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Conserved domains on  [gi|15597369|ref|NP_250863|]
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hypothetical protein PA2173 [Pseudomonas aeruginosa PAO1]

Protein Classification

DUF2892 domain-containing protein( domain architecture ID 10567512)

DUF2892 domain-containing protein, similar to Bacillus subtilis membrane protein YezF

SCOP:  4004795

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2892 pfam11127
Protein of unknown function (DUF2892); This family is conserved in bacteria. The function is ...
 13-69 4.63e-04

Protein of unknown function (DUF2892); This family is conserved in bacteria. The function is not known.


:

Pssm-ID: 463227  Cd Length: 66  Bit Score: 35.70  E-value: 4.63e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 15597369    13 LPHNLQRGERLASIGAGLVLAGFGLAR-GGLPGACKAVAGGLLVSRGLSGHCHVKGLL 69
Cdd:pfam11127   1 MKKNVGTLDRLLRIIVGLVLLALALLGlLGGWGWLLGLVGAVLLLTGLTGFCPLYALL 58
 
Name Accession Description Interval E-value
DUF2892 pfam11127
Protein of unknown function (DUF2892); This family is conserved in bacteria. The function is ...
 13-69 4.63e-04

Protein of unknown function (DUF2892); This family is conserved in bacteria. The function is not known.


Pssm-ID: 463227  Cd Length: 66  Bit Score: 35.70  E-value: 4.63e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 15597369    13 LPHNLQRGERLASIGAGLVLAGFGLAR-GGLPGACKAVAGGLLVSRGLSGHCHVKGLL 69
Cdd:pfam11127   1 MKKNVGTLDRLLRIIVGLVLLALALLGlLGGWGWLLGLVGAVLLLTGLTGFCPLYALL 58
 
Name Accession Description Interval E-value
DUF2892 pfam11127
Protein of unknown function (DUF2892); This family is conserved in bacteria. The function is ...
 13-69 4.63e-04

Protein of unknown function (DUF2892); This family is conserved in bacteria. The function is not known.


Pssm-ID: 463227  Cd Length: 66  Bit Score: 35.70  E-value: 4.63e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 15597369    13 LPHNLQRGERLASIGAGLVLAGFGLAR-GGLPGACKAVAGGLLVSRGLSGHCHVKGLL 69
Cdd:pfam11127   1 MKKNVGTLDRLLRIIVGLVLLALALLGlLGGWGWLLGLVGAVLLLTGLTGFCPLYALL 58
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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