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Conserved domains on  [gi|16080593|ref|NP_391420|]
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flagellar hook-filament junction protein [Bacillus subtilis subsp. subtilis str. 168]

Protein Classification

flagellar hook-associated protein FlgL( domain architecture ID 11482852)

flagellar hook-associated protein FlgL, together with FlgK, forms the junction between the hook and the filament in the flagellum and provides a structural base where flagellin, a filament-forming protein, is inserted for the initiation of filament elongation; similar to Escherichia coli FlgL (also known as HAP3)

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
flgL PRK07701
flagellar hook-associated protein FlgL; Validated
 1-298 1.00e-162

flagellar hook-associated protein FlgL; Validated


:

Pssm-ID: 181087 [Multi-domain]  Cd Length: 298  Bit Score: 454.07  E-value: 1.00e-162
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593    1 MRVTQGMIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNI 80
Cdd:PRK07701   1 MRVTQNMLANNFLRNINSNLEKLDKYQEQLSTGKKITRPSDDPVVAMKSLRYRTDLAEVEQYQKNASDAKSWLENTESAL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   81 TEGIDILSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIANTQVNGRYIFNGTNSDKPPVTDNGDGTYTISDTAD 160
Cdd:PRK07701  81 DQATDILQRARELAVQAANGTNTQTDRQAIAQEIEQLKEQLIQIANTQYNGRYIFNGTKTDTPPVTDDGDNIENSTDSGD 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  161 VVVNISNNMSLKVNSDPKSAFGGTSESGQNVFEMLDSFEKALNSGSLDGMDSVLNDIDHFSDGMSAERSDLGARYNRLEL 240
Cdd:PRK07701 161 IEFEIAKGNTINVNVPGDKAFGGQSGGGSNLFEMLDNLENALDSGDTQGVSNLLSDIDQHIDNVLAVRAELGARSNRLEL 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 16080593  241 VNTRLSAQEETATKVLSDNEDVELEEVITEFIAQQSVHRATLAVNAQIVQPTLIDFLK 298
Cdd:PRK07701 241 IENRLSDQEVNATKLLSDNEDVDLAEVITDLKTQENVYRAALAVGARIIQPSLVDFLR 298
 
Name Accession Description Interval E-value
flgL PRK07701
flagellar hook-associated protein FlgL; Validated
 1-298 1.00e-162

flagellar hook-associated protein FlgL; Validated


Pssm-ID: 181087 [Multi-domain]  Cd Length: 298  Bit Score: 454.07  E-value: 1.00e-162
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593    1 MRVTQGMIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNI 80
Cdd:PRK07701   1 MRVTQNMLANNFLRNINSNLEKLDKYQEQLSTGKKITRPSDDPVVAMKSLRYRTDLAEVEQYQKNASDAKSWLENTESAL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   81 TEGIDILSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIANTQVNGRYIFNGTNSDKPPVTDNGDGTYTISDTAD 160
Cdd:PRK07701  81 DQATDILQRARELAVQAANGTNTQTDRQAIAQEIEQLKEQLIQIANTQYNGRYIFNGTKTDTPPVTDDGDNIENSTDSGD 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  161 VVVNISNNMSLKVNSDPKSAFGGTSESGQNVFEMLDSFEKALNSGSLDGMDSVLNDIDHFSDGMSAERSDLGARYNRLEL 240
Cdd:PRK07701 161 IEFEIAKGNTINVNVPGDKAFGGQSGGGSNLFEMLDNLENALDSGDTQGVSNLLSDIDQHIDNVLAVRAELGARSNRLEL 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 16080593  241 VNTRLSAQEETATKVLSDNEDVELEEVITEFIAQQSVHRATLAVNAQIVQPTLIDFLK 298
Cdd:PRK07701 241 IENRLSDQEVNATKLLSDNEDVDLAEVITDLKTQENVYRAALAVGARIIQPSLVDFLR 298
flagell_flgL TIGR02550
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ...
 2-297 3.01e-96

flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274195 [Multi-domain]  Cd Length: 306  Bit Score: 286.17  E-value: 3.01e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593     2 RVTQGMIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNIT 81
Cdd:TIGR02550   1 RVSTNMLYNNSLNSITNNQSRLAKLQQQLSSGKRINKPSDDPVAAAQALNLNQELAQLEQYQKNIDDAKNWLSQTETALS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593    82 EGIDILSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIANTQ-VNGRYIFNGTNSDKPPVTDNGDGTYTI-SDTA 159
Cdd:TIGR02550  81 SVGDVLQRARELAVQAANGTLSDDDRKAIAKEIKQLLDQLVNLANTKdGNGRYIFSGTKTDTPPFSEDEGGEVTYnGDGG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   160 DVVVNISNNMSLKVNSDPKSAFGGTSESGQNVF-------EMLDSFEKALNSGS-LDGMDSVLNDIDHFSDGMSAERSDL 231
Cdd:TIGR02550 161 QRKVQVASNRSMPIGHPGDKVFMSIPNNDKSVFstgddliDALKKLEDALSSGDaKAALSASLNDLDKALDNVLSARAEV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16080593   232 GARYNRLELVNTRLSAQEETATKVLSDNEDVELEEVITEFIAQQSVHRATLAVNAQIVQPTLIDFL 297
Cdd:TIGR02550 241 GARLNRLENLNSRLSEQKLQLTEQLSDLEDVDLAEAISDLNMQQAALQAALKTFAKIQQLSLFDYL 306
FlgL COG1344
Flagellin and related hook-associated protein FlgL [Cell motility];
1-298 5.42e-67

