NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|15595728|ref|NP_249222|]
View 

glutamine amidotransferase [Pseudomonas aeruginosa PAO1]

Protein Classification

type 1 glutamine amidotransferase( domain architecture ID 10109690)

type 1 glutamine amidotransferase similar to Pseudomonas sp. gamma-glutamyl-L-alaninol (GALO) hydrolase, which catalyzes the hydrolysis of GALO to form L-alaninol and L-glutamate, and to Arabidopsis thaliana gamma-glutamyl peptidases, which hydrolyze the gamma-glutamyl peptide bond of glutathione conjugates

EC:  3.4.-.-
Gene Ontology:  GO:0016787
MEROPS:  C26
PubMed:  10387030
SCOP:  4003747

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
GATase1_1 cd01741
Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group ...
2-177 3.21e-67

Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.


:

Pssm-ID: 153212 [Multi-domain]  Cd Length: 188  Bit Score: 205.56  E-value: 3.21e-67
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728   2 RALVLQHVPFEGSARIGDWIGRHCEHE---HVCYLYADAHLPALDSFDLLVVMGGPMSVhDEAQYPWLVAEKRLIRAALD 78
Cdd:cd01741   1 RILILQHDTPEGPGLFEDLLREAGAETieiDVVDVYAGELLPDLDDYDGLVILGGPMSV-DEDDYPWLKKLKELIRQALA 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728  79 AGKKVLGICLGAQLLAQALGAAVRPGRQA-EIGWWPLHRYSQALGSPLGERLPERLMAFHWHGETFD-LPAGSVPLYGSA 156
Cdd:cd01741  80 AGKPVLGICLGHQLLARALGGKVGRNPKGwEIGWFPVTLTEAGKADPLFAGLPDEFPVFHWHGDTVVeLPPGAVLLASSE 159
                       170       180
                ....*....|....*....|.
gi 15595728 157 ACANQGFIWNEQAIGLQCHLE 177
Cdd:cd01741 160 ACPNQAFRYGDRALGLQFHPE 180
 
Name Accession Description Interval E-value
GATase1_1 cd01741
Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group ...
2-177 3.21e-67

Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.


Pssm-ID: 153212 [Multi-domain]  Cd Length: 188  Bit Score: 205.56  E-value: 3.21e-67
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728   2 RALVLQHVPFEGSARIGDWIGRHCEHE---HVCYLYADAHLPALDSFDLLVVMGGPMSVhDEAQYPWLVAEKRLIRAALD 78
Cdd:cd01741   1 RILILQHDTPEGPGLFEDLLREAGAETieiDVVDVYAGELLPDLDDYDGLVILGGPMSV-DEDDYPWLKKLKELIRQALA 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728  79 AGKKVLGICLGAQLLAQALGAAVRPGRQA-EIGWWPLHRYSQALGSPLGERLPERLMAFHWHGETFD-LPAGSVPLYGSA 156
Cdd:cd01741  80 AGKPVLGICLGHQLLARALGGKVGRNPKGwEIGWFPVTLTEAGKADPLFAGLPDEFPVFHWHGDTVVeLPPGAVLLASSE 159
                       170       180
                ....*....|....*....|.
gi 15595728 157 ACANQGFIWNEQAIGLQCHLE 177
Cdd:cd01741 160 ACPNQAFRYGDRALGLQFHPE 180
GuaA1 COG0518
GMP synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism]; GMP ...
2-230 1.19e-66

GMP synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism]; GMP synthase, glutamine amidotransferase domain is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 440284 [Multi-domain]  Cd Length: 225  Bit Score: 205.56  E-value: 1.19e-66
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728   2 RALVLQHVPFEGS--ARIGDWIGRHCEHEHVCYLYADAHLPA---LDSFDLLVVMGGPMSVHDEAqyPWLVAEKRLIRAA 76
Cdd:COG0518   1 KILILDHDPFGGQypGLIARRLREAGIELDVLRVYAGEILPYdpdLEDPDGLILSGGPMSVYDED--PWLEDEPALIREA 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728  77 LDAGKKVLGICLGAQLLAQALGAAVRPGRQAEIGWWPLHRYSQalgSPLGERLPERLMAFHWHGETFD-LPAGSVPLYGS 155
Cdd:COG0518  79 FELGKPVLGICYGAQLLAHALGGKVEPGPGREIGWAPVELTEA---DPLFAGLPDEFTVWMSHGDTVTeLPEGAEVLASS 155
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15595728 156 AACANQGFIWNEQAIGLQCHLESTAESIEALLDACPQDLQREgavqsaGRIRQGVAHCREVAPVLFLLLDYLAHR 230
Cdd:COG0518 156 DNCPNQAFRYGRRVYGVQFHPEVTHTMMEAWLEERADELAAE------ELLAEASLHDPELREAGRRLLRNFLRE 224
PRK07053 PRK07053
glutamine amidotransferase; Provisional
2-187 2.14e-57

