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Conserved domains on  [gi|15596405|ref|NP_249899|]
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hypothetical protein PA1208 [Pseudomonas aeruginosa PAO1]

Protein Classification

flavin-containing monooxygenase( domain architecture ID 11449697)

flavin-containing monooxygenase (FMO) catalyses the flavin-dependent oxidation of ketones and cyclic ketones to esters and lactones, by using molecular oxygen and NAD(P)H.

CATH:  3.50.50.60
Gene Ontology:  GO:0016709|GO:0004497|GO:0050660
PubMed:  20015679|33588053

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
1-444 3.69e-135

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


:

Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 396.93  E-value: 3.69e-135
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405   1 MPVEHLDVLIVGAGLSGVGAAYHLMKHCPgkSFALLEGRAAMGGTWDLFRYPGIRSDSDMFTLGYNFKP-WSDPKAIADG 79
Cdd:COG2072   2 AATEHVDVVVIGAGQAGLAAAYHLRRAGI--DFVVLEKADDVGGTWRDNRYPGLRLDTPSHLYSLPFFPnWSDDPDFPTG 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405  80 PSIRRYIEETARENGIDRKIRYRHRVLRADWDSANARWNLDVQRGDepeplRMTAQFLLMCTGYYRyeAGYTPEFVGRED 159
Cdd:COG2072  80 DEILAYLEAYADKFGLRRPIRFGTEVTSARWDEADGRWTVTTDDGE-----TLTARFVVVATGPLS--RPKIPDIPGLED 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405 160 FAGQVVHPQLWPEDLDYSGKKVVVIGSGATAVTLVPSLTDKAAHVTMLQRSPSYVITlpqkdaisnflRRFLPETWiyrq 239
Cdd:COG2072 153 FAGEQLHSADWRNPVDLAGKRVLVVGTGASAVQIAPELARVAAHVTVFQRTPPWVLP-----------RPNYDPER---- 217
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405 240 ARARNVAMQMVFFMLARTFpglVRKALLKLASLQLgKRFDIRHFSPRYKPWDERVCAvpDGDLFKVLRKGKASVVTEHID 319
Cdd:COG2072 218 GRPANYLGLEAPPALNRRD---ARAWLRRLLRAQV-KDPELGLLTPDYPPGCKRPLL--STDYYEALRRGNVELVTGGIE 291
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405 320 RFVERGIRLKTGEVLEADIIVTATGLDLVMFGGAELAVDGkPFLVNQSMGYRGIMLRDLPNLaAVVGYTN----ASWTLK 395
Cdd:COG2072 292 RITEDGVVFADGTEHEVDVIVWATGFRADLPWLAPLDVRG-RDGRSGPRAYLGVVVPGFPNL-FFLGPNSpsghSSLTLG 369
                       410       420       430       440
                ....*....|....*....|....*....|....*....|....*....
gi 15596405 396 ADLSSEYFCRLINHMDATGMRQVtardstgDVREEPFLNLDSGYIQRAA 444
Cdd:COG2072 370 AERQARYIARLIAHMRRRGAAAI-------EVRPEAEDAFNARLQRRAA 411
 
Name Accession Description Interval E-value
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
1-444 3.69e-135

