETPKPEESPKPQPPKQ------ETPKPEESPKPQPPKQEQPPKTEAPKMG-SP 603
Cdd:NF033839 323 --PQLEKPKPEVKPQPEkpkpevKPQLETPKPEVKPQPEKPKPevkpqpEKPKPEVKPQPETPKPEVKPQPEKPKPEvKP 400

                        170       180
                 ....*....|....*....|....*....
gi 30685162  604 PLESPVPN---DPYDASPIKKRRPQPPSP 629
Cdd:NF033839 401 QPEKPKPEvkpQPEKPKPEVKPQPEKPKP 429
PspC_subgroup_2 NF033839
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
 539-632 3.64e-05

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 47.46  E-value: 3.64e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  539 PKQETPKPEESPKPQPPKQ------ETPKPE-----ESPKPQP-PKQETPKPEESPKPQPPKQEQPPKTEAPKMG-SPPL 605
Cdd:NF033839 290 KKPSAPKPGMQPSPQPEKKevkpepETPKPEvkpqlEKPKPEVkPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEvKPQP 369

                         90       100
                 ....*....|....*....|....*...
gi 30685162  606 ESPVPN-DPYDASPIKKRRPQPPSPSTE 632
Cdd:NF033839 370 EKPKPEvKPQPETPKPEVKPQPEKPKPE 397
PLN03150 PLN03150
hypothetical protein; Provisional
 105-209 6.41e-05

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 46.73  E-value: 6.41e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  105 YKGVFCApaLDD-PSVLVVAGIDLNHADIAGYLPPELGLLTDVALFHVNSNRFCGVIPKSLSKLTLMYEFDVSNNRFVGP 183
Cdd:PLN03150 404 WSGADCQ--FDStKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGS 481

                         90       100
                 ....*....|....*....|....*.
gi 30685162  184 FPTVALSWPSLKFLDIRYNDFEGKLP 209
Cdd:PLN03150 482 IPESLGQLTSLRILNLNGNSLSGRVP 507
PRK11633 PRK11633
cell division protein DedD; Provisional
 537-580 1.15e-04

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 44.61  E-value: 1.15e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 30685162  537 QPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEE 580
Cdd:PRK11633  92 PPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKPEP 135
PHA03247 PHA03247
large tegument protein UL36; Provisional
 416-632 1.20e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 46.47  E-value: 1.20e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162   416 KAPEP------KKEINPPNLEEPSKPKP-----------------EESPKPQQPSPKPETPSHEPSNPKEPKPESPKQES 472
Cdd:PHA03247 2744 VPAGPatpggpARPARPPTTAGPPAPAPpaapaagpprrltrpavASLSESRESLPSPWDPADPPAAVLAPAAALPPAAS 2823

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162   473 PKTEQPKPKPESPKQESPKQEAPKPEQPKPKPESPKQESSKQEPPKPEESPKPEPPKPEESPKPQPPKQETPKPEESPKP 552
Cdd:PHA03247 2824 PAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPD 2903

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162   553 QPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQEQPPKTEAPKMGSPPleSPVPNDPYDAS------PIKKRRPQP 626
Cdd:PHA03247 2904 QPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEP--SGAVPQPWLGAlvpgrvAVPRFRVPQ 2981


                  ....*.
gi 30685162   627 PSPSTE 632
Cdd:PHA03247 2982 PAPSRE 2987
PspC_subgroup_2 NF033839
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...
 431-632 2.48e-04

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.