glutamine amidotransferase; Provisional


Pssm-ID: 235919 [Multi-domain]  Cd Length: 234  Bit Score: 182.07  E-value: 2.14e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728    2 RALVLQHVPFEGSARIGDWIGRHceHEHVCYLYA---DAHLPALDSFDLLVVMGGPMSVHDEAQYPWLVAEKRLIRAALD 78
Cdd:PRK07053   4 TAVAIRHVAFEDLGSFEQVLGAR--GYRVRYVDVgvdDLETLDALEPDLLVVLGGPIGVYDDELYPFLAPEIALLRQRLA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728   79 AGKKVLGICLGAQLLAQALGAAVRPGRQAEIGWWPLHRYSQALGSPLGErLPERLMAFHWHGETFDLPAGSVPLYGSAAC 158
Cdd:PRK07053  82 AGLPTLGICLGAQLIARALGARVYPGGQKEIGWAPLTLTDAGRASPLRH-LGAGTPVLHWHGDTFDLPEGATLLASTPAC 160
                        170       180
                 ....*....|....*....|....*....
gi 15595728  159 ANQGFIWNEQAIGLQCHLESTAESIEALL 187
Cdd:PRK07053 161 RHQAFAWGNHVLALQFHPEAREDRFEAWL 189
GATase pfam00117
Glutamine amidotransferase class-I;
45-179 1.30e-13

Glutamine amidotransferase class-I;


Pssm-ID: 395067 [Multi-domain]  Cd Length: 188  Bit Score: 66.88  E-value: 1.30e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728    45 FDLLVVMGGPMSVHDEAQypwlvaEKRLIRAALDAGKKVLGICLGAQLLAQALGAAVRPGRQAEIGWW--PLHRYSQALG 122
Cdd:pfam00117  41 PDGIILSGGPGSPGAAGG------AIEAIREARELKIPILGICLGHQLLALAFGGKVVKAKKFGHHGKnsPVGDDGCGLF 114
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15595728   123 SPLGERLPERlmafHWHGETFD---LPAGSVPLYGSA-ACANQGFIWNEQAI-GLQCHLEST 179
Cdd:pfam00117 115 YGLPNVFIVR----RYHSYAVDpdtLPDGLEVTATSEnDGTIMGIRHKKLPIfGVQFHPESI 172
 
Name Accession Description Interval E-value
GATase1_1 cd01741
Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group ...
2-177 3.21e-67

Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.


Pssm-ID: 153212 [Multi-domain]  Cd Length: 188  Bit Score: 205.56  E-value: 3.21e-67
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728   2 RALVLQHVPFEGSARIGDWIGRHCEHE---HVCYLYADAHLPALDSFDLLVVMGGPMSVhDEAQYPWLVAEKRLIRAALD 78
Cdd:cd01741   1 RILILQHDTPEGPGLFEDLLREAGAETieiDVVDVYAGELLPDLDDYDGLVILGGPMSV-DEDDYPWLKKLKELIRQALA 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728  79 AGKKVLGICLGAQLLAQALGAAVRPGRQA-EIGWWPLHRYSQALGSPLGERLPERLMAFHWHGETFD-LPAGSVPLYGSA 156
Cdd:cd01741  80 AGKPVLGICLGHQLLARALGGKVGRNPKGwEIGWFPVTLTEAGKADPLFAGLPDEFPVFHWHGDTVVeLPPGAVLLASSE 159
                       170       180
                ....*....|....*....|.
gi 15595728 157 ACANQGFIWNEQAIGLQCHLE 177
Cdd:cd01741 160 ACPNQAFRYGDRALGLQFHPE 180
GuaA1 COG0518
GMP synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism]; GMP ...
2-230 1.19e-66

GMP synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism]; GMP synthase, glutamine amidotransferase domain is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 440284 [Multi-domain]  Cd Length: 225  Bit Score: 205.56  E-value: 1.19e-66
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728   2 RALVLQHVPFEGS--ARIGDWIGRHCEHEHVCYLYADAHLPA---LDSFDLLVVMGGPMSVHDEAqyPWLVAEKRLIRAA 76
Cdd:COG0518   1 KILILDHDPFGGQypGLIARRLREAGIELDVLRVYAGEILPYdpdLEDPDGLILSGGPMSVYDED--PWLEDEPALIREA 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728  77 LDAGKKVLGICLGAQLLAQALGAAVRPGRQAEIGWWPLHRYSQalgSPLGERLPERLMAFHWHGETFD-LPAGSVPLYGS 155
Cdd:COG0518  79 FELGKPVLGICYGAQLLAHALGGKVEPGPGREIGWAPVELTEA---DPLFAGLPDEFTVWMSHGDTVTeLPEGAEVLASS 155
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15595728 156 AACANQGFIWNEQAIGLQCHLESTAESIEALLDACPQDLQREgavqsaGRIRQGVAHCREVAPVLFLLLDYLAHR 230
Cdd:COG0518 156 DNCPNQAFRYGRRVYGVQFHPEVTHTMMEAWLEERADELAAE------ELLAEASLHDPELREAGRRLLRNFLRE 224
PRK07053 PRK07053
glutamine amidotransferase; Provisional
2-187 2.14e-57