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 396.93  E-value: 3.69e-135
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405   1 MPVEHLDVLIVGAGLSGVGAAYHLMKHCPgkSFALLEGRAAMGGTWDLFRYPGIRSDSDMFTLGYNFKP-WSDPKAIADG 79
Cdd:COG2072   2 AATEHVDVVVIGAGQAGLAAAYHLRRAGI--DFVVLEKADDVGGTWRDNRYPGLRLDTPSHLYSLPFFPnWSDDPDFPTG 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405  80 PSIRRYIEETARENGIDRKIRYRHRVLRADWDSANARWNLDVQRGDepeplRMTAQFLLMCTGYYRyeAGYTPEFVGRED 159
Cdd:COG2072  80 DEILAYLEAYADKFGLRRPIRFGTEVTSARWDEADGRWTVTTDDGE-----TLTARFVVVATGPLS--RPKIPDIPGLED 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405 160 FAGQVVHPQLWPEDLDYSGKKVVVIGSGATAVTLVPSLTDKAAHVTMLQRSPSYVITlpqkdaisnflRRFLPETWiyrq 239
Cdd:COG2072 153 FAGEQLHSADWRNPVDLAGKRVLVVGTGASAVQIAPELARVAAHVTVFQRTPPWVLP-----------RPNYDPER---- 217
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405 240 ARARNVAMQMVFFMLARTFpglVRKALLKLASLQLgKRFDIRHFSPRYKPWDERVCAvpDGDLFKVLRKGKASVVTEHID 319
Cdd:COG2072 218 GRPANYLGLEAPPALNRRD---ARAWLRRLLRAQV-KDPELGLLTPDYPPGCKRPLL--STDYYEALRRGNVELVTGGIE 291
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405 320 RFVERGIRLKTGEVLEADIIVTATGLDLVMFGGAELAVDGkPFLVNQSMGYRGIMLRDLPNLaAVVGYTN----ASWTLK 395
Cdd:COG2072 292 RITEDGVVFADGTEHEVDVIVWATGFRADLPWLAPLDVRG-RDGRSGPRAYLGVVVPGFPNL-FFLGPNSpsghSSLTLG 369
                       410       420       430       440
                ....*....|....*....|....*....|....*....|....*....
gi 15596405 396 ADLSSEYFCRLINHMDATGMRQVtardstgDVREEPFLNLDSGYIQRAA 444
Cdd:COG2072 370 AERQARYIARLIAHMRRRGAAAI-------EVRPEAEDAFNARLQRRAA 411
FMO-like pfam00743
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ...
85-239 6.91e-07

Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.


Pssm-ID: 395602 [Multi-domain]  Cd Length: 531  Bit Score: 51.70  E-value: 6.91e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405    85 YIEETARENGIDRKIRYRHRVL----RADWdSANARWNLDVQRGDEPEplrmTAQF--LLMCTGYYRYEAGYTPEFVGRE 158
Cdd:pfam00743  89 YFRMFAKEFDLLKYIQFKTTVCsvkkRPDF-STSGQWEVVTEHEGKQE----SAVFdaVMVCTGHHTNPHLPLESFPGIE 163
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405   159 DFAGQVVHPQLWPEDLDYSGKKVVVIGSGATAVTLVPSLTDKAAHVTMLQRSPSYVITLPQKDA----------ISNFLR 228
Cdd:pfam00743 164 KFKGQYFHSRDYKHPEGFTGKRVLVIGIGNSGGDIAVELSHTAAQVFLSTRRGSWVLSRVSDHGypwdmlfstrFTSFLR 243
                         170
                  ....*....|....
gi 15596405   229 RFLPET---WIYRQ 239
Cdd:pfam00743 244 NILPTSisnWLMEK 257
PRK06854 PRK06854
adenylyl-sulfate reductase subunit alpha;
7-42 4.67e-03

adenylyl-sulfate reductase subunit alpha;


Pssm-ID: 235879 [Multi-domain]  Cd Length: 608  Bit Score: 39.52  E-value: 4.67e-03
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 15596405    7 DVLIVGAGLSGVGAAYHLMKHCPGKSFALLEgRAAM 42
Cdd:PRK06854  13 DILIIGGGMAGCGAAFEAKEWAPDLKVLIVE-KANI 47
soxA_mon TIGR01377
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ...
7-37 7.22e-03

sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]


Pssm-ID: 130444 [Multi-domain]  Cd Length: 380  Bit Score: 38.66  E-value: 7.22e-03
                          10        20        30
                  ....*....|....*....|....*....|.
gi 15596405     7 DVLIVGAGLSGVGAAYHLMKHcpGKSFALLE 37
Cdd:TIGR01377   2 DVIVVGAGIMGCFAAYHLAKH--GKKTLLLE 30
 
Name Accession Description Interval E-value
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
1-444 3.69e-135