Pssm-ID: 468202 [Multi-domain]  Cd Length: 557  Bit Score: 44.76  E-value: 2.48e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  431 EPSKPKPEESPKPQQPSPKPET-PSHEPSNPKEPKPE-SPKQESPK----TEQPKPKPESPKQESPKQEAPKPEQPKPKP 504
Cdd:NF033839 158 KPETPQPENPEHQKPTTPAPDTkPSPQPEGKKPSVPDiNQEKEKAKlavaTYMSKILDDIQKHHLQKEKHRQIVALIKEL 237

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  505 ESPKQES-------SKQEPPKPEESPKPEPPKPEESPKPQPPKQETPKPEESPKPqppkqETPKPEESPKPQPPKQ---- 573
Cdd:NF033839 238 DELKKQAlseidnvNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKP-----SAPKPGMQPSPQPEKKevkp 312

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 30685162  574 --ETPKPEESPKPQPPKQEQPPKTEAPKMGSPP-LESPVPN-DPYDASPIKKRRPQPPSPSTE 632
Cdd:NF033839 313 epETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPqLETPKPEvKPQPEKPKPEVKPQPEKPKPE 375
PLN03150 PLN03150
hypothetical protein; Provisional
 217-309 6.78e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 43.65  E-value: 6.78e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  217 LDAIFLNNNRFESTIPETIGK-STASVVTFAHNKFSGCIPKTIGQMKNLNEIVFIGNNLSGCLPNEIGSLNNVTVFDASS 295
Cdd:PLN03150 420 IDGLGLDNQGLRGFIPNDISKlRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499

                         90
                 ....*....|....
gi 30685162  296 NGFVGSLPSTLSGL 309
Cdd:PLN03150 500 NSLSGRVPAALGGR 513
PRK11633 PRK11633
cell division protein DedD; Provisional
 537-599 1.59e-03

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 41.14  E-value: 1.59e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 30685162  537 QPPkqETPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQEQPPKTEAPK 599
Cdd:PRK11633  86 DPA--TVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKPEPKPVVEEKAAPT 146
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 538-635 1.70e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 42.10  E-value: 1.70e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  538 PPKQETPKPEESPKPQPPKQETPKPeesPKPQPPKQETPKPEespkpqppkqeqppKTEAPKMGSPPlesPVPNDPYDAS 617
Cdd:PRK14950 377 SPVRPTPAPSTRPKAAAAANIPPKE---PVRETATPPPVPPR--------------PVAPPVPHTPE---SAPKLTRAAI 436

                         90
                 ....*....|....*....
gi 30685162  618 PIK-KRRPQPPSPSTEETK 635
Cdd:PRK14950 437 PVDeKPKYTPPAPPKEEEK 455
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 437-605 2.37e-03

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 41.99  E-value: 2.37e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162   437 PEESPKPQQPSPKPETPSHEPSNPKEPKPESPKQE---SPKTEQPKPKPESPKQESPKQE---APKPEQPKPKPESPKQE 510
Cdd:PRK10263  336 PVEPVTQTPPVASVDVPPAQPTVAWQPVPGPQTGEpviAPAPEGYPQQSQYAQPAVQYNEplqQPVQPQQPYYAPAAEQP 415

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162   511 SSKQEPPKPEESPKPEPPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEEspkpQPPKQE 590
Cdd:PRK10263  416 AQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVE----QQPVVE 491

                         170
                  ....*....|....*
gi 30685162   591 QPPKTEAPKMGSPPL 605
Cdd:PRK10263  492 PEPVVEETKPARPPL 506
PRK13335 PRK13335
superantigen-like protein SSL3; Reviewed;
540-636 3.47e-03

superantigen-like protein SSL3; Reviewed;


Pssm-ID: 139494 [Multi-domain]  Cd Length: 356  Bit Score: 40.88  E-value: 3.47e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  540 KQETPKPEESPKPQPPKQETPKPEESPkpQPPKQETPKPEESPKPQPPKQEQPPKTEA----PKMGSPP---LESPVPND 612
Cdd:PRK13335  70 QERTPKLEKAPNTNEEKTSASKIEKIS--QPKQEEQKSLNISATPAPKQEQSQTTTESttpkTKVTTPPstnTPQPMQST 147

                         90       100
                 ....*....|....*....|....
gi 30685162  613 PYDaspikkrrpQPPSPSTEETKT 636
Cdd:PRK13335 148 KSD---------TPQSPTIKQAQT 162
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 457-632 3.76e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.12  E-value: 3.76e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  457 PSNPKEPKPESPKQESPKTEQPKPKPESPKQESPKQEAPKPEQPKPKPESPKQESSKQEPPKPEESPKPEPPKPEESPKP 536
Cdd:PRK07764 594 AAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKA 673