glutamine amidotransferase; Provisional


Pssm-ID: 235919 [Multi-domain]  Cd Length: 234  Bit Score: 182.07  E-value: 2.14e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728    2 RALVLQHVPFEGSARIGDWIGRHceHEHVCYLYA---DAHLPALDSFDLLVVMGGPMSVHDEAQYPWLVAEKRLIRAALD 78
Cdd:PRK07053   4 TAVAIRHVAFEDLGSFEQVLGAR--GYRVRYVDVgvdDLETLDALEPDLLVVLGGPIGVYDDELYPFLAPEIALLRQRLA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728   79 AGKKVLGICLGAQLLAQALGAAVRPGRQAEIGWWPLHRYSQALGSPLGErLPERLMAFHWHGETFDLPAGSVPLYGSAAC 158
Cdd:PRK07053  82 AGLPTLGICLGAQLIARALGARVYPGGQKEIGWAPLTLTDAGRASPLRH-LGAGTPVLHWHGDTFDLPEGATLLASTPAC 160
                        170       180
                 ....*....|....*....|....*....
gi 15595728  159 ANQGFIWNEQAIGLQCHLESTAESIEALL 187
Cdd:PRK07053 161 RHQAFAWGNHVLALQFHPEAREDRFEAWL 189
PRK08250 PRK08250
glutamine amidotransferase; Provisional
1-227 1.15e-34

glutamine amidotransferase; Provisional


Pssm-ID: 181323 [Multi-domain]  Cd Length: 235  Bit Score: 123.54  E-value: 1.15e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728    1 MRALVLQHVPFEGSARIGDWIGRHCEHEHVCYLYADAHLPA-LDSFDLLVVMGGPMS-VHDEAQYPWL--VAEKRLIRAA 76
Cdd:PRK08250   1 MRVHFIIHESFEAPGAYLKWAENRGYDISYSRVYAGEALPEnADGFDLLIVMGGPQSpRTTREECPYFdsKAEQRLINQA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728   77 LDAGKKVLGICLGAQLLAQALGAAVRPGRQAEIGWWPLHRYSQALGSPLGERLPERLMAFHWHGETFDLPAGSVPLYGSA 156
Cdd:PRK08250  81 IKAGKAVIGVCLGAQLIGEALGAKYEHSPEKEIGYFPITLTEAGLKDPLLSHFGSTLTVGHWHNDMPGLTDQAKVLATSE 160
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15595728  157 ACANQGFIWNEQAIGLQCHLESTAESIEALLDACPQDLQREGA---VQSAGRIRqgvAH-CREVAPVLFLLLDYL 227
Cdd:PRK08250 161 GCPRQIVQYSNLVYGFQCHMEFTVEAVELLIAHSQQELSQAQGkrfVQSPEELR---AWdYSEMNQKLFRFLDKL 232
PRK06490 PRK06490
glutamine amidotransferase; Provisional
39-179 1.35e-27

glutamine amidotransferase; Provisional


Pssm-ID: 180590 [Multi-domain]  Cd Length: 239  Bit Score: 105.43  E-value: 1.35e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728   39 LPA-LDSFDLLVVMGGPMSVHDEaqYPWLVAEKRLIRAALDAGKKVLGICLGAQLLAQALGAAVRPGRQ--AEIGWWPLH 115
Cdd:PRK06490  46 LPDtLEDHAGAVIFGGPMSANDP--DDFIRREIDWISVPLKENKPFLGICLGAQMLARHLGARVAPHPDgrVEIGYYPLR 123
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15595728  116 rysqalGSPLGERL---PErlMAFHWHGETFDLPAGSVPLYGSAACANQGFIWNEQAIGLQCHLEST 179
Cdd:PRK06490 124 ------PTEAGRALmhwPE--MVYHWHREGFDLPAGAELLATGDDFPNQAFRYGDNAWGLQFHPEVT 182
PRK09065 PRK09065
glutamine amidotransferase; Provisional
18-229 3.07e-18

glutamine amidotransferase; Provisional


Pssm-ID: 181635 [Multi-domain]  Cd Length: 237  Bit Score: 80.39  E-value: 3.07e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728   18 GDWIGR---HCEHE-HVCYLYADAHLPALDSFDLLVVMGGPMSVHDEAqyPWLVAEKRLIRAALDAGKKVLGICLGAQLL 93
Cdd:PRK09065  24 PHWIRValgLAEQPvVVVRVFAGEPLPAPDDFAGVIITGSWAMVTDRL--DWSERTADWLRQAAAAGMPLLGICYGHQLL 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728   94 AQALGAAV--RP-GRqaEIGWWPLHRYSQALGSPLGERLPERLMAFHWHGET-FDLPAGSVPLYGSAACANQGFIWNEQA 169
Cdd:PRK09065 102 AHALGGEVgyNPaGR--ESGTVTVELHPAAADDPLFAGLPAQFPAHLTHLQSvLRLPPGAVVLARSAQDPHQAFRYGPHA 179
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728  170 IGLQCHLESTAESIEALLDACPQDLQREGavQSAGRIRQGVAHCREVAPvlfLLLDYLAH 229
Cdd:PRK09065 180 WGVQFHPEFTAHIMRAYLRARADCLRREG--LDARTLLREVSEAPWARK---LLRRFVRL 234
GATase pfam00117
Glutamine amidotransferase class-I;
45-179 1.30e-13

Glutamine amidotransferase class-I;