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 396.93  E-value: 3.69e-135
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405   1 MPVEHLDVLIVGAGLSGVGAAYHLMKHCPgkSFALLEGRAAMGGTWDLFRYPGIRSDSDMFTLGYNFKP-WSDPKAIADG 79
Cdd:COG2072   2 AATEHVDVVVIGAGQAGLAAAYHLRRAGI--DFVVLEKADDVGGTWRDNRYPGLRLDTPSHLYSLPFFPnWSDDPDFPTG 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405  80 PSIRRYIEETARENGIDRKIRYRHRVLRADWDSANARWNLDVQRGDepeplRMTAQFLLMCTGYYRyeAGYTPEFVGRED 159
Cdd:COG2072  80 DEILAYLEAYADKFGLRRPIRFGTEVTSARWDEADGRWTVTTDDGE-----TLTARFVVVATGPLS--RPKIPDIPGLED 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405 160 FAGQVVHPQLWPEDLDYSGKKVVVIGSGATAVTLVPSLTDKAAHVTMLQRSPSYVITlpqkdaisnflRRFLPETWiyrq 239
Cdd:COG2072 153 FAGEQLHSADWRNPVDLAGKRVLVVGTGASAVQIAPELARVAAHVTVFQRTPPWVLP-----------RPNYDPER---- 217
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405 240 ARARNVAMQMVFFMLARTFpglVRKALLKLASLQLgKRFDIRHFSPRYKPWDERVCAvpDGDLFKVLRKGKASVVTEHID 319
Cdd:COG2072 218 GRPANYLGLEAPPALNRRD---ARAWLRRLLRAQV-KDPELGLLTPDYPPGCKRPLL--STDYYEALRRGNVELVTGGIE 291
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405 320 RFVERGIRLKTGEVLEADIIVTATGLDLVMFGGAELAVDGkPFLVNQSMGYRGIMLRDLPNLaAVVGYTN----ASWTLK 395
Cdd:COG2072 292 RITEDGVVFADGTEHEVDVIVWATGFRADLPWLAPLDVRG-RDGRSGPRAYLGVVVPGFPNL-FFLGPNSpsghSSLTLG 369
                       410       420       430       440
                ....*....|....*....|....*....|....*....|....*....
gi 15596405 396 ADLSSEYFCRLINHMDATGMRQVtardstgDVREEPFLNLDSGYIQRAA 444
Cdd:COG2072 370 AERQARYIARLIAHMRRRGAAAI-------EVRPEAEDAFNARLQRRAA 411
FMO-like pfam00743
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ...
85-239 6.91e-07

Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.


Pssm-ID: 395602 [Multi-domain]  Cd Length: 531  Bit Score: 51.70  E-value: 6.91e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405    85 YIEETARENGIDRKIRYRHRVL----RADWdSANARWNLDVQRGDEPEplrmTAQF--LLMCTGYYRYEAGYTPEFVGRE 158
Cdd:pfam00743  89 YFRMFAKEFDLLKYIQFKTTVCsvkkRPDF-STSGQWEVVTEHEGKQE----SAVFdaVMVCTGHHTNPHLPLESFPGIE 163
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405   159 DFAGQVVHPQLWPEDLDYSGKKVVVIGSGATAVTLVPSLTDKAAHVTMLQRSPSYVITLPQKDA----------ISNFLR 228
Cdd:pfam00743 164 KFKGQYFHSRDYKHPEGFTGKRVLVIGIGNSGGDIAVELSHTAAQVFLSTRRGSWVLSRVSDHGypwdmlfstrFTSFLR 243
                         170
                  ....*....|....
gi 15596405   229 RFLPET---WIYRQ 239
Cdd:pfam00743 244 NILPTSisnWLMEK 257
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
7-231 2.65e-06

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 49.24  E-value: 2.65e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405     7 DVLIVGAGLSGVGAAYHLMKHcpGKSFALLEgraaMGGTWDLFR---YPGIRSDSDmftlgynfkpwsDPKAIADGPSIR 83
Cdd:pfam07992   2 DVVVIGGGPAGLAAALTLAQL--GGKVTLIE----DEGTCPYGGcvlSKALLGAAE------------APEIASLWADLY 63
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405    84 RYIEETARENGIDRKIRYRHRVLRADWDSAnarwNLDVQRGDEPEPLRMTAQFLLMCTGyyryEAGYTPEFVGREDFAGQ 163
Cdd:pfam07992  64 KRKEEVVKKLNNGIEVLLGTEVVSIDPGAK----KVVLEELVDGDGETITYDRLVIATG----ARPRLPPIPGVELNVGF 135
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15596405   164 VVHPqlwPED-----LDYSGKKVVVIGSGATAVTLVPSLTDKAAHVTMLQRSPSYVITLPQKdaISNFLRRFL 231
Cdd:pfam07992 136 LVRT---LDSaealrLKLLPKRVVVVGGGYIGVELAAALAKLGKEVTLIEALDRLLRAFDEE--ISAALEKAL 203
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
7-209 4.85e-06