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  537 QPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQEQPPKTEAPKMGSPPLESPVPNDPYDA 616
Cdd:PRK07764 674 GGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAG 753

                        170
                 ....*....|....*.
gi 30685162  617 SPIKKRRPQPPSPSTE 632
Cdd:PRK07764 754 APAQPPPPPAPAPAAA 769
ftsN TIGR02223
cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a ...
 420-580 4.92e-03

cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a number of Proteobacteria. The N-terminal 30 residue region tends to by Lys/Arg-rich, and is followed by a membrane-spanning region. This is followed by an acidic low-complexity region of variable length and a well-conserved C-terminal domain of two tandem regions matched by pfam05036 (Sporulation related repeat), found in several cell division and sporulation proteins. The role of FtsN as a suppressor for other cell division mutations is poorly understood; it may involve cell wall hydrolysis. [Cellular processes, Cell division]


Pssm-ID: 274041 [Multi-domain]  Cd Length: 298  Bit Score: 40.06  E-value: 4.92e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162   420 PKKEINPPNLEEPSKPKPEESPKPQQPSPKPETPSHEPSNPKEPKP-ESPKQESPKTEQPKPKPESPKQESPKQEAPKPE 498
Cdd:TIGR02223  62 PKNQTENGETAADLPPKPEERWSYIEELEAREVLINDPEEPSNGGGvEESAQLTAEQRQLLEQMQADMRAAEKVLATAPS 141

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162   499 QPKPKPESPKQESSKQEPPKpeespkpeppkpeespkpQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKP 578
Cdd:TIGR02223 142 EQTVAVEARKQTAEKKPQKA------------------RTAEAQKTPVETEKIASKVKEAKQKQKALPKQTAETQSNSKP 203


                  ..
gi 30685162   579 EE 580
Cdd:TIGR02223 204 IE 205
PHA03378 PHA03378
EBNA-3B; Provisional
 424-630 5.47e-03

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 40.82  E-value: 5.47e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  424 INPPNLEEPSKPKPEESPKPQQPSPKPE--TPSHEPSNPKEPKPES--PKQESPKTEQPKPK---PESPKQESPKQEAPK 496
Cdd:PHA03378 638 MQPITFNVLVFPTPHQPPQVEITPYKPTwtQIGHIPYQPSPTGANTmlPIQWAPGTMQPPPRaptPMRPPAAPPGRAQRP 717

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  497 PEQPKPKPESPKQESSKQEPPKPEESPKPEPPKPEESPKPQPPKQETPKPEESP---KPQPPKQETPKPEESPK----PQ 569
Cdd:PHA03378 718 AAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPgapTPQPPPQAPPAPQQRPRgaptPQ 797

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 30685162  570 PPKQETPKPEE-------SPKPQPPKQEQPPKTEAPKMGSPPLESPvpndpydaSPIKKRRPQPPSPS 630
Cdd:PHA03378 798 PPPQAGPTSMQlmpraapGQQGPTKQILRQLLTGGVKRGRPSLKKP--------AALERQAAAGPTPS 857
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
426-571 7.04e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 40.24  E-value: 7.04e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  426 PPNLEEPSKPKPEESPKPQQPSPKPETPSHEPSNPKEPKPESPKQESPKTEQPKPKPESPKQESPKQEAPKPEQPKPKPE 505
Cdd:PRK12323 417 RAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDP 496

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 30685162  506 SPKQESSKQEPPKPEESPKPEPPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPP 571
Cdd:PRK12323 497 PPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVA 562
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 453-512 9.90e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 39.28  E-value: 9.90e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 30685162  453 PSHEPSNPKEPKPESPKQESPKTEQPKPKPESPKQESPKQEAPKPEQPKPKPESPKQESS 512
Cdd:PTZ00144 125 PAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVAR 184
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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