Pssm-ID: 395067 [Multi-domain]  Cd Length: 188  Bit Score: 66.88  E-value: 1.30e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728    45 FDLLVVMGGPMSVHDEAQypwlvaEKRLIRAALDAGKKVLGICLGAQLLAQALGAAVRPGRQAEIGWW--PLHRYSQALG 122
Cdd:pfam00117  41 PDGIILSGGPGSPGAAGG------AIEAIREARELKIPILGICLGHQLLALAFGGKVVKAKKFGHHGKnsPVGDDGCGLF 114
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15595728   123 SPLGERLPERlmafHWHGETFD---LPAGSVPLYGSA-ACANQGFIWNEQAI-GLQCHLEST 179
Cdd:pfam00117 115 YGLPNVFIVR----RYHSYAVDpdtLPDGLEVTATSEnDGTIMGIRHKKLPIfGVQFHPESI 172
GATase1_GMP_Synthase cd01742
Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase; Type 1 glutamine ...
52-179 2.07e-11

Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase; Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase. GMP synthetase is a glutamine amidotransferase from the de novo purine biosynthetic pathway. Glutamine amidotransferase (GATase) activity catalyse the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. GMP synthetase catalyses the amination of the nucleotide precursor xanthosine 5'-monophosphate to form GMP. GMP synthetase belongs to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site.


Pssm-ID: 153213 [Multi-domain]  Cd Length: 181  Bit Score: 60.63  E-value: 2.07e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728  52 GGPMSVHDEAQYpwlvaekRLIRAALDAGKKVLGICLGAQLLAQALGAAVRPGRQAEIGwwpLHRYSQALGSPLGERLPE 131
Cdd:cd01742  49 GGPSSVYEEDAP-------RVDPEIFELGVPVLGICYGMQLIAKALGGKVERGDKREYG---KAEIEIDDSSPLFEGLPD 118
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
gi 15595728 132 RLMAFHWHGETFD-LPAGSVPLYGSAACANQGFIWNEQAI-GLQCHLEST 179
Cdd:cd01742 119 EQTVWMSHGDEVVkLPEGFKVIASSDNCPVAAIANEEKKIyGVQFHPEVT 168
PLN02347 PLN02347
GMP synthetase
21-179 5.32e-10

GMP synthetase


Pssm-ID: 215197 [Multi-domain]  Cd Length: 536  Bit Score: 58.93  E-value: 5.32e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728   21 IGRHCEHEHVC--YLYADAHLPALDSFDLLVVM--GGPMSVHDEAQyPwLVAEKrLIRAALDAGKKVLGICLGAQLLAQA 96
Cdd:PLN02347  26 ITRRVRELGVYslLLSGTASLDRIASLNPRVVIlsGGPHSVHVEGA-P-TVPEG-FFDYCRERGVPVLGICYGMQLIVQK 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728   97 LGAAVRPGRQAEIGWWPLHrysQALGSPLGERLPERLMAFHW--HG-ETFDLPAGSVPLYGSAACANQGFIWNEQAI-GL 172
Cdd:PLN02347 103 LGGEVKPGEKQEYGRMEIR---VVCGSQLFGDLPSGETQTVWmsHGdEAVKLPEGFEVVAKSVQGAVVAIENRERRIyGL 179

                 ....*..
gi 15595728  173 QCHLEST 179
Cdd:PLN02347 180 QYHPEVT 186
PRK05665 PRK05665
amidotransferase; Provisional
40-189 1.96e-09

amidotransferase; Provisional


Pssm-ID: 168162 [Multi-domain]  Cd Length: 240  Bit Score: 55.97  E-value: 1.96e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728   40 PALDSFDLLVVMGgpmSVHDE-AQYPWLVAEKRLIRAALDAGKKVLGICLGAQLLAQALGAAVrpgRQAEIGWWP-LHRY 117
Cdd:PRK05665  53 ADDEKFDAYLVTG---SKADSfGTDPWIQTLKTYLLKLYERGDKLLGVCFGHQLLALLLGGKA---ERASQGWGVgIHRY 126
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15595728  118 SQALGSPLGErlPER----LMAFHwHGETFDLPAGSVPLYGSAACANQGFIWNEQAIGLQCHLESTAESIEALLDA 189
Cdd:PRK05665 127 QLAAHAPWMS--PAVteltLLISH-QDQVTALPEGATVIASSDFCPFAAYHIGDQVLCFQGHPEFVHDYSRALLDL 199
GATase1 cd01653
Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase ...
39-93 2.42e-09

Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA. and, the A4 beta-galactosidase middle domain. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. For Pyrococcus horikoshii PH1704, the Cys of the nucleophile elbow together with a different His and, a Glu from an adjacent monomer form a catalytic triad different from the typical GATase1 triad. The E. coli HP-II C-terminal domain, S. meliloti Rm1021 ThuA and the A4 beta-galactosidase middle domain lack the catalytic triad typical GATaseI domains. GATase1-like domains can occur either as single polypeptides, as in Class I glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.