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 48.19  E-value: 4.85e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405   7 DVLIVGAGLSGVGAAYHLMKHcpGKSFALLEGRAAmGG----TWDLFRYPGIrsdsdmftlgynfkpwsdPKAIaDGPSI 82
Cdd:COG0492   2 DVVIIGAGPAGLTAAIYAARA--GLKTLVIEGGEP-GGqlatTKEIENYPGF------------------PEGI-SGPEL 59
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405  83 RRYIEETARENGIDrkIRYRHrVLRADwdSANARWNLDVQRGDEpeplrMTAQFLLMCTGyyryeAGY-TPEFVGREDFA 161
Cdd:COG0492  60 AERLREQAERFGAE--ILLEE-VTSVD--KDDGPFRVTTDDGTE-----YEAKAVIIATG-----AGPrKLGLPGEEEFE 124
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|..
gi 15596405 162 GQVVH----PQLWpedlDYSGKKVVVIGSGATAVTLVPSLTDKAAHVTMLQR 209
Cdd:COG0492 125 GRGVSycatCDGF----FFRGKDVVVVGGGDSALEEALYLTKFASKVTLIHR 172
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
2-44 1.22e-05

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 47.61  E-value: 1.22e-05
                        10        20        30        40
                ....*....|....*....|....*....|....*....|...
gi 15596405   2 PVEHLDVLIVGAGLSGVGAAYHLMKHcpGKSFALLEGRAAMGG 44
Cdd:COG1231   4 RARGKDVVIVGAGLAGLAAARELRKA--GLDVTVLEARDRVGG 44
YdhS COG4529
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
1-346 1.84e-05

Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];


Pssm-ID: 443597 [Multi-domain]  Cd Length: 466  Bit Score: 47.26  E-value: 1.84e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405   1 MPVEHLDVLIVGAGLSGVGAAYHLMKHCPGK-SFALLEGRAAMGgtwdlfryPGI--RSDSD----------MFTLG--- 64
Cdd:COG4529   1 MTGARKRIAIIGGGASGTALAIHLLRRAPEPlRITLFEPRPELG--------RGVaySTDSPehllnvpagrMSAFPddp 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405  65 ------YNFKPWSDPKAIADGPSIRR-----YIEETARE-----NGIDRKIRYRHRVLraDWDSANARWNLDVQRGdepE 128
Cdd:COG4529  73 dhflrwLRENGARAAPAIDPDAFVPRrlfgeYLRERLAEalaraPAGVRLRHIRAEVV--DLERDDGGYRVTLADG---E 147
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405 129 PLRmtAQFLLMCTGYYRYEAGYTPEFVGRedfaGQVVHPqlWPED-LD--YSGKKVVVIGSGATAVTLVPSLTDK--AAH 203
Cdd:COG4529 148 TLR--ADAVVLATGHPPPAPPPGLAAGSP----RYIADP--WPPGaLAriPPDARVLIIGTGLTAIDVVLSLAARghRGP 219
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405 204 VTMLQRS-------------PSYVITlpqKDAISNFLRRFLPET------WI---YRQARARNVAMQMVFFMLARTFPGL 261
Cdd:COG4529 220 ITALSRRgllprahppgaplPLKFLT---PEALEELPLFFAARTardllrALradLAEAEAGGVDWRAVIDALRPVLQAL 296
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405 262 VRKalLKLASLQlgkRFdIRHFSPRykpWDE-RVCAVP-----------DGDLfkVLRKGKASVVTEHIDRFVERGIRlk 329
Cdd:COG4529 297 WAA--LSAEERR---RF-LRHLRPY---WDVhRHRMPPesaarllaliaAGRL--EVLAGRLEDIEAAEGGFVVTGAG-- 363
                       410
                ....*....|....*..
gi 15596405 330 TGEVLEADIIVTATGLD 346
Cdd:COG4529 364 DGETLEVDVVINATGPE 380
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
10-55 2.54e-05

