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Conserved domains on  [gi|15830418|ref|NP_309191|]
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hypothetical protein ECs_1164 [Escherichia coli O157:H7 str. Sakai]

Protein Classification

DUF551 domain-containing protein( domain architecture ID 10517173)

DUF551 domain-containing protein similar to Escherichia coli Eaa protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF551 pfam04448
Protein of unknown function (DUF551); This family represents the carboxy terminus of a protein ...
 135-202 1.70e-23

Protein of unknown function (DUF551); This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.


:

Pssm-ID: 427954  Cd Length: 66  Bit Score: 88.61  E-value: 1.70e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15830418   135 SWISCSDRMPEKGQNVLIsvnFDSSLVEPLICSARYTGSTFRRGD-ATIKPGNGIEQATHWMPLPEPPQ 202
Cdd:pfam04448   1 GWISCSERMPEPGIPVLV---FDSQGQWVGIEGGKVYGATFNGDGwDEYSEGPDLHEVTHWMPLPEPPQ 66
 
Name Accession Description Interval E-value
DUF551 pfam04448
Protein of unknown function (DUF551); This family represents the carboxy terminus of a protein ...
 135-202 1.70e-23

Protein of unknown function (DUF551); This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.


Pssm-ID: 427954  Cd Length: 66  Bit Score: 88.61  E-value: 1.70e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15830418   135 SWISCSDRMPEKGQNVLIsvnFDSSLVEPLICSARYTGSTFRRGD-ATIKPGNGIEQATHWMPLPEPPQ 202
Cdd:pfam04448   1 GWISCSERMPEPGIPVLV---FDSQGQWVGIEGGKVYGATFNGDGwDEYSEGPDLHEVTHWMPLPEPPQ 66
 
Name Accession Description Interval E-value
DUF551 pfam04448
Protein of unknown function (DUF551); This family represents the carboxy terminus of a protein ...
 135-202 1.70e-23

Protein of unknown function (DUF551); This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.


Pssm-ID: 427954  Cd Length: 66  Bit Score: 88.61  E-value: 1.70e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15830418   135 SWISCSDRMPEKGQNVLIsvnFDSSLVEPLICSARYTGSTFRRGD-ATIKPGNGIEQATHWMPLPEPPQ 202
Cdd:pfam04448   1 GWISCSERMPEPGIPVLV---FDSQGQWVGIEGGKVYGATFNGDGwDEYSEGPDLHEVTHWMPLPEPPQ 66
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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