Pssm-ID: 153210 [Multi-domain]  Cd Length: 115  Bit Score: 53.37  E-value: 2.42e-09
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 15595728  39 LPALDSFDLLVVMGGPMSVHDEAqypWLVAEKRLIRAALDAGKKVLGICLGAQLL 93
Cdd:cd01653  41 DVDLDDYDGLILPGGPGTPDDLA---RDEALLALLREAAAAGKPILGICLGAQLL 92
GAT_1 cd03128
Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase ...
39-93 4.75e-09

Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase (GATase1)-like domain. This group contains proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA, the A4 beta-galactosidase middle domain and peptidase E. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase (CPSase), cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. For Pyrococcus horikoshii PH1704, the Cys of the nucleophile elbow together with a different His and, a Glu from an adjacent monomer form a catalytic triad different from the typical GATase1 triad. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad of typical GATase1 domains, by having a Ser in place of the reactive Cys at the nucleophile elbow. The E. coli HP-II C-terminal domain, S. meliloti Rm1021 ThuA and the A4 beta-galactosidase middle domain lack the catalytic triad typical GATaseI domains. GATase1-like domains can occur either as single polypeptides, as in Class I glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase. Peptidase E has a circular permutation in the common core of a typical GTAse1 domain.


Pssm-ID: 153222 [Multi-domain]  Cd Length: 92  Bit Score: 52.20  E-value: 4.75e-09
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 15595728  39 LPALDSFDLLVVMGGPMSVHDEAqypWLVAEKRLIRAALDAGKKVLGICLGAQLL 93
Cdd:cd03128  41 DVDLDDYDGLILPGGPGTPDDLA---WDEALLALLREAAAAGKPVLGICLGAQLL 92
guaA PRK00074
GMP synthase; Reviewed
52-110 7.68e-09

GMP synthase; Reviewed


Pssm-ID: 234614 [Multi-domain]  Cd Length: 511  Bit Score: 55.44  E-value: 7.68e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 15595728   52 GGPMSVHDEAQYpwlvaekRLIRAALDAGKKVLGICLGAQLLAQALGAAVRPGRQAEIG 110
Cdd:PRK00074  54 GGPASVYEEGAP-------RADPEIFELGVPVLGICYGMQLMAHQLGGKVERAGKREYG 105
PRK07567 PRK07567
glutamine amidotransferase; Provisional
36-189 2.77e-08

glutamine amidotransferase; Provisional


Pssm-ID: 181035 [Multi-domain]  Cd Length: 242  Bit Score: 52.64  E-value: 2.77e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728   36 DAHLPALDSFDLLVVMGGPMSVHD--EAQYPWLVAEKRLIRAALDAGKK----VLGICLGAQLLAQALGAAVRPGRQAEI 109
Cdd:PRK07567  43 PLPDLDLDDYSGVIVGGSPFNVSDpaESKSPWQRRVEAELSGLLDEVVArdfpFLGACYGVGTLGHHQGGVVDRTYGEPV 122
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728  110 GWWPLHRYSQALGSPLGERLPERLMAFHWHGE-TFDLPAGSVPLYGSAACANQGFIWNEQAIGLQCHLESTAESIEALLD 188
Cdd:PRK07567 123 GAVTVSLTDAGRADPLLAGLPDTFTAFVGHKEaVSALPPGAVLLATSPTCPVQMFRVGENVYATQFHPELDADGLKTRID 202

                 .
gi 15595728  189 A 189
Cdd:PRK07567 203 F 203
GATase1_2 cd01745
Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group ...
42-98 1.63e-06

Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.


Pssm-ID: 153216 [Multi-domain]  Cd Length: 189  Bit Score: 47.19  E-value: 1.63e-06
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15595728  42 LDSFDLLVVMGGPmSVHD----EAQYPWLVA--------EKRLIRAALDAGKKVLGICLGAQLLAQALG 98
Cdd:cd01745  51 LELLDGLLLTGGG-DVDPplygEEPHPELGPidperdafELALLRAALERGKPILGICRGMQLLNVALG 118
CarA COG0505
Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism, Nucleotide ...
72-99 3.69e-06

Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism, Nucleotide transport and metabolism]; Carbamoylphosphate synthase small subunit is part of the Pathway/BioSystem: Arginine biosynthesis


Pssm-ID: 440271 [Multi-domain]  Cd Length: 361  Bit Score: 46.94  E-value: 3.69e-06
                        10        20
                ....*....|....*....|....*...
gi 15595728  72 LIRAALDAGKKVLGICLGAQLLAQALGA 99
Cdd:COG0505 239 TIRELLGKGIPIFGICLGHQLLALALGA 266
PuuD COG2071
Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD (putrescine degradation), contains ...
69-116 6.73e-06

Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD (putrescine degradation), contains GATase1-like domain [Amino acid transport and metabolism];


Pssm-ID: 441674 [Multi-domain]  Cd Length: 231  Bit Score: 45.54  E-value: 6.73e-06
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 15595728  69 EKRLIRAALDAGKKVLGICLGAQLLAQALG-------AAVRPG----RQAEIGWWPLHR 116
Cdd:COG2071  85 ELALIRAALERGKPVLGICRGMQLLNVALGgtlyqdlPDQVPGaldhRQPAPRYAPRHT 143
GATase1_CPSase cd01744
Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II; This ...
45-99 1.19e-05

Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II; This group of sequences represents the small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II. CPSase II catalyzes the production of carbomyl phosphate (CP) from bicarbonate, glutamine and two molecules of MgATP. The reaction is believed to proceed by a series of four biochemical reactions involving a minimum of three discrete highly reactive intermediates. The synthesis of CP is critical for the initiation of two separate biosynthetic pathways. In one CP is coupled to aspartate, its carbon and nitrogen nuclei ultimately incorporated into the aromatic moieties of pyrimidine nucleotides. In the second pathway CP is condensed with ornithine at the start of the urea cycle and is utilized for the detoxification of ammonia and biosynthesis of arginine. CPSases may be encoded by one or by several genes, depending on the species. The E.coli enzyme is a heterodimer consisting of two polypeptide chains referred to as the small and large subunit. Ammonia an intermediate during the biosynthesis of carbomyl phosphate produced by the hydrolysis of glutamine in the small subunit of the enzyme is delivered via a molecular tunnel between the remotely located carboxyphosphate active site in the large subunit. CPSase IIs belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site. This group also contains the sequence from the mammalian urea cycle form which has lost the active site Cys, resulting in an ammonia-dependent form, CPSase I.


Pssm-ID: 153215 [Multi-domain]  Cd Length: 178  Bit Score: 44.41  E-value: 1.19e-05
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 15595728  45 FDLLVVMGGPmsvHDEAQYPWLVAEkrlIRAALDAGKKVLGICLGAQLLAQALGA 99
Cdd:cd01744  40 PDGIFLSNGP---GDPALLDEAIKT---VRKLLGKKIPIFGICLGHQLLALALGA 88
PRK12564 PRK12564
carbamoyl-phosphate synthase small subunit;
72-99 2.77e-05

carbamoyl-phosphate synthase small subunit;


Pssm-ID: 237139 [Multi-domain]  Cd Length: 360  Bit Score: 44.30  E-value: 2.77e-05
                         10        20
                 ....*....|....*....|....*...
gi 15595728   72 LIRAALDAGKKVLGICLGAQLLAQALGA 99
Cdd:PRK12564 240 MIRELLEKKIPIFGICLGHQLLALALGA 267
GATase1_Anthranilate_Synthase cd01743
Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase; Type 1 ...
39-109 3.56e-05

Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase; Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase (ASase). This group contains proteins similar to para-aminobenzoate (PABA) synthase and ASase. These enzymes catalyze similar reactions and produce similar products, PABA and ortho-aminobenzoate (anthranilate). Each enzyme is composed of non-identical subunits: a glutamine amidotransferase subunit (component II) and a subunit that produces an aminobenzoate products (component I). ASase catalyses the synthesis of anthranilate from chorismate and glutamine and is a tetrameric protein comprising two copies each of components I and II. Component II of ASase belongs to the family of triad GTases which hydrolyze glutamine and transfer nascent ammonia between the active sites. In some bacteria, such as Escherichia coli, component II can be much larger than in other organisms, due to the presence of phosphoribosyl-anthranilate transferase (PRTase) activity. PRTase catalyses the second step in tryptophan biosynthesis and results in the addition of 5-phosphoribosyl-1-pyrophosphate to anthranilate to create N-5'-phosphoribosyl-anthranilate. In E.coli, the first step in the conversion of chorismate to PABA involves two proteins: PabA and PabB which co-operate to transfer the amide nitrogen of glutamine to chorismate forming 4-amino-4 deoxychorismate (ADC). PabA acts as a glutamine amidotransferase, supplying an amino group to PabB, which carries out the amination reaction. A third protein PabC then mediates elimination of pyruvate and aromatization to give PABA. Several organisms have bipartite proteins containing fused domains homologous to PabA and PabB commonly called PABA synthases. These hybrid PABA synthases may produce ADC and not PABA.


Pssm-ID: 153214 [Multi-domain]  Cd Length: 184  Bit Score: 42.91  E-value: 3.56e-05
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15595728  39 LPALDSFDLLVVMGGPMSVHDEAQYPWlvaekrlIRAALDAGKKVLGICLGAQLLAQALGAAVRP------GRQAEI 109
Cdd:cd01743  37 ELELLNPDAIVISPGPGHPEDAGISLE-------IIRALAGKVPILGVCLGHQAIAEAFGGKVVRapepmhGKTSEI 106
PRK00758 PRK00758
GMP synthase subunit A; Validated
76-110 4.04e-05

GMP synthase subunit A; Validated


Pssm-ID: 179112 [Multi-domain]  Cd Length: 184  Bit Score: 42.92  E-value: 4.04e-05
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 15595728   76 ALDAGKKVLGICLGAQLLAQALGAAVRPGRQAEIG 110
Cdd:PRK00758  63 LKELDVPILGICLGHQLIAKAFGGEVGRGEYGEYA 97
GATase1_AraC_1 cd03137
AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like ...
33-96 4.05e-05

AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain; A subgroup of AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain. AraC regulators are defined by a AraC-type helix-turn-helix DNA binding domain at their C-terminal. AraC family transcriptional regulators are widespread among bacteria and are involved in regulating diverse and important biological functions, including carbon metabolism, stress responses and virulence in different microorganisms. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with typical GATase1domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.