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 42.13  E-value: 2.54e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 15596405    10 IVGAGLSGVGAAYHLMKHcpGKSFALLEGRAAMGGTWDLFRYPGIR 55
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKR--GFRVLVLEKRDRLGGNAYSYRVPGYV 44
Pyr_redox_3 pfam13738
Pyridine nucleotide-disulphide oxidoreductase;
17-251 7.91e-05

Pyridine nucleotide-disulphide oxidoreductase;


Pssm-ID: 404603 [Multi-domain]  Cd Length: 296  Bit Score: 44.52  E-value: 7.91e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405    17 GVGAAYHLmKHCPGKSFALLEgRAAMGGTWdlFRYPgirsdSDM--FTLGYNFKPWSDP--KAIADGPSIRRYIEETARE 92
Cdd:pfam13738   3 GIGCAIAL-KKAGLEDYLILE-KGNIGNSF--YRYP-----THMtfFSPSFTSNGFGIPdlNAISPGTSPAFTFNREHPS 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405    93 NgiDRKIRYRHRVLRadwdsanaRWNLDVQrgdEPEPLR-----------------MTAQFLLMCTGYYRYEagYTPefv 155
Cdd:pfam13738  74 G--NEYAEYLRRVAD--------HFELPIN---LFEEVTsvkkeddgfvvttskgtYQARYVIIATGEFDFP--NKL--- 135
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405   156 greDFAGQVVHPQLWPEDLDYSGKKVVVIGSGATAVTLVPSLTDKAAHVTMLQRSPsyvitlPQKDAISNFLRRFLPETW 235
Cdd:pfam13738 136 ---GVPELPKHYSYVKDFHPYAGQKVVVIGGYNSAVDAALELVRKGARVTVLYRGS------EWEDRDSDPSYSLSPDTL 206
                         250
                  ....*....|....*.
gi 15596405   236 IYRQARARNVAMQMVF 251
Cdd:pfam13738 207 NRLEELVKNGKIKAHF 222
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
7-46 1.16e-04

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 44.51  E-value: 1.16e-04
                        10        20        30        40
                ....*....|....*....|....*....|....*....|.
gi 15596405   7 DVLIVGAGLSGVGAAYHLMKHcpGKSFALLE-GRAAMGGTW 46
Cdd:COG0665   4 DVVVIGGGIAGLSTAYHLARR--GLDVTVLErGRPGSGASG 42
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
5-44 2.68e-04

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 43.28  E-value: 2.68e-04
                        10        20        30        40
                ....*....|....*....|....*....|....*....|
gi 15596405   5 HLDVLIVGAGLSGVGAAYHLMKHcpGKSFALLEGRAAMGG 44
Cdd:COG1232   1 MKRVAVIGGGIAGLTAAYRLAKA--GHEVTVLEASDRVGG 38
Thi4 pfam01946
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
7-61 1.39e-03

Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.


Pssm-ID: 460393  Cd Length: 232  Bit Score: 40.15  E-value: 1.39e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 15596405     7 DVLIVGAGLSGVGAAYHLMKHcPGKSFALLEGRAAM-GGTW---DLFRYPGIRSDSDMF 61
Cdd:pfam01946  19 DVVIVGAGSSGLTAAYYLAKN-RGLKVAIIERSVSPgGGAWlggQLFSAMVVRKPAHLF 76
NAD_binding_7 pfam13241
Putative NAD(P)-binding; This domain is found in fungi, plants, archaea and bacteria.
174-245 2.08e-03

Putative NAD(P)-binding; This domain is found in fungi, plants, archaea and bacteria.