Flagellin and related hook-associated protein FlgL [Cell motility];


Pssm-ID: 440955 [Multi-domain]  Cd Length: 245  Bit Score: 209.34  E-value: 5.42e-67
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   1 MRVTQGMIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNI 80
Cdd:COG1344   1 MRISTNMSALNALRNLNRTQSDLAKLQEQLSSGKRINSASDDPAGAAIALRLRSQIRGLEQYQRNANDAISRLQTAEGAL 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  81 TEGIDILSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIANTQ-VNGRYIFNGTNSDKPPVTDNGdgtytisdta 159
Cdd:COG1344  81 GEITDILQRARELAVQAANGTLSDEDRAAIAAELEQLLDQLLSIANTTdFNGRYLFAGTATDTPPFQVDY---------- 150

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593 160 dvvvnisnnmslkvnsdpksafggtsesgqnvfemldsfekalnSGSLDGMDSVLNDIDHFSDGMSAERSDLGARYNRLE 239
Cdd:COG1344 151 --------------------------------------------QGDAGQRTAALGALDAALDNVSSARAELGARQNRLE 186

                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 16080593 240 LVNTRLSAQEETATKVLSDNEDVELEEVITEFIAQQSVHRATLAVNAQIVQPTLIDFLK 298
Cdd:COG1344 187 SAINNLSDLSENLTAALSRLEDADMAEAITRLTKLQTLLQAALAALAQANQLSLLDLLR 245
Flagellin_N pfam00669
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial ...
 7-140 1.09e-21

Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700.


Pssm-ID: 425809 [Multi-domain]  Cd Length: 139  Bit Score: 88.55  E-value: 1.09e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593     7 MIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNITEGIDI 86
Cdd:pfam00669   5 SAALAARSNLNKNQAELSKAQERLSTGLRINSALDDAAGLAISVSLRAQIAGLSQAVRNNSLGIGRLQTAQGALSEVTDI 84

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 16080593    87 LSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIAN-TQVNGRYIFNGTNS 140
Cdd:pfam00669  85 LQRMKELAVQASNGGNSDIDRASIQAEIQQLTDELNNIANtTSFNGEYLLAGINT 139
 
Name Accession Description Interval E-value
flgL PRK07701
flagellar hook-associated protein FlgL; Validated
 1-298 1.00e-162

flagellar hook-associated protein FlgL; Validated


Pssm-ID: 181087 [Multi-domain]  Cd Length: 298  Bit Score: 454.07  E-value: 1.00e-162
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593    1 MRVTQGMIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNI 80
Cdd:PRK07701   1 MRVTQNMLANNFLRNINSNLEKLDKYQEQLSTGKKITRPSDDPVVAMKSLRYRTDLAEVEQYQKNASDAKSWLENTESAL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   81 TEGIDILSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIANTQVNGRYIFNGTNSDKPPVTDNGDGTYTISDTAD 160
Cdd:PRK07701  81 DQATDILQRARELAVQAANGTNTQTDRQAIAQEIEQLKEQLIQIANTQYNGRYIFNGTKTDTPPVTDDGDNIENSTDSGD 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  161 VVVNISNNMSLKVNSDPKSAFGGTSESGQNVFEMLDSFEKALNSGSLDGMDSVLNDIDHFSDGMSAERSDLGARYNRLEL 240
Cdd:PRK07701 161 IEFEIAKGNTINVNVPGDKAFGGQSGGGSNLFEMLDNLENALDSGDTQGVSNLLSDIDQHIDNVLAVRAELGARSNRLEL 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 16080593  241 VNTRLSAQEETATKVLSDNEDVELEEVITEFIAQQSVHRATLAVNAQIVQPTLIDFLK 298
Cdd:PRK07701 241 IENRLSDQEVNATKLLSDNEDVDLAEVITDLKTQENVYRAALAVGARIIQPSLVDFLR 298
flagell_flgL TIGR02550
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ...
 2-297 3.01e-96

flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274195 [Multi-domain]  Cd Length: 306  Bit Score: 286.17  E-value: 3.01e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593     2 RVTQGMIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNIT 81
Cdd:TIGR02550   1 RVSTNMLYNNSLNSITNNQSRLAKLQQQLSSGKRINKPSDDPVAAAQALNLNQELAQLEQYQKNIDDAKNWLSQTETALS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593    82 EGIDILSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIANTQ-VNGRYIFNGTNSDKPPVTDNGDGTYTI-SDTA 159
Cdd:TIGR02550  81 SVGDVLQRARELAVQAANGTLSDDDRKAIAKEIKQLLDQLVNLANTKdGNGRYIFSGTKTDTPPFSEDEGGEVTYnGDGG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   160 DVVVNISNNMSLKVNSDPKSAFGGTSESGQNVF-------EMLDSFEKALNSGS-LDGMDSVLNDIDHFSDGMSAERSDL 231
Cdd:TIGR02550 161 QRKVQVASNRSMPIGHPGDKVFMSIPNNDKSVFstgddliDALKKLEDALSSGDaKAALSASLNDLDKALDNVLSARAEV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16080593   232 GARYNRLELVNTRLSAQEETATKVLSDNEDVELEEVITEFIAQQSVHRATLAVNAQIVQPTLIDFL 297
Cdd:TIGR02550 241 GARLNRLENLNSRLSEQKLQLTEQLSDLEDVDLAEAISDLNMQQAALQAALKTFAKIQQLSLFDYL 306
FlgL COG1344
Flagellin and related hook-associated protein FlgL [Cell motility];
1-298 5.42e-67