Pssm-ID: 153231 [Multi-domain]  Cd Length: 187  Bit Score: 42.87  E-value: 4.05e-05
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15595728  33 LYADAHLPALDSFDLLVVMGGPMSVHDEAQyPWLVAekrLIRAALDAGKKVLGICLGAQLLAQA 96
Cdd:cd03137  53 LVADAGLDALAAADTVIVPGGPDVDGRPPP-PALLA---ALRRAAARGARVASVCTGAFVLAEA 112
Peptidase_C26 pfam07722
Peptidase C26; These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze ...
69-98 4.17e-05

Peptidase C26; These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C terminus.


Pssm-ID: 429620 [Multi-domain]  Cd Length: 219  Bit Score: 43.40  E-value: 4.17e-05
                          10        20        30
                  ....*....|....*....|....*....|
gi 15595728    69 EKRLIRAALDAGKKVLGICLGAQLLAQALG 98
Cdd:pfam07722  94 ELALIRAALARGKPILGICRGFQLLNVALG 123
YajL COG0693
Protein/nucleotide deglycase, PfpI/YajL/DJ-1 family (repair of methylglyoxal-glycated proteins ...
42-96 1.14e-04

Protein/nucleotide deglycase, PfpI/YajL/DJ-1 family (repair of methylglyoxal-glycated proteins and nucleic acids) [Defense mechanisms];


Pssm-ID: 440457 [Multi-domain]  Cd Length: 170  Bit Score: 41.24  E-value: 1.14e-04
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 15595728  42 LDSFDLLVVMGGPMSVHDEAQYPWLVaekRLIRAALDAGKKVLGICLGAQLLAQA 96
Cdd:COG0693  62 PDDYDALVLPGGHGAPDDLREDPDVV---ALVREFYEAGKPVAAICHGPAVLAAA 113
GlxA COG4977
Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH ...
35-96 2.07e-04

Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription];


Pssm-ID: 444002 [Multi-domain]  Cd Length: 318  Bit Score: 41.68  E-value: 2.07e-04
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15595728  35 ADAHLPALDSFDLLVVMGGPmsVHDEAQYPWLVAekrLIRAALDAGKKVLGICLGAQLLAQA 96
Cdd:COG4977  57 PDHGLADLAAADTLIVPGGL--DPAAAADPALLA---WLRRAAARGARLASICTGAFLLAAA 113
hisH PRK13146
imidazole glycerol phosphate synthase subunit HisH; Provisional
71-113 2.26e-04

imidazole glycerol phosphate synthase subunit HisH; Provisional


Pssm-ID: 237290 [Multi-domain]  Cd Length: 209  Bit Score: 40.92  E-value: 2.26e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 15595728   71 RLIRAALDAGKKVLGICLGAQLLAQalgAAVRPGRQAEIGWWP 113
Cdd:PRK13146  68 AVIEAVLAAGRPFLGICVGMQLLFE---RGLEHGDTPGLGLIP 107
HisH COG0118
Imidazoleglycerol phosphate synthase glutamine amidotransferase subunit HisH [Amino acid ...
71-94 5.01e-04

Imidazoleglycerol phosphate synthase glutamine amidotransferase subunit HisH [Amino acid transport and metabolism]; Imidazoleglycerol phosphate synthase glutamine amidotransferase subunit HisH is part of the Pathway/BioSystem: Histidine biosynthesis


Pssm-ID: 439888 [Multi-domain]  Cd Length: 196  Bit Score: 39.64  E-value: 5.01e-04
                        10        20
                ....*....|....*....|....
gi 15595728  71 RLIRAALDAGKKVLGICLGAQLLA 94
Cdd:COG0118  64 EAIREAVAGGKPVLGICLGMQLLF 87
COG3442 COG3442
Glutamine amidotransferase related to the GATase domain of CobQ [General function prediction ...
42-95 8.39e-04

Glutamine amidotransferase related to the GATase domain of CobQ [General function prediction only];


Pssm-ID: 442666 [Multi-domain]  Cd Length: 241  Bit Score: 39.39  E-value: 8.39e-04
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 15595728  42 LDSFDLLVVMGGPMS----VHDEaqypwLVAEKRLIRAALDAGKKVLGICLGAQLLAQ 95
Cdd:COG3442  48 FDDVDIVFIGGGQDReqeiVADD-----LLRIKDALRAAIEDGVPVLAICGGYQLLGH 100
PabA COG0512
Anthranilate/para-aminobenzoate synthase component II (glutamine amidotransferase) [Amino acid ...
72-115 1.58e-03

Anthranilate/para-aminobenzoate synthase component II (glutamine amidotransferase) [Amino acid transport and metabolism, Coenzyme transport and metabolism]; Anthranilate/para-aminobenzoate synthase component II (glutamine amidotransferase) is part of the Pathway/BioSystem: Aromatic amino acid biosynthesis


Pssm-ID: 440278 [Multi-domain]  Cd Length: 189  Bit Score: 38.10  E-value: 1.58e-03
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*
gi 15595728  72 LIRAAldAGKK-VLGICLGAQLLAQALGAAVRPGRQaeigwwPLH 115
Cdd:COG0512  64 VIRAF--AGKIpILGVCLGHQAIGEAFGGKVVRAPE------PMH 100
GATase1_AraC_ArgR_like cd03136
AraC transcriptional regulators having an N-terminal Type 1 glutamine amidotransferase ...
35-96 1.64e-03

AraC transcriptional regulators having an N-terminal Type 1 glutamine amidotransferase (GATase1)-like domain; A subgroup of AraC transcriptional regulators having an N-terminal Type 1 glutamine amidotransferase (GATase1)-like domain. This group contains proteins similar to the Pseudomonas aeruginosa ArgR regulator. ArgR functions in the control of expression of certain genes of arginine biosynthesis and catabolism. AraC regulators are defined by a AraC-type helix-turn-helix DNA binding domain at their C-terminal. AraC family transcriptional regulators are widespread among bacteria and are involved in regulating diverse and important biological functions, including carbon metabolism, stress responses and virulence in different microorganisms. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with typical GATase1domains a reactive cys residue is found in some sequences in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.