Pssm-ID: 433055 [Multi-domain]  Cd Length: 104  Bit Score: 37.84  E-value: 2.08e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405   174 LDYSGKKVVVIGSGATAVTLVPSLTDKAAHVTMLqrSPSyvITLPQKDAISnFLRRFLPE------------------TW 235
Cdd:pfam13241   3 LDLRGKRVLVVGGGEVAARKARKLLEAGAKVTVV--SPE--ITPFLEGLLD-LIRREFEGdldgadlviaatddpelnER 77
                          90
                  ....*....|
gi 15596405   236 IYRQARARNV 245
Cdd:pfam13241  78 IAALARARGI 87
COG3573 COG3573
Predicted oxidoreductase [General function prediction only];
1-44 2.52e-03

Predicted oxidoreductase [General function prediction only];


Pssm-ID: 442794 [Multi-domain]  Cd Length: 551  Bit Score: 40.55  E-value: 2.52e-03
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*.
gi 15596405   1 MPVEHLDVLIVGAGLSGVGAAYHLMKHcpGKSFALL--EGRAAMGG 44
Cdd:COG3573   1 MAAMDADVIVVGAGLAGLVAAAELADA--GRRVLLLdqEPEANLGG 44
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
7-126 2.67e-03

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 40.07  E-value: 2.67e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405     7 DVLIVGAGLSGVGAAYHLMKHcpGKSFALLE--GRAAMGGTWdlfrypgiRSdSDMFTLGYNFKPWSDPKAIADgpSIRR 84
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYELARR--GLSVTLLErgDDPGSGASG--------RN-AGLIHPGLRYLEPSELARLAL--EALD 67
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 15596405    85 YIEETARENGIDrkIRYRHR-VLRADWDSANARWNLDVQRGDE 126
Cdd:pfam01266  68 LWEELEEELGID--CGFRRCgVLVLARDEEEEALEKLLAALRR 108
PRK06854 PRK06854
adenylyl-sulfate reductase subunit alpha;
7-42 4.67e-03

adenylyl-sulfate reductase subunit alpha;


Pssm-ID: 235879 [Multi-domain]  Cd Length: 608  Bit Score: 39.52  E-value: 4.67e-03
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 15596405    7 DVLIVGAGLSGVGAAYHLMKHCPGKSFALLEgRAAM 42
Cdd:PRK06854  13 DILIIGGGMAGCGAAFEAKEWAPDLKVLIVE-KANI 47
PRK12771 PRK12771
putative glutamate synthase (NADPH) small subunit; Provisional
8-191 5.32e-03

putative glutamate synthase (NADPH) small subunit; Provisional


Pssm-ID: 237198 [Multi-domain]  Cd Length: 564  Bit Score: 39.47  E-value: 5.32e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405    8 VLIVGAGLSGVGAAYHL--MKHcpgkSFALLEGRAAMGGtwdLFRYpGIrsdsdmftLGYNFkpwsdPKAIADGpSIRRy 85
Cdd:PRK12771 140 VAVIGGGPAGLSAAYHLrrMGH----AVTIFEAGPKLGG---MMRY-GI--------PAYRL-----PREVLDA-EIQR- 196
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15596405   86 IEETarenGIdrKIRYRHRV--------LRADWDS------ANARWNLDVQrGDEPEPLrMTA-QFLlmctgyyryeagy 150
Cdd:PRK12771 197 ILDL----GV--EVRLGVRVgeditleqLEGEFDAvfvaigAQLGKRLPIP-GEDAAGV-LDAvDFL------------- 255
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 15596405  151 tpefvgrEDFAGqvvhpqlwpEDLDYSGKKVVVIGSGATAV 191
Cdd:PRK12771 256 -------RAVGE---------GEPPFLGKRVVVIGGGNTAM 280
soxA_mon TIGR01377
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ...
7-37 7.22e-03

sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]


Pssm-ID: 130444 [Multi-domain]  Cd Length: 380  Bit Score: 38.66  E-value: 7.22e-03
                          10        20        30
                  ....*....|....*....|....*....|.
gi 15596405     7 DVLIVGAGLSGVGAAYHLMKHcpGKSFALLE 37
Cdd:TIGR01377   2 DVIVVGAGIMGCFAAYHLAKH--GKKTLLLE 30
PRK12834 PRK12834
putative FAD-binding dehydrogenase; Reviewed
7-44 9.09e-03

putative FAD-binding dehydrogenase; Reviewed


Pssm-ID: 183782 [Multi-domain]  Cd Length: 549  Bit Score: 38.73  E-value: 9.09e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 15596405    7 DVLIVGAGLSGVGAAYHLMKHcpGKSFALL--EGRAAMGG 44
Cdd:PRK12834   6 DVIVVGAGLAGLVAAAELADA--GKRVLLLdqENEANLGG 43
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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