Flagellin and related hook-associated protein FlgL [Cell motility];


Pssm-ID: 440955 [Multi-domain]  Cd Length: 245  Bit Score: 209.34  E-value: 5.42e-67
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   1 MRVTQGMIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNI 80
Cdd:COG1344   1 MRISTNMSALNALRNLNRTQSDLAKLQEQLSSGKRINSASDDPAGAAIALRLRSQIRGLEQYQRNANDAISRLQTAEGAL 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  81 TEGIDILSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIANTQ-VNGRYIFNGTNSDKPPVTDNGdgtytisdta 159
Cdd:COG1344  81 GEITDILQRARELAVQAANGTLSDEDRAAIAAELEQLLDQLLSIANTTdFNGRYLFAGTATDTPPFQVDY---------- 150

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593 160 dvvvnisnnmslkvnsdpksafggtsesgqnvfemldsfekalnSGSLDGMDSVLNDIDHFSDGMSAERSDLGARYNRLE 239
Cdd:COG1344 151 --------------------------------------------QGDAGQRTAALGALDAALDNVSSARAELGARQNRLE 186

                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 16080593 240 LVNTRLSAQEETATKVLSDNEDVELEEVITEFIAQQSVHRATLAVNAQIVQPTLIDFLK 298
Cdd:COG1344 187 SAINNLSDLSENLTAALSRLEDADMAEAITRLTKLQTLLQAALAALAQANQLSLLDLLR 245
flgL PRK07192
flagellar hook-associated protein FlgL; Reviewed
 1-297 6.68e-45

flagellar hook-associated protein FlgL; Reviewed


Pssm-ID: 235956 [Multi-domain]  Cd Length: 305  Bit Score: 154.41  E-value: 6.68e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593    1 MRVTQGMIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNI 80
Cdd:PRK07192   1 MRISTNTLYSTMLRSIQQLQAGLGKLQQQMSTGKRILTPSDDPIASARLLELSREQSNNSQYADNIANLSNSLNNQEGHL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   81 TEGIDILSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIANTQ-VNGRYIFNGTNSDKPPVTDNGDG-TYTISDT 158
Cdd:PRK07192  81 SGVNDQLQSIRSLLVAAGNGSLSDEDRSAMATELRSMLDSLLGLANAKdSEGNYLFSGTASNTQPITFDAAGgTYTYNGN 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  159 ADV-VVNISNNMSLKVNSDPKSAFGGtseSGQNVFEMLDSFEKALNSGSLD--------GMDSVLNDIDHFSDGMSAERS 229
Cdd:PRK07192 161 SDQrQVQVGEGVQMPVNVTGQSVFQG---GGLDVFNTLDKLIDLLETPALPaadaaltaAVDEALGAIDDALDNVLTVRT 237

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16080593  230 DLGARYNRLELVNTRLSAQEETATKVLSDNEDVELEEVITEFIAQQSVHRATLAVNAQIVQPTLIDFL 297
Cdd:PRK07192 238 ELGSRQNELDLLDGNHEDRKLQYQKILSDLQDLDYAEALSDLSNQMAALEAAQKTFVKINSLSLFNLI 305
flgL PRK08870
flagellar hook-associated protein FlgL; Reviewed
 1-297 2.69e-39

flagellar hook-associated protein FlgL; Reviewed


Pssm-ID: 236345 [Multi-domain]  Cd Length: 404  Bit Score: 141.97  E-value: 2.69e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593    1 MRVTQGMIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNI 80
Cdd:PRK08870   1 MRISTAQMYQQSVNSMLDQQSQLSQLQQQLSSGKKLLTPSDDPVAAAQAVNLSQQSALLDQYTKNINLARNRLQQEESTL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   81 TEGIDILSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIANTQ-VNGRYIFNGTNSDKPPVTDNGDGTYT----- 154
Cdd:PRK08870  81 GSVEDLLQRARELVVQAGNGSLSDSDRQAIATELQGLRDQLLNLANSKdGSGNYLFAGTQSGTQPFAFDASGNVVysgdq 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  155 ------ISDTADVVVNIS-------------------------------------------------------------- 166
Cdd:PRK08870 161 gqrqvqVADSVQVATNDPgdevfmsvpngggdyvpnanasntgtgllgsasitdpsdpvngdtytitftdngaggtntyv 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  167 ----------------------NNMSLKVNSDPKS--AFGGTSESGQNVFEMLDSFEKALNSGSL---------DGMDSV 213
Cdd:PRK08870 241 tdsstgtvvtaqaydagqpinfNGVEVQISGAPAAgdSFTLTPAPQASIFDTLDDAIAALESPVStpaadaalqNALAQA 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  214 LNDIDHFSDGMSAERSDLGARYNRLELVNTRLSAQEETATKVLSDNEDVELEEVITEFIAQQSVHRATLAVNAQIVQPTL 293
Cdd:PRK08870 321 LRNLDNALNNVLTARASVGARLNELDSAEAVHEDNKLQNTSALSDLEDLDYASAISEFELQQAALQAAQQAFSKVQSLSL 400