Pssm-ID: 153230 [Multi-domain]  Cd Length: 185  Bit Score: 38.34  E-value: 1.64e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15595728  35 ADAHLPALDSFDLLVVMGGPMsvHDEAQYPWLVAekrLIRAALDAGKKVLGICLGAQLLAQA 96
Cdd:cd03136  55 PDAALEDAPPLDYLFVVGGLG--ARRAVTPALLA---WLRRAARRGVALGGIDTGAFLLARA 111
PRK05670 PRK05670
anthranilate synthase component II; Provisional
72-106 2.88e-03

anthranilate synthase component II; Provisional


Pssm-ID: 235552 [Multi-domain]  Cd Length: 189  Bit Score: 37.42  E-value: 2.88e-03
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 15595728   72 LIRAAldAGKK-VLGICLGAQLLAQALGAAVRPGRQ 106
Cdd:PRK05670  65 LIREF--AGKVpILGVCLGHQAIGEAFGGKVVRAKE 98
GATase1_PfpI_like cd03134
A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus ...
43-96 3.10e-03

A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus; A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704.


Pssm-ID: 153228 [Multi-domain]  Cd Length: 165  Bit Score: 37.14  E-value: 3.10e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 15595728  43 DSFDLLVVMGG--P--MSVHDEAQypwlvaekRLIRAALDAGKKVLGICLGAQLLAQA 96
Cdd:cd03134  61 DDYDALVIPGGtnPdkLRRDPDAV--------AFVRAFAEAGKPVAAICHGPWVLISA 110
hisH PRK13141
imidazole glycerol phosphate synthase subunit HisH; Provisional
73-93 3.60e-03

imidazole glycerol phosphate synthase subunit HisH; Provisional


Pssm-ID: 237288 [Multi-domain]  Cd Length: 205  Bit Score: 37.42  E-value: 3.60e-03
                         10        20
                 ....*....|....*....|.
gi 15595728   73 IRAALDAGKKVLGICLGAQLL 93
Cdd:PRK13141  65 IKEAVASGKPLLGICLGMQLL 85
hisH PRK13181
imidazole glycerol phosphate synthase subunit HisH; Provisional
73-131 7.12e-03

imidazole glycerol phosphate synthase subunit HisH; Provisional


Pssm-ID: 183878 [Multi-domain]  Cd Length: 199  Bit Score: 36.38  E-value: 7.12e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15595728   73 IRAALDAGKKVLGICLGAQLLA--------QALG---AAVR-----PGRQAEIGWWPLHrysQALGSPLGERLPE 131
Cdd:PRK13181  65 LKEHVEKKQPVLGICLGMQLLFesseegnvKGLGlipGDVKrfrsePLKVPQMGWNSVK---PLKESPLFKGIEE 136
GATase1_IGP_Synthase cd01748
Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate ...
70-94 9.14e-03

Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS); Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS). IGPS incorporates ammonia derived from glutamine into N1-[(5'-phosphoribulosyl)-formimino]-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to form 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR) and imidazole glycerol phosphate (IGP). The glutamine amidotransferase domain generates the ammonia nucleophile which is channeled from the glutaminase active site to the PRFAR active site. IGPS belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site.


Pssm-ID: 153219 [Multi-domain]  Cd Length: 198  Bit Score: 35.94  E-value: 9.14e-03
                        10        20
                ....*....|....*....|....*
gi 15595728  70 KRLIRAALDAGKKVLGICLGAQLLA 94
Cdd:cd01748  61 IEALKEAIASGKPFLGICLGMQLLF 85
GATase1_CobQ cd01750
Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ); Type ...
40-97 9.62e-03

Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ); Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ). CobQ plays a role in cobalamin biosythesis. CobQ catalyses amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide in the biosynthesis of cobalamin. CobQ belongs to the triad family of amidotransferases. Two of the three residues of the catalytic triad that are involved in glutamine binding, hydrolysis and transfer of the resulting ammonia to the acceptor substrate in other triad aminodotransferases are conserved in CobQ.


Pssm-ID: 153221 [Multi-domain]  Cd Length: 194  Bit Score: 36.07  E-value: 9.62e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 15595728  40 PALDSFDLLVVMGGPMSVHDEAqypWLVAE--KRLIRAALDAGKKVLGICLGAQLLAQAL 97
Cdd:cd01750  33 EGLGDADLIILPGSKDTIQDLA---WLRKRglAEAIKNYARAGGPVLGICGGYQMLGKYI 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH