T3SS structure protein EscF [Escherichia coli O157:H7 str. Sakai]
Protein Classification
EscF/YscF/HrpA family type III secretion system needle major subunit( domain architecture ID 10020244)
EscF/YscF/HrpA family type III secretion system needle major subunit is a major component of the type III secretion needle structure
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| III_needle | TIGR02105 | type III secretion apparatus needle protein; Type III secretion systems translocate proteins, ... |
1-72 | 1.30e-27 | ||
type III secretion apparatus needle protein; Type III secretion systems translocate proteins, usually virulence factors, out across both inner and outer membranes of certain Gram-negative bacteria and further across the plasma membrane and into the cytoplasm of the host cell. This protein, termed YscF in Yersinia, and EscF, PscF, EprI, etc. in other systems, forms the needle of the injection apparatus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis] : Pssm-ID: 131160 Cd Length: 72 Bit Score: 94.42 E-value: 1.30e-27
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| Name | Accession | Description | Interval | E-value | ||
| III_needle | TIGR02105 | type III secretion apparatus needle protein; Type III secretion systems translocate proteins, ... |
1-72 | 1.30e-27 | ||
type III secretion apparatus needle protein; Type III secretion systems translocate proteins, usually virulence factors, out across both inner and outer membranes of certain Gram-negative bacteria and further across the plasma membrane and into the cytoplasm of the host cell. This protein, termed YscF in Yersinia, and EscF, PscF, EprI, etc. in other systems, forms the needle of the injection apparatus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis] Pssm-ID: 131160 Cd Length: 72 Bit Score: 94.42 E-value: 1.30e-27
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| PRK15344 | PRK15344 | type III secretion system needle protein SsaG; Provisional |
1-68 | 9.55e-12 | ||
type III secretion system needle protein SsaG; Provisional Pssm-ID: 185242 Cd Length: 71 Bit Score: 54.19 E-value: 9.55e-12
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| T3SS_needle_F | pfam09392 | Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF; Type III secretion systems are ... |
6-68 | 4.21e-09 | ||
Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF; Type III secretion systems are essential virulence determinants for many gram-negative bacterial pathogens. MxiH is an extracellular alpha helical needle that is required for translocation of effector proteins into host cells. Once inside, the effector proteins subvert normal cell function to aid infection. The needle protein F, polymerizes to form a shaft. Pssm-ID: 430579 Cd Length: 67 Bit Score: 47.28 E-value: 4.21e-09
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| T3SS_SctI | NF038054 | type III secretion system inner rod subunit SctI; This model describes protein SctI (Secretion ... |
23-52 | 8.47e-03 | ||
type III secretion system inner rod subunit SctI; This model describes protein SctI (Secretion and Cellular Translocation I), an inner rod protein in the basal body of the type III secretion system (T3SS) as found in many pathogenic bacteria. SctI has some sequence similarity to the needle filament protein SctF. Lineage-specific names for SctI in various bacteria include BsaK, PrgJ, and MxiI. Pssm-ID: 411646 Cd Length: 76 Bit Score: 31.43 E-value: 8.47e-03
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| Name | Accession | Description | Interval | E-value | ||
| III_needle | TIGR02105 | type III secretion apparatus needle protein; Type III secretion systems translocate proteins, ... |
1-72 | 1.30e-27 | ||
type III secretion apparatus needle protein; Type III secretion systems translocate proteins, usually virulence factors, out across both inner and outer membranes of certain Gram-negative bacteria and further across the plasma membrane and into the cytoplasm of the host cell. This protein, termed YscF in Yersinia, and EscF, PscF, EprI, etc. in other systems, forms the needle of the injection apparatus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis] Pssm-ID: 131160 Cd Length: 72 Bit Score: 94.42 E-value: 1.30e-27
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| PRK15344 | PRK15344 | type III secretion system needle protein SsaG; Provisional |
1-68 | 9.55e-12 | ||
type III secretion system needle protein SsaG; Provisional Pssm-ID: 185242 Cd Length: 71 Bit Score: 54.19 E-value: 9.55e-12
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| T3SS_needle_F | pfam09392 | Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF; Type III secretion systems are ... |
6-68 | 4.21e-09 | ||
Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF; Type III secretion systems are essential virulence determinants for many gram-negative bacterial pathogens. MxiH is an extracellular alpha helical needle that is required for translocation of effector proteins into host cells. Once inside, the effector proteins subvert normal cell function to aid infection. The needle protein F, polymerizes to form a shaft. Pssm-ID: 430579 Cd Length: 67 Bit Score: 47.28 E-value: 4.21e-09
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| T3SS_SctI | NF038054 | type III secretion system inner rod subunit SctI; This model describes protein SctI (Secretion ... |
23-52 | 8.47e-03 | ||
type III secretion system inner rod subunit SctI; This model describes protein SctI (Secretion and Cellular Translocation I), an inner rod protein in the basal body of the type III secretion system (T3SS) as found in many pathogenic bacteria. SctI has some sequence similarity to the needle filament protein SctF. Lineage-specific names for SctI in various bacteria include BsaK, PrgJ, and MxiI. Pssm-ID: 411646 Cd Length: 76 Bit Score: 31.43 E-value: 8.47e-03
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