                 ....
gi 16080593  294 IDFL 297
Cdd:PRK08870 401 FNYI 404
PRK06663 PRK06663
flagellar hook-associated protein 3;
1-298 1.47e-36

flagellar hook-associated protein 3;


Pssm-ID: 180648 [Multi-domain]  Cd Length: 419  Bit Score: 134.81  E-value: 1.47e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593    1 MRVTQGMIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNI 80
Cdd:PRK06663   2 MRVSHPMQYNNLKSSLRRQESKMTKLQNQLSTGQRIQKLRDDPTAATHSIRYKSRLFKLDRYQKNIDDGKDRLRYAEGYL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   81 TEGIDILSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIANTQ-VNGRYIFNGTNSDKPP--------------- 144
Cdd:PRK06663  82 QSITNILQRARELAVQGANGTYQADDKKKIAKEIDELLEDLVDIANARgADGYSIFSGTKIDTEPfevirgnikglqgda 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  145 -------VTDNGD-------------------------------------GTYTIS-----------------DTADVVV 163
Cdd:PRK06663 162 gsnqiigVEYNGDigeqnreiengiyipvnypgnkvfwgtnqsiissvdaSGYVVKedqkiyidgveihlsagDTIDDII 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  164 ---------------NISNNMSLK-----------------------VNSD----PKSAFGGTSESGQNVFEMLDSFEKA 201
Cdd:PRK06663 242 akindssapvkasldPVLNSISLKtttphqiwledeeggtvlqdlglITNAtkepPYNYSNSAEVSGRSIFDSLIQLRDA 321

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  202 LNSGSLDGMDS-VLNDIDHFSDGMSAERSDLGARYNRLELVNTRLSAQEETATKVLSDNEDVELEEVITEFIAQQSVHRA 280
Cdd:PRK06663 322 LLNNDQELIGGrALGEIDEALDNLLTTLADLGAKENRLDRSYARISKEKLDMTEALSKNEDIDVTEAITNLNMLELAHQA 401

                        410
                 ....*....|....*...
gi 16080593  281 TLAVNAQIVQPTLIDFLK 298
Cdd:PRK06663 402 SLGVSGKIMQPTLLDFLR 419
flgL PRK12717
flagellar hook-associated protein 3;
1-190 1.80e-33

flagellar hook-associated protein 3;


Pssm-ID: 171679 [Multi-domain]  Cd Length: 523  Bit Score: 128.32  E-value: 1.80e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593    1 MRVTQGMIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNI 80
Cdd:PRK12717   1 MRISTSQFYESSAANYQRNYSNLVKTQEQASSGIRIQTAADDPVGAARLLQLQQQQAMLDQYSGNITTIKNSLTQEESTL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   81 TEGIDILSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIANTQ-VNGRYIFNGTNSDKPPVTDNGDGTYTIS-DT 158
Cdd:PRK12717  81 TSINDTLQRARELAVSAGNGGLTDADRKAIASELKQIEAQLLGLMNSKdANGQYLFAGSKSDTPPYVRNADGTYSYQgDQ 160

                        170       180       190
                 ....*....|....*....|....*....|..
gi 16080593  159 ADVVVNISNNMSLKVNSDPKSAFGGTSESGQN 190
Cdd:PRK12717 161 TQLSLQVGDTLNLAANDTGYSAFEQAVNTSRT 192
flgL PRK08073
flagellar hook-associated protein 3;
22-297 1.89e-32

flagellar hook-associated protein 3;


Pssm-ID: 181222 [Multi-domain]  Cd Length: 287  Bit Score: 121.24  E-value: 1.89e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   22 KLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNITEGIDILSKVRELAVEAQNDT 101
Cdd:PRK08073  22 QQQYHRNQVTSGKKNLSMSEDPLAASKSFAIQHSLANIEQMQKDVADSKNVLNQTENTLSGMSKSLTRVDQLVLQALNGT 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  102 NGEPERQAIGVEVKQLKEQLLNIANTQVNGRYIFNGTNSDKPPVTDngDGTYTiSDTADVVVNISNNMSLKVnsdpksaF 181
Cdd:PRK08073 102 NDEKELKAIGAEIDQILKQVVYLANTKEQGRYVFGGDSAEKKPFTE--DGTYQ-GGTEDVNWRLNDGYEVKA-------F 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  182 GGTSESGQNVFEMLDSFEKALNSGSLDGMDSVLNDIDHFSDGMSAERSDLGARYNRLELVNTRLSAQEETATKVLSDNED 261
Cdd:PRK08073 172 RNGEALLTPVINTLKKMVDAMQTGDQKALQPLLEENKKNLDIIINRTTEVGGTMNTVETFKTILSEQNLALQENRKEIED 251

                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 16080593  262 VELEEVITEFIAQQSVHRATLAVNAQIVQPTLIDFL 297
Cdd:PRK08073 252 VDLAVAISDLAYINATYEATLKAVSTMSKTSILDYM 287
flgL PRK08412
flagellar hook-associated protein FlgL; Validated
 1-184 3.32e-28

flagellar hook-associated protein FlgL; Validated


Pssm-ID: 236261 [Multi-domain]  Cd Length: 827  Bit Score: 114.15  E-value: 3.32e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593    1 MRVTQGMIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNI 80
Cdd:PRK08412   1 MRVTFGSKYNQMNNYQNALQNKLNDVNTQIASGLKIQYGYQDSDVYNQNLKLQYEENTLDQGIDVASSAYTFTLNTDKAL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   81 TEGIDILSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIANTQVNGRYIFNGTNSDKPPVTDNgdGTYTISDtAD 160
Cdd:PRK08412  81 NEFSKTMEAFKTKLIQAANDVHSETSREAIANDLEALKEHMINLANTSIGGEFLFSGSKVDTKPIDSN--GTYHGND-ED 157

                        170       180
                 ....*....|....*....|....
gi 16080593  161 VVVNISNNMSLKVNSDPKSAFGGT 184
Cdd:PRK08412 158 LNALVGSGNLVPYNISGQELFLGK 181
flgL PRK08027
flagellar hook-filament junction protein FlgL;
1-281 3.78e-27

flagellar hook-filament junction protein FlgL;


Pssm-ID: 181202 [Multi-domain]  Cd Length: 317  Bit Score: 107.53  E-value: 3.78e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593    1 MRVTQGMIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQY---KSNASQAFTWLENTE 77
Cdd:PRK08027   1 MRLSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYtlaRTFATQKVSLEESVL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   78 TNITEGIdilSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIAN-TQVNGRYIFNGTNSDKPP-VTDNGD---GT 152
Cdd:PRK08027  81 SQVTTAI---QNAQEKIVYAGNGTLSDDDRASLATDLQGLRDQLLNLANtTDGNGRYIFAGYKTDKAPfDEATGGyvgGT 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  153 YTISDTAD-----VVVNISNNMSLKVNSDP-KSAFGGTSESgqNVFEMLDSFEKALNSgSLDGMDSVLND----IDHFSD 222
Cdd:PRK08027 158 ESITQQVDaarsmVIGHTGDQIFDSITSNAvPEPDGSASET--NLFAMLDSAIAALKT-PVAGSDADKETaaaaLDKTNR 234

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16080593  223 GM-------SAERSDLGARYNRLELVNTRLSAQEETATKVLSDNEDVELEEVITEFIAQQSVHRAT 281
Cdd:PRK08027 235 GLknslnnvLTVRAELGTQLNELESLDSLGSDRALGQKQQMSDLVDVDWNSAISSYVMQQAALQAS 300
PRK12804 PRK12804
flagellin; Provisional
 1-290 1.64e-24

flagellin; Provisional


Pssm-ID: 183759 [Multi-domain]  Cd Length: 301  Bit Score: 100.07  E-value: 1.64e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593    1 MRVTQGMIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNI 80
Cdd:PRK12804   1 MRINHNIAALNTLNRLSANNGASQKNMEKLSSGLKINRAGDDAAGLAISEKMRGQIRGLEMASKNAQDGISLIQTAEGAL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   81 TEGIDILSKVRELAVEAQND-TNGEPERQAIGVEVKQLKEQLLNIAN-TQVNGRYIFNGTNSDKPPVTDNGDGTYTI--S 156
Cdd:PRK12804  81 TETHSILQRVRELVVQAGNTgTQDGTDLGAIQDEIKALVDEIDGISDrTEFNGKKLLDGTFKPAAPAAGTKSLTFQIgaN 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  157 DTADVVVNISNNMSLKVNSDPKsafGGTSESGQNVFEM-LDSFEKALNSGSLdGMDSVLNDIDHFSDGMSAERSDLGARY 235
Cdd:PRK12804 161 AAQQLSVNIEAMSADALGVKDT---DGTLVTGKSVSDIdVTKFANAAAAADG-GFDDQLKIVDGAIKQVSDQRSKLGAVQ 236

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 16080593  236 NRLELVNTRLSAQEETATKVLSDNEDVELEEVITEFIAQQSVHRATLAVNAQIVQ 290
Cdd:PRK12804 237 NRLEHTINNLGASGENLTAAESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQ 291
Flagellin_N pfam00669
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial ...
 7-140 1.09e-21

Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700.


Pssm-ID: 425809 [Multi-domain]  Cd Length: 139  Bit Score: 88.55  E-value: 1.09e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593     7 MIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNITEGIDI 86
Cdd:pfam00669   5 SAALAARSNLNKNQAELSKAQERLSTGLRINSALDDAAGLAISVSLRAQIAGLSQAVRNNSLGIGRLQTAQGALSEVTDI 84

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 16080593    87 LSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIAN-TQVNGRYIFNGTNS 140
Cdd:pfam00669  85 LQRMKELAVQASNGGNSDIDRASIQAEIQQLTDELNNIANtTSFNGEYLLAGINT 139
PRK12802 PRK12802
flagellin; Provisional
 16-287 9.40e-19

flagellin; Provisional


Pssm-ID: 139237 [Multi-domain]  Cd Length: 282  Bit Score: 84.16  E-value: 9.40e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   16 IGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNITEGIDILSKVRELAV 95
Cdd:PRK12802  18 LSRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRQTSQIRGQTQAIKNANDGISIAQTAEGALQESTNILQRMRELAV 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   96 EAQNDTNGEPERQAIGVEVKQLKEQLLNIAN-TQVNGRYIFNGTnsdkppvtdNGDGTYTISDTADVVVNISNNMSLKVN 174
Cdd:PRK12802  98 QSRNDSNDSTDRAALNKEFTTMLDEITRIATsTTLNGKNLLDGS---------AGTMTFQVGANTGQSNQITFGLSASFD 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  175 SDPKSAFGGTSESGQNVFEMLDSFEKAlnsgsLDGMDSVLNDIDHFsdgmsaeRSDLGARYNRLELVNTRLSAQEETATK 254
Cdd:PRK12802 169 ATGLGVGSGTLITGADSAAAETNAQAA-----ITAIDAALQTINTT-------RADLGAAQNRLQSTISNLQNINENASA 236

                        250       260       270
                 ....*....|....*....|....*....|...
gi 16080593  255 VLSDNEDVELEEVITEFIAQQSVHRATLAVNAQ 287
Cdd:PRK12802 237 ARGRVQDTDFAAETAQLTKQQTLQQASTSVLAQ 269
PRK14692 PRK14692
flagellar hook-associated protein FlgL;
1-150 1.40e-16

flagellar hook-associated protein FlgL;


Pssm-ID: 173155 [Multi-domain]  Cd Length: 749  Bit Score: 80.00  E-value: 1.40e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593    1 MRVTQGMIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNI 80
Cdd:PRK14692   1 MRITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQVKESTSRAQEMTQNSMKAL 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   81 TEGIDILSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIANTQVNGRYIFNGTNSDKPPVTDNGD 150
Cdd:PRK14692  81 QDMVKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIVQLANTSVNGQYLFAGSQVANKPFDSNGN 150
PRK12807 PRK12807
flagellin; Provisional
 1-290 8.11e-15

flagellin; Provisional


Pssm-ID: 171737 [Multi-domain]  Cd Length: 287  Bit Score: 72.93  E-value: 8.11e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593    1 MRVTQGMIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNI 80
Cdd:PRK12807   1 MRINTNINSMRTQEYMRQNQDKMNVSMNRLSSGKRINSAADDAAGLAIATRMRARQSGLEKASQNTQDGMSLIRTAESAM 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   81 TEGIDILSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIA-NTQVNGRYIFNGTNSDKPPVTDNGDGTYTISDT- 158
Cdd:PRK12807  81 NSVSNILTRMRDIAVQSSNGTNTAENQSALQKEFAELQEQIDYIAkNTEFNDKNLLAGTGAVTIGSTSISGAEISIETLd 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  159 ---ADVVVNIS----NNMSLKVNSDPKSAfggTSESGQNVFEMLDSFEKALNSgsldgmdsvlndidhfsdgMSAERSDL 231
Cdd:PRK12807 161 ssaTNQQITIKlantTAEKLGIDATTSNI---SISGAASALAAISALNTALNT-------------------VAGNRATL 218

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 16080593  232 GARYNRLELVNTRLSAQEETATKVLSDNEDVELEEVITEFIAQQSVHRATLAVNAQIVQ 290
Cdd:PRK12807 219 GATLNRLDRNVENLNNQATNMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQ 277
flgL PRK12718
flagellar hook-associated protein FlgL; Provisional
 1-150 1.35e-14

flagellar hook-associated protein FlgL; Provisional


Pssm-ID: 79176 [Multi-domain]  Cd Length: 510  Bit Score: 73.69  E-value: 1.35e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593    1 MRVTQGMIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNI 80
Cdd:PRK12718   1 MRLSTALIYQNGLNGVLNQEAAMARLQEQLSSGRRVLTPADDPLAAALAVNVSQTSSMNSNYDANRKQAEQALGAQTNTL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   81 TEGIDILSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIAN-TQVNGRYIFNGTNSDKPP---------VTDNGD 150
Cdd:PRK12718  81 QSVVKNMQEMLKRVVEAGNGTMSDADRQALVIALKGAREELVGLANaTDGNGQYLFSGYKGFTQPysfdaatgkVTYNGD 160
PRK08869 PRK08869
polar flagellin E;
14-138 2.24e-13

polar flagellin E;


Pssm-ID: 236344 [Multi-domain]  Cd Length: 376  Bit Score: 69.57  E-value: 2.24e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   14 RYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNITEGIDILSKVREL 93
Cdd:PRK08869  15 RNLNGATSALSQSMERLSSGKRINSAKDDAAGLQISNRLTTQIRGLDVAVRNANDGISIAQTAEGAMNETTNILQRMRDL 94

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 16080593   94 AVEAQNDTNGEPERQAIGVEVKQLKEQLLNIAN-TQVNGRYIFNGT 138
Cdd:PRK08869  95 SLQSANGSNSASDRQALQEEVTALNDELNRIAEtTSFGGTKLLNGS 140
PRK12803 PRK12803
flagellin; Provisional
 11-126 3.40e-13

flagellin; Provisional


Pssm-ID: 183758 [Multi-domain]  Cd Length: 335  Bit Score: 69.07  E-value: 3.40e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   11 NSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNITEGIDILSKV 90
Cdd:PRK12803  11 NASRNNSINAANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKAINFIQTTEGNLNEVEKVLVRM 90

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 16080593   91 RELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIAN 126
Cdd:PRK12803  91 KELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIAD 126
PRK12806 PRK12806
flagellin; Provisional
 11-140 8.48e-13

flagellin; Provisional


Pssm-ID: 183761 [Multi-domain]  Cd Length: 475  Bit Score: 68.18  E-value: 8.48e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   11 NSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNITEGIDILSKV 90
Cdd:PRK12806  13 TAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQAVRNANDGISLAQVAEGAMQETTNILQRM 92

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 16080593   91 RELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIA-NTQVNGRYIFNGTNS 140
Cdd:PRK12806  93 RELSVQAANSTNNSSDRASIQSEISQLKSELERIAqNTEFNGQRILDGSFS 143
flgL PRK08913
flagellin;
21-297 3.05e-11

flagellin;


Pssm-ID: 236349 [Multi-domain]  Cd Length: 301  Bit Score: 62.88  E-value: 3.05e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   21 SKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNITEGIDILSKVRELAVEAQND 100
Cdd:PRK08913  23 QTMASLQIQESSGLKSESFAGLGADAQQAVNLQVSVTRAQSYIDAATLAQSKVQVMYSAVGQIADLAQQLRSSLSAASTG 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  101 TNGEPErqAIGVEVKQLKEQLLNIANTQVNGRYIFNGTNSDKPPV---TDNGDGTYTISDTADVVVNISNNMSLKVNSDP 177
Cdd:PRK08913 103 TSTDAT--SAAASAQQALTQLATLLNTQYGGQYVFAGADTTTAPVdlsSFAAGADSASSADTSYYQGDDTLTSVRVSATQ 180

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  178 KSAFGGTSESG--QNVFEMLdSFEKALNSGSLDGMDSVLNDIDHFSDGMSAERSDLGARYNRLELVNTRLSAQEETATKV 255
Cdd:PRK08913 181 GVSYGVTADNSafEQLMRAL-MLVANSSSLSSSTLSQALDLASTAVDDLGDVQSRLGNAASRLTAASSRQTEYKSFAETL 259

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 16080593  256 LSDNEDVELEEVITEFIAQQSVHRATLAVNAQIVQPTLIDFL 297
Cdd:PRK08913 260 LSDLTGVDVAAVTAQLSTYQTQLTASYSAISKMKSLNLASYL 301
flgL PRK06008
flagellar hook-associated family protein;
10-160 1.21e-07

flagellar hook-associated family protein;


Pssm-ID: 235669 [Multi-domain]  Cd Length: 348  Bit Score: 52.31  E-value: 1.21e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   10 QNSLRY-IGSSYSKLDKLQSQISSGKKIskasdDPVVAM-----KSLKYNTQLSQVQQYKSNASQAFTWLENTETNITEG 83
Cdd:PRK06008  12 QNALRLtIAKLQAELSKAQTEATTGRYA-----DVGLSLgsktaRSVSLRREYDRLASLTDSNSLVTQRLTATQTALGQI 86

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16080593   84 IDILSKVRELAVEAQNDTNGEPERQAigvEVKQLKEQLLNIANTQVNGRYIFNGTNSDKPPVTDNGDGTYTISDTAD 160
Cdd:PRK06008  87 IEAAQSFLNDLLAANSSAQTAATVAQ---SARSALSSLTSTLNTSVNGEYLFAGINTDVKPLTDYGAPGSAAKTAVD 160
PRK12805 PRK12805
FliC/FljB family flagellin;
1-290 1.76e-07

FliC/FljB family flagellin;


Pssm-ID: 183760 [Multi-domain]  Cd Length: 287  Bit Score: 51.41  E-value: 1.76e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593    1 MRVTQGMIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNI 80
Cdd:PRK12805   1 MKVNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAASKNSSMGIDLLQTADSAL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   81 TEGIDILSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIANTQvngryifNGTNSDKPPVTDNGDGTYT---ISD 157
Cdd:PRK12805  81 SSMSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKELDHVADTT-------NYNNIKLLDQTATGAATQVsiqASD 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  158 TADVVVNISNNMSLKVNSDPKSAFGGTSESGQNVFEMLDSfekalnsgslDGMDSVLNDIDHFSDGMSAERSDLGARYNR 237
Cdd:PRK12805 154 KANDLINIDLFNAKGLSAGTITLGSGSTVAGYSALSVADA----------DSSQEATEAIDELINNISNGRALLGAGMSR 223

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 16080593  238 LELVNTRLSAQEETATKVLSDNEDVELEEVITEFIAQQSVHRATLAVNAQIVQ 290
Cdd:PRK12805 224 LSYNVSNVNNQSIATKASASSIEDADMAAEMSEMTKYKILTQTSISMLSQANQ 276
PRK13588 PRK13588
flagellin B; Provisional
 29-142 1.34e-06

flagellin B; Provisional


Pssm-ID: 237440 [Multi-domain]  Cd Length: 514  Bit Score: 49.48  E-value: 1.34e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   29 QISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNITEGIDILSKVRELAVEAQNDTNGEPERQ 108
Cdd:PRK13588  31 KLSSGLRINKAADDASGMAIADSLRSQSANLGQAIRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRR 110

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 16080593  109 AIGVEVKQLKEQLLNIAN-TQVNGRYIFNGTNSDK 142
Cdd:PRK13588 111 ALQSDIQRLLEELDNIANtTSFNGQQMLSGSFSNK 145
PRK13589 PRK13589
flagellin A;
22-137 1.73e-06

flagellin A;


Pssm-ID: 172158 [Multi-domain]  Cd Length: 576  Bit Score: 49.26  E-value: 1.73e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   22 KLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNITEGIDILSKVRELAVEAQNDT 101
Cdd:PRK13589  24 ELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQAINNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQDG 103

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 16080593  102 NGEPERQAIGVEVKQLKEQLLNIAN-TQVNGRYIFNG 137
Cdd:PRK13589 104 QSLKTRTMLQADINRLMEELDNIANtTSFNGKQLLSG 140
PRK12808 PRK12808
flagellin; Provisional
 11-156 1.28e-05

flagellin; Provisional


Pssm-ID: 237212 [Multi-domain]  Cd Length: 476  Bit Score: 46.49  E-value: 1.28e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   11 NSLR---YIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNITEGIDIL 87
Cdd:PRK12808   8 NSMRtqeYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAMNSVSNIL 87

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   88 SKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIA-NTQVNGRYIFNGTNSDKPPVTDNGDGTYTIS 156
Cdd:PRK12808  88 LRMRDIANQSANGTNTDKNQAALQKEFAELQKQITYIAdNTQFNDKNLLNSNSSINIQTLDSSDGDKQIG 157
PRK08411 PRK08411
flagellin; Reviewed
 23-137 1.46e-05

flagellin; Reviewed


Pssm-ID: 236260 [Multi-domain]  Cd Length: 572  Bit Score: 46.14  E-value: 1.46e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   23 LDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNITEGIDILSKVRELAVEAQNDTN 102
Cdd:PRK08411  25 LDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQ 104

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 16080593  103 GEPERQAIGVEVKQLKEQLLNIAN-TQVNGRYIFNG 137
Cdd:PRK08411 105 SLKTRTMLQADINRLMEELDNIANtTSFNGKQLLSG 140
PRK12584 PRK12584
flagellin A; Reviewed
 4-142 1.96e-05

flagellin A; Reviewed


Pssm-ID: 237146 [Multi-domain]  Cd Length: 510  Bit Score: 45.67  E-value: 1.96e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593    4 TQGMIQQNSLRyigssySKLDKLqsqiSSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNITEG 83
Cdd:PRK12584  16 VQSALTQNALK------TSLEKL----SSGLRINKAADDASGMTIADSLRSQASSLGQAIANTNDGMGIIQVADKAMDEQ 85

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   84 IDILSKVRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNIAN-TQVNGRYIFNGTNSDK 142
Cdd:PRK12584  86 LKILDTIKVKATQAAQDGQTTESRKAIQSDIVRLIQGLDNIGNtTTYNGQALLSGQFTNK 145
PRK06819 PRK06819
FliC/FljB family flagellin;
10-131 3.17e-05

FliC/FljB family flagellin;


Pssm-ID: 235867 [Multi-domain]  Cd Length: 376  Bit Score: 44.77  E-value: 3.17e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   10 QNSLryiGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSLKYNTQLSQVQQYKSNASQAFTWLENTETNITEGIDILSK 89
Cdd:PRK06819  15 QNNL---NKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISIAQTTEGALNEINNNLQR 91

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 16080593   90 VRELAVEAQNDTNGEPERQAIGVEVKQLKEQLLNI-ANTQVNG 131
Cdd:PRK06819  92 VRELTVQAQNGSNSSSDLDSIQDEISQRLAEIDRVsDQTQFNG 134
Flagellin_C pfam00700
Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial ...
 214-297 2.44e-04

Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial flagella. There is some similarity between this family and pfam00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate and this is shown to be correct as structurally this family forms an extended helix that interacts with pfam00700.


Pssm-ID: 425827 [Multi-domain]  Cd Length: 86  Bit Score: 39.24  E-value: 2.44e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593   214 LNDIDHFSDGMSAERSDLGARYNRLELVNTRLSAQEETATKVLSDNEDVELEEVITEFIAQQSVHRATLAVNAQI--VQP 291
Cdd:pfam00700   1 LDLIDEAITDLDSVRADLGAVQNRLESATTNLNNQQDNLKAAISRIEDVDPAEESTRMTKLQIQIQASYSLLSQAnqLPQ 80


                  ....*.
gi 16080593   292 TLIDFL 297
Cdd:pfam00700  81 SLLNLL 86
PRK14692 PRK14692
flagellar hook-associated protein FlgL;
209-297 2.80e-04

flagellar hook-associated protein FlgL;


Pssm-ID: 173155 [Multi-domain]  Cd Length: 749  Bit Score: 42.26  E-value: 2.80e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16080593  209 GMDSVLNDIDHFSDGMSAERSDLGARYNRLELVNTRLSAQEETATKVLSDNEDVELEEVITEFIAQQSVHRATLAVNAQI 288
Cdd:PRK14692 661 GMQGALERLDHLADHVSKLNTTMGAYHNTIEGVNTRTSFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKASTTI 740


                 ....*....
gi 16080593  289 VQPTLIDFL 297
Cdd:PRK14692 741 SQLSLLNYM 